Citrus Sinensis ID: 005177
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 710 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FII5 | 1041 | Leucine-rich repeat recep | no | no | 0.502 | 0.342 | 0.479 | 1e-90 | |
| Q9SHI2 | 1101 | Leucine-rich repeat recep | no | no | 0.871 | 0.562 | 0.305 | 6e-83 | |
| Q9M0G7 | 1013 | Leucine-rich repeat recep | no | no | 0.839 | 0.588 | 0.307 | 8e-80 | |
| Q9FRS6 | 1029 | Leucine-rich repeat recep | no | no | 0.564 | 0.389 | 0.396 | 3e-79 | |
| C0LGV1 | 1135 | LRR receptor-like serine/ | no | no | 0.852 | 0.533 | 0.293 | 5e-75 | |
| Q9SYQ8 | 980 | Receptor protein kinase C | no | no | 0.512 | 0.371 | 0.432 | 5e-74 | |
| C0LGF5 | 1072 | Probable LRR receptor-lik | no | no | 0.857 | 0.568 | 0.311 | 7e-74 | |
| O49545 | 1003 | Leucine-rich repeat recep | no | no | 0.518 | 0.366 | 0.422 | 3e-73 | |
| Q9LHP4 | 1141 | Receptor-like protein kin | no | no | 0.861 | 0.536 | 0.306 | 3e-72 | |
| O82318 | 960 | Probably inactive leucine | no | no | 0.538 | 0.397 | 0.412 | 4e-71 |
| >sp|Q9FII5|TDR_ARATH Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana GN=TDR PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 334 bits (857), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 173/361 (47%), Positives = 237/361 (65%), Gaps = 4/361 (1%)
Query: 43 NSLHDWFVPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNE 102
++ DW VP VN CSWSGV C+ V+ ++LS + LSG +P + +R +
Sbjct: 51 SAFQDWKVP--VNGQNDAVWCSWSGVVCDNVTAQVISLDLSHRNLSGRIPIQ-IRYLSSL 107
Query: 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFS 162
L NS G FP IF+LT L +LDISRN+F FP GI L+ L V +AFSN+F
Sbjct: 108 LYLNLSG-NSLEGSFPTSIFDLTKLTTLDISRNSFDSSFPPGISKLKFLKVFNAFSNNFE 166
Query: 163 GSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKT 222
G +P+++S+L L+ LN GSYF G IP+ +G + L+F+HLAGN+L ++P LG+L
Sbjct: 167 GLLPSDVSRLRFLEELNFGGSYFEGEIPAAYGGLQRLKFIHLAGNVLGGKLPPRLGLLTE 226
Query: 223 VTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLA 282
+ HMEIGYN + GNIP + +S ++Y D++ +LSGS+P+EL NL+ LE+LFLF+N
Sbjct: 227 LQHMEIGYNHFNGNIPSEFALLSNLKYFDVSNCSLSGSLPQELGNLSNLETLFLFQNGFT 286
Query: 283 GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPS 342
G++P +S + +LK LD S N+LSG IP F+ LKNL LSL+ N +SG VPE + +LP
Sbjct: 287 GEIPESYSNLKSLKLLDFSSNQLSGSIPSGFSTLKNLTWLSLISNNLSGEVPEGIGELPE 346
Query: 343 LEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFT 402
L LF+WNN F+G LP LG N KL +DVS N+F G+IP +C G L+KLILFSN F
Sbjct: 347 LTTLFLWNNNFTGVLPHKLGSNGKLETMDVSNNSFTGTIPSSLCHGNKLYKLILFSNMFE 406
Query: 403 G 403
G
Sbjct: 407 G 407
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Acts with CLE41p and CLE44p peptides as a ligand-receptor pair in a signal transduction pathway involved in the regulation of procambium maintenance and polarity during vascular-tissue development. Mediates repression of tracheary element differentiation and the promotion of procambial cells formation and polar division adjacent to phloem cells in the veins. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q9SHI2|Y1723_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS=Arabidopsis thaliana GN=At1g17230 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 309 bits (791), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 214/701 (30%), Positives = 347/701 (49%), Gaps = 82/701 (11%)
Query: 77 VVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNN 136
+V + L L G +P PL F++ L++S NS SG P +LI L + N
Sbjct: 381 LVDLQLFDNQLEGKIP--PLIGFYSNFSVLDMSANSLSGPIPAHFCRFQTLILLSLGSNK 438
Query: 137 FSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSF 196
SG+ P +++ ++L L N +GS+P E+ L++L L L ++ SG I + G
Sbjct: 439 LSGNIPRDLKTCKSLTKLMLGDNQLTGSLPIELFNLQNLTALELHQNWLSGNISADLGKL 498
Query: 197 KSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGAN 256
K+LE L LA N +IP E+G L + I N G+IP +LG+ +Q LD++G
Sbjct: 499 KNLERLRLANNNFTGEIPPEIGNLTKIVGFNISSNQLTGHIPKELGSCVTIQRLDLSGNK 558
Query: 257 LSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADL 316
SG I +EL L LE L L N+L G++P F +T L L L N LS IP L
Sbjct: 559 FSGYIAQELGQLVYLEILRLSDNRLTGEIPHSFGDLTRLMELQLGGNLLSENIPVELGKL 618
Query: 317 KNLRL-LSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTN 375
+L++ L++ +N +SGT+P+SL L LEIL++ +N SG +P ++G L ++S N
Sbjct: 619 TSLQISLNISHNNLSGTIPDSLGNLQMLEILYLNDNKLSGEIPASIGNLMSLLICNISNN 678
Query: 376 NFNGSIPPDICSGGVLFKLILFSNNFTG-------------------------------- 403
N G++P +F+ + S+NF G
Sbjct: 679 NLVGTVPDT-----AVFQR-MDSSNFAGNHGLCNSQRSHCQPLVPHSDSKLNWLINGSQR 732
Query: 404 -IVMFIAAALLGIFFFRRGGKGHWKMI----SFLGLPQFTANDVLRSF------------ 446
++ I ++G F W + +F+ L T DV+ S+
Sbjct: 733 QKILTITCIVIGSVFLITFLGLCWTIKRREPAFVALEDQTKPDVMDSYYFPKKGFTYQGL 792
Query: 447 -NSTE--CEEAARPQSAAGC--KAVLPTGITVSVKKIE---WGATRIKIVSEFITRIGTV 498
++T E+ + A G KA + G ++VKK+ GA+ I+ +G +
Sbjct: 793 VDATRNFSEDVVLGRGACGTVYKAEMSGGEVIAVKKLNSRGEGASSDNSFRAEISTLGKI 852
Query: 499 RHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKR-----DWAAKYKIVLGVARGLC 553
RH+N+++L GFCY+++ LLY+Y+ G+L E+++ DW A+Y+I LG A GLC
Sbjct: 853 RHRNIVKLYGFCYHQNSNLLLYEYMSKGSLGEQLQRGEKNCLLDWNARYRIALGAAEGLC 912
Query: 554 FLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTE---SGE 610
+LHHDC P I H D+K++NI+ DE + H+ +FG L L+ + +A + + E
Sbjct: 913 YLHHDCRPQIVHRDIKSNNILLDERFQAHVGDFGLAKLIDLSYSKSMSAVAGSYGYIAPE 972
Query: 611 FYNAMKEEMYMDVYGFGEIILEILTNG---RLTNAGSSLQN---KPIDGLLG--EMYNEN 662
+ MK D+Y FG ++LE++T + G L N + I ++ EM++
Sbjct: 973 YAYTMKVTEKCDIYSFGVVLLELITGKPPVQPLEQGGDLVNWVRRSIRNMIPTIEMFDAR 1032
Query: 663 EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 703
+ E+ LVL +AL CT ++P+ RP+M E + +++
Sbjct: 1033 LDTNDKRTVHEMSLVLKIALFCTSNSPASRPTMREVVAMIT 1073
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9M0G7|PXL2_ARATH Leucine-rich repeat receptor-like protein kinase PXL2 OS=Arabidopsis thaliana GN=PXL2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 298 bits (764), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 217/705 (30%), Positives = 350/705 (49%), Gaps = 109/705 (15%)
Query: 106 LNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSV 165
L+ S N+ +G+ P+EI L +L L++ RN SG P I SL L VL+ ++N+ SG +
Sbjct: 289 LDFSDNALTGEIPMEITKLKNLQLLNLMRNKLSGSIPPAISSLAQLQVLELWNNTLSGEL 348
Query: 166 PAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTH 225
P+++ + L+ L+++ + FSG IPS + +L L L N QIPA L +++
Sbjct: 349 PSDLGKNSPLQWLDVSSNSFSGEIPSTLCNKGNLTKLILFNNTFTGQIPATLSTCQSLVR 408
Query: 226 MEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQ----- 280
+ + N G+IP G + ++Q L++AG LSG IP ++S+ L + RNQ
Sbjct: 409 VRMQNNLLNGSIPIGFGKLEKLQRLELAGNRLSGGIPGDISDSVSLSFIDFSRNQIRSSL 468
Query: 281 -------------------LAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRL 321
++G+VP +F +L +LDLS N L+G IP S A + L
Sbjct: 469 PSTILSIHNLQAFLVADNFISGEVPDQFQDCPSLSNLDLSSNTLTGTIPSSIASCEKLVS 528
Query: 322 LSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSI 381
L+L N ++G +P + + +L +L + NN +G LPE++G + L ++VS N G +
Sbjct: 529 LNLRNNNLTGEIPRQITTMSALAVLDLSNNSLTGVLPESIGTSPALELLNVSYNKLTGPV 588
Query: 382 P---------PD-------ICSGGVL-----FKLILFSNN-----------FTGIVMFIA 409
P PD +C GGVL F+ S++ GI +A
Sbjct: 589 PINGFLKTINPDDLRGNSGLC-GGVLPPCSKFQRATSSHSSLHGKRIVAGWLIGIASVLA 647
Query: 410 AALLGIF-------FFRRG---------GKGHWKMISFLGLPQFTANDVLRSFNSTECEE 453
+L I ++ G G+ W++++F L FTA+D+L E
Sbjct: 648 LGILTIVTRTLYKKWYSNGFCGDETASKGEWPWRLMAFHRL-GFTASDILACIK--ESNM 704
Query: 454 AARPQSAAGCKAVLPTGITV-SVKKIEWGATRIK--IVSEFITRI---GTVRHKNLIRLL 507
+ KA + TV +VKK+ A I+ +F+ + G +RH+N++RLL
Sbjct: 705 IGMGATGIVYKAEMSRSSTVLAVKKLWRSAADIEDGTTGDFVGEVNLLGKLRHRNIVRLL 764
Query: 508 GFCYNRHQAYLLYDYLPNGNLSEKIRTKR-------DWAAKYKIVLGVARGLCFLHHDCY 560
GF YN ++Y+++ NGNL + I K DW ++Y I LGVA GL +LHHDC+
Sbjct: 765 GFLYNDKNMMIVYEFMLNGNLGDAIHGKNAAGRLLVDWVSRYNIALGVAHGLAYLHHDCH 824
Query: 561 PAIPHGDLKASNIVFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWTESGEFYN 613
P + H D+K++NI+ D N++ +A+FG K + GS+ IA E+
Sbjct: 825 PPVIHRDIKSNNILLDANLDARIADFGLARMMARKKETVSMVAGSY-GYIA----PEYGY 879
Query: 614 AMKEEMYMDVYGFGEIILEILTN--------GRLTNAGSSLQNKPIDGLLGEMYNENEVG 665
+K + +D+Y +G ++LE+LT G + ++ K D + E + VG
Sbjct: 880 TLKVDEKIDIYSYGVVLLELLTGRRPLEPEFGESVDIVEWVRRKIRDNISLEEALDPNVG 939
Query: 666 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPHGK 710
+ +Q+E+ LVL +ALLCT P DRPSM + + +L KP K
Sbjct: 940 NCRYVQEEMLLVLQIALLCTTKLPKDRPSMRDVISMLGEAKPRRK 984
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Involved in the regulation of procambium maintenance and polarity during vascular-tissue development. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FRS6|PXL1_ARATH Leucine-rich repeat receptor-like protein kinase PXL1 OS=Arabidopsis thaliana GN=PXL1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 296 bits (759), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 160/404 (39%), Positives = 246/404 (60%), Gaps = 3/404 (0%)
Query: 2 EIFHCLYLNLFIWLVFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIY 61
+F Y F FV + + + E LL+ KS+L D N+L DW P ++
Sbjct: 5 RLFFLFYYIGFALFPFVSSETFQNSEQEILLAFKSDLFDPSNNLQDWKRPENATTFSELV 64
Query: 62 ACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEI 121
C W+GV C+ N V + LS LSG + + F L L+LS+N+F P +
Sbjct: 65 HCHWTGVHCDANG-YVAKLLLSNMNLSGNVSDQIQS--FPSLQALDLSNNAFESSLPKSL 121
Query: 122 FNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181
NLTSL +D+S N+F G FP G+ L ++A SN+FSG +P ++ L+VL+
Sbjct: 122 SNLTSLKVIDVSVNSFFGTFPYGLGMATGLTHVNASSNNFSGFLPEDLGNATTLEVLDFR 181
Query: 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQL 241
G YF G +PS F + K+L+FL L+GN ++P +G L ++ + +GYN + G IP +
Sbjct: 182 GGYFEGSVPSSFKNLKNLKFLGLSGNNFGGKVPKVIGELSSLETIILGYNGFMGEIPEEF 241
Query: 242 GNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLS 301
G ++ +QYLD+A NL+G IP L L +L +++L++N+L G++P E +T+L LDLS
Sbjct: 242 GKLTRLQYLDLAVGNLTGQIPSSLGQLKQLTTVYLYQNRLTGKLPRELGGMTSLVFLDLS 301
Query: 302 DNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENL 361
DN+++G IP +LKNL+LL+LM N+++G +P + +LP+LE+L +W N GSLP +L
Sbjct: 302 DNQITGEIPMEVGELKNLQLLNLMRNQLTGIIPSKIAELPNLEVLELWQNSLMGSLPVHL 361
Query: 362 GRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIV 405
G+NS L+W+DVS+N +G IP +C L KLILF+N+F+G +
Sbjct: 362 GKNSPLKWLDVSSNKLSGDIPSGLCYSRNLTKLILFNNSFSGQI 405
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Involved in the regulation of procambium maintenance and polarity during vascular-tissue development. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGV1|RCH1_ARATH LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 283 bits (723), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 212/722 (29%), Positives = 333/722 (46%), Gaps = 117/722 (16%)
Query: 73 NNTIVVGINLSMKGLSGALPG-----KPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSL 127
N T +V + +SG +P K L IF N G P E+ +L
Sbjct: 369 NCTKLVQFQIDANQISGLIPPEIGLLKELNIFLGW-------QNKLEGNIPDELAGCQNL 421
Query: 128 ISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSG 187
+LD+S+N +G P G+ LRNL L SN+ SG +P EI L L L + +G
Sbjct: 422 QALDLSQNYLTGSLPAGLFQLRNLTKLLLISNAISGVIPLEIGNCTSLVRLRLVNNRITG 481
Query: 188 PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEV 247
IP G ++L FL L+ N L+ +P E+ + + + + N QG +P L +++++
Sbjct: 482 EIPKGIGFLQNLSFLDLSENNLSGPVPLEISNCRQLQMLNLSNNTLQGYLPLSLSSLTKL 541
Query: 248 QYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG 307
Q LD++ +L+G IP L +L L L L +N G++P T L+ LDLS N +SG
Sbjct: 542 QVLDVSSNDLTGKIPDSLGHLISLNRLILSKNSFNGEIPSSLGHCTNLQLLDLSSNNISG 601
Query: 308 PIPESFADLKNLRL-LSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSK 366
IPE D+++L + L+L +N + G +PE + L L +L I +N SG L L
Sbjct: 602 TIPEELFDIQDLDIALNLSWNSLDGFIPERISALNRLSVLDISHNMLSGDLSA-LSGLEN 660
Query: 367 LRWVDVSTNNFNGSIPPD----------------ICSGGVLFKLILFSNNFT-------- 402
L +++S N F+G +P +CS G + S+ T
Sbjct: 661 LVSLNISHNRFSGYLPDSKVFRQLIGAEMEGNNGLCSKGFRSCFVSNSSQLTTQRGVHSH 720
Query: 403 ------GIVMFIAA--ALLGIFFFRRGGKG--------------HWKMISFLGLPQFTAN 440
G+++ + A A+LG+ R + W+ F L FT
Sbjct: 721 RLRIAIGLLISVTAVLAVLGVLAVIRAKQMIRDDNDSETGENLWTWQFTPFQKL-NFTVE 779
Query: 441 DVLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKI------------V 488
VL+ E + S KA +P ++VKK+ W T +
Sbjct: 780 HVLKCL--VEGNVIGKGCSGIVYKAEMPNREVIAVKKL-WPVTVPNLNEKTKSSGVRDSF 836
Query: 489 SEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKR-----DWAAKYK 543
S + +G++RHKN++R LG C+N++ L+YDY+ NG+L + + W +YK
Sbjct: 837 SAEVKTLGSIRHKNIVRFLGCCWNKNTRLLMYDYMSNGSLGSLLHERSGVCSLGWEVRYK 896
Query: 544 IVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKI 603
I+LG A+GL +LHHDC P I H D+KA+NI+ + EP++ +FG L DG F A+
Sbjct: 897 IILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPDFEPYIGDFGLAKLVD--DGDF-ARS 953
Query: 604 AWTESG-------EFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLG 656
+ T +G E+ +MK DVY +G ++LE+LT +PID +
Sbjct: 954 SNTIAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTG-----------KQPIDPTIP 1002
Query: 657 ---------------EMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701
++ ++ S +E+ L VALLC P DRP+M++ +
Sbjct: 1003 DGLHIVDWVKKIRDIQVIDQGLQARPESEVEEMMQTLGVALLCINPIPEDRPTMKDVAAM 1062
Query: 702 LS 703
LS
Sbjct: 1063 LS 1064
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SYQ8|CLV1_ARATH Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 279 bits (714), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 163/377 (43%), Positives = 240/377 (63%), Gaps = 13/377 (3%)
Query: 29 EALLSLKSELVD-DFNSLHDWFVPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLSMKGL 87
E LL+LKS ++ + LHDW ++ + CS+SGV C+ ++ V+ +N+S L
Sbjct: 29 EVLLNLKSSMIGPKGHGLHDW-----IHSSSPDAHCSFSGVSCD-DDARVISLNVSFTPL 82
Query: 88 SGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRN-NFSGHFPGGI- 145
G + P LV+L L+ N+F+G+ P+E+ +LTSL L+IS N N +G FPG I
Sbjct: 83 FGTI--SPEIGMLTHLVNLTLAANNFTGELPLEMKSLTSLKVLNISNNGNLTGTFPGEIL 140
Query: 146 QSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLA 205
+++ +L VLD ++N+F+G +P E+S+L+ LK L+ G++FSG IP +G +SLE+L L
Sbjct: 141 KAMVDLEVLDTYNNNFNGKLPPEMSELKKLKYLSFGGNFFSGEIPESYGDIQSLEYLGLN 200
Query: 206 GNLLNDQIPAELGMLKTVTHMEIGY-NFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE 264
G L+ + PA L LK + M IGY N Y G +P + G +++++ LD+A L+G IP
Sbjct: 201 GAGLSGKSPAFLSRLKNLREMYIGYYNSYTGGVPPEFGGLTKLEILDMASCTLTGEIPTS 260
Query: 265 LSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSL 324
LSNL L +LFL N L G +P E S + +LKSLDLS N+L+G IP+SF +L N+ L++L
Sbjct: 261 LSNLKHLHTLFLHINNLTGHIPPELSGLVSLKSLDLSINQLTGEIPQSFINLGNITLINL 320
Query: 325 MYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPD 384
N + G +PE++ +LP LE+ +W N F+ LP NLGRN L +DVS N+ G IP D
Sbjct: 321 FRNNLYGQIPEAIGELPKLEVFEVWENNFTLQLPANLGRNGNLIKLDVSDNHLTGLIPKD 380
Query: 385 ICSGGVLFKLILFSNNF 401
+C G L LIL SNNF
Sbjct: 381 LCRGEKLEMLIL-SNNF 396
|
Involved in the detection of CLV3 and CLV3-like peptides, that act as extracellular signals regulating meristem maintenance. Acts with CLV3 as a ligand-receptor pair in a signal transduction pathway coordinating growth between adjacent meristematic regions and controlling the balance between meristem cell proliferation and differentiation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGF5|Y1341_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 278 bits (712), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 226/725 (31%), Positives = 345/725 (47%), Gaps = 116/725 (16%)
Query: 73 NNTIVVGINLSMKGLSGALPG-----KPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSL 127
N + ++ + L LSG++P K L+ FF L NS SG P N T L
Sbjct: 354 NCSSLIALQLDKNKLSGSIPSQIGNLKSLQSFF-------LWENSISGTIPSSFGNCTDL 406
Query: 128 ISLDISRNNFSGHFP------------------------GGIQSLRNLLVLDAFSNSFSG 163
++LD+SRN +G P + ++L+ L N SG
Sbjct: 407 VALDLSRNKLTGRIPEELFSLKRLSKLLLLGNSLSGGLPKSVAKCQSLVRLRVGENQLSG 466
Query: 164 SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV 223
+P EI +L++L L+L ++FSG +P + + LE L + N + IPA+LG L +
Sbjct: 467 QIPKEIGELQNLVFLDLYMNHFSGGLPYEISNITVLELLDVHNNYITGDIPAQLGNLVNL 526
Query: 224 THMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAG 283
+++ N + GNIP GN+S + L + L+G IPK + NL KL L L N L+G
Sbjct: 527 EQLDLSRNSFTGNIPLSFGNLSYLNKLILNNNLLTGQIPKSIKNLQKLTLLDLSYNSLSG 586
Query: 284 QVPWEFSRVTTLK-SLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPS 342
++P E +VT+L +LDLS N +G IPE+F+DL L+ L L N + G + + L L S
Sbjct: 587 EIPQELGQVTSLTINLDLSYNTFTGNIPETFSDLTQLQSLDLSSNSLHGDI-KVLGSLTS 645
Query: 343 LEILFIWNNYFSGSLP-----ENLGRNSKLRWVDVS-----------TNNFNGSIPPDIC 386
L L I N FSG +P + + S L+ ++ T NG P I
Sbjct: 646 LASLNISCNNFSGPIPSTPFFKTISTTSYLQNTNLCHSLDGITCSSHTGQNNGVKSPKIV 705
Query: 387 SGGVLFKLILFSNNFTGIVMFIAAALLGIFFFRRGGKGH----------------WKMIS 430
+ L +IL S I + I AA L I K W I
Sbjct: 706 A---LTAVILAS-----ITIAILAAWLLILRNNHLYKTSQNSSSSPSTAEDFSYPWTFIP 757
Query: 431 FLGLPQFTANDVLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKI-------EWGAT 483
F L T N+++ S T+ + S KA +P G V+VKK+ E G +
Sbjct: 758 FQKL-GITVNNIVTSL--TDENVIGKGCSGIVYKAEIPNGDIVAVKKLWKTKDNNEEGES 814
Query: 484 RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKR--DWAAK 541
I + I +G +RH+N+++LLG+C N+ LLY+Y PNGNL + ++ R DW +
Sbjct: 815 TIDSFAAEIQILGNIRHRNIVKLLGYCSNKSVKLLLYNYFPNGNLQQLLQGNRNLDWETR 874
Query: 542 YKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPA 601
YKI +G A+GL +LHHDC PAI H D+K +NI+ D E LA+FG L + A
Sbjct: 875 YKIAIGAAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAILADFGLAKLMMNSPNYHNA 934
Query: 602 --KIAWTE---SGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLG 656
++A + + E+ M DVY +G ++LEIL+ GR S+++ + DGL
Sbjct: 935 MSRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILS-GR-----SAVEPQIGDGLHI 988
Query: 657 EMYNENEVGS---------------SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701
+ + ++G+ + E+ L +A+ C +P +RP+M+E + L
Sbjct: 989 VEWVKKKMGTFEPALSVLDVKLQGLPDQIVQEMLQTLGIAMFCVNPSPVERPTMKEVVTL 1048
Query: 702 LSGLK 706
L +K
Sbjct: 1049 LMEVK 1053
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49545|BAME1_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabidopsis thaliana GN=BAM1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 276 bits (707), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 163/386 (42%), Positives = 236/386 (61%), Gaps = 18/386 (4%)
Query: 22 SANDPYSE--ALLSLKSELV---DDFNS-LHDWFVPPGVNPAGKIYACSWSGVKCNKNNT 75
+A+ P SE ALLSLK+ L DD NS L W V C+W GV C+ +
Sbjct: 18 TASRPISEFRALLSLKTSLTGAGDDKNSPLSSWKV--------STSFCTWIGVTCDVSRR 69
Query: 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRN 135
V ++LS LSG L P L +L+L+ N SG P EI +L+ L L++S N
Sbjct: 70 HVTSLDLSGLNLSGTL--SPDVSHLRLLQNLSLAENLISGPIPPEISSLSGLRHLNLSNN 127
Query: 136 NFSGHFPGGIQS-LRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFG 194
F+G FP I S L NL VLD ++N+ +G +P ++ L L+ L+L G+YF+G IP +G
Sbjct: 128 VFNGSFPDEISSGLVNLRVLDVYNNNLTGDLPVSVTNLTQLRHLHLGGNYFAGKIPPSYG 187
Query: 195 SFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGY-NFYQGNIPWQLGNMSEVQYLDIA 253
S+ +E+L ++GN L +IP E+G L T+ + IGY N ++ +P ++GN+SE+ D A
Sbjct: 188 SWPVIEYLAVSGNELVGKIPPEIGNLTTLRELYIGYYNAFEDGLPPEIGNLSELVRFDGA 247
Query: 254 GANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESF 313
L+G IP E+ L KL++LFL N +G + WE +++LKS+DLS+N +G IP SF
Sbjct: 248 NCGLTGEIPPEIGKLQKLDTLFLQVNVFSGPLTWELGTLSSLKSMDLSNNMFTGEIPASF 307
Query: 314 ADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVS 373
A+LKNL LL+L N++ G +PE + LP LE+L +W N F+GS+P+ LG N KL VD+S
Sbjct: 308 AELKNLTLLNLFRNKLHGEIPEFIGDLPELEVLQLWENNFTGSIPQKLGENGKLNLVDLS 367
Query: 374 TNNFNGSIPPDICSGGVLFKLILFSN 399
+N G++PP++CSG L LI N
Sbjct: 368 SNKLTGTLPPNMCSGNKLETLITLGN 393
|
Necessary for male gametophyte development, as well as ovule specification and function. Involved in cell-cell communication process required during early anther development, and regulating cell division and differentiation to organize cell layers. Required for the development of high-ordered vascular strands within the leaf and a correlated control of leaf shape, size and symmetry. May regulate the CLV1-dependent CLV3-mediated signaling in meristems maintenance. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LHP4|RCH2_ARATH Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 273 bits (698), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 221/722 (30%), Positives = 342/722 (47%), Gaps = 110/722 (15%)
Query: 73 NNTIVVGINLSMKGLSGALPGK-----PLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSL 127
N + +V + L +SG +P + L +FF N G P + + T L
Sbjct: 368 NCSSLVQLQLDKNQISGLIPSELGTLTKLTLFF-------AWSNQLEGSIPPGLADCTDL 420
Query: 128 ISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSG 187
+LD+SRN+ +G P G+ LRNL L SNS SG +P EI L L L + +G
Sbjct: 421 QALDLSRNSLTGTIPSGLFMLRNLTKLLLISNSLSGFIPQEIGNCSSLVRLRLGFNRITG 480
Query: 188 PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEV 247
IPS GS K + FL + N L+ ++P E+G + +++ N +G++P + ++S +
Sbjct: 481 EIPSGIGSLKKINFLDFSSNRLHGKVPDEIGSCSELQMIDLSNNSLEGSLPNPVSSLSGL 540
Query: 248 QYLDIAGANLSGSIPKELSNLTKLESLFLFRN------------------------QLAG 283
Q LD++ SG IP L L L L L +N +L+G
Sbjct: 541 QVLDVSANQFSGKIPASLGRLVSLNKLILSKNLFSGSIPTSLGMCSGLQLLDLGSNELSG 600
Query: 284 QVPWEFSRVTTLK-SLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPS 342
++P E + L+ +L+LS NRL+G IP A L L +L L +N + G + L + +
Sbjct: 601 EIPSELGDIENLEIALNLSSNRLTGKIPSKIASLNKLSILDLSHNMLEGDLA-PLANIEN 659
Query: 343 LEILFIWNNYFSGSLPEN-LGRNSKLRWVDVSTNNFNGSIPPDIC--------------- 386
L L I N FSG LP+N L R +L D+ N S D C
Sbjct: 660 LVSLNISYNSFSGYLPDNKLFR--QLSPQDLEGNKKLCSSTQDSCFLTYRKGNGLGDDGD 717
Query: 387 -SGGVLFKLILFSNNFTGIVMFIAAALLGIFFFRR----------GGKGHWKMISFLGLP 435
S +L L +V+ I A + + RR G W+ F L
Sbjct: 718 ASRTRKLRLTLALLITLTVVLMILGA-VAVIRARRNIDNERDSELGETYKWQFTPFQKL- 775
Query: 436 QFTANDVLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT-------RIKIV 488
F+ + ++R E + S +A + G ++VKK+ W A + K V
Sbjct: 776 NFSVDQIIRCL--VEPNVIGKGCSGVVYRADVDNGEVIAVKKL-WPAMVNGGHDEKTKNV 832
Query: 489 ----SEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKR----DWAA 540
S + +GT+RHKN++R LG C+NR+ L+YDY+PNG+L + +R DW
Sbjct: 833 RDSFSAEVKTLGTIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRGSSLDWDL 892
Query: 541 KYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFP 600
+Y+I+LG A+GL +LHHDC P I H D+KA+NI+ + EP++A+FG L +L D
Sbjct: 893 RYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFG---LAKLVDEGDI 949
Query: 601 AKIAWTESG-------EFYNAMKEEMYMDVYGFGEIILEILTNGRLTN----AGSSL--- 646
+ + T +G E+ +MK DVY +G ++LE+LT + + G L
Sbjct: 950 GRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTVPEGIHLVDW 1009
Query: 647 --QNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 704
QN+ G L E+ + + + DE+ VL ALLC S+P +RP+M++ +L
Sbjct: 1010 VRQNR---GSL-EVLDSTLRSRTEAEADEMMQVLGTALLCVNSSPDERPTMKDVAAMLKE 1065
Query: 705 LK 706
+K
Sbjct: 1066 IK 1067
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O82318|Y2579_ARATH Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 OS=Arabidopsis thaliana GN=At2g25790 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 270 bits (689), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 164/398 (41%), Positives = 233/398 (58%), Gaps = 16/398 (4%)
Query: 7 LYLNLFIWLVFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACSWS 66
L LF + + AN+ E LLS KS + D L W + + C WS
Sbjct: 13 LITTLFFLFLNFSCLHANEL--ELLLSFKSSIQDPLKHLSSW------SYSSTNDVCLWS 64
Query: 67 GVKCNKNNTIVVGINLSMKGLSGA-LPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLT 125
GV CN N + VV ++LS K +SG L R+ F L +NLS+N+ SG P +IF +
Sbjct: 65 GVVCN-NISRVVSLDLSGKNMSGQILTAATFRLPF--LQTINLSNNNLSGPIPHDIFTTS 121
Query: 126 S--LISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 183
S L L++S NNFSG P G L NL LD +N F+G + +I +L+VL+L G+
Sbjct: 122 SPSLRYLNLSNNNFSGSIPRGF--LPNLYTLDLSNNMFTGEIYNDIGVFSNLRVLDLGGN 179
Query: 184 YFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGN 243
+G +P G+ LEFL LA N L +P ELG +K + + +GYN G IP+Q+G
Sbjct: 180 VLTGHVPGYLGNLSRLEFLTLASNQLTGGVPVELGKMKNLKWIYLGYNNLSGEIPYQIGG 239
Query: 244 MSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDN 303
+S + +LD+ NLSG IP L +L KLE +FL++N+L+GQ+P + L SLD SDN
Sbjct: 240 LSSLNHLDLVYNNLSGPIPPSLGDLKKLEYMFLYQNKLSGQIPPSIFSLQNLISLDFSDN 299
Query: 304 RLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGR 363
LSG IPE A +++L +L L N ++G +PE + LP L++L +W+N FSG +P NLG+
Sbjct: 300 SLSGEIPELVAQMQSLEILHLFSNNLTGKIPEGVTSLPRLKVLQLWSNRFSGGIPANLGK 359
Query: 364 NSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNF 401
++ L +D+STNN G +P +C G L KLILFSN+
Sbjct: 360 HNNLTVLDLSTNNLTGKLPDTLCDSGHLTKLILFSNSL 397
|
Arabidopsis thaliana (taxid: 3702) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 710 | ||||||
| 296084588 | 827 | unnamed protein product [Vitis vinifera] | 0.992 | 0.852 | 0.548 | 0.0 | |
| 255565085 | 958 | Receptor protein kinase CLAVATA1 precurs | 0.625 | 0.463 | 0.703 | 1e-176 | |
| 359484751 | 972 | PREDICTED: leucine-rich repeat receptor- | 0.566 | 0.413 | 0.729 | 1e-168 | |
| 224088234 | 955 | predicted protein [Populus trichocarpa] | 0.564 | 0.419 | 0.727 | 1e-167 | |
| 224144009 | 953 | predicted protein [Populus trichocarpa] | 0.564 | 0.420 | 0.752 | 1e-166 | |
| 449443009 | 959 | PREDICTED: leucine-rich repeat receptor- | 0.559 | 0.413 | 0.698 | 1e-157 | |
| 356556623 | 960 | PREDICTED: leucine-rich repeat receptor- | 0.566 | 0.418 | 0.716 | 1e-157 | |
| 356533009 | 960 | PREDICTED: leucine-rich repeat receptor- | 0.566 | 0.418 | 0.689 | 1e-151 | |
| 297795941 | 894 | predicted protein [Arabidopsis lyrata su | 0.550 | 0.437 | 0.673 | 1e-147 | |
| 15242059 | 895 | putative leucine-rich repeat transmembra | 0.563 | 0.446 | 0.651 | 1e-146 |
| >gi|296084588|emb|CBI25609.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/812 (54%), Positives = 543/812 (66%), Gaps = 107/812 (13%)
Query: 1 MEIFHCLYLNLFIWLVFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKI 60
MEIF +++ L+ + AV A D +S+ALLSLKSE VDD NSL DWFVPPGV K+
Sbjct: 1 MEIFRSFCVSVLGALLVIEAVLAADLFSDALLSLKSEFVDDSNSLADWFVPPGVEEYDKV 60
Query: 61 YACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVE 120
YACSW V CNKN+++V+G++LS K L G + GK +F ELVDLNLS+NSFS Q PVE
Sbjct: 61 YACSWFEVTCNKNSSLVIGLDLSSKNLGGIISGKQFSVF-TELVDLNLSYNSFSEQLPVE 119
Query: 121 IFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180
IFNLT+L SLDISRNNFSGHFPGG+ L +L+VLDAFSNSFSG +P E+SQLE+LKVLNL
Sbjct: 120 IFNLTNLRSLDISRNNFSGHFPGGVSRLEHLVVLDAFSNSFSGPLPTEVSQLEYLKVLNL 179
Query: 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQ 240
AGSYF GPIPS++GSFKSLEF+HLAGNLL+ IP ELG L TVTHMEIGYN YQG+IPWQ
Sbjct: 180 AGSYFKGPIPSEYGSFKSLEFIHLAGNLLSGSIPPELGKLSTVTHMEIGYNSYQGSIPWQ 239
Query: 241 LGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDL 300
LGNM+E+QYLDIAGA+LSGSIPK+LSNLTKL+SLFLFRNQL G +P EFSR+ TL LDL
Sbjct: 240 LGNMTEIQYLDIAGADLSGSIPKQLSNLTKLQSLFLFRNQLTGLIPSEFSRIVTLTDLDL 299
Query: 301 SDNRL------------------------SGPIPESFADLKNLRLLSLMYNEMSGTVPES 336
SDN+L SG +PES A+L L L + N SG++P+S
Sbjct: 300 SDNQLSGSIPESFSELKNLRLLSLMYNDMSGTVPESIAELPLLDTLLIWNNFFSGSLPQS 359
Query: 337 L------------------------------------------------VQLPSLEILFI 348
L SL L +
Sbjct: 360 LGTNSKLKWVDVSTNNFNGPIPPEICTGGVLFKLILFSNNFTGGLSPSLSNCSSLVRLRL 419
Query: 349 WNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIVMFI 408
NN FSG +P ++ +VD+S N F G IP DI L + N+ G ++
Sbjct: 420 ENNSFSGEIPLRFSHLPEITYVDLSGNGFTGGIPTDISQASNLQYFNVSKNSELGGMLPA 479
Query: 409 AAALLGIF--FFRRGGK--GH---WKMISFLGLPQFTANDVLRSFNSTECEE-------- 453
L + F K GH +++ + + + + N++ T C++
Sbjct: 480 KIWSLPLLQNFSASSCKISGHIPAFQVCKNITVIEVSMNNLSGIIPETACKKDFQSDGKD 539
Query: 454 -------------------AARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITR 494
P S++ CKAVLPTGITVSVKKIEW A R+K++SEFITR
Sbjct: 540 KLKWVLLLCAGVLLFILVSTTPPLSSSVCKAVLPTGITVSVKKIEWEAKRMKVMSEFITR 599
Query: 495 IGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCF 554
IG RHKNLIRLLGFCYN+H AYLLYDYLPNGNL+EKIR KRDW AKYKIV+G+ARGL +
Sbjct: 600 IGNARHKNLIRLLGFCYNKHVAYLLYDYLPNGNLAEKIRMKRDWTAKYKIVIGIARGLHY 659
Query: 555 LHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNA 614
LHH+CYPAIPHGDLK+S+I+FDENMEPHLAEFGFK L +L S P+ I+ TE+GEF A
Sbjct: 660 LHHECYPAIPHGDLKSSDILFDENMEPHLAEFGFKLLAELNKASLPSTISRTETGEFNPA 719
Query: 615 MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674
+KEE+Y D+Y FGE+I+E +TNGRLTNAG S+Q+KP + LL E+YNENEVGS+ S+Q+EI
Sbjct: 720 IKEELYTDIYSFGEVIMETITNGRLTNAGGSIQSKPREALLREIYNENEVGSADSMQEEI 779
Query: 675 KLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706
KLV +VALLCTRS PSDRPSME+ L LLSGLK
Sbjct: 780 KLVFEVALLCTRSRPSDRPSMEDVLNLLSGLK 811
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255565085|ref|XP_002523535.1| Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis] gi|223537242|gb|EEF38874.1| Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 624 bits (1608), Expect = e-176, Method: Compositional matrix adjust.
Identities = 315/448 (70%), Positives = 366/448 (81%), Gaps = 4/448 (0%)
Query: 1 MEIFHCLYLNLFIWLVFVPAV-SANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGK 59
MEIF LYLN+F+ L+F AV SA DPYSEALLSLKSEL+DD NSL DW +P NP+ K
Sbjct: 1 MEIFRFLYLNIFLILIFTAAVVSATDPYSEALLSLKSELMDDDNSLADWLLPSVGNPSKK 60
Query: 60 IYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPV 119
I+ACSWSGVKCNKN+T+V+ +++S K L GA PGK +F ELVDLNLS+NSFSG+ PV
Sbjct: 61 IHACSWSGVKCNKNSTVVIALDISFKNLGGAFPGKHFSVF-TELVDLNLSYNSFSGRLPV 119
Query: 120 EIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179
EIFNLT+L SLD SRNNFSG FP GI SL+NL+VLDAFSNSFSG +P EISQLE++K++N
Sbjct: 120 EIFNLTNLRSLDFSRNNFSGQFPSGISSLQNLVVLDAFSNSFSGLLPVEISQLEYIKIVN 179
Query: 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPW 239
LAGSYF GPIP ++GSF+SLEF+HLAGNLL+ IP ELG LKTVTHMEIGYN YQG+IPW
Sbjct: 180 LAGSYFDGPIPPEYGSFRSLEFIHLAGNLLSGNIPPELGRLKTVTHMEIGYNSYQGSIPW 239
Query: 240 QLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLD 299
QLGNMSE+QYLDIAGA+L+GSIPKELSNLTKL SLFLFRN L G VPWEF R+ L SLD
Sbjct: 240 QLGNMSEIQYLDIAGASLTGSIPKELSNLTKLRSLFLFRNHLTGLVPWEFGRIEPLSSLD 299
Query: 300 LSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPE 359
LSDN+LSGPIPESF++LKNL+LLSLMYNEM+GTVP+ + QLPSL+ L IWNN+FSGSLPE
Sbjct: 300 LSDNQLSGPIPESFSELKNLKLLSLMYNEMNGTVPQGIAQLPSLDTLLIWNNFFSGSLPE 359
Query: 360 NLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIVMFIAAALLGIFFFR 419
+LGRNSKL+WVDVSTNNF GSIPPDIC+GGVLFKLILFSNNFTG + + + R
Sbjct: 360 DLGRNSKLKWVDVSTNNFVGSIPPDICAGGVLFKLILFSNNFTGSLSPSISKCSSLVRLR 419
Query: 420 RGGKGHWKMI--SFLGLPQFTANDVLRS 445
W I F LP T D+ R+
Sbjct: 420 IEDNSFWGEIPLKFNNLPDITYVDLSRN 447
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359484751|ref|XP_002264530.2| PREDICTED: leucine-rich repeat receptor-like protein kinase TDR-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 294/403 (72%), Positives = 343/403 (85%), Gaps = 1/403 (0%)
Query: 1 MEIFHCLYLNLFIWLVFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKI 60
MEIF +++ L+ + AV A D +S+ALLSLKSE VDD NSL DWFVPPGV K+
Sbjct: 1 MEIFRSFCVSVLGALLVIEAVLAADLFSDALLSLKSEFVDDSNSLADWFVPPGVEEYDKV 60
Query: 61 YACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVE 120
YACSW V CNKN+++V+G++LS K L G + GK +F ELVDLNLS+NSFS Q PVE
Sbjct: 61 YACSWFEVTCNKNSSLVIGLDLSSKNLGGIISGKQFSVF-TELVDLNLSYNSFSEQLPVE 119
Query: 121 IFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180
IFNLT+L SLDISRNNFSGHFPGG+ L +L+VLDAFSNSFSG +P E+SQLE+LKVLNL
Sbjct: 120 IFNLTNLRSLDISRNNFSGHFPGGVSRLEHLVVLDAFSNSFSGPLPTEVSQLEYLKVLNL 179
Query: 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQ 240
AGSYF GPIPS++GSFKSLEF+HLAGNLL+ IP ELG L TVTHMEIGYN YQG+IPWQ
Sbjct: 180 AGSYFKGPIPSEYGSFKSLEFIHLAGNLLSGSIPPELGKLSTVTHMEIGYNSYQGSIPWQ 239
Query: 241 LGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDL 300
LGNM+E+QYLDIAGA+LSGSIPK+LSNLTKL+SLFLFRNQL G +P EFSR+ TL LDL
Sbjct: 240 LGNMTEIQYLDIAGADLSGSIPKQLSNLTKLQSLFLFRNQLTGLIPSEFSRIVTLTDLDL 299
Query: 301 SDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPEN 360
SDN+LSG IPESF++LKNLRLLSLMYN+MSGTVPES+ +LP L+ L IWNN+FSGSLP++
Sbjct: 300 SDNQLSGSIPESFSELKNLRLLSLMYNDMSGTVPESIAELPLLDTLLIWNNFFSGSLPQS 359
Query: 361 LGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTG 403
LG NSKL+WVDVSTNNFNG IPP+IC+GGVLFKLILFSNNFTG
Sbjct: 360 LGTNSKLKWVDVSTNNFNGPIPPEICTGGVLFKLILFSNNFTG 402
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224088234|ref|XP_002308383.1| predicted protein [Populus trichocarpa] gi|222854359|gb|EEE91906.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 294/404 (72%), Positives = 335/404 (82%), Gaps = 3/404 (0%)
Query: 1 MEIFHCLYLNLFIWLVFVPAVS-ANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGK 59
MEIFHCLY + + F+ AV A +PYSEALLSLKSEL+DD NSL DW VPPG +
Sbjct: 1 MEIFHCLYFRILLTFTFIVAVVVATNPYSEALLSLKSELIDDSNSLDDWSVPPGGQTGER 60
Query: 60 IYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPV 119
+ ACSWSGV+CN N+T+V+ ++LSMK L G L GK +F ELVDLN S+NSFSGQ PV
Sbjct: 61 VQACSWSGVRCNNNSTVVIALDLSMKNLGGELSGKQFSVF-TELVDLNFSYNSFSGQLPV 119
Query: 120 EIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179
IFNLT+L LDISRNNFSG FP GI LRNL+VLDAFSNSFSG +P E+SQL++LK+LN
Sbjct: 120 GIFNLTNLKILDISRNNFSGQFPEGISGLRNLVVLDAFSNSFSGPLPVEVSQLDYLKILN 179
Query: 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPW 239
LAGSYF GPIPS++GSFKSLEF+HLAGN L IP ELG LKTVTHMEIGYN Y+G++PW
Sbjct: 180 LAGSYFDGPIPSKYGSFKSLEFIHLAGNFLGGTIPPELGQLKTVTHMEIGYNSYEGSVPW 239
Query: 240 QLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLD 299
QL NMSE+QYLDIA ANLSG IPK+LSNLTKLESLFLFRNQL G VPWEF ++ L SLD
Sbjct: 240 QLSNMSELQYLDIASANLSGPIPKQLSNLTKLESLFLFRNQLTGSVPWEFGKIVPLASLD 299
Query: 300 LSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPE 359
LSDN LSGPIPESFA+LKNL+LLSLMYNEM+GTVP+ + QLPSLE IWNN+FSGSLP
Sbjct: 300 LSDNHLSGPIPESFAELKNLKLLSLMYNEMNGTVPQGIGQLPSLETFLIWNNFFSGSLPR 359
Query: 360 NLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTG 403
+LGRN KL+WVDVSTNNF GSIPPDIC+GG L KLILFSNNFTG
Sbjct: 360 DLGRNLKLKWVDVSTNNFIGSIPPDICAGG-LVKLILFSNNFTG 402
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224144009|ref|XP_002325155.1| predicted protein [Populus trichocarpa] gi|222866589|gb|EEF03720.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 304/404 (75%), Positives = 344/404 (85%), Gaps = 3/404 (0%)
Query: 1 MEIFHCLYLNLFIWLVFVPAVS-ANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGK 59
MEIFHC+Y + + L + AV A+DPYSEALLSLKSEL+DD +SL DW VPPG N K
Sbjct: 1 MEIFHCMYFGVLLALTCIVAVVLADDPYSEALLSLKSELIDDDSSLDDWLVPPGGNTEEK 60
Query: 60 IYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPV 119
I ACSWSGVKC+KN+T+VV ++LSMK L G L GK +F ELVDLNLS+NSFSGQ PV
Sbjct: 61 IQACSWSGVKCDKNSTVVVALDLSMKNLGGELTGKQFGVF-AELVDLNLSYNSFSGQLPV 119
Query: 120 EIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179
IFNLT+L S DISRNNFSG FPGGI SLRNL+VLDAFSNSFSG +P E+SQLE+LKV N
Sbjct: 120 GIFNLTNLKSFDISRNNFSGQFPGGISSLRNLVVLDAFSNSFSGPLPVEVSQLEYLKVFN 179
Query: 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPW 239
LAGSYF GPIPS++GSFKSLEF+HLAGN L+ IP ELG LKTVTHMEIGYN Y+G+IPW
Sbjct: 180 LAGSYFDGPIPSEYGSFKSLEFIHLAGNSLSGNIPPELGQLKTVTHMEIGYNSYEGSIPW 239
Query: 240 QLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLD 299
Q+GNMSE+QYLDIAGANLSG IPK+LSNLTKLESLFLFRNQL G VPWEF ++ L SLD
Sbjct: 240 QMGNMSELQYLDIAGANLSGPIPKQLSNLTKLESLFLFRNQLTGLVPWEFRQIVPLASLD 299
Query: 300 LSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPE 359
LSDN+LSGPIPESFA+LKNL+LLSLMYNEM+GTVP + QLPSLE L IWNN+FSGSLP
Sbjct: 300 LSDNQLSGPIPESFAELKNLKLLSLMYNEMNGTVPPGIGQLPSLETLLIWNNFFSGSLPN 359
Query: 360 NLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTG 403
+LG+N KL+WVDVSTNNF GSIPPDIC+GG L KLILFSNNFTG
Sbjct: 360 DLGKNLKLKWVDVSTNNFIGSIPPDICAGG-LVKLILFSNNFTG 402
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449443009|ref|XP_004139273.1| PREDICTED: leucine-rich repeat receptor-like protein kinase TDR-like [Cucumis sativus] gi|449493663|ref|XP_004159400.1| PREDICTED: leucine-rich repeat receptor-like protein kinase TDR-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 278/398 (69%), Positives = 329/398 (82%), Gaps = 1/398 (0%)
Query: 6 CLYLNLFIWLVFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACSW 65
CL L ++L+F A ++ D YSEALLSLKSE +DDF SL DW V NP GKI+ CSW
Sbjct: 6 CLCFYLLVFLLFCVAAASTDRYSEALLSLKSEFLDDFGSLSDWIVDSRENPFGKIHGCSW 65
Query: 66 SGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLT 125
SG+KC+KN+TIV+GI+LSMK L G + G+ +F ELVDLNLSHN SG+ PV IFNLT
Sbjct: 66 SGIKCDKNSTIVIGIDLSMKRLGGGISGEQFHVF-KELVDLNLSHNYISGKLPVGIFNLT 124
Query: 126 SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYF 185
+L SLDISRNNFSGHFP GI SL+NL+VLDAFSNSF+GS+P ++SQLE+LK LN AGSYF
Sbjct: 125 NLRSLDISRNNFSGHFPLGISSLQNLVVLDAFSNSFAGSLPVDLSQLENLKFLNFAGSYF 184
Query: 186 SGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMS 245
GPIPS++GSFK LEF+HLAGN L+ +P ELG LKTVTHMEIGYN +QGN+PW+ GNMS
Sbjct: 185 KGPIPSEYGSFKKLEFIHLAGNFLSGNLPPELGKLKTVTHMEIGYNNFQGNLPWEFGNMS 244
Query: 246 EVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRL 305
+QYLDIA ANLSGSIPKE NLTKLESLFLFRNQL+G +P E S++ +L +LDLSDN +
Sbjct: 245 NLQYLDIASANLSGSIPKEFGNLTKLESLFLFRNQLSGFLPDELSKIISLVNLDLSDNHI 304
Query: 306 SGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNS 365
SGPIPESF++LKNLRLLS+MYNEMSG+VP+ + +LPSLE L IW+N FSGSLP NLG N
Sbjct: 305 SGPIPESFSELKNLRLLSVMYNEMSGSVPKGIGELPSLETLLIWSNQFSGSLPNNLGSNK 364
Query: 366 KLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTG 403
KL+WVDVSTNNF G IPPDIC GG+LFKLILFSN F+G
Sbjct: 365 KLKWVDVSTNNFVGVIPPDICQGGLLFKLILFSNKFSG 402
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356556623|ref|XP_003546623.1| PREDICTED: leucine-rich repeat receptor-like protein kinase TDR-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 291/406 (71%), Positives = 324/406 (79%), Gaps = 4/406 (0%)
Query: 1 MEIFHCLYLNLFIWLVFV---PAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPA 57
MEIF C Y+ I + F AV A DPYSEALLSLKSELVDD NSLH+W VP G
Sbjct: 1 MEIFKCFYIKNLILVTFFMVSSAVLAIDPYSEALLSLKSELVDDDNSLHNWVVPSGGKLT 60
Query: 58 GKIYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQF 117
GK YACSWSG+KCN ++TIV I+LSMK L G + GK IF N L LNLSHN FSGQ
Sbjct: 61 GKSYACSWSGIKCNNDSTIVTSIDLSMKKLGGVVSGKQFIIFTN-LTSLNLSHNFFSGQL 119
Query: 118 PVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKV 177
P EIFNLTSL SLDISRNNFSG FPGGI L+NL+VLDAFSNSFSG +PAE SQLE+LKV
Sbjct: 120 PAEIFNLTSLTSLDISRNNFSGPFPGGIPRLQNLVVLDAFSNSFSGPLPAEFSQLENLKV 179
Query: 178 LNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNI 237
LNLAGSYF G IP ++GSFKSLEFLHLAGN L IP ELG LKTVTHMEIGYN YQG I
Sbjct: 180 LNLAGSYFRGSIPPEYGSFKSLEFLHLAGNSLTGSIPPELGHLKTVTHMEIGYNEYQGFI 239
Query: 238 PWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKS 297
P +LGNMS++QYLDIAGANLSG IPK+LSNLT L+S+FLFRNQL G +P E S + L
Sbjct: 240 PPELGNMSQLQYLDIAGANLSGPIPKQLSNLTSLQSIFLFRNQLTGSIPSELSIIEPLTD 299
Query: 298 LDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSL 357
LDLSDN L G IPESF++L+NLRLLS+MYN+MSGTVPES+ +LPSLE L IWNN FSGSL
Sbjct: 300 LDLSDNFLIGSIPESFSELENLRLLSVMYNDMSGTVPESIAKLPSLETLLIWNNRFSGSL 359
Query: 358 PENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTG 403
P +LGRNSKL+WVD STN+ GSIPPDIC+ G LFKLILFSN FTG
Sbjct: 360 PPSLGRNSKLKWVDASTNDLVGSIPPDICASGELFKLILFSNKFTG 405
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356533009|ref|XP_003535061.1| PREDICTED: leucine-rich repeat receptor-like protein kinase TDR-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 280/406 (68%), Positives = 318/406 (78%), Gaps = 4/406 (0%)
Query: 1 MEIF---HCLYLNLFIWLVFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPA 57
ME+F H L L ++V ++ +DPYSEALLSLK+ELVDD NSL +W VP G
Sbjct: 1 MEVFKYSHIKNLLLATFMVSSAVLAIDDPYSEALLSLKAELVDDDNSLQNWVVPSGGKLT 60
Query: 58 GKIYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQF 117
GK YACSWSG+KCN +TIV I+LSMK L G + GK IF N L LNLSHN FSG
Sbjct: 61 GKSYACSWSGIKCNNGSTIVTSIDLSMKKLGGVVSGKQFSIFTN-LTSLNLSHNFFSGNL 119
Query: 118 PVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKV 177
P +IFNLTSL SLDISRNNFSG FPGGI L+NL+VLDAFSNSFSGS+PAE SQL LKV
Sbjct: 120 PAKIFNLTSLTSLDISRNNFSGPFPGGIPRLQNLIVLDAFSNSFSGSLPAEFSQLASLKV 179
Query: 178 LNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNI 237
LNLAGSYF G IPS++GSFKSLEFLHLAGN L+ IP ELG L TVTHMEIGYN YQG I
Sbjct: 180 LNLAGSYFRGSIPSEYGSFKSLEFLHLAGNSLSGSIPPELGHLNTVTHMEIGYNLYQGFI 239
Query: 238 PWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKS 297
P ++GNMS++QYLDIAGANLSG IPK+LSNL+ L+SLFLF NQL G +P E S + L
Sbjct: 240 PPEIGNMSQLQYLDIAGANLSGLIPKQLSNLSNLQSLFLFSNQLTGSIPSELSNIEPLTD 299
Query: 298 LDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSL 357
LDLSDN +G IPESF+DL+NLRLLS+MYN+MSGTVPE + QLPSLE L IWNN FSGSL
Sbjct: 300 LDLSDNFFTGSIPESFSDLENLRLLSVMYNDMSGTVPEGIAQLPSLETLLIWNNKFSGSL 359
Query: 358 PENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTG 403
P +LGRNSKL+WVD STN+ G+IPPDIC G LFKLILFSN FTG
Sbjct: 360 PRSLGRNSKLKWVDASTNDLVGNIPPDICVSGELFKLILFSNKFTG 405
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297795941|ref|XP_002865855.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297311690|gb|EFH42114.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 274/407 (67%), Positives = 332/407 (81%), Gaps = 16/407 (3%)
Query: 6 CLYLNLFIWLVFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFV-PPGVNPAGKIYAC- 63
C YL LF+ LV A DP +E+LL+LKS+L D+ NSL DWF+ PGV + K+ AC
Sbjct: 12 CFYLCLFLTLV------AADPQTESLLTLKSQLTDNSNSLKDWFIITPGV--SDKVVACC 63
Query: 64 SWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIF- 122
SWSGV+CN+N+T VV ++LS K L+G+L GK + + F EL++LN+S NSFSG+FP EIF
Sbjct: 64 SWSGVRCNQNSTSVVSLDLSSKNLAGSLSGK-VFLVFTELLELNISDNSFSGEFPTEIFF 122
Query: 123 NLTSLISLDISRNNFSGHFP----GGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 178
NLT+L SLDISRNNFSG FP GG SL+NL++LDA SNSFSG +P +SQLE+LKVL
Sbjct: 123 NLTNLRSLDISRNNFSGRFPDGNGGGGSSLKNLILLDALSNSFSGPLPIHLSQLENLKVL 182
Query: 179 NLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIP 238
NLAGSYF+G IPSQ+GSFK+LEFLHL GNLL+ IP ELG L T+THMEIGYN Y+G IP
Sbjct: 183 NLAGSYFTGSIPSQYGSFKNLEFLHLGGNLLSGHIPQELGNLTTLTHMEIGYNSYEGVIP 242
Query: 239 WQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSL 298
WQ+G MSE++YLDIAGANLSG +PK SNLTKLESLFLFRN L+ ++PWE ++T+L +L
Sbjct: 243 WQIGYMSELKYLDIAGANLSGFLPKHFSNLTKLESLFLFRNHLSREIPWELGQITSLVNL 302
Query: 299 DLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLP 358
DLSDN +SG IPESF+ LKNLRLL+LMYNEMSGT+P+ + QLPSL+ LFIWNNYFSGSLP
Sbjct: 303 DLSDNHISGTIPESFSGLKNLRLLNLMYNEMSGTLPQVIAQLPSLDTLFIWNNYFSGSLP 362
Query: 359 ENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIV 405
++LG NSKLRWVDVSTN+F G IP ICSGGVLFK+ILFSNNFTG +
Sbjct: 363 KSLGMNSKLRWVDVSTNSFEGEIPQGICSGGVLFKVILFSNNFTGTL 409
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15242059|ref|NP_199948.1| putative leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana] gi|9759281|dbj|BAB09746.1| receptor protein kinase-like [Arabidopsis thaliana] gi|224589717|gb|ACN59390.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] gi|332008686|gb|AED96069.1| putative leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 264/405 (65%), Positives = 323/405 (79%), Gaps = 5/405 (1%)
Query: 5 HCLYLNLFIWLVFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACS 64
H + F +F+ V+A +P +E+LL+LKS+L D+FNSL DWF+ + CS
Sbjct: 6 HNKLCSFFYLCLFLTLVAAAEPQTESLLTLKSQLTDNFNSLKDWFINTPEVSDNLVACCS 65
Query: 65 WSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIF-N 123
WSGV+CN+N+T VV ++LS K L+G+L GK + F EL++LN+S NSFSG+FP EIF N
Sbjct: 66 WSGVRCNQNSTSVVSVDLSSKNLAGSLSGKEF-LVFTELLELNISDNSFSGEFPAEIFFN 124
Query: 124 LTSLISLDISRNNFSGHFP---GGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180
+T+L SLDISRNNFSG FP GG SL+NL+ LDA SNSFSG +P +SQLE+LKVLNL
Sbjct: 125 MTNLRSLDISRNNFSGRFPDGNGGDSSLKNLIFLDALSNSFSGPLPIHLSQLENLKVLNL 184
Query: 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQ 240
AGSYF+G IPSQ+GSFK+LEFLHL GNLL+ IP ELG L T+THMEIGYN Y+G IPW+
Sbjct: 185 AGSYFTGSIPSQYGSFKNLEFLHLGGNLLSGHIPQELGNLTTLTHMEIGYNSYEGVIPWE 244
Query: 241 LGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDL 300
+G MSE++YLDIAGANLSG +PK SNLTKLESLFLFRN L+ ++PWE +T+L +LDL
Sbjct: 245 IGYMSELKYLDIAGANLSGFLPKHFSNLTKLESLFLFRNHLSREIPWELGEITSLVNLDL 304
Query: 301 SDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPEN 360
SDN +SG IPESF+ LKNLRLL+LM+NEMSGT+PE + QLPSL+ LFIWNNYFSGSLP++
Sbjct: 305 SDNHISGTIPESFSGLKNLRLLNLMFNEMSGTLPEVIAQLPSLDTLFIWNNYFSGSLPKS 364
Query: 361 LGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIV 405
LG NSKLRWVDVSTN+F G IP ICS GVLFKLILFSNNFTG +
Sbjct: 365 LGMNSKLRWVDVSTNSFQGEIPQGICSRGVLFKLILFSNNFTGTL 409
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 710 | ||||||
| TAIR|locus:2161158 | 1041 | PXY "PHLOEM INTERCALATED WITH | 0.559 | 0.381 | 0.471 | 1.2e-140 | |
| TAIR|locus:2163665 | 895 | MOL1 "MORE LATERAL GROWTH1" [A | 0.559 | 0.443 | 0.658 | 3.9e-140 | |
| TAIR|locus:2139885 | 1013 | AT4G28650 [Arabidopsis thalian | 0.535 | 0.375 | 0.412 | 4.7e-116 | |
| TAIR|locus:2025545 | 1029 | AT1G08590 [Arabidopsis thalian | 0.560 | 0.386 | 0.399 | 1.3e-113 | |
| TAIR|locus:2169965 | 1003 | BAM1 "BARELY ANY MERISTEM 1" [ | 0.608 | 0.430 | 0.390 | 1.3e-113 | |
| UNIPROTKB|Q5Z9N5 | 994 | P0481E08.42 "Os06g0717200 prot | 0.542 | 0.387 | 0.374 | 2.9e-97 | |
| TAIR|locus:2032553 | 996 | HSL1 "HAESA-like 1" [Arabidops | 0.545 | 0.388 | 0.347 | 6.4e-85 | |
| TAIR|locus:2169975 | 993 | HSL2 "HAESA-like 2" [Arabidops | 0.543 | 0.388 | 0.340 | 1.8e-84 | |
| TAIR|locus:2005540 | 999 | HAE "HAESA" [Arabidopsis thali | 0.547 | 0.389 | 0.355 | 5.7e-83 | |
| TAIR|locus:2138268 | 1045 | AT4G08850 [Arabidopsis thalian | 0.532 | 0.361 | 0.340 | 3.5e-81 |
| TAIR|locus:2161158 PXY "PHLOEM INTERCALATED WITH XYLEM" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 946 (338.1 bits), Expect = 1.2e-140, Sum P(2) = 1.2e-140
Identities = 189/401 (47%), Positives = 259/401 (64%)
Query: 3 IFHCLYLNLFIWLVFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYA 62
+ H L L L + F P +LLSLK+ L ++ DW VP VN
Sbjct: 11 VLHPLLLLLLPFFAFNSLALKFSPQLLSLLSLKTSLSGPPSAFQDWKVP--VNGQNDAVW 68
Query: 63 CSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIF 122
CSWSGV C+ V+ ++LS + LSG +P + +R + + L+ LNLS NS G FP IF
Sbjct: 69 CSWSGVVCDNVTAQVISLDLSHRNLSGRIPIQ-IR-YLSSLLYLNLSGNSLEGSFPTSIF 126
Query: 123 NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182
+LT L +LDISRN+F FP GI L+ L V +AFSN+F G +P+++S+L L+ LN G
Sbjct: 127 DLTKLTTLDISRNSFDSSFPPGISKLKFLKVFNAFSNNFEGLLPSDVSRLRFLEELNFGG 186
Query: 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLG 242
SYF G IP+ +G + L+F+HLAGN+L ++P LG+L + HMEIGYN + GNIP +
Sbjct: 187 SYFEGEIPAAYGGLQRLKFIHLAGNVLGGKLPPRLGLLTELQHMEIGYNHFNGNIPSEFA 246
Query: 243 NMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSD 302
+S ++Y D++ +LSGS+P+EL NL+ LE+LFLF+N G++P +S + +LK LD S
Sbjct: 247 LLSNLKYFDVSNCSLSGSLPQELGNLSNLETLFLFQNGFTGEIPESYSNLKSLKLLDFSS 306
Query: 303 NRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLG 362
N+LSG IP F+ LKNL LSL+ N +SG VPE + +LP L LF+WNN F+G LP LG
Sbjct: 307 NQLSGSIPSGFSTLKNLTWLSLISNNLSGEVPEGIGELPELTTLFLWNNNFTGVLPHKLG 366
Query: 363 RNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTG 403
N KL +DVS N+F G+IP +C G L+KLILFSN F G
Sbjct: 367 SNGKLETMDVSNNSFTGTIPSSLCHGNKLYKLILFSNMFEG 407
|
|
| TAIR|locus:2163665 MOL1 "MORE LATERAL GROWTH1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1371 (487.7 bits), Expect = 3.9e-140, P = 3.9e-140
Identities = 266/404 (65%), Positives = 325/404 (80%)
Query: 5 HCLYLNLFIWLVFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFV-PPGVNPAGKIYAC 63
H + F +F+ V+A +P +E+LL+LKS+L D+FNSL DWF+ P V+ + C
Sbjct: 6 HNKLCSFFYLCLFLTLVAAAEPQTESLLTLKSQLTDNFNSLKDWFINTPEVSD-NLVACC 64
Query: 64 SWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIF- 122
SWSGV+CN+N+T VV ++LS K L+G+L GK +F EL++LN+S NSFSG+FP EIF
Sbjct: 65 SWSGVRCNQNSTSVVSVDLSSKNLAGSLSGKEFLVF-TELLELNISDNSFSGEFPAEIFF 123
Query: 123 NLTSLISLDISRNNFSGHFP---GGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179
N+T+L SLDISRNNFSG FP GG SL+NL+ LDA SNSFSG +P +SQLE+LKVLN
Sbjct: 124 NMTNLRSLDISRNNFSGRFPDGNGGDSSLKNLIFLDALSNSFSGPLPIHLSQLENLKVLN 183
Query: 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPW 239
LAGSYF+G IPSQ+GSFK+LEFLHL GNLL+ IP ELG L T+THMEIGYN Y+G IPW
Sbjct: 184 LAGSYFTGSIPSQYGSFKNLEFLHLGGNLLSGHIPQELGNLTTLTHMEIGYNSYEGVIPW 243
Query: 240 QLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLD 299
++G MSE++YLDIAGANLSG +PK SNLTKLESLFLFRN L+ ++PWE +T+L +LD
Sbjct: 244 EIGYMSELKYLDIAGANLSGFLPKHFSNLTKLESLFLFRNHLSREIPWELGEITSLVNLD 303
Query: 300 LSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPE 359
LSDN +SG IPESF+ LKNLRLL+LM+NEMSGT+PE + QLPSL+ LFIWNNYFSGSLP+
Sbjct: 304 LSDNHISGTIPESFSGLKNLRLLNLMFNEMSGTLPEVIAQLPSLDTLFIWNNYFSGSLPK 363
Query: 360 NLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTG 403
+LG NSKLRWVDVSTN+F G IP ICS GVLFKLILFSNNFTG
Sbjct: 364 SLGMNSKLRWVDVSTNSFQGEIPQGICSRGVLFKLILFSNNFTG 407
|
|
| TAIR|locus:2139885 AT4G28650 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 750 (269.1 bits), Expect = 4.7e-116, Sum P(2) = 4.7e-116
Identities = 165/400 (41%), Positives = 246/400 (61%)
Query: 11 LFIWLVFVPAVSAN----DPYSE--ALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACS 64
LF++ ++ + S+ D +E LLS+KS LVD N L DW + + C+
Sbjct: 8 LFLYYCYIGSTSSVLASIDNVNELSVLLSVKSTLVDPLNFLKDWKLSDTSDH------CN 61
Query: 65 WSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNL 124
W+GV+CN N V ++L+ L+G + ++ + LV N+S N F P I
Sbjct: 62 WTGVRCNSNGN-VEKLDLAGMNLTGKISDSISQL--SSLVSFNISCNGFESLLPKSI--- 115
Query: 125 TSLISLDISRNNFSGH-FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 183
L S+DIS+N+FSG F +SL L+ L+A N+ SG++ ++ L L+VL+L G+
Sbjct: 116 PPLKSIDISQNSFSGSLFLFSNESL-GLVHLNASGNNLSGNLTEDLGNLVSLEVLDLRGN 174
Query: 184 YFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGN 243
+F G +PS F + + L FL L+GN L ++P+ LG L ++ +GYN ++G IP + GN
Sbjct: 175 FFQGSLPSSFKNLQKLRFLGLSGNNLTGELPSVLGQLPSLETAILGYNEFKGPIPPEFGN 234
Query: 244 MSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDN 303
++ ++YLD+A LSG IP EL L LE+L L+ N G +P E +TTLK LD SDN
Sbjct: 235 INSLKYLDLAIGKLSGEIPSELGKLKSLETLLLYENNFTGTIPREIGSITTLKVLDFSDN 294
Query: 304 RLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGR 363
L+G IP LKNL+LL+LM N++SG++P ++ L L++L +WNN SG LP +LG+
Sbjct: 295 ALTGEIPMEITKLKNLQLLNLMRNKLSGSIPPAISSLAQLQVLELWNNTLSGELPSDLGK 354
Query: 364 NSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTG 403
NS L+W+DVS+N+F+G IP +C+ G L KLILF+N FTG
Sbjct: 355 NSPLQWLDVSSNSFSGEIPSTLCNKGNLTKLILFNNTFTG 394
|
|
| TAIR|locus:2025545 AT1G08590 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 793 (284.2 bits), Expect = 1.3e-113, Sum P(2) = 1.3e-113
Identities = 160/401 (39%), Positives = 245/401 (61%)
Query: 3 IFHCLYLNLFIWLVFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYA 62
+F Y F FV + + + E LL+ KS+L D N+L DW P ++
Sbjct: 6 LFFLFYYIGFALFPFVSSETFQNSEQEILLAFKSDLFDPSNNLQDWKRPENATTFSELVH 65
Query: 63 CSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIF 122
C W+GV C+ N V + LS LSG + + F L L+LS+N+F P +
Sbjct: 66 CHWTGVHCDANG-YVAKLLLSNMNLSGNVSDQIQS--FPSLQALDLSNNAFESSLPKSLS 122
Query: 123 NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182
NLTSL +D+S N+F G FP G+ L ++A SN+FSG +P ++ L+VL+ G
Sbjct: 123 NLTSLKVIDVSVNSFFGTFPYGLGMATGLTHVNASSNNFSGFLPEDLGNATTLEVLDFRG 182
Query: 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLG 242
YF G +PS F + K+L+FL L+GN ++P +G L ++ + +GYN + G IP + G
Sbjct: 183 GYFEGSVPSSFKNLKNLKFLGLSGNNFGGKVPKVIGELSSLETIILGYNGFMGEIPEEFG 242
Query: 243 NMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSD 302
++ +QYLD+A NL+G IP L L +L +++L++N+L G++P E +T+L LDLSD
Sbjct: 243 KLTRLQYLDLAVGNLTGQIPSSLGQLKQLTTVYLYQNRLTGKLPRELGGMTSLVFLDLSD 302
Query: 303 NRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLG 362
N+++G IP +LKNL+LL+LM N+++G +P + +LP+LE+L +W N GSLP +LG
Sbjct: 303 NQITGEIPMEVGELKNLQLLNLMRNQLTGIIPSKIAELPNLEVLELWQNSLMGSLPVHLG 362
Query: 363 RNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTG 403
+NS L+W+DVS+N +G IP +C L KLILF+N+F+G
Sbjct: 363 KNSPLKWLDVSSNKLSGDIPSGLCYSRNLTKLILFNNSFSG 403
|
|
| TAIR|locus:2169965 BAM1 "BARELY ANY MERISTEM 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 749 (268.7 bits), Expect = 1.3e-113, Sum P(2) = 1.3e-113
Identities = 178/456 (39%), Positives = 261/456 (57%)
Query: 9 LNLFIWLVFVPAVS----ANDPYSE--ALLSLKSELV---DDFNS-LHDWFVPPGVNPAG 58
+ LF+ L+F+ +S A+ P SE ALLSLK+ L DD NS L W V
Sbjct: 1 MKLFLLLLFLLHISHTFTASRPISEFRALLSLKTSLTGAGDDKNSPLSSWKVSTSF---- 56
Query: 59 KIYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFP 118
C+W GV C+ + V ++LS LSG L P L +L+L+ N SG P
Sbjct: 57 ----CTWIGVTCDVSRRHVTSLDLSGLNLSGTL--SPDVSHLRLLQNLSLAENLISGPIP 110
Query: 119 VEIFNLTSLISLDISRNNFSGHFPGGIQS-LRNLLVLDAFSNSFSGSVPAEISQLEHLKV 177
EI +L+ L L++S N F+G FP I S L NL VLD ++N+ +G +P ++ L L+
Sbjct: 111 PEISSLSGLRHLNLSNNVFNGSFPDEISSGLVNLRVLDVYNNNLTGDLPVSVTNLTQLRH 170
Query: 178 LNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGY-NFYQGN 236
L+L G+YF+G IP +GS+ +E+L ++GN L +IP E+G L T+ + IGY N ++
Sbjct: 171 LHLGGNYFAGKIPPSYGSWPVIEYLAVSGNELVGKIPPEIGNLTTLRELYIGYYNAFEDG 230
Query: 237 IPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLK 296
+P ++GN+SE+ D A L+G IP E+ L KL++LFL N +G + WE +++LK
Sbjct: 231 LPPEIGNLSELVRFDGANCGLTGEIPPEIGKLQKLDTLFLQVNVFSGPLTWELGTLSSLK 290
Query: 297 SLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGS 356
S+DLS+N +G IP SFA+LKNL LL+L N++ G +PE + LP LE+L +W N F+GS
Sbjct: 291 SMDLSNNMFTGEIPASFAELKNLTLLNLFRNKLHGEIPEFIGDLPELEVLQLWENNFTGS 350
Query: 357 LPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIVMXXXXXXXXXX 416
+P+ LG N KL VD+S+N G++PP++CSG L LI N G +
Sbjct: 351 IPQKLGENGKLNLVDLSSNKLTGTLPPNMCSGNKLETLITLGNFLFGSIPDSLGKCESLT 410
Query: 417 XXRRGGKGHWKMI--SFLGLPQFTANDVLRSFNSTE 450
R G I GLP+ T ++ ++ S E
Sbjct: 411 RIRMGENFLNGSIPKGLFGLPKLTQVELQDNYLSGE 446
|
|
| UNIPROTKB|Q5Z9N5 P0481E08.42 "Os06g0717200 protein" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 660 (237.4 bits), Expect = 2.9e-97, Sum P(2) = 2.9e-97
Identities = 152/406 (37%), Positives = 238/406 (58%)
Query: 11 LFIWLVFVPAVSANDPYSEALLSLKSELVDDFNS-----LHDWFVPPGVNPAGKIYACSW 65
L + L+ P++++ D AL LK+ LV ++ L DW P +PA C++
Sbjct: 6 LLLLLLLPPSLASPDRDIYALAKLKAALVPSPSATAPPPLADWD-PAATSPAH----CTF 60
Query: 66 SGVKCNKNNTIVVGINLSMKGL-SGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNL 124
SGV C+ + VV INL+ L SG LP P + L +L ++ G P+E+ L
Sbjct: 61 SGVTCDGRSR-VVAINLTALPLHSGYLP--PEIALLDSLANLTIAACCLPGHVPLELPTL 117
Query: 125 TSLISLDISRNNFSGHFP----GGIQS--LRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 178
SL L++S NN SGHFP GG S +L ++DA++N+ SG +P + L+ L
Sbjct: 118 PSLRHLNLSNNNLSGHFPVPDSGGGASPYFPSLELIDAYNNNLSGLLPPFSASHARLRYL 177
Query: 179 NLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGY-NFYQGNI 237
+L G+YF+G IP +G +LE+L L GN L+ +P L L + M IGY N Y G +
Sbjct: 178 HLGGNYFTGAIPDSYGDLAALEYLGLNGNTLSGHVPVSLSRLTRLREMYIGYYNQYDGGV 237
Query: 238 PWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKS 297
P + G++ + LD++ NL+G +P EL L +L++LFL N+L+G++P + +++L S
Sbjct: 238 PPEFGDLGALLRLDMSSCNLTGPVPPELGRLQRLDTLFLQWNRLSGEIPPQLGDLSSLAS 297
Query: 298 LDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSL 357
LDLS N L+G IP S A+L NL+LL+L N + G++P+ + LE+L +W+N +G++
Sbjct: 298 LDLSVNDLAGEIPPSLANLSNLKLLNLFRNHLRGSIPDFVAGFAQLEVLQLWDNNLTGNI 357
Query: 358 PENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTG 403
P LG+N +L+ +D++TN+ G IP D+C+G L L+L N G
Sbjct: 358 PAGLGKNGRLKTLDLATNHLTGPIPADLCAGRRLEMLVLMENGLFG 403
|
|
| TAIR|locus:2032553 HSL1 "HAESA-like 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 581 (209.6 bits), Expect = 6.4e-85, Sum P(2) = 6.4e-85
Identities = 139/400 (34%), Positives = 218/400 (54%)
Query: 7 LYLNLFIWLVFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACSWS 66
+YL LF++L+F S N L +K L D + L W N A C WS
Sbjct: 1 MYL-LFLFLLFPTVFSLNQD-GFILQQVKLSLDDPDSYLSSW----NSNDASP---CRWS 51
Query: 67 GVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTS 126
GV C + + V ++LS L+G P R+ + L L+L +NS + P+ I S
Sbjct: 52 GVSCAGDFSSVTSVDLSSANLAGPFPSVICRL--SNLAHLSLYNNSINSTLPLNIAACKS 109
Query: 127 LISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFS 186
L +LD+S+N +G P + + L+ LD N+FSG +PA + E+L+VL+L +
Sbjct: 110 LQTLDLSQNLLTGELPQTLADIPTLVHLDLTGNNFSGDIPASFGKFENLEVLSLVYNLLD 169
Query: 187 GPIPSQFGSFKSLEFLHLAGNLLN-DQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMS 245
G IP G+ +L+ L+L+ N + +IP E G L + M + G IP LG +S
Sbjct: 170 GTIPPFLGNISTLKMLNLSYNPFSPSRIPPEFGNLTNLEVMWLTECHLVGQIPDSLGQLS 229
Query: 246 EVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRL 305
++ LD+A +L G IP L LT + + L+ N L G++P E + +L+ LD S N+L
Sbjct: 230 KLVDLDLALNDLVGHIPPSLGGLTNVVQIELYNNSLTGEIPPELGNLKSLRLLDASMNQL 289
Query: 306 SGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNS 365
+G IP+ + L L+L N + G +P S+ P+L + I+ N +G LP++LG NS
Sbjct: 290 TGKIPDELCRVP-LESLNLYENNLEGELPASIALSPNLYEIRIFGNRLTGGLPKDLGLNS 348
Query: 366 KLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIV 405
LRW+DVS N F+G +P D+C+ G L +L++ N+F+G++
Sbjct: 349 PLRWLDVSENEFSGDLPADLCAKGELEELLIIHNSFSGVI 388
|
|
| TAIR|locus:2169975 HSL2 "HAESA-like 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 528 (190.9 bits), Expect = 1.8e-84, Sum P(3) = 1.8e-84
Identities = 137/402 (34%), Positives = 221/402 (54%)
Query: 8 YLNLFIWLVFVPAVSANDPYSEALLSLK-SELVDDFNSLHDWFVPPGVNPAGKIYACSWS 66
+L+L + F+ S D +E L +K + L D +L DW + G N + C+W+
Sbjct: 10 FLSLLLLSCFLQVSSNGD--AEILSRVKKTRLFDPDGNLQDWVIT-GDNRS----PCNWT 62
Query: 67 GVKCN--KNNTIVVG-INLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFN 123
G+ C+ K +++ V I+LS +SG P RI L+++ LS N+ +G +
Sbjct: 63 GITCHIRKGSSLAVTTIDLSGYNISGGFPYGFCRI--RTLINITLSQNNLNGTIDSAPLS 120
Query: 124 LTS-LISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182
L S L +L +++NNFSG P R L VL+ SN F+G +P +L L+VLNL G
Sbjct: 121 LCSKLQNLILNQNNFSGKLPEFSPEFRKLRVLELESNLFTGEIPQSYGRLTALQVLNLNG 180
Query: 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQ-IPAELGMLKTVTHMEIGYNFYQGNIPWQL 241
+ SG +P+ G L L LA + IP+ LG L +T + + ++ G IP +
Sbjct: 181 NPLSGIVPAFLGYLTELTRLDLAYISFDPSPIPSTLGNLSNLTDLRLTHSNLVGEIPDSI 240
Query: 242 GNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLS 301
N+ ++ LD+A +L+G IP+ + L + + L+ N+L+G++P +T L++ D+S
Sbjct: 241 MNLVLLENLDLAMNSLTGEIPESIGRLESVYQIELYDNRLSGKLPESIGNLTELRNFDVS 300
Query: 302 DNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENL 361
N L+G +PE A L+ L +L N +G +P+ + P+L I+NN F+G+LP NL
Sbjct: 301 QNNLTGELPEKIAALQ-LISFNLNDNFFTGGLPDVVALNPNLVEFKIFNNSFTGTLPRNL 359
Query: 362 GRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTG 403
G+ S++ DVSTN F+G +PP +C L K+I FSN +G
Sbjct: 360 GKFSEISEFDVSTNRFSGELPPYLCYRRKLQKIITFSNQLSG 401
|
|
| TAIR|locus:2005540 HAE "HAESA" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 574 (207.1 bits), Expect = 5.7e-83, Sum P(2) = 5.7e-83
Identities = 144/405 (35%), Positives = 220/405 (54%)
Query: 3 IFHCLYLNLFIWLVFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYA 62
+ +CL L L + ++P++S N + L K L D SL W V P
Sbjct: 1 MLYCLILLLCLSSTYLPSLSLNQD-ATILRQAKLGLSDPAQSLSSWSDNNDVTP------ 53
Query: 63 CSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIF 122
C W GV C+ + VV ++LS L G P + L L+L +NS +G + F
Sbjct: 54 CKWLGVSCDATSN-VVSVDLSSFMLVGPFPS--ILCHLPSLHSLSLYNNSINGSLSADDF 110
Query: 123 NLT-SLISLDISRNNFSGHFPGGIQ-SLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180
+ +LISLD+S N G P + +L NL L+ N+ S ++P+ + L+ LNL
Sbjct: 111 DTCHNLISLDLSENLLVGSIPKSLPFNLPNLKFLEISGNNLSDTIPSSFGEFRKLESLNL 170
Query: 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLN-DQIPAELGMLKTVTHMEI-GYNFYQGNIP 238
AG++ SG IP+ G+ +L+ L LA NL + QIP++LG L + + + G N G IP
Sbjct: 171 AGNFLSGTIPASLGNVTTLKELKLAYNLFSPSQIPSQLGNLTELQVLWLAGCNLV-GPIP 229
Query: 239 WQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSL 298
L ++ + LD+ L+GSIP ++ L +E + LF N +G++P +TTLK
Sbjct: 230 PSLSRLTSLVNLDLTFNQLTGSIPSWITQLKTVEQIELFNNSFSGELPESMGNMTTLKRF 289
Query: 299 DLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLP 358
D S N+L+G IP++ +L NL L+L N + G +PES+ + +L L ++NN +G LP
Sbjct: 290 DASMNKLTGKIPDNL-NLLNLESLNLFENMLEGPLPESITRSKTLSELKLFNNRLTGVLP 348
Query: 359 ENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTG 403
LG NS L++VD+S N F+G IP ++C G L LIL N+F+G
Sbjct: 349 SQLGANSPLQYVDLSYNRFSGEIPANVCGEGKLEYLILIDNSFSG 393
|
|
| TAIR|locus:2138268 AT4G08850 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 539 (194.8 bits), Expect = 3.5e-81, Sum P(2) = 3.5e-81
Identities = 132/388 (34%), Positives = 200/388 (51%)
Query: 20 AVSANDPYSEALLSLKSELVDDFNS--LHDWFVPPGVNPAGKIYACSWSGVKCNKNNTIV 77
AVSA + ALL KS + +S L W VNP + SW GV C+ + +
Sbjct: 43 AVSATVEEANALLKWKSTFTNQTSSSKLSSW-----VNPNTSSFCTSWYGVACSLGS--I 95
Query: 78 VGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNF 137
+ +NL+ G+ G P N L ++LS N FSG + L D+S N
Sbjct: 96 IRLNLTNTGIEGTFEDFPFSSLPN-LTFVDLSMNRFSGTISPLWGRFSKLEYFDLSINQL 154
Query: 138 SGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFK 197
G P + L NL L N +GS+P+EI +L + + + + +GPIPS FG+
Sbjct: 155 VGEIPPELGDLSNLDTLHLVENKLNGSIPSEIGRLTKVTEIAIYDNLLTGPIPSSFGNLT 214
Query: 198 SLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANL 257
L L+L N L+ IP+E+G L + + + N G IP GN+ V L++ L
Sbjct: 215 KLVNLYLFINSLSGSIPSEIGNLPNLRELCLDRNNLTGKIPSSFGNLKNVTLLNMFENQL 274
Query: 258 SGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLK 317
SG IP E+ N+T L++L L N+L G +P + TL L L N+L+G IP +++
Sbjct: 275 SGEIPPEIGNMTALDTLSLHTNKLTGPIPSTLGNIKTLAVLHLYLNQLNGSIPPELGEME 334
Query: 318 NLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNF 377
++ L + N+++G VP+S +L +LE LF+ +N SG +P + +++L + + TNNF
Sbjct: 335 SMIDLEISENKLTGPVPDSFGKLTALEWLFLRDNQLSGPIPPGIANSTELTVLQLDTNNF 394
Query: 378 NGSIPPDICSGGVLFKLILFSNNFTGIV 405
G +P IC GG L L L N+F G V
Sbjct: 395 TGFLPDTICRGGKLENLTLDDNHFEGPV 422
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.7.11.1 | LOW CONFIDENCE prediction! |
| 3rd Layer | 2.7.11 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00005619001 | SubName- Full=Chromosome undetermined scaffold_155, whole genome shotgun sequence; (972 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 710 | |||
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-94 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 3e-70 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-44 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 4e-43 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 8e-19 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 3e-16 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 6e-16 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 1e-15 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 3e-15 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 3e-15 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 4e-15 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 9e-15 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 3e-14 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 4e-14 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 8e-14 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 2e-13 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 1e-12 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 1e-12 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 3e-12 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 5e-11 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 6e-11 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 6e-11 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 2e-10 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 8e-10 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-09 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 2e-09 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 3e-09 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 4e-09 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 5e-09 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 1e-08 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 1e-08 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-08 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 3e-08 | |
| cd05111 | 279 | cd05111, PTK_HER3, Pseudokinase domain of the Prot | 3e-08 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 4e-08 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 5e-08 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 5e-08 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 6e-08 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 7e-08 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 7e-08 | |
| cd06635 | 317 | cd06635, STKc_TAO1, Catalytic domain of the Protei | 8e-08 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 8e-08 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 9e-08 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 1e-07 | |
| cd05047 | 270 | cd05047, PTKc_Tie, Catalytic domain of Tie Protein | 1e-07 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 2e-07 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 2e-07 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 2e-07 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 3e-07 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 4e-07 | |
| cd06607 | 307 | cd06607, STKc_TAO, Catalytic domain of the Protein | 4e-07 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 5e-07 | |
| cd06633 | 313 | cd06633, STKc_TAO3, Catalytic domain of the Protei | 6e-07 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 1e-06 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 3e-06 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 3e-06 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 4e-06 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 6e-06 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 7e-06 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 9e-06 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 1e-05 | |
| cd06634 | 308 | cd06634, STKc_TAO2, Catalytic domain of the Protei | 2e-05 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 2e-05 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 2e-05 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 3e-05 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 3e-05 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 4e-05 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 4e-05 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 4e-05 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 5e-05 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 6e-05 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 6e-05 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 9e-05 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 1e-04 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 1e-04 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 2e-04 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 2e-04 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 2e-04 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 2e-04 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 2e-04 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 2e-04 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 2e-04 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 2e-04 | |
| pfam08263 | 42 | pfam08263, LRRNT_2, Leucine rich repeat N-terminal | 2e-04 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 3e-04 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 3e-04 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 3e-04 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 3e-04 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 6e-04 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 6e-04 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 6e-04 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 7e-04 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 0.001 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 0.002 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 0.002 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 0.002 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 0.002 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 0.003 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 0.003 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 0.003 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 0.003 | |
| cd06625 | 263 | cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ | 0.003 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 0.004 | |
| cd07865 | 310 | cd07865, STKc_CDK9, Catalytic domain of the Serine | 0.004 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 313 bits (804), Expect = 2e-94
Identities = 167/400 (41%), Positives = 239/400 (59%), Gaps = 14/400 (3%)
Query: 5 HCLYLNLFIWLVFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACS 64
HC YL ++ +F+ + E LLS KS + D L +W N + + C
Sbjct: 8 HCPYLIFMLFFLFLNFSMLHAEELELLLSFKSSINDPLKYLSNW------NSSADV--CL 59
Query: 65 WSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNL 124
W G+ CN N++ VV I+LS K +SG + R+ + + + NLS+N SG P +IF
Sbjct: 60 WQGITCN-NSSRVVSIDLSGKNISGKISSAIFRLPYIQTI--NLSNNQLSGPIPDDIFTT 116
Query: 125 T-SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 183
+ SL L++S NNF+G P G S+ NL LD +N SG +P +I LKVL+L G+
Sbjct: 117 SSSLRYLNLSNNNFTGSIPRG--SIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGN 174
Query: 184 YFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGN 243
G IP+ + SLEFL LA N L QIP ELG +K++ + +GYN G IP+++G
Sbjct: 175 VLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGG 234
Query: 244 MSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDN 303
++ + +LD+ NL+G IP L NL L+ LFL++N+L+G +P + L SLDLSDN
Sbjct: 235 LTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDN 294
Query: 304 RLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGR 363
LSG IPE L+NL +L L N +G +P +L LP L++L +W+N FSG +P+NLG+
Sbjct: 295 SLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGK 354
Query: 364 NSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTG 403
++ L +D+STNN G IP +CS G LFKLILFSN+ G
Sbjct: 355 HNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEG 394
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 247 bits (631), Expect = 3e-70
Identities = 202/693 (29%), Positives = 311/693 (44%), Gaps = 93/693 (13%)
Query: 87 LSGALPGKPLRIF-FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGI 145
LSG +P IF +L+ L+LS NS SG+ P + L +L L + NNF+G P +
Sbjct: 272 LSGPIPPS---IFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVAL 328
Query: 146 QSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLA 205
SL L VL +SN FSG +P + + +L VL+L+ + +G IP S +L L L
Sbjct: 329 TSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILF 388
Query: 206 GNLLNDQIPAELGM------------------------LKTVTHMEIGYNFYQGNIPWQL 241
N L +IP LG L V ++I N QG I +
Sbjct: 389 SNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRK 448
Query: 242 GNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLS 301
+M +Q L +A G +P + +LE+L L RNQ +G VP + ++ L L LS
Sbjct: 449 WDMPSLQMLSLARNKFFGGLP-DSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLS 507
Query: 302 DNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENL 361
+N+LSG IP+ + K L L L +N++SG +P S ++P L L + N SG +P+NL
Sbjct: 508 ENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNL 567
Query: 362 GRNSKLRWVDVSTNNFNGSIPPD-----ICSGGVLFKLILFSNNFTG------------- 403
G L V++S N+ +GS+P I + V + L + T
Sbjct: 568 GNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPS 627
Query: 404 --------IVMFIAAALLGI-FFFRRGGK-----------GHWKMISFLG--LPQFTAND 441
+ F+ AL+ F F RG G W++ F T ND
Sbjct: 628 WWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITIND 687
Query: 442 VLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHK 501
+L S + ++ K++ G+ VK+I I S I +G ++H
Sbjct: 688 ILSSLKEENVISRGKKGASYKGKSIK-NGMQFVVKEIN---DVNSIPSSEIADMGKLQHP 743
Query: 502 NLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYP 561
N+++L+G C + AYL+++Y+ NLSE +R W + KI +G+A+ L FLH C P
Sbjct: 744 NIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN-LSWERRRKIAIGIAKALRFLHCRCSP 802
Query: 562 AIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM 621
A+ G+L I+ D EPHL L F + + E+
Sbjct: 803 AVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFISSAYVAPETRETKDITEK--S 859
Query: 622 DVYGFGEIILEILT-----------NGRLTN-AGSSLQNKPIDGLLGEMYNENEVGSSSS 669
D+YGFG I++E+LT +G + A + +D + + S
Sbjct: 860 DIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGD----VSV 915
Query: 670 LQDEIKLVLDVALLCTRSTPSDRPSMEEALKLL 702
Q+EI V+++AL CT + P+ RP + LK L
Sbjct: 916 NQNEIVEVMNLALHCTATDPTARPCANDVLKTL 948
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Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 171 bits (435), Expect = 2e-44
Identities = 101/298 (33%), Positives = 157/298 (52%), Gaps = 1/298 (0%)
Query: 108 LSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPA 167
L +N+ SG+ P EI LTSL LD+ NN +G P + +L+NL L + N SG +P
Sbjct: 219 LGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPP 278
Query: 168 EISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHME 227
I L+ L L+L+ + SG IP ++LE LHL N +IP L L + ++
Sbjct: 279 SIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQ 338
Query: 228 IGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPW 287
+ N + G IP LG + + LD++ NL+G IP+ L + L L LF N L G++P
Sbjct: 339 LWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPK 398
Query: 288 EFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILF 347
+L+ + L DN SG +P F L + L + N + G + +PSL++L
Sbjct: 399 SLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLS 458
Query: 348 IWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIV 405
+ N F G LP++ G + +L +D+S N F+G++P + S L +L L N +G +
Sbjct: 459 LARNKFFGGLPDSFG-SKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEI 515
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 167 bits (425), Expect = 4e-43
Identities = 108/324 (33%), Positives = 168/324 (51%), Gaps = 3/324 (0%)
Query: 80 INLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG 139
I L LSG +P + + L L+L +N+ +G P + NL +L L + +N SG
Sbjct: 217 IYLGYNNLSGEIPYEIGGL--TSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSG 274
Query: 140 HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSL 199
P I SL+ L+ LD NS SG +P + QL++L++L+L + F+G IP S L
Sbjct: 275 PIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRL 334
Query: 200 EFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259
+ L L N + +IP LG +T +++ N G IP L + + L + +L G
Sbjct: 335 QVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEG 394
Query: 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNL 319
IPK L L + L N +G++P EF+++ + LD+S+N L G I D+ +L
Sbjct: 395 EIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSL 454
Query: 320 RLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNG 379
++LSL N+ G +P+S LE L + N FSG++P LG S+L + +S N +G
Sbjct: 455 QMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSG 513
Query: 380 SIPPDICSGGVLFKLILFSNNFTG 403
IP ++ S L L L N +G
Sbjct: 514 EIPDELSSCKKLVSLDLSHNQLSG 537
|
Length = 968 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 86.5 bits (215), Expect = 8e-19
Identities = 67/256 (26%), Positives = 104/256 (40%), Gaps = 46/256 (17%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITR----IGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524
TG V+VK + + + R + + H N++RL+ ++ YL+ +Y
Sbjct: 23 TGKIVAVKIL-KKRSEKSKKDQTARREIRILRRLSHPNIVRLIDAFEDKDHLYLVMEYCE 81
Query: 525 NGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 581
G+L + + + AK KI L + RGL +LH + I H DLK NI+ DEN
Sbjct: 82 GGDLFDYLSRGGPLSEDEAK-KIALQILRGLEYLHSN---GIIHRDLKPENILLDENGVV 137
Query: 582 HLAEFGFKYLTQLADGSFPAKIAWTESGEF--------YNA----MKEEMY---MDVYGF 626
+A+FG AK S Y A + Y +DV+
Sbjct: 138 KIADFGL------------AKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSL 185
Query: 627 GEIILEILTNGRL--TNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 684
G +IL L G+ + Q + I +LG +E SS ++ L+ C
Sbjct: 186 G-VILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEAKDLIKK----C 240
Query: 685 TRSTPSDRPSMEEALK 700
PS RP+ EE L+
Sbjct: 241 LNKDPSKRPTAEEILQ 256
|
Length = 260 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 78.7 bits (195), Expect = 3e-16
Identities = 64/254 (25%), Positives = 107/254 (42%), Gaps = 43/254 (16%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525
+ V+VK ++ A+ +I EF+ + H N+++LLG C Y++ +Y+
Sbjct: 27 KKVEVAVKTLKEDASEQQI-EEFLREARIMRKLDHPNVVKLLGVCTEEEPLYIVMEYMEG 85
Query: 526 GNLSEKIRTKRD---WAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 582
G+L +R R + L +ARG+ +L + I H DL A N + EN+
Sbjct: 86 GDLLSYLRKNRPKLSLSDLLSFALQIARGMEYLESKNF--I-HRDLAARNCLVGENLVVK 142
Query: 583 LAEFGF-------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGEII 630
+++FG Y + G P I W ES G+F + DV+ FG ++
Sbjct: 143 ISDFGLSRDLYDDDYYRK-RGGKLP--IRWMAPESLKEGKFTSK------SDVWSFGVLL 193
Query: 631 LEILTNGRLTNAGSSLQNKPIDGLLG-EMYNENEVGSSSSLQDEI-KLVLDVALLCTRST 688
EI T G +P G+ E+ + G + D+ L C
Sbjct: 194 WEIFTLGE----------QPYPGMSNEEVLEYLKNGYRLPQPPNCPPELYDLMLQCWAED 243
Query: 689 PSDRPSMEEALKLL 702
P DRP+ E +++L
Sbjct: 244 PEDRPTFSELVEIL 257
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 76.9 bits (190), Expect = 6e-16
Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 26/181 (14%)
Query: 469 TGITVSVKKI---EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525
TG V++K I + + +++ E I + + H N+++L G + + YL+ +Y
Sbjct: 17 TGKKVAIKIIKKEDSSSLLEELLRE-IEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEG 75
Query: 526 GNLSEKIRTKR---DWAAKYKIVLGVARGLCFLH-HDCYPAIPHGDLKASNIVFDE-NME 580
G+L + ++ +I+L + GL +LH + I H DLK NI+ D N +
Sbjct: 76 GSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNG----IIHRDLKPENILLDSDNGK 131
Query: 581 PHLAEFGF-KYLTQLADGSFPAKIAWTESGEFYNA---MKEEMY----MDVYGFGEIILE 632
LA+FG K LT D S I T Y A + + Y D++ G I+ E
Sbjct: 132 VKLADFGLSKLLTS--DKSLLKTIVGT---PAYMAPEVLLGKGYYSEKSDIWSLGVILYE 186
Query: 633 I 633
+
Sbjct: 187 L 187
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 76.8 bits (190), Expect = 1e-15
Identities = 63/256 (24%), Positives = 106/256 (41%), Gaps = 44/256 (17%)
Query: 468 PTGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524
+ V+VK ++ A+ +I EF+ + H N+++LLG C ++ +Y+P
Sbjct: 26 GKEVEVAVKTLKEDASEQQI-EEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMP 84
Query: 525 NGNLSEKIRTKRD----WAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580
G+L + +R R + L +ARG+ +L + I H DL A N + EN+
Sbjct: 85 GGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNF--I-HRDLAARNCLVGENLV 141
Query: 581 PHLAEFGF-------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGE 628
+++FG Y G P I W ES G+F + DV+ FG
Sbjct: 142 VKISDFGLSRDLYDDDYYKV-KGGKLP--IRWMAPESLKEGKFTSK------SDVWSFGV 192
Query: 629 IILEILTNGRLTNAGSSLQNKPIDGLLG-EMYNENEVGSSSSLQDEI-KLVLDVALLCTR 686
++ EI T G +P G+ E+ + G + + L C
Sbjct: 193 LLWEIFTLGE----------EPYPGMSNAEVLEYLKKGYRLPKPPNCPPELYKLMLQCWA 242
Query: 687 STPSDRPSMEEALKLL 702
P DRP+ E +++L
Sbjct: 243 EDPEDRPTFSELVEIL 258
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 79.1 bits (195), Expect = 3e-15
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 279 NQ-LAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESL 337
NQ L G +P + S++ L+S++LS N + G IP S + +L +L L YN +G++PESL
Sbjct: 427 NQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESL 486
Query: 338 VQLPSLEILFIWNNYFSGSLPENLG 362
QL SL IL + N SG +P LG
Sbjct: 487 GQLTSLRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 76.0 bits (188), Expect = 3e-15
Identities = 59/272 (21%), Positives = 104/272 (38%), Gaps = 70/272 (25%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525
V+VK ++ A+ + +F+ + H N++RLLG C YL+ +Y+
Sbjct: 22 KTTEVAVKTLKEDASEEER-KDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80
Query: 526 GNLSEKIRTKRDWAA-----------KYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIV 574
G+L + +R R + +A+G+ +L H DL A N +
Sbjct: 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS---KKFVHRDLAARNCL 137
Query: 575 FDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ESGEFYNAMKEEMYM---D 622
E++ +++FG Y + G P + W ES +K+ ++ D
Sbjct: 138 VGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIR--WMAPES------LKDGIFTSKSD 189
Query: 623 VYGFGEIILEILTNGRLTNAGSSLQN------------KPIDGLLGEMYNENEVGSSSSL 670
V+ FG ++ EI T G G S + KP + E+Y
Sbjct: 190 VWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKP-EYCPDELY----------- 237
Query: 671 QDEIKLVLDVALLCTRSTPSDRPSMEEALKLL 702
++ L C + P DRP+ E ++ L
Sbjct: 238 --------ELMLSCWQLDPEDRPTFSELVERL 261
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 75.6 bits (187), Expect = 4e-15
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 58/257 (22%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525
T V+VK ++ GA+ + EF+ + H N++RLLG C Y++ +Y+P
Sbjct: 27 TETKVAVKTLKEGASEEER-EEFLEEASIMKKLSHPNIVRLLGVCTQGEPLYIVTEYMPG 85
Query: 526 GNLSEKIRTKRD---WAAKYKIVLGVARGLCFLH-HDCYPAIPHGDLKASNIVFDENMEP 581
G+L + +R + ++ L +A+G+ +L + H DL A N + EN+
Sbjct: 86 GDLLDFLRKHGEKLTLKDLLQMALQIAKGMEYLESKNF----VHRDLAARNCLVTENLVV 141
Query: 582 HLAEFG-------FKYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGEI 629
+++FG Y + G P I W ES G+F + DV+ FG +
Sbjct: 142 KISDFGLSRDIYEDDYYRKRGGGKLP--IKWMAPESLKDGKFTSK------SDVWSFGVL 193
Query: 630 ILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL---------VLDV 680
+ EI T G G S + E+ L+D +L + ++
Sbjct: 194 LWEIFTLGEQPYPGMSNE---------EVLE--------LLEDGYRLPRPENCPDELYEL 236
Query: 681 ALLCTRSTPSDRPSMEE 697
L C P DRP+ E
Sbjct: 237 MLQCWAYDPEDRPTFSE 253
|
Length = 258 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 74.5 bits (184), Expect = 9e-15
Identities = 68/258 (26%), Positives = 106/258 (41%), Gaps = 43/258 (16%)
Query: 463 CKAV-LPTGITVSVKKIEWGATRIKIVSEFITR----IGTVRHKNLIRLLGFCYNRHQAY 517
A TG V++K I+ +IK E I R + ++H N++RL + + Y
Sbjct: 16 YLARDKKTGKLVAIKVIK--KKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDEDKLY 73
Query: 518 LLYDYLPNGNLSEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNI 573
L+ +Y G+L + ++ + D A Y + + L +LH I H DLK NI
Sbjct: 74 LVMEYCEGGDLFDLLKKRGRLSEDEARFY--LRQILSALEYLHSKG---IVHRDLKPENI 128
Query: 574 VFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESG-EFYNA---MKEEMY---MDVYGF 626
+ DE+ LA+FG QL G T G Y A + + Y +D++
Sbjct: 129 LLDEDGHVKLADFGLA--RQLDPGEK----LTTFVGTPEYMAPEVLLGKGYGKAVDIWSL 182
Query: 627 GEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYN--ENEVGSSSSLQDEIK--LVLDVAL 682
G I+ E+LT G+ G + + E S +D I+ LV D
Sbjct: 183 GVILYELLT-GKPPFPGDDQLLELFKKIGKPKPPFPPPEWDISPEAKDLIRKLLVKD--- 238
Query: 683 LCTRSTPSDRPSMEEALK 700
P R + EEAL+
Sbjct: 239 ------PEKRLTAEEALQ 250
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 76.0 bits (187), Expect = 3e-14
Identities = 36/92 (39%), Positives = 52/92 (56%)
Query: 250 LDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPI 309
L + L G IP ++S L L+S+ L N + G +P +T+L+ LDLS N +G I
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 310 PESFADLKNLRLLSLMYNEMSGTVPESLVQLP 341
PES L +LR+L+L N +SG VP +L
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAALGGRL 514
|
Length = 623 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 75.6 bits (186), Expect = 4e-14
Identities = 42/134 (31%), Positives = 60/134 (44%), Gaps = 30/134 (22%)
Query: 65 WSGVKC----NKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVE 120
WSG C K + G+ L +GL G +P + L +NLS NS G P
Sbjct: 404 WSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISK--LRHLQSINLSGNSIRGNIPPS 461
Query: 121 IFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180
+ ++TSL LD+S N SF+GS+P + QL L++LNL
Sbjct: 462 LGSITSLEVLDLSYN------------------------SFNGSIPESLGQLTSLRILNL 497
Query: 181 AGSYFSGPIPSQFG 194
G+ SG +P+ G
Sbjct: 498 NGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 71.8 bits (176), Expect = 8e-14
Identities = 64/244 (26%), Positives = 104/244 (42%), Gaps = 36/244 (14%)
Query: 470 GITVSVKKIEWGATRIKIVSEFITR---IGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526
+TV+VK ++ ++ EF+ + ++H NL++LLG C Y++ +++ G
Sbjct: 31 SLTVAVKTLKEDTMEVE---EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG 87
Query: 527 NLSEKIR----TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 582
NL + +R + + + ++ + +L + H DL A N + EN
Sbjct: 88 NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF---IHRDLAARNCLVGENHLVK 144
Query: 583 LAEFGFKYL------TQLADGSFPAKIAWT--ESGEFYNAMKEEMYMDVYGFGEIILEIL 634
+A+FG L T A FP I WT ES + K + DV+ FG ++ EI
Sbjct: 145 VADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYN---KFSIKSDVWAFGVLLWEIA 199
Query: 635 TNGRLTNAGSSLQNKPIDGLLGEMYN-ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRP 693
T G G L + LL + Y E G V ++ C + PSDRP
Sbjct: 200 TYGMSPYPGIDLSQ--VYELLEKGYRMERPEGCPPK-------VYELMRACWQWNPSDRP 250
Query: 694 SMEE 697
S E
Sbjct: 251 SFAE 254
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 71.2 bits (174), Expect = 2e-13
Identities = 65/262 (24%), Positives = 116/262 (44%), Gaps = 46/262 (17%)
Query: 471 ITVSVKKIEWGATRIKIVSEFITRIGTV----RHKNLIRLLGFCYNRHQAYLLYDYLPNG 526
+TV+VK ++ AT K +S+ ++ + + +HKN+I LLG C Y++ +Y G
Sbjct: 48 VTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 106
Query: 527 NLSEKIRTKRDWAAKYKIVLG------------------VARGLCFL-HHDCYPAIPHGD 567
NL E +R +R +Y + VARG+ +L C H D
Sbjct: 107 NLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCI----HRD 162
Query: 568 LKASNIVFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWTESGEFYNAMKEEMY 620
L A N++ EN +A+FG Y + +G P K W ++ +
Sbjct: 163 LAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVK--WMAPEALFDRVYTHQ- 219
Query: 621 MDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 680
DV+ FG ++ EI T G GS P++ L + + + ++ +E+ +++
Sbjct: 220 SDVWSFGVLMWEIFTLG-----GSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD 274
Query: 681 ALLCTRSTPSDRPSMEEALKLL 702
C + PS RP+ ++ ++ L
Sbjct: 275 ---CWHAIPSHRPTFKQLVEDL 293
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 68.6 bits (168), Expect = 1e-12
Identities = 69/266 (25%), Positives = 109/266 (40%), Gaps = 54/266 (20%)
Query: 471 ITVSVKKIEWGATR---IKIVSEF--ITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525
TV+VK ++ AT +VSE + IG +HKN+I LLG C Y++ +Y +
Sbjct: 43 STVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGVCTQEGPLYVVVEYAAH 100
Query: 526 GNLSEKIRTKRDWAAKYKIVLG------------------VARGLCFLHHDCYPAIPHGD 567
GNL + +R +R VARG+ FL H D
Sbjct: 101 GNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRD 157
Query: 568 LKASNIVFDENMEPHLAEFGFK-------YLTQLADGSFPAKIAWTESGEFYNAMKEEMY 620
L A N++ E+ +A+FG Y + +G P K E A+ + +Y
Sbjct: 158 LAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPE------ALFDRVY 211
Query: 621 M---DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI-KL 676
DV+ FG ++ EI T G GS P++ L + + + E+ L
Sbjct: 212 THQSDVWSFGVLLWEIFTLG-----GSPYPGIPVEELFKLLKEGYRMEKPQNCTQELYHL 266
Query: 677 VLDVALLCTRSTPSDRPSMEEALKLL 702
+ D C PS RP+ ++ ++ L
Sbjct: 267 MRD----CWHEVPSQRPTFKQLVEDL 288
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 68.9 bits (168), Expect = 1e-12
Identities = 69/274 (25%), Positives = 118/274 (43%), Gaps = 47/274 (17%)
Query: 460 AAGCKAVLPTGIT-VSVKKIEWGATRIKIVSEFITRIGTVR----HKNLIRLLGFCYNRH 514
A G P +T V+VK ++ AT K +S+ I+ + ++ HKN+I LLG C
Sbjct: 39 AIGLDKEKPNRVTKVAVKMLKSDATE-KDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97
Query: 515 QAYLLYDYLPNGNLSEKIRTKRDWAAKY------------------KIVLGVARGLCFL- 555
Y++ +Y GNL E +R +R +Y VARG+ +L
Sbjct: 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA 157
Query: 556 HHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWTES 608
C H DL A N++ E+ +A+FG Y + +G P K W
Sbjct: 158 SKKCI----HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK--WMAP 211
Query: 609 GEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 668
++ + DV+ FG ++ EI T G GS P++ L + + + S
Sbjct: 212 EALFDRIYTHQ-SDVWSFGVLLWEIFTLG-----GSPYPGVPVEELFKLLKEGHRMDKPS 265
Query: 669 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLL 702
+ +E+ +++ C + PS RP+ ++ ++ L
Sbjct: 266 NCTNELYMMMRD---CWHAVPSQRPTFKQLVEDL 296
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 68.1 bits (166), Expect = 3e-12
Identities = 64/257 (24%), Positives = 110/257 (42%), Gaps = 46/257 (17%)
Query: 471 ITVSVKKIEWGATRIKIVSEFITRIGTVR----HKNLIRLLGFCYNRHQAYLLYDYLPNG 526
+TV+VK ++ AT K +S+ ++ + ++ HKN+I LLG C Y+L +Y G
Sbjct: 45 VTVAVKMLKDDATD-KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKG 103
Query: 527 NLSEKIRTKRDWAAKYKI------------------VLGVARGLCFL-HHDCYPAIPHGD 567
NL E +R +R Y VARG+ +L C H D
Sbjct: 104 NLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCI----HRD 159
Query: 568 LKASNIVFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWTESGEFYNAMKEEMY 620
L A N++ E+ +A+FG Y + +G P K W ++ +
Sbjct: 160 LAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVK--WMAPEALFDRVYTHQ- 216
Query: 621 MDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 680
DV+ FG ++ EI T G GS P++ L + + + ++ E+ +++
Sbjct: 217 SDVWSFGVLLWEIFTLG-----GSPYPGIPVEELFKLLKEGHRMDKPANCTHELYMIMRE 271
Query: 681 ALLCTRSTPSDRPSMEE 697
C + PS RP+ ++
Sbjct: 272 ---CWHAVPSQRPTFKQ 285
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 63.4 bits (154), Expect = 5e-11
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 15/176 (8%)
Query: 473 VSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKI 532
V++K I GA + E + + H L++L G C R L+++++ +G LS+ +
Sbjct: 31 VAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYL 90
Query: 533 RTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK 589
R +R ++ ++ L V G+ +L + H DL A N + EN +++FG
Sbjct: 91 RAQRGKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMT 147
Query: 590 YL------TQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRL 639
T FP K W+ S E ++ K DV+ FG ++ E+ + G+
Sbjct: 148 RFVLDDQYTSSTGTKFPVK--WS-SPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKT 200
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 65.2 bits (159), Expect = 6e-11
Identities = 32/80 (40%), Positives = 45/80 (56%)
Query: 163 GSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKT 222
G +P +IS+L HL+ +NL+G+ G IP GS SLE L L+ N N IP LG L +
Sbjct: 432 GFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTS 491
Query: 223 VTHMEIGYNFYQGNIPWQLG 242
+ + + N G +P LG
Sbjct: 492 LRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 63.8 bits (155), Expect = 6e-11
Identities = 66/265 (24%), Positives = 116/265 (43%), Gaps = 52/265 (19%)
Query: 471 ITVSVKKIEWGATRIKIVSEFITRIGTV----RHKNLIRLLGFCYNRHQAYLLYDYLPNG 526
+TV+VK ++ AT K +++ I+ + + +HKN+I LLG C Y++ +Y G
Sbjct: 45 VTVAVKMLKDNATD-KDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKG 103
Query: 527 NLSEKIRTKRDWAAKYKI------------------VLGVARGLCFLH-HDCYPAIPHGD 567
NL E +R +R Y VARG+ +L C H D
Sbjct: 104 NLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCI----HRD 159
Query: 568 LKASNIVFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWTESGEFYNAMKEEMY 620
L A N++ E+ +A+FG Y + ++G P K E A+ + +Y
Sbjct: 160 LAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPE------ALFDRVY 213
Query: 621 M---DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677
DV+ FG ++ EI T G GS P++ L + + + S+ E+ ++
Sbjct: 214 THQSDVWSFGILMWEIFTLG-----GSPYPGIPVEELFKLLREGHRMDKPSNCTHELYML 268
Query: 678 LDVALLCTRSTPSDRPSMEEALKLL 702
+ C + P+ RP+ ++ ++ L
Sbjct: 269 MRE---CWHAVPTQRPTFKQLVEAL 290
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 61.6 bits (150), Expect = 2e-10
Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 32/219 (14%)
Query: 497 TVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLG----VARGL 552
T+RH NL++LLG + Y++ +Y+ G+L + +R++ LG V G+
Sbjct: 56 TLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGM 115
Query: 553 CFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF-KYLTQ-LADGSFPAKIAWT---- 606
+L H DL A N++ E++ +++FG K +Q G P K WT
Sbjct: 116 EYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVK--WTAPEA 170
Query: 607 -ESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 665
+F DV+ FG ++ EI + GR+ L+ ++ E G
Sbjct: 171 LREKKFSTK------SDVWSFGILLWEIYSFGRVPYPRIPLK---------DVVPHVEKG 215
Query: 666 SSSSLQDEI-KLVLDVALLCTRSTPSDRPSMEEALKLLS 703
+ V V C P+ RP+ ++ + L+
Sbjct: 216 YRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLA 254
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 60.4 bits (146), Expect = 8e-10
Identities = 63/237 (26%), Positives = 94/237 (39%), Gaps = 48/237 (20%)
Query: 490 EFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLG-- 547
E + ++G H N+I LLG C +R YL +Y P+GNL + +R R +
Sbjct: 59 EVLCKLG--HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS 116
Query: 548 ----------------VARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF--- 588
VARG+ +L + H DL A NI+ EN +A+FG
Sbjct: 117 TASTLSSQQLLHFAADVARGMDYLSQKQFI---HRDLAARNILVGENYVAKIADFGLSRG 173
Query: 589 -KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ 647
+ + G P + ES N DV+ +G ++ EI+ SL
Sbjct: 174 QEVYVKKTMGRLPVRWMAIES---LNYSVYTTNSDVWSYGVLLWEIV----------SLG 220
Query: 648 NKPIDGLL-GEMYNENEVG----SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEAL 699
P G+ E+Y + G + DE V D+ C R P +RPS + L
Sbjct: 221 GTPYCGMTCAELYEKLPQGYRLEKPLNCDDE---VYDLMRQCWREKPYERPSFAQIL 274
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 2e-09
Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 12/127 (9%)
Query: 284 QVPWE-----FSRVTT---LKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPE 335
Q PW F + L L + L G IP + L++L+ ++L N + G +P
Sbjct: 401 QHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPP 460
Query: 336 SLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLI 395
SL + SLE+L + N F+GS+PE+LG+ + LR ++++ N+ +G +P + GG L
Sbjct: 461 SLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAAL--GGRLLHRA 518
Query: 396 LFSNNFT 402
F NFT
Sbjct: 519 SF--NFT 523
|
Length = 623 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 58.9 bits (142), Expect = 2e-09
Identities = 54/240 (22%), Positives = 108/240 (45%), Gaps = 36/240 (15%)
Query: 473 VSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKI 532
V+VK ++ G ++ E + T++H L+RL Y++ +Y+ G+L + +
Sbjct: 33 VAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFL 92
Query: 533 RTKR----------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 582
++ D++A+ +A G+ ++ Y H DL+A+N++ E++
Sbjct: 93 KSDEGGKVLLPKLIDFSAQ------IAEGMAYIERKNY---IHRDLRAANVLVSESLMCK 143
Query: 583 LAEFGFKYLTQLADGSFPAK------IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTN 636
+A+FG + + D + A+ I WT + E N + DV+ FG ++ EI+T
Sbjct: 144 IADFGLARVIE--DNEYTAREGAKFPIKWT-APEAINFGSFTIKSDVWSFGILLYEIVTY 200
Query: 637 GRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSME 696
G++ G S N + L Y + + DE+ D+ C + +RP+ +
Sbjct: 201 GKIPYPGMS--NSDVMSALQRGYRMPRM---ENCPDEL---YDIMKTCWKEKAEERPTFD 252
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 59.4 bits (142), Expect = 3e-09
Identities = 42/223 (18%), Positives = 74/223 (33%), Gaps = 27/223 (12%)
Query: 500 HKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKY-----KIVLGVARGLCF 554
N+++L F + YL+ +Y+ G+L + ++ I+ + L +
Sbjct: 57 PPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEY 116
Query: 555 LHHDCYPAIPHGDLKASNIVFDEN-MEPHLAEFGFKYLTQLADGSFPAKIAWT------- 606
LH I H D+K NI+ D + L +FG L + +
Sbjct: 117 LHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPG 173
Query: 607 ----ESGEFYNAMKEEMYMDVYGFGEIILEILTN-----GRLTNAGSSLQNKPIDGLLGE 657
E + D++ G + E+LT G ++ +S K I L
Sbjct: 174 YMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP 233
Query: 658 MYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700
S S+ + K D+ P +R S L
Sbjct: 234 SLASPL--SPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS 274
|
Length = 384 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 59.4 bits (144), Expect = 4e-09
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 209 LNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNL 268
L IP ++ L+ + + + N +GNIP LG+++ ++ LD++ + +GSIP+ L L
Sbjct: 430 LRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQL 489
Query: 269 TKLESLFLFRNQLAGQVP 286
T L L L N L+G+VP
Sbjct: 490 TSLRILNLNGNSLSGRVP 507
|
Length = 623 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 57.3 bits (138), Expect = 5e-09
Identities = 53/240 (22%), Positives = 112/240 (46%), Gaps = 37/240 (15%)
Query: 473 VSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKI 532
V+VK ++ G+ ++ + T++H L++L + Y++ +++ G+L + +
Sbjct: 33 VAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFL 91
Query: 533 RTKR----------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 582
++ D++A+ +A G+ F+ Y H DL+A+NI+ ++
Sbjct: 92 KSDEGSKQPLPKLIDFSAQ------IAEGMAFIEQRNYI---HRDLRAANILVSASLVCK 142
Query: 583 LAEFGFKYLTQLADGSFPAK------IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTN 636
+A+FG + + D + A+ I WT + E N + DV+ FG +++EI+T
Sbjct: 143 IADFGLARVIE--DNEYTAREGAKFPIKWT-APEAINFGSFTIKSDVWSFGILLMEIVTY 199
Query: 637 GRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSME 696
GR+ G S N + L Y + + +E+ ++ + C ++ P +RP+ E
Sbjct: 200 GRIPYPGMS--NPEVIRALERGY---RMPRPENCPEEL---YNIMMRCWKNRPEERPTFE 251
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 56.1 bits (135), Expect = 1e-08
Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 20/179 (11%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRIGT-VRHKNLIRLLGFCYNRHQA-YLLYDYLPNG 526
TG V+VK I+ T + E T + T + HKNL+RLLG H Y++ + + G
Sbjct: 28 TGQKVAVKNIKCDVTAQAFLEE--TAVMTKLHHKNLVRLLGVIL--HNGLYIVMELMSKG 83
Query: 527 NLSEKIRTKRDWAAK----YKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 582
NL +RT+ + L VA G+ +L + H DL A NI+ E+
Sbjct: 84 NLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAK 140
Query: 583 LAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM---DVYGFGEIILEILTNGR 638
+++FG + + + + WT A+K + + DV+ +G ++ E+ + GR
Sbjct: 141 VSDFGLARVGSMGVDNSKLPVKWTAP----EALKHKKFSSKSDVWSYGVLLWEVFSYGR 195
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 56.5 bits (136), Expect = 1e-08
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 471 ITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527
+ V++K ++ G T R +SE + +G H N+IRL G A ++ +Y+ NG
Sbjct: 34 VAVAIKTLKPGYTEKQRQDFLSE-ASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGA 92
Query: 528 LSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 584
L + +R + Y++V G+A G+ +L Y H DL A NI+ + N+E ++
Sbjct: 93 LDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNY---VHRDLAARNILVNSNLECKVS 149
Query: 585 EFGF-KYLTQLADGSFPAK-----IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNG 637
+FG + L +G++ I WT + E K DV+ FG ++ E+++ G
Sbjct: 150 DFGLSRVLEDDPEGTYTTSGGKIPIRWT-APEAIAYRKFTSASDVWSFGIVMWEVMSFG 207
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 2e-08
Identities = 26/79 (32%), Positives = 48/79 (60%)
Query: 234 QGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVT 293
+G IP + + +Q ++++G ++ G+IP L ++T LE L L N G +P ++T
Sbjct: 431 RGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLT 490
Query: 294 TLKSLDLSDNRLSGPIPES 312
+L+ L+L+ N LSG +P +
Sbjct: 491 SLRILNLNGNSLSGRVPAA 509
|
Length = 623 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 56.8 bits (137), Expect = 3e-08
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 6/118 (5%)
Query: 289 FSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLP-SLEILF 347
SRV S+DLS +SG I + L ++ ++L N++SG +P+ + SL L
Sbjct: 68 SSRVV---SIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLN 124
Query: 348 IWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIV 405
+ NN F+GS+P G L +D+S N +G IP DI S L L L N G +
Sbjct: 125 LSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKI 180
|
Length = 968 |
| >gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Score = 55.3 bits (133), Expect = 3e-08
Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 19/192 (9%)
Query: 471 ITVSVKKIE--WGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528
I V++K I+ G + +++ + +G++ H ++RLLG C L+ P G+L
Sbjct: 37 IPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGA-SLQLVTQLSPLGSL 95
Query: 529 SEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 585
+ +R RD +++ + +A+G+ +L + H +L A NI+ + +A+
Sbjct: 96 LDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIAD 152
Query: 586 FGFKYLTQLADGSF-------PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGR 638
FG L D + P K ES F + DV+ +G + E+++ G
Sbjct: 153 FGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQS---DVWSYGVTVWEMMSYGA 209
Query: 639 LTNAGSSLQNKP 650
AG P
Sbjct: 210 EPYAGMRPHEVP 221
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 55.7 bits (134), Expect = 4e-08
Identities = 67/236 (28%), Positives = 112/236 (47%), Gaps = 22/236 (9%)
Query: 96 LRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFS------GHFPGGIQSLR 149
L + +DLNL+ + E+ LT+L SLD+ NN + G
Sbjct: 90 LNLLPLPSLDLNLNRLRSN---ISELLELTNLTSLDLDNNNITDIPPLIGLLK------S 140
Query: 150 NLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLL 209
NL LD N S+P+ + L +LK L+L+ + S +P + +L L L+GN +
Sbjct: 141 NLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLSD-LPKLLSNLSNLNNLDLSGNKI 198
Query: 210 NDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLT 269
+D +P E+ +L + +++ N + L N+ + L+++ N +P+ + NL+
Sbjct: 199 SD-LPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSN-NKLEDLPESIGNLS 255
Query: 270 KLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLM 325
LE+L L NQ++ + S T L+ LDLS N LS +P L L LL +
Sbjct: 256 NLETLDLSNNQIS-SISSLGSL-TNLRELDLSGNSLSNALPLIALLLLLLELLLNL 309
|
Length = 394 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 5e-08
Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 20/180 (11%)
Query: 470 GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA-YLLYDYLPNGNL 528
G V+VK I+ AT ++E + + +RH NL++LLG Y++ +Y+ G+L
Sbjct: 29 GNKVAVKCIKNDATAQAFLAE-ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 87
Query: 529 SEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 584
+ +R++ K L V + +L + + H DL A N++ E+ ++
Sbjct: 88 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNF---VHRDLAARNVLVSEDNVAKVS 144
Query: 585 EFGF-KYLTQLAD-GSFPAKIAWTESGEFYNAMKEEMY---MDVYGFGEIILEILTNGRL 639
+FG K + D G P K WT A++E+ + DV+ FG ++ EI + GR+
Sbjct: 145 DFGLTKEASSTQDTGKLPVK--WTAP----EALREKKFSTKSDVWSFGILLWEIYSFGRV 198
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 54.5 bits (131), Expect = 5e-08
Identities = 61/252 (24%), Positives = 106/252 (42%), Gaps = 61/252 (24%)
Query: 473 VSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKI 532
V++K ++ G+ + + ++H L+RL + Y++ +Y+ NG+L + +
Sbjct: 33 VAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYMENGSLVDFL 91
Query: 533 RTKR----------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 582
+T D AA+ +A G+ F+ Y H DL+A+NI+ E +
Sbjct: 92 KTPEGIKLTINKLIDMAAQ------IAEGMAFIERKNYI---HRDLRAANILVSETLCCK 142
Query: 583 LAEFGFKYL------TQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTN 636
+A+FG L T FP I WT + E N + DV+ FG ++ EI+T
Sbjct: 143 IADFGLARLIEDNEYTAREGAKFP--IKWT-APEAINYGTFTIKSDVWSFGILLTEIVTY 199
Query: 637 GRLTNAGSS----LQN--------KPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 684
GR+ G + +QN +P D E+Y ++ LC
Sbjct: 200 GRIPYPGMTNPEVIQNLERGYRMPRP-DNCPEELY-------------------ELMRLC 239
Query: 685 TRSTPSDRPSME 696
+ P +RP+ E
Sbjct: 240 WKEKPEERPTFE 251
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 54.1 bits (130), Expect = 6e-08
Identities = 57/250 (22%), Positives = 104/250 (41%), Gaps = 39/250 (15%)
Query: 471 ITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSE 530
I V++K I GA + E + + H L++L G C + Y++ +++ NG L
Sbjct: 29 IKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLN 88
Query: 531 KIRTKRDWAAKYKIVLGVARGLC----FLHHDCYPAIPHGDLKASNIVFDENMEPHLAEF 586
+R ++ +K ++L + + +C +L + + H DL A N + +++F
Sbjct: 89 YLRQRQGKLSK-DMLLSMCQDVCEGMEYLERNSF---IHRDLAARNCLVSSTGVVKVSDF 144
Query: 587 GF-KYL-----TQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLT 640
G +Y+ T + FP K W+ E +N K DV+ FG ++ E+ T G++
Sbjct: 145 GMTRYVLDDEYTSSSGAKFPVK--WS-PPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKM- 200
Query: 641 NAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI-------KLVLDVALLCTRSTPSDRP 693
P E + EV S + V +V C P RP
Sbjct: 201 ---------PF-----EKKSNYEVVEMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRP 246
Query: 694 SMEEALKLLS 703
+ E L+ ++
Sbjct: 247 TFAELLRAIT 256
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 53.8 bits (129), Expect = 7e-08
Identities = 68/260 (26%), Positives = 104/260 (40%), Gaps = 44/260 (16%)
Query: 457 PQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRI-GTVRHKNLIRLLGFCYNRHQ 515
P + CK LP + +IK +SE RI H N+++L+G C R
Sbjct: 21 PVAVKTCKEDLPQEL------------KIKFLSE--ARILKQYDHPNIVKLIGVCTQRQP 66
Query: 516 AYLLYDYLPNGNLSEKIRTKRDWAAKYKIV---LGVARGLCFLH-HDCYPAIPHGDLKAS 571
Y++ + +P G+ +R K+D ++V L A G+ +L +C H DL A
Sbjct: 67 IYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCI----HRDLAAR 122
Query: 572 NIVFDENMEPHLAEFGFKYLTQLADGSFPAK------IAWTESGEFYNAMKEEMYMDVYG 625
N + EN +++FG Q DG + + I WT + E N + DV+
Sbjct: 123 NCLVGENNVLKISDFGMS--RQEDDGIYSSSGLKQIPIKWT-APEALNYGRYSSESDVWS 179
Query: 626 FGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN-EVG-SSSSLQDEIKLVLDVALL 683
+G ++ E SL P G+ + E E G S Q V V
Sbjct: 180 YGILLWETF----------SLGVCPYPGMTNQQAREQVEKGYRMSCPQKCPDDVYKVMQR 229
Query: 684 CTRSTPSDRPSMEEALKLLS 703
C P +RP E K L+
Sbjct: 230 CWDYKPENRPKFSELQKELA 249
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 49.1 bits (118), Expect = 7e-08
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 295 LKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYF 353
LKSLDLS+NRL+ +F L NL++L L N ++ PE+ LPSL L + N
Sbjct: 2 LKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Score = 54.3 bits (130), Expect = 8e-08
Identities = 70/247 (28%), Positives = 107/247 (43%), Gaps = 34/247 (13%)
Query: 469 TGITVSVKKIEWGATRIK-----IVSE--FITRIGTVRHKNLIRLLGFCYNR-HQAYLLY 520
T V++KK+ + + I+ E F+ RI +H N I G CY R H A+L+
Sbjct: 49 TNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRI---KHPNSIEYKG-CYLREHTAWLVM 104
Query: 521 DYLPNGNLSEKIRTKRDWAAKYKIVL---GVARGLCFLHHDCYPAIPHGDLKASNIVFDE 577
+Y G+ S+ + + + +I G +GL +LH + H D+KA NI+ E
Sbjct: 105 EYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTE 160
Query: 578 NMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMY---MDVYGFGEIILEIL 634
+ LA+FG + A+ SF W + E AM E Y +DV+ G +E
Sbjct: 161 PGQVKLADFGSASIASPAN-SFVGTPYWM-APEVILAMDEGQYDGKVDVWSLGITCIE-- 216
Query: 635 TNGRLTNAGSSLQN-KPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRP 693
L L N + L NE+ S+ D + +D C + P DRP
Sbjct: 217 ----LAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDS---CLQKIPQDRP 269
Query: 694 SMEEALK 700
+ EE LK
Sbjct: 270 TSEELLK 276
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 8e-08
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 24/209 (11%)
Query: 498 VRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLG----VARGLC 553
+RH LI+L C Y++ + + G+L E ++ A K ++ VA G+
Sbjct: 58 LRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMA 117
Query: 554 FLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL------TQLADGSFPAKIAWTE 607
+L Y H DL A N++ EN +A+FG + FP K WT
Sbjct: 118 YLEAQNYI---HRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIK--WT- 171
Query: 608 SGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSS 667
+ E + + DV+ FG ++ EI+T GR+ G + N + + + Y +
Sbjct: 172 APEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPG--MTNAEVLQQVDQGY---RMPCP 226
Query: 668 SSLQDEIKLVLDVALLCTRSTPSDRPSME 696
E+ D+ L C + P DRP+ E
Sbjct: 227 PGCPKEL---YDIMLDCWKEDPDDRPTFE 252
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 9e-08
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 28/158 (17%)
Query: 497 TVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKR----------DWAAKYKIVL 546
+RH L++L C Y++ +Y+ G+L + +++ D AA+
Sbjct: 57 KLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQ----- 111
Query: 547 GVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK---- 602
+A G+ +L Y H DL A NI+ EN+ +A+FG L + D + A+
Sbjct: 112 -IAEGMAYLESRNY---IHRDLAARNILVGENLVCKIADFGLARL--IEDDEYTAREGAK 165
Query: 603 --IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGR 638
I WT + E N + + DV+ FG ++ EI+T GR
Sbjct: 166 FPIKWT-APEAANYGRFTIKSDVWSFGILLTEIVTYGR 202
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 53.1 bits (127), Expect = 1e-07
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 43/218 (19%)
Query: 498 VRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKR----------DWAAKYKIVLG 547
+RH+ L++L + Y++ +Y+ G+L + ++ + D AA+
Sbjct: 58 LRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ------ 110
Query: 548 VARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK----- 602
+A G+ ++ Y H DL+A+NI+ EN+ +A+FG L + D + A+
Sbjct: 111 IASGMAYVERMNYV---HRDLRAANILVGENLVCKVADFGLARLIE--DNEYTARQGAKF 165
Query: 603 -IAWTE-SGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLG-EMY 659
I WT Y + + DV+ FG ++ E+ T GR+ P G++ E+
Sbjct: 166 PIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRV----------PYPGMVNREVL 213
Query: 660 NENEVGSSSSLQDEIKLVL-DVALLCTRSTPSDRPSME 696
++ E G E L D+ C R P +RP+ E
Sbjct: 214 DQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFE 251
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 53.2 bits (127), Expect = 1e-07
Identities = 64/240 (26%), Positives = 96/240 (40%), Gaps = 49/240 (20%)
Query: 490 EFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKR------DWAAKY- 542
E + ++G H N+I LLG C +R YL +Y P+GNL + +R R +A
Sbjct: 47 EVLCKLG--HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS 104
Query: 543 -----------KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF--- 588
VARG+ +L + H DL A NI+ EN +A+FG
Sbjct: 105 TASTLSSQQLLHFAADVARGMDYLSQKQFI---HRDLAARNILVGENYVAKIADFGLSRG 161
Query: 589 -KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ 647
+ + G P + ES N DV+ +G ++ EI+ SL
Sbjct: 162 QEVYVKKTMGRLPVRWMAIES---LNYSVYTTNSDVWSYGVLLWEIV----------SLG 208
Query: 648 NKPIDGLL-GEMYNENEVG----SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEE-ALKL 701
P G+ E+Y + G + DE V D+ C R P +RPS + + L
Sbjct: 209 GTPYCGMTCAELYEKLPQGYRLEKPLNCDDE---VYDLMRQCWREKPYERPSFAQILVSL 265
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 2e-07
Identities = 56/232 (24%), Positives = 94/232 (40%), Gaps = 38/232 (16%)
Query: 485 IKIVS--------EFITRIGT---VRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIR 533
IKI+ +F + +RHK+LI L C Y++ + + G+L +R
Sbjct: 35 IKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLR 94
Query: 534 TKRDWAAKYKIVLG----VARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK 589
+ ++ VA G+ +L H DL A NI+ E++ +A+FG
Sbjct: 95 SPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLA 151
Query: 590 -------YLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNA 642
YL+ D P K WT + E + DV+ FG ++ E+ T G++
Sbjct: 152 RLIKEDVYLSS--DKKIPYK--WT-APEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYP 206
Query: 643 GSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPS 694
G + N + + Y + + EI ++ L C + P DRPS
Sbjct: 207 GMN--NHEVYDQITAGY---RMPCPAKCPQEIYKIM---LECWAAEPEDRPS 250
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 2e-07
Identities = 61/254 (24%), Positives = 105/254 (41%), Gaps = 35/254 (13%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRIGTVR---HKNLIRLLGFCYNRHQAYLL--YDYL 523
TG V+VK + + + S+F I +R H+N+++ G C L +YL
Sbjct: 32 TGEQVAVKSLN-HSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYL 90
Query: 524 PNGNLSEKIRTKRDWAAKYKIVL---GVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580
P+G+L + ++ RD +++L + +G+ +L Y H DL A NI+ +
Sbjct: 91 PSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYI---HRDLAARNILVESEDL 147
Query: 581 PHLAEFGF--------KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILE 632
+++FG Y G P I W + E K DV+ FG + E
Sbjct: 148 VKISDFGLAKVLPEDKDYYYVKEPGESP--IFWY-APECLRTSKFSSASDVWSFGVTLYE 204
Query: 633 ILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL---------VLDVALL 683
+ T G + + + + I G+M + L++ +L V D+ L
Sbjct: 205 LFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL---ELLKEGERLPRPPSCPDEVYDLMKL 261
Query: 684 CTRSTPSDRPSMEE 697
C + P DRPS +
Sbjct: 262 CWEAEPQDRPSFAD 275
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 2e-07
Identities = 60/235 (25%), Positives = 95/235 (40%), Gaps = 48/235 (20%)
Query: 490 EFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKR------DWAAKY- 542
E + ++G H N+I LLG C NR Y+ +Y P GNL + +R R +A ++
Sbjct: 54 EVLCKLG--HHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHG 111
Query: 543 -----------KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF--- 588
+ VA G+ +L + H DL A N++ EN+ +A+FG
Sbjct: 112 TASTLTSQQLLQFASDVATGMQYLSEKQF---IHRDLAARNVLVGENLASKIADFGLSRG 168
Query: 589 -KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ 647
+ + G P + ES N DV+ FG ++ EI+ SL
Sbjct: 169 EEVYVKKTMGRLPVRWMAIES---LNYSVYTTKSDVWSFGVLLWEIV----------SLG 215
Query: 648 NKPIDGLL-GEMYNENEVG----SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEE 697
P G+ E+Y + G + DE V ++ C R P +RP +
Sbjct: 216 GTPYCGMTCAELYEKLPQGYRMEKPRNCDDE---VYELMRQCWRDRPYERPPFAQ 267
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 52.0 bits (125), Expect = 3e-07
Identities = 44/178 (24%), Positives = 86/178 (48%), Gaps = 16/178 (8%)
Query: 471 ITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527
I V++K ++ G++ R+ ++E + +G H N+IRL G ++ +Y+ NG+
Sbjct: 33 IDVAIKTLKAGSSDKQRLDFLTE-ASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGS 91
Query: 528 LSEKIRTKRD---WAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 584
L + +R ++ G+A G+ +L Y H DL A NI+ + N+ ++
Sbjct: 92 LDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYV---HRDLAARNILVNSNLVCKVS 148
Query: 585 EFGFKYLTQLADGSFPAK-----IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNG 637
+FG + ++ ++ K I WT + E K DV+ FG ++ E+++ G
Sbjct: 149 DFGLSRRLEDSEATYTTKGGKIPIRWT-APEAIAYRKFTSASDVWSFGIVMWEVMSYG 205
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 4e-07
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 16/185 (8%)
Query: 464 KAVLPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 520
K VL V+VK + K + E + H N+++L+G C + Y++
Sbjct: 13 KGVLKGNTEVAVKTCRSTLPPDLKRKFLQE-AEILKQYDHPNIVKLIGVCVQKQPIYIVM 71
Query: 521 DYLPNGNLSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 577
+ +P G+L +R K++ K++ L A G+ +L I H DL A N + E
Sbjct: 72 ELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKN--CI-HRDLAARNCLVGE 128
Query: 578 NMEPHLAEFGFK-----YLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILE 632
N +++FG + ++DG I WT + E N + DV+ +G ++ E
Sbjct: 129 NNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWT-APEALNYGRYTSESDVWSYGILLWE 187
Query: 633 ILTNG 637
+ G
Sbjct: 188 TFSLG 192
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Score = 52.1 bits (125), Expect = 4e-07
Identities = 75/258 (29%), Positives = 108/258 (41%), Gaps = 54/258 (20%)
Query: 469 TGITVSVKKIEWGATRIK-----IVSEFITRIGTVRHKNLIRLLGFCYNR-HQAYLLYDY 522
T V++KK+ + + I+ E + + +RH N I G CY R H A+L+ +Y
Sbjct: 39 TNEVVAIKKMSYSGKQSNEKWQDIIKE-VRFLQQLRHPNTIEYKG-CYLREHTAWLVMEY 96
Query: 523 LPNGNLSEKIRTKR------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD 576
G+ S+ + + + AA I G +GL +LH H D+KA NI+
Sbjct: 97 CL-GSASDILEVHKKPLQEVEIAA---ICHGALQGLAYLHSHE---RIHRDIKAGNILLT 149
Query: 577 ENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMY---MDVYGFGEIILEI 633
E LA+FG L A+ SF W + E AM E Y +DV+ G +E+
Sbjct: 150 EPGTVKLADFGSASLVSPAN-SFVGTPYWM-APEVILAMDEGQYDGKVDVWSLGITCIEL 207
Query: 634 ------LTNGRLTNAGSSL----QNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 683
L N NA S+L QN SS+ D + +D
Sbjct: 208 AERKPPLFN---MNAMSALYHIAQNDS------------PTLSSNDWSDYFRNFVD---S 249
Query: 684 CTRSTPSDRPSMEEALKL 701
C + P DRPS EE LK
Sbjct: 250 CLQKIPQDRPSSEELLKH 267
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 52.3 bits (125), Expect = 5e-07
Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 11/228 (4%)
Query: 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS 160
+ L +L+LS N P + NL +L +LD+S N+ S P + +L NL LD N
Sbjct: 140 SNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNK 197
Query: 161 FSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGML 220
S +P EI L L+ L+L+ + + S + K+L L L+ N L D +P +G L
Sbjct: 198 IS-DLPPEIELLSALEELDLSNN-SIIELLSSLSNLKNLSGLELSNNKLED-LPESIGNL 254
Query: 221 KTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQ 280
+ +++ N Q + LG+++ ++ LD++G +LS ++P L LE L
Sbjct: 255 SNLETLDLSNN--QISSISSLGSLTNLRELDLSGNSLSNALPLIALLLLLLELLLNLLLT 312
Query: 281 LAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNE 328
L E + L + ++ N + PE+ + L++L L + N
Sbjct: 313 LK---ALELKLNSILLNNNILSNGETS-SPEALSILESLNNLWTLDNA 356
|
Length = 394 |
| >gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Score = 51.6 bits (123), Expect = 6e-07
Identities = 61/244 (25%), Positives = 102/244 (41%), Gaps = 28/244 (11%)
Query: 469 TGITVSVKKIEWGATRIK-----IVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 523
T V+VKK+ + + I+ E + + ++H N I G H A+L+ +Y
Sbjct: 45 TNEVVAVKKMSYSGKQTNEKWQDIIKE-VKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYC 103
Query: 524 PNGNLSEKIRTKRDWAAKYKIVL---GVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580
G+ S+ + + + +I G +GL +LH + H D+KA NI+ E +
Sbjct: 104 L-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQ 159
Query: 581 PHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMY---MDVYGFGEIILEILTNG 637
LA+FG + A+ SF W + E AM E Y +DV+ G +E
Sbjct: 160 VKLADFGSASKSSPAN-SFVGTPYWM-APEVILAMDEGQYDGKVDVWSLGITCIE----- 212
Query: 638 RLTNAGSSLQN-KPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSME 696
L L N + L N++ S+ D + +D C + P +RP+
Sbjct: 213 -LAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVD---YCLQKIPQERPASA 268
Query: 697 EALK 700
E L+
Sbjct: 269 ELLR 272
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 1e-06
Identities = 41/180 (22%), Positives = 77/180 (42%), Gaps = 20/180 (11%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITR----IGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524
TG V++KK + + + V + R + +RH+N++ L + + YL+++Y+
Sbjct: 25 TGEIVAIKKFK-ESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVE 83
Query: 525 NGNLS--EKIRTKRDWAAKYKIVLGVARGLCFLH-HDCYPAIPHGDLKASNIVFDENMEP 581
L E A + + + + + H H+ I H D+K NI+ E+
Sbjct: 84 RTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHN----IIHRDIKPENILVSESGVL 139
Query: 582 HLAEFGF-KYLTQLADGSFPAKIA--WTESGEFYNAMKEEMY---MDVYGFGEIILEILT 635
L +FGF + L +A W + E + + Y +DV+ G I+ E+L
Sbjct: 140 KLCDFGFARALRARPASPLTDYVATRWYRAPELL--VGDTNYGKPVDVWAIGCIMAELLD 197
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 3e-06
Identities = 66/264 (25%), Positives = 111/264 (42%), Gaps = 62/264 (23%)
Query: 475 VKKIEWGATR-IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL---------- 523
VKKI A R I+++ + RH+NL+ L+ + + YL+++++
Sbjct: 43 VKKI---AMREIRMLKQL-------RHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEK 92
Query: 524 -PNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 582
PNG ++R K + + RG+ F H I H D+K NI+ ++
Sbjct: 93 YPNGLDESRVR---------KYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVK 140
Query: 583 LAEFGFKYLTQLADGSFPAKIA--WTESGEFYNAMKEEMY---MDVYGFGEIILEILTNG 637
L +FGF + +A W + E + + Y +D++ G ++ E+LT
Sbjct: 141 LCDFGFARTLAAPGEVYTDYVATRWYRAPELL--VGDTKYGRAVDIWAVGCLVTEMLTGE 198
Query: 638 RLTNAGSSL-QNKPIDGLLG-------EMYNENEVGSSSSLQD--EIK-----------L 676
L S + Q I LG E++ +N + + L + EI+ L
Sbjct: 199 PLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGL 258
Query: 677 VLDVALLCTRSTPSDRPSMEEALK 700
VLD+A C R P DRPS + L
Sbjct: 259 VLDLAKQCLRIDPDDRPSSSQLLH 282
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 3e-06
Identities = 35/150 (23%), Positives = 70/150 (46%), Gaps = 17/150 (11%)
Query: 500 HKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLC----FL 555
H NL++L G C + +++ +Y+ NG L +R ++ + +L + +C +L
Sbjct: 58 HPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGT-EWLLDMCSDVCEAMEYL 116
Query: 556 HHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF-KYL-----TQLADGSFPAKIAWTESG 609
+ + H DL A N + E+ +++FG +Y+ T FP K W
Sbjct: 117 ESNGF---IHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVK--WA-PP 170
Query: 610 EFYNAMKEEMYMDVYGFGEIILEILTNGRL 639
E ++ + DV+ FG ++ E+ + G++
Sbjct: 171 EVFDYSRFSSKSDVWSFGVLMWEVFSEGKM 200
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 4e-06
Identities = 57/260 (21%), Positives = 108/260 (41%), Gaps = 44/260 (16%)
Query: 473 VSVKKIEWGATRIKIVSEFIT---RIGTVRHKNLIRLLGFCYNRHQA------YLLYDYL 523
V+VK ++ + EF++ + H N+++L+G C+ ++ ++
Sbjct: 30 VAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFM 89
Query: 524 PNGNL-SEKIRTKRDWAAKY-------KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 575
+G+L S + ++ + K ++ +A G+ +L + + H DL A N +
Sbjct: 90 KHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFI---HRDLAARNCML 146
Query: 576 DENMEPHLAEFGFK-------YLTQLADGSFPAKIAWTESGEFYNAMKEEMYM---DVYG 625
E+M +A+FG Y Q P K ES + + +Y DV+
Sbjct: 147 REDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIES------LADRVYTSKSDVWA 200
Query: 626 FGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCT 685
FG + EI T G+ G ++N I L + N + DE + D+ C
Sbjct: 201 FGVTMWEIATRGQTPYPG--VENHEIYDYL---RHGNRLKQPEDCLDE---LYDLMYSCW 252
Query: 686 RSTPSDRPSMEEALKLLSGL 705
R+ P DRP+ + ++L +
Sbjct: 253 RADPKDRPTFTKLREVLENI 272
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 6e-06
Identities = 54/236 (22%), Positives = 105/236 (44%), Gaps = 29/236 (12%)
Query: 473 VSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKI 532
V+VK ++ G + E + +RH L++L + Y++ +Y+ G+L + +
Sbjct: 33 VAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFL 91
Query: 533 RTKRDWAAKY----KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 588
+ A K + VA G+ ++ Y H DL+++NI+ + + +A+FG
Sbjct: 92 KDGEGRALKLPNLVDMAAQVAAGMAYIERMNYI---HRDLRSANILVGDGLVCKIADFGL 148
Query: 589 KYLTQLADGSFPAK------IAWTE-SGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTN 641
L + D + A+ I WT Y + + DV+ FG ++ E++T GR+
Sbjct: 149 ARLIE--DNEYTARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELVTKGRVPY 204
Query: 642 AGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL-DVALLCTRSTPSDRPSME 696
G + N+ E+ + E G + + L ++ L C + P +RP+ E
Sbjct: 205 PG--MNNR-------EVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFE 251
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 7e-06
Identities = 55/253 (21%), Positives = 103/253 (40%), Gaps = 45/253 (17%)
Query: 468 PTGITVSVKKI--EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525
TG V++K I E + KI++E I + +H N+++ G + + +++ ++
Sbjct: 23 RTGKEVAIKVIKLESKEKKEKIINE-IQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG 81
Query: 526 GNLSEKIRTKR-----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580
G+L + +++ A + + +GL +LH + I H D+KA+NI+ + E
Sbjct: 82 GSLKDLLKSTNQTLTESQIAY--VCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGE 136
Query: 581 PHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNA---MKEEMY---MDVYGFGEIILEIL 634
L +FG QL+D + T ++ A + + Y D++ G +E L
Sbjct: 137 VKLIDFGLS--AQLSDTKARNTMVGT---PYWMAPEVINGKPYDYKADIWSLGITAIE-L 190
Query: 635 TNGRL-------TNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRS 687
G+ A + GL S +D +K C +
Sbjct: 191 AEGKPPYSELPPMKALFKIATNGPPGLRNPEKW------SDEFKDFLK-------KCLQK 237
Query: 688 TPSDRPSMEEALK 700
P RP+ E+ LK
Sbjct: 238 NPEKRPTAEQLLK 250
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 47.6 bits (113), Expect = 9e-06
Identities = 60/260 (23%), Positives = 102/260 (39%), Gaps = 48/260 (18%)
Query: 469 TGITVSVKKIEW----GATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYD 521
TG ++VK++ + + + ++V I + H ++IR+LG L +
Sbjct: 24 TGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVE 83
Query: 522 YLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 577
++ G++S + K Y + RGL +LH + I H D+K +N++ D
Sbjct: 84 WMAGGSVSHLLSKYGAFKEAVIINY--TEQLLRGLSYLHEN---QIIHRDVKGANLLIDS 138
Query: 578 N-MEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAM------------KEEMY---M 621
+A+FG A AK T +GEF + + E Y
Sbjct: 139 TGQRLRIADFG-------AAARLAAKG--TGAGEFQGQLLGTIAFMAPEVLRGEQYGRSC 189
Query: 622 DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS-SSSLQDEIKLVLDV 680
DV+ G +I+E+ T + N L+ ++ + S L ++ DV
Sbjct: 190 DVWSVGCVIIEMAT-AKPPWNAEKHSNHL--ALIFKIASATTAPSIPEHLSPGLR---DV 243
Query: 681 ALLCTRSTPSDRPSMEEALK 700
L C P DRP E LK
Sbjct: 244 TLRCLELQPEDRPPSRELLK 263
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 47.2 bits (113), Expect = 1e-05
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 13/95 (13%)
Query: 499 RHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKR----DWAAKY--KIVLGVARGL 552
H +I+L + Y + +Y PNG L + IR Y +I+L +
Sbjct: 60 GHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALE--- 116
Query: 553 CFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG 587
+LH I H DLK NI+ D++M + +FG
Sbjct: 117 -YLHSK---GIIHRDLKPENILLDKDMHIKITDFG 147
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Score = 47.0 bits (111), Expect = 2e-05
Identities = 63/241 (26%), Positives = 101/241 (41%), Gaps = 30/241 (12%)
Query: 473 VSVKKIEWGATRIK-----IVSEFITRIGTVRHKNLIRLLGFCYNR-HQAYLLYDYLPNG 526
V++KK+ + + I+ E + + +RH N I+ G CY R H A+L+ +Y G
Sbjct: 43 VAIKKMSYSGKQSNEKWQDIIKE-VRFLQKLRHPNTIQYRG-CYLREHTAWLVMEYCL-G 99
Query: 527 NLSEKIRTKRDWAAKYKIVL---GVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 583
+ S+ + + + +I G +GL +LH + H D+KA NI+ E L
Sbjct: 100 SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKL 156
Query: 584 AEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMY---MDVYGFGEIILEILTNGRLT 640
+FG + A+ F W + E AM E Y +DV+ G +T L
Sbjct: 157 GDFGSASIMAPAN-XFVGTPYWM-APEVILAMDEGQYDGKVDVWSLG------ITCIELA 208
Query: 641 NAGSSLQN-KPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEAL 699
L N + L NE+ S + + +D C + P DRP+ E L
Sbjct: 209 ERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDS---CLQKIPQDRPTSEVLL 265
Query: 700 K 700
K
Sbjct: 266 K 266
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 46.4 bits (111), Expect = 2e-05
Identities = 53/253 (20%), Positives = 101/253 (39%), Gaps = 41/253 (16%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRIG---TVRHKNLIRLLGFCYNR-HQAYLLY-DYL 523
TG ++VK +E + + I +++H N++R G + ++ +Y+
Sbjct: 24 TGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYV 83
Query: 524 PNGNLSEKIRTKRDWAAKYKIVLGVAR----GLCFLH-HDCYPAIPHGDLKASNIVFDEN 578
G+LS + K+ ++ R GL +LH + I H D+K +NI+ D +
Sbjct: 84 SGGSLSSLL--KKFGKLPEPVIRKYTRQILEGLAYLHSNG----IVHRDIKGANILVDSD 137
Query: 579 MEPHLAEFGF-KYLTQLADGSFPAKIAWTESGEFYNA---MKEEMY---MDVYGFGEIIL 631
LA+FG K L + G + T ++ A ++ E Y D++ G ++
Sbjct: 138 GVVKLADFGCAKRLGDIETGEGTGSVRGT---PYWMAPEVIRGEEYGRAADIWSLGCTVI 194
Query: 632 EILTNGRLTNAGSSLQNKP---IDGLLGEMYNENEVGSSSSLQDEI-KLVLDVALLCTRS 687
E+ T P + + +Y G + + + + D C R
Sbjct: 195 EMATGKP-----------PWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRR 243
Query: 688 TPSDRPSMEEALK 700
P RP+ +E L+
Sbjct: 244 DPKKRPTADELLQ 256
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 46.4 bits (110), Expect = 2e-05
Identities = 59/253 (23%), Positives = 98/253 (38%), Gaps = 49/253 (19%)
Query: 471 ITVSVKKIEWGATRIKIVSEFITR---IGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527
I V+VK + GAT + EF+ + H N+++LLG C Y++ + + G+
Sbjct: 27 IRVAVKTLRKGAT-DQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGD 85
Query: 528 LSEKIRTKRDWAAKY-----------KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD 576
L +R R ++ I L VA+G +L + H DL A N +
Sbjct: 86 LLSYLRDAR--VERFGPPLLTLKELLDICLDVAKGCVYLEQMHF---IHRDLAARNCLVS 140
Query: 577 ENMEP-----HLAEFGF-------KYLTQLADGSFPAKIAWTES---GEFYNAMKEEMYM 621
E + +FG Y + +G P + ES G+F
Sbjct: 141 EKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKF------TTQS 194
Query: 622 DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 681
DV+ FG ++ EILT G+ + Q +L + + + D+I +
Sbjct: 195 DVWSFGVLMWEILTLGQQPYPALNNQE-----VLQHVTAGGRLQKPENCPDKIY---QLM 246
Query: 682 LLCTRSTPSDRPS 694
C PS+RP+
Sbjct: 247 TNCWAQDPSERPT 259
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 45.9 bits (110), Expect = 3e-05
Identities = 35/132 (26%), Positives = 56/132 (42%), Gaps = 24/132 (18%)
Query: 469 TGITVSVKKIEWG---------ATR-IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518
TG V++KKI A R I ++ E +H N+++LL + + YL
Sbjct: 23 TGEIVALKKIRLDNEEEGIPSTALREISLLKEL-------KHPNIVKLLDVIHTERKLYL 75
Query: 519 LYDYLPN--GNLSEKIRTKRDWAAKYK-IVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 575
+++Y +K K I+ + RGL + H I H DLK NI+
Sbjct: 76 VFEYCDMDLKKYLDKRPGPLS-PNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILI 131
Query: 576 DENMEPHLAEFG 587
+ + LA+FG
Sbjct: 132 NRDGVLKLADFG 143
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 3e-05
Identities = 50/200 (25%), Positives = 86/200 (43%), Gaps = 16/200 (8%)
Query: 469 TGITVSVKKI----EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH--QAYLLYDY 522
+G V++KK+ E I + E IT + +RH N++ L +H +L+ +Y
Sbjct: 31 SGEIVALKKVRMDNERDGIPISSLRE-ITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEY 89
Query: 523 LPN--GNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580
+L + + T + ++L + RGL +LH + I H DLK SN++ +
Sbjct: 90 CEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGC 146
Query: 581 PHLAEFGFKYLTQLADGSFPAKIA--WTESGEFYNAMKEE-MYMDVYGFGEIILEILTNG 637
+A+FG L K+ W + E +D++ G I+ E+L +
Sbjct: 147 LKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHK 206
Query: 638 RLTNAGSSL-QNKPIDGLLG 656
L S + Q I LLG
Sbjct: 207 PLLPGKSEIEQLDLIIQLLG 226
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 4e-05
Identities = 57/236 (24%), Positives = 87/236 (36%), Gaps = 69/236 (29%)
Query: 500 HKNLIRLLGFC-----------------YNRH---QAYLLYD-------YLPNGNLSEKI 532
H N++RL+G C + +H ++LLY YLP L
Sbjct: 59 HPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQML---- 114
Query: 533 RTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK--- 589
K + +A G+ +L + H DL A N + +ENM +A+FG
Sbjct: 115 ---------VKFMTDIASGMEYLSSKSFI---HRDLAARNCMLNENMNVCVADFGLSKKI 162
Query: 590 ----YLTQLADGSFPAKIAWTESGEFYNAMKEEMYM---DVYGFGEIILEILTNGRLTNA 642
Y Q P K ES + + +Y DV+ FG + EI T G+
Sbjct: 163 YNGDYYRQGRIAKMPVKWIAIES------LADRVYTTKSDVWSFGVTMWEIATRGQTPYP 216
Query: 643 GSSLQNKPIDGLLGEMYNENEVGSS-SSLQDEIKLVLDVALLCTRSTPSDRPSMEE 697
G ++N E+Y+ G+ D + + + C P DRPS E
Sbjct: 217 G--VENS-------EIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFET 263
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 4e-05
Identities = 67/260 (25%), Positives = 109/260 (41%), Gaps = 46/260 (17%)
Query: 468 PTGITVSVKKIEWG----ATRIKIVSEF-ITRIGTVRHKNLIRLLGFCYNR--HQAYLLY 520
G + K+I++G + ++VSE I R ++H N++R +R Y++
Sbjct: 23 SDGKILVWKEIDYGNMTEKEKQQLVSEVNILR--ELKHPNIVRYYDRIIDRSNQTLYIVM 80
Query: 521 DYLPNGNLSEKI-RTKRDWAAKY---KIVLGVARGLCFLHHDCY------PAIPHGDLKA 570
+Y G+L++ I + K++ KY + + + L ++C+ + H DLK
Sbjct: 81 EYCEGGDLAQLIQKCKKE--RKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKP 138
Query: 571 SNIVFDENMEPHLAEFGF-KYLTQLADGSFPAKIAWTE---SGEFYNAMKEEMYMDVYGF 626
+NI D N L +FG K L D SF T S E N M + D++
Sbjct: 139 ANIFLDANNNVKLGDFGLAKILGH--DSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSL 196
Query: 627 GEIILEILT-----NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 681
G +I E+ R L +K +G + SS L + IK +L+V
Sbjct: 197 GCLIYELCALSPPFTAR-NQL--QLASKIKEG----KFRRIPYRYSSELNEVIKSMLNV- 248
Query: 682 LLCTRSTPSDRPSMEEALKL 701
P RPS EE L+L
Sbjct: 249 ------DPDKRPSTEELLQL 262
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 45.4 bits (107), Expect = 4e-05
Identities = 55/242 (22%), Positives = 105/242 (43%), Gaps = 41/242 (16%)
Query: 473 VSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSE-- 530
V++K ++ G + + + +RH L+ L + Y++ +++ G+L +
Sbjct: 33 VAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVV-SEEPIYIVTEFMGKGSLLDFL 91
Query: 531 --------KIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 582
K+ D AA+ +A G+ ++ Y H DL+A+NI+ +N+
Sbjct: 92 KEGDGKYLKLPQLVDMAAQ------IADGMAYIERMNYI---HRDLRAANILVGDNLVCK 142
Query: 583 LAEFGFKYLTQLADGSFPAK------IAWTE-SGEFYNAMKEEMYMDVYGFGEIILEILT 635
+A+FG L + D + A+ I WT Y + + DV+ FG ++ E++T
Sbjct: 143 IADFGLARLIE--DNEYTARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELVT 198
Query: 636 NGRLTNAGSSLQNKPIDGLLGEMYN-ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPS 694
GR+ G + N+ + + Y G SL + +K LC + P +RP+
Sbjct: 199 KGRVPYPG--MVNREVLEQVERGYRMPCPQGCPESLHELMK-------LCWKKDPDERPT 249
Query: 695 ME 696
E
Sbjct: 250 FE 251
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 5e-05
Identities = 53/246 (21%), Positives = 93/246 (37%), Gaps = 29/246 (11%)
Query: 468 PTGITVSVKKI---EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524
PTG ++KKI R +++ E T +++ G Y + ++ +Y+
Sbjct: 24 PTGKIYALKKIHVDGDEEFRKQLLRELKTLRSC-ESPYVVKCYGAFYKEGEISIVLEYMD 82
Query: 525 NGNLSEKIRTKRDWAAKY--KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 582
G+L++ ++ I + +GL +LH + I H D+K SN++ + E
Sbjct: 83 GGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRH--IIHRDIKPSNLLINSKGEVK 140
Query: 583 LAEFGF-KYLTQLADG--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGR- 638
+A+FG K L D +F + + S E D++ G +LE G+
Sbjct: 141 IADFGISKVLENTLDQCNTFVGTVTYM-SPERIQGESYSYAADIWSLGLTLLECAL-GKF 198
Query: 639 -LTNAGSSLQNKPIDGLL----GEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRP 693
G Q + + G + S +D I C + P RP
Sbjct: 199 PFLPPG---QPSFFELMQAICDGPPPSLPAEEFSPEFRDFIS-------ACLQKDPKKRP 248
Query: 694 SMEEAL 699
S E L
Sbjct: 249 SAAELL 254
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 6e-05
Identities = 63/229 (27%), Positives = 92/229 (40%), Gaps = 51/229 (22%)
Query: 500 HKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIR-----------TKRDWAAKY------ 542
H N+++LLG C LL++Y+ G+L+E +R A K
Sbjct: 67 HPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLP 126
Query: 543 -------KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK---YLT 592
I VA G+ +L + H DL N + ENM +A+FG Y
Sbjct: 127 LSCTEQLCIAKQVAAGMAYLSERKFV---HRDLATRNCLVGENMVVKIADFGLSRNIYSA 183
Query: 593 QL--ADGSFPAKIAWT--ESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN 648
A + I W ES FYN E DV+ +G ++ EI + G +Q
Sbjct: 184 DYYKASENDAIPIRWMPPES-IFYNRYTTE--SDVWAYGVVLWEIFSYG--------MQ- 231
Query: 649 KPIDGLLGE--MYNENEVGSSSSLQDEIKL-VLDVALLCTRSTPSDRPS 694
P G+ E +Y + G+ S D L + ++ LC PSDRPS
Sbjct: 232 -PYYGMAHEEVIYYVRD-GNVLSCPDNCPLELYNLMRLCWSKLPSDRPS 278
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 6e-05
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 22/171 (12%)
Query: 483 TRIKIVSEFITR---IGTVRHKNLIRLLGFCYNRHQAYL-LYDYLPNGNLSEKIRT-KRD 537
T ++ V +F+ + H N++ LLG C + L + Y+ +G+L IR+ +
Sbjct: 35 TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHN 94
Query: 538 WAAKYKIVLG--VARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG-------- 587
K I G VA+G+ +L + H DL A N + DE+ +A+FG
Sbjct: 95 PTVKDLIGFGLQVAKGMEYLASKKFV---HRDLAARNCMLDESFTVKVADFGLARDIYDK 151
Query: 588 -FKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNG 637
+ + P K ES + K DV+ FG ++ E++T G
Sbjct: 152 EYYSVHNHTGAKLPVKWMALESLQTQ---KFTTKSDVWSFGVLLWELMTRG 199
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 9e-05
Identities = 62/275 (22%), Positives = 102/275 (37%), Gaps = 64/275 (23%)
Query: 460 AAGCKAVLPTGITVSVKKI--EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 517
AA C LP V++K+I E T + + + + + H N+++ + +
Sbjct: 19 AAIC---LPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELW 75
Query: 518 LLYDYLPNGNLSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASN 572
L+ YL G+L + +++ D A ++ V +GL +LH + H D+KA N
Sbjct: 76 LVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGN 132
Query: 573 IVFDENMEPHLAEFG-----FKY--LTQLADGSFPAKIAWT-----ESGEFYNAMKEEMY 620
I+ E+ +A+FG T+ +F W E Y+
Sbjct: 133 ILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFK----- 187
Query: 621 MDVYGFGEIILEILTNGR---------------LTNAGSSLQNKPIDGLLGEMYNENEVG 665
D++ FG +E L G L N SL+ +
Sbjct: 188 ADIWSFGITAIE-LATGAAPYSKYPPMKVLMLTLQNDPPSLE-----------TGADYKK 235
Query: 666 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700
S S + I LC + PS RP+ EE LK
Sbjct: 236 YSKSFRKMIS-------LCLQKDPSKRPTAEELLK 263
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 1e-04
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 23/183 (12%)
Query: 471 ITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527
I V++K ++ G T R +SE + +G H N+I L G ++ +++ NG
Sbjct: 33 IFVAIKTLKSGYTEKQRRDFLSE-ASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGA 91
Query: 528 LSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 584
L +R ++V G+A G+ +L Y H DL A NI+ + N+ ++
Sbjct: 92 LDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNY---VHRDLAARNILVNSNLVCKVS 148
Query: 585 EFGF-KYL---------TQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEIL 634
+FG ++L T G P I WT + E K DV+ +G ++ E++
Sbjct: 149 DFGLSRFLEDDTSDPTYTSSLGGKIP--IRWT-APEAIAYRKFTSASDVWSYGIVMWEVM 205
Query: 635 TNG 637
+ G
Sbjct: 206 SYG 208
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 44.1 bits (105), Expect = 1e-04
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 43/143 (30%)
Query: 469 TGITVSVKKIEWG------------ATR-IKIVSEFITRIGTVRHKNLIRLLG-FCYNRH 514
TG V++KKI+ G A R IK++ E +H N+I LL F + +
Sbjct: 24 TGRIVAIKKIKLGERKEAKDGINFTALREIKLLQEL-------KHPNIIGLLDVFGHKSN 76
Query: 515 QAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVA----------RGLCFLHHDCYPAIP 564
L+++++ +L + I+ K IVL A RGL +LH + I
Sbjct: 77 -INLVFEFME-TDLEKVIKDK-------SIVLTPADIKSYMLMTLRGLEYLH-SNW--IL 124
Query: 565 HGDLKASNIVFDENMEPHLAEFG 587
H DLK +N++ + LA+FG
Sbjct: 125 HRDLKPNNLLIASDGVLKLADFG 147
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 39.4 bits (93), Expect = 2e-04
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 270 KLESLFLFRNQLAGQVPWE-FSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYN 327
L+SL L N+L +P F + LK LDLS N L+ PE+F+ L +LR L L N
Sbjct: 1 NLKSLDLSNNRLTV-IPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGN 58
|
Length = 60 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 2e-04
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 495 IGTVRHKNLIRLLGFCYN-RHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIV---LGVAR 550
+ +V H +++RLLG C + + Q L+ +P G L + +R +D ++ + +A+
Sbjct: 63 MASVDHPHVVRLLGICLSSQVQ--LITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAK 120
Query: 551 GLCFL--HHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK-----I 603
G+ +L + H DL A N++ + +FG L + + + A+ I
Sbjct: 121 GMSYLEEKR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPI 175
Query: 604 AWT--ES---GEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAG 643
W ES + + DV+ +G + E++T G G
Sbjct: 176 KWMALESILHRIYTHK------SDVWSYGVTVWELMTFGAKPYEG 214
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 2e-04
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 24/132 (18%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRI-------GTVRHKNLIRLLGFCYNRHQAYLLYD 521
TG V++K+I KI E + I ++H N+++ +G Y++ +
Sbjct: 24 TGDFVAIKQIS----LEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79
Query: 522 YLPNGNLSEKIRTKR------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 575
Y NG+L + I K+ A Y V V +GL +LH + H D+KA+NI+
Sbjct: 80 YAENGSLRQII--KKFGPFPESLVAVY--VYQVLQGLAYLHEQ---GVIHRDIKAANILT 132
Query: 576 DENMEPHLAEFG 587
++ LA+FG
Sbjct: 133 TKDGVVKLADFG 144
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRIGTVR---HKNLIRLLGFCYNRHQAYLLYDYLPN 525
TG V++KKI + S I I ++ H N+++LL + ++ YL++++
Sbjct: 24 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF--- 80
Query: 526 GNLSEKIRTKRDWAAKYKIVLGVAR--------GLCFLHHDCYPAIPHGDLKASNIVFDE 577
L + ++ D + I L + + GL F H + H DLK N++ +
Sbjct: 81 --LHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINT 135
Query: 578 NMEPHLAEFG 587
LA+FG
Sbjct: 136 EGAIKLADFG 145
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 2e-04
Identities = 58/233 (24%), Positives = 84/233 (36%), Gaps = 60/233 (25%)
Query: 499 RHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLH 556
+H NL++ G +R + Y+ +Y G L E + R D L + GL +LH
Sbjct: 57 KHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLH 116
Query: 557 HDCYPAIPHGDLKASNIVFDENMEPHLAEFG-FKYLTQLADGSFPAKIAWTESGEFYNAM 615
I H D+K +NI D N L +FG L T E +
Sbjct: 117 SH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT---------TMGEEVQSLA 164
Query: 616 KEEMYM-----------------DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGE- 657
YM D++ G ++LE+ T G+ +P L E
Sbjct: 165 GTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMAT-GK----------RPWSELDNEF 213
Query: 658 --MYNENEVGS--------SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700
M++ VG+ S L E K LD C S P RP+ E L+
Sbjct: 214 QIMFH---VGAGHKPPIPDSLQLSPEGKDFLD---RCLESDPKKRPTASELLQ 260
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 2e-04
Identities = 59/277 (21%), Positives = 106/277 (38%), Gaps = 55/277 (19%)
Query: 467 LPTGITVSVKKIEWGATRIK---IVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 523
TV+VK ++ A+ + ++SEF + V H ++I+L G C L+ +Y
Sbjct: 27 RAGYTTVAVKMLKENASSSELRDLLSEF-NLLKQVNHPHVIKLYGACSQDGPLLLIVEYA 85
Query: 524 PNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIP------------------- 564
G+L +R R Y + R +L + A+
Sbjct: 86 KYGSLRSFLRESRKVGPSY-LGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA 144
Query: 565 -----HGDLKASNIVFDENMEPHLAEFGFK--------YLTQLADGSFPAKIAWTESGEF 611
H DL A N++ E + +++FG Y+ + + G P K ES
Sbjct: 145 EMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKR-SKGRIPVKWMAIES--- 200
Query: 612 YNAMKEEMYM---DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 668
+ + +Y DV+ FG ++ EI+T G G + + + LL Y + S
Sbjct: 201 ---LFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER--LFNLLKTGYRMERPENCS 255
Query: 669 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705
+ + ++ L C + P RP+ + K L +
Sbjct: 256 ------EEMYNLMLTCWKQEPDKRPTFADISKELEKM 286
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 2e-04
Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
Query: 473 VSVKKIEWGATRIKIVSEFITRIGT---VRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529
V++K I+ G+ EFI + H+ L++L G C + Y++ +Y+ NG L
Sbjct: 31 VAIKMIKEGSMS---EDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLL 87
Query: 530 EKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEF 586
+R + ++ V G+ +L + H DL A N + D+ +++F
Sbjct: 88 NYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQF---IHRDLAARNCLVDDQGCVKVSDF 144
Query: 587 GF-KYL-----TQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRL 639
G +Y+ T FP + W+ E K DV+ FG ++ E+ + G++
Sbjct: 145 GLSRYVLDDEYTSSVGSKFPVR--WSPP-EVLLYSKFSSKSDVWAFGVLMWEVYSLGKM 200
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 2e-04
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 468 PTGITVSVKKIEWGATRIKIVSEFITRI-------GTVRHKNLIRLLGFCYNRHQAYLLY 520
PTG ++VK I R++I +I ++ G YN +
Sbjct: 24 PTGKIMAVKTI-----RLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICM 78
Query: 521 DYLPNGNLSEKIRTKRDWAAKY---KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 577
+Y+ G+L + ++ + + KI + V +GL +LH I H D+K SNI+ +
Sbjct: 79 EYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKH--KIIHRDVKPSNILVNS 136
Query: 578 NMEPHLAEFG 587
+ L +FG
Sbjct: 137 RGQIKLCDFG 146
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|219766 pfam08263, LRRNT_2, Leucine rich repeat N-terminal domain | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 2e-04
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 8/44 (18%)
Query: 29 EALLSLKSELVDD-FNSLHDWFVPPGVNPAGKIYACSWSGVKCN 71
+ALL+ KS L D +L W P +P CSW+GV C+
Sbjct: 6 DALLAFKSSLNGDPSGALSSW-NPSSSDP------CSWTGVTCD 42
|
Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats. Length = 42 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 3e-04
Identities = 64/257 (24%), Positives = 105/257 (40%), Gaps = 41/257 (15%)
Query: 469 TGITVSVKKIEW-GATRIKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQAYLLYDYLPN 525
TG V+VKK++ A ++ I + +++H N+++ G CY+ R L+ +YLP
Sbjct: 32 TGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPY 91
Query: 526 GNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDC----YPAIP---HGDLKASNIVFDEN 578
G+L RD+ K++ L + L + C Y H DL NI+ +
Sbjct: 92 GSL-------RDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESE 144
Query: 579 MEPHLAEFGF-KYLTQLAD-------GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEII 630
+ +FG K L Q + G P I W + E K + DV+ FG ++
Sbjct: 145 NRVKIGDFGLTKVLPQDKEYYKVREPGESP--IFWY-APESLTESKFSVASDVWSFGVVL 201
Query: 631 LEILTNGR---------LTNAGSSLQNKPIDGLLGEMYNEN-EVGSSSSLQDEIKLVLDV 680
E+ T + G+ Q + I L E+ N + + EI ++
Sbjct: 202 YELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIM-- 259
Query: 681 ALLCTRSTPSDRPSMEE 697
C + PS RPS E
Sbjct: 260 -KECWNNDPSQRPSFSE 275
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 56/240 (23%), Positives = 92/240 (38%), Gaps = 60/240 (25%)
Query: 496 GTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYK-----------I 544
+ HKN++RLLG C Y++ +Y G+L + +R + K K +
Sbjct: 63 RKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVAL 122
Query: 545 VLGVARGLCFLHHDCYPAIPHGDLKASN-IVFDENM----------EPHLAEFGFKYLTQ 593
+A G+ L + + H DL A N +V + + + +E+ +K
Sbjct: 123 CTQIALGMDHLSNARF---VHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEY-YKLRNA 178
Query: 594 LADGSFPAKIAWTESGEFYNAMKEEMY---MDVYGFGEIILEILTNGRLTNAGSS----- 645
L + W A++E+ + DV+ FG ++ E+ T G L G S
Sbjct: 179 L------IPLRWLA----PEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVL 228
Query: 646 --LQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 703
LQ ++ + E G S L KL+ C P DRPS E + L
Sbjct: 229 NRLQAGKLELPVPE-------GCPSRLY---KLMTR----CWAVNPKDRPSFSELVSALG 274
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 37/167 (22%), Positives = 68/167 (40%), Gaps = 35/167 (20%)
Query: 498 VRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSE------------------KIRTKRDWA 539
++H N++ LLG C +L++YL +G+L E +++ D +
Sbjct: 65 LQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCS 124
Query: 540 AKYKIVLGVARGLCFL--HHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF-------KY 590
I + +A G+ +L HH H DL A N + E + +++FG Y
Sbjct: 125 DFLHIAIQIAAGMEYLSSHHFV-----HRDLAARNCLVGEGLTVKISDFGLSRDIYSADY 179
Query: 591 LTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNG 637
+ P + E+ + E D++ FG ++ EI + G
Sbjct: 180 YRVQSKSLLPVRWMPPEAILYGKFTTES---DIWSFGVVLWEIFSYG 223
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 3e-04
Identities = 36/137 (26%), Positives = 57/137 (41%), Gaps = 21/137 (15%)
Query: 517 YLLYDYLPNGNLSEKIRT----KRDWAAKY--KIVLGVARGLCFLHHDCYPAIPHGDLKA 570
YL+ +YL G+ + I+T DWA +Y ++VLGV LH I H D+K
Sbjct: 73 YLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVE----DLHQR---GIIHRDIKP 125
Query: 571 SNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTE---SGEFYNAMKEEMYMDVYGFG 627
N++ D+ L +FG G K T + E + ++ D + G
Sbjct: 126 ENLLIDQTGHLKLTDFGLSRN-----GLENKKFVGTPDYLAPETILGVGDDKMSDWWSLG 180
Query: 628 EIILEILTNGRLTNAGS 644
+I E L +A +
Sbjct: 181 CVIFEFLFGYPPFHAET 197
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 42.4 bits (99), Expect = 6e-04
Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 29/202 (14%)
Query: 467 LPTGITVSVK---KIEWGATRIKIVSEFITR---IGTVRHKNLIRLLGFCYNRHQAYLLY 520
+P G TV + KI T K EF+ + ++ H +L+RLLG C + L+
Sbjct: 29 VPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVT 87
Query: 521 DYLPNGNLSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 577
+P+G L + + +D ++ + +A+G+ +L + H DL A N++
Sbjct: 88 QLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKS 144
Query: 578 NMEPHLAEFGFKYLTQLADGSFPAK-----IAWTESGEFYNAMKEEMYMDVYGFGEIILE 632
+ +FG L + + + A I W + E + K DV+ +G I E
Sbjct: 145 PNHVKITDFGLARLLEGDEKEYNADGGKMPIKWM-ALECIHYRKFTHQSDVWSYGVTIWE 203
Query: 633 ILTNGRLTNAGSSLQNKPIDGL 654
++T G KP DG+
Sbjct: 204 LMTFG----------GKPYDGI 215
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 6e-04
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 31/186 (16%)
Query: 471 ITVSVKKIEWGATRIKIVSEFITR---IGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527
I V++K ++ G T K +F++ +G H N+I L G ++ +Y+ NG+
Sbjct: 33 IPVAIKTLKAGYTE-KQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGS 91
Query: 528 LSEKIRTKRDWAAKYKIVL------GVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 581
L +R K D ++ ++ G+A G+ +L Y H DL A NI+ + N+
Sbjct: 92 LDAFLR-KHD--GQFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILVNSNLVC 145
Query: 582 HLAEFGFK----------YLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIIL 631
+++FG Y T+ G P I WT + E K DV+ +G ++
Sbjct: 146 KVSDFGLSRVLEDDPEAAYTTR--GGKIP--IRWT-APEAIAYRKFTSASDVWSYGIVMW 200
Query: 632 EILTNG 637
E+++ G
Sbjct: 201 EVMSYG 206
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 6e-04
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 16/158 (10%)
Query: 500 HKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLH 556
H N++RL+G C + Y++ + + G+ +RT + ++V A G+ +L
Sbjct: 52 HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLE 111
Query: 557 HDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK-------IAWTESG 609
H DL A N + E +++FG + DG + + + WT +
Sbjct: 112 SKH---CIHRDLAARNCLVTEKNVLKISDFGMS--REEEDGVYASTGGMKQIPVKWT-AP 165
Query: 610 EFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ 647
E N + DV+ FG ++ E + G + A S Q
Sbjct: 166 EALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ 203
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 7e-04
Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 41/191 (21%)
Query: 469 TGITVSVKKI------EWGATR----IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518
TG V++KKI E IK++ E H N+I+LL ++ YL
Sbjct: 23 TGEIVAIKKIKLRFESEGIPKTALREIKLLKEL-------NHPNIIKLLDVFRHKGDLYL 75
Query: 519 LYDYLPNGNLSEKIRTKRDWAAKYKI---VLGVARGLCFLH-HDCYPAIPHGDLKASNIV 574
+++++ + +L + I+ ++ + I + + +GL F H H H DLK N++
Sbjct: 76 VFEFM-DTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGIL----HRDLKPENLL 130
Query: 575 FDENMEPHLAEFGFKYLTQLADGSFPAKIAWTE--SGEFYNA----MKEEMY---MDVYG 625
+ LA+FG L + +T +Y A + ++ Y +D++
Sbjct: 131 INTEGVLKLADFG---LARSFGSPVR---PYTHYVVTRWYRAPELLLGDKGYSTPVDIWS 184
Query: 626 FGEIILEILTN 636
G I E+L+
Sbjct: 185 VGCIFAELLSR 195
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.001
Identities = 53/228 (23%), Positives = 87/228 (38%), Gaps = 57/228 (25%)
Query: 498 VRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVAR----GLC 553
++H N+++ LG Y+ + +P G+L++ + K+ + ++ R GL
Sbjct: 59 LQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLL--KKYGSFPEPVIRLYTRQILLGLE 116
Query: 554 FLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF-KYLTQLADG-SFPAKIAWTESGEF 611
+LH H D+K +NI+ D N LA+FG K + + + SF W
Sbjct: 117 YLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYW------ 167
Query: 612 YNAMKEEMYM---------DVYGFGEIILEILTN----------GRLTNAGSSLQNKPID 652
M E+ D++ G +LE+ T + G S + PI
Sbjct: 168 ---MAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPI- 223
Query: 653 GLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700
L DE K D L C + PS RP+ E L+
Sbjct: 224 --------------PDHLSDEAK---DFILKCLQRDPSLRPTAAELLE 254
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 0.002
Identities = 32/129 (24%), Positives = 61/129 (47%), Gaps = 8/129 (6%)
Query: 463 CKAV-LPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521
KA+ TG V++K + +I+ E I+ + +++ G + +++ +
Sbjct: 20 YKAIHKETGQVVAIKVVPVEEDLQEIIKE-ISILKQCDSPYIVKYYGSYFKNTDLWIVME 78
Query: 522 YLPNGNLSE--KIRTKRDWAAKYKIVL-GVARGLCFLHHDCYPAIPHGDLKASNIVFDEN 578
Y G++S+ KI K + +L +GL +LH + H D+KA NI+ +E
Sbjct: 79 YCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEE 135
Query: 579 MEPHLAEFG 587
+ LA+FG
Sbjct: 136 GQAKLADFG 144
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 0.002
Identities = 28/129 (21%), Positives = 59/129 (45%), Gaps = 18/129 (13%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLG-FCYNRHQAYLLYDYLPNGN 527
TG V++KK+ +++ I + +H N++ + +++ +Y+ G+
Sbjct: 43 TGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDE-LWVVMEYMDGGS 101
Query: 528 LSEKIR------TKRDWAAKYKIVLGVARGLCFLH--HDCYPAIPHGDLKASNIVFDENM 579
L++ I + A + V +GL +LH + + H D+K+ NI+ ++
Sbjct: 102 LTDIITQNFVRMNEPQIAY---VCREVLQGLEYLHSQN-----VIHRDIKSDNILLSKDG 153
Query: 580 EPHLAEFGF 588
LA+FGF
Sbjct: 154 SVKLADFGF 162
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.002
Identities = 49/246 (19%), Positives = 89/246 (36%), Gaps = 71/246 (28%)
Query: 497 TVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAK--------------- 541
+H+N+++ G C ++++Y+ +G+L++ +R+ AA
Sbjct: 64 NFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQ 123
Query: 542 -YKIVLGVARGLCFL--HHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK---YLTQL- 594
+I + +A G+ +L H H DL N + ++ + +FG Y T
Sbjct: 124 LLQIAVQIASGMVYLASQH-----FVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYY 178
Query: 595 -ADGSFPAKIAWTESGEFYNAMKEEMYM--------DVYGFGEIILEILTNGRLTNAGSS 645
G I W M E M DV+ FG ++ EI T G+
Sbjct: 179 RVGGHTMLPIRW---------MPPESIMYRKFTTESDVWSFGVVLWEIFTYGK------- 222
Query: 646 LQNKPIDGLLGEMYNENEVGSSSSLQDEIKL---------VLDVALLCTRSTPSDRPSME 696
+P G + EV + L V D+ L C + P R +++
Sbjct: 223 ---QPWYG-----LSNEEV--IECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIK 272
Query: 697 EALKLL 702
+ + L
Sbjct: 273 DIHERL 278
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.002
Identities = 51/225 (22%), Positives = 88/225 (39%), Gaps = 41/225 (18%)
Query: 500 HKNLIRLLGFCYNRHQA--YLLYDYLPNGNLS---EKIRTKRDWAAKY---KIVLGVARG 551
+++ G + + + +Y G+L +K++ + + KI V +G
Sbjct: 58 SPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKG 117
Query: 552 LCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESG-E 610
L +LH I H D+K SNI+ + L +FG G +A T +G
Sbjct: 118 LSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFG-------VSGELVNSLAGTFTGTS 167
Query: 611 FYNA---MKEEMYM---DVYGFGEIILEILTNGRLTNAGSSLQN-KPIDGLLG------- 656
FY A ++ + Y DV+ G +LE+ R PI+ LL
Sbjct: 168 FYMAPERIQGKPYSITSDVWSLGLTLLEV-AQNRFPFPPEGEPPLGPIE-LLSYIVNMPN 225
Query: 657 -EMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700
E+ +E G S +E K + L + P+ RP+ + L+
Sbjct: 226 PELKDEPGNGIKWS--EEFKDFIKQCL--EKD-PTRRPTPWDMLE 265
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.003
Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 35/166 (21%)
Query: 543 KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK-------YLTQLA 595
+ ++ +A G+ +L H DL A N + +ENM +A+FG Y Q
Sbjct: 117 RFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGC 173
Query: 596 DGSFPAKIAWTESGEFYNAMKEEMYM---DVYGFGEIILEILTNGRLTNAGSSLQNKPID 652
P K ES + + +Y DV+ FG + EI+T G+ AG ++N
Sbjct: 174 ASKLPVKWLALES------LADNVYTTHSDVWAFGVTMWEIMTRGQTPYAG--VEN---- 221
Query: 653 GLLGEMYNE----NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPS 694
E+YN N + ++ V ++ C P RPS
Sbjct: 222 ---SEIYNYLIKGNRLKQPPDCLED---VYELMCQCWSPEPKCRPS 261
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.003
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 28/185 (15%)
Query: 471 ITVSVKKIEWGA---TRIKIVSEF--ITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525
+ V+VK ++ A R ++SE ++ +G H+N++ LLG C ++ +Y
Sbjct: 66 MKVAVKMLKPTAHSSEREALMSELKIMSHLGN--HENIVNLLGACTIGGPILVITEYCCY 123
Query: 526 GNLSEKIRTKRDWAAKYKIVLG----VARGLCFL-HHDCYPAIPHGDLKASNIVFDENME 580
G+L +R KR+ + +L VA+G+ FL +C H DL A N++
Sbjct: 124 GDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCI----HRDLAARNVLLTHGKI 179
Query: 581 PHLAEFGF--------KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILE 632
+ +FG Y+ + + P K ES F E DV+ +G ++ E
Sbjct: 180 VKICDFGLARDIMNDSNYVVK-GNARLPVKWMAPES-IFNCVYTFE--SDVWSYGILLWE 235
Query: 633 ILTNG 637
I + G
Sbjct: 236 IFSLG 240
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.003
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 41/191 (21%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRIGTVR---HKNLIRLLGFCYNRHQA--YLLYDYL 523
TG V+VK ++ + + S + I ++ H+N+++ G C + L+ +Y+
Sbjct: 32 TGEMVAVKTLKRECGQ-QNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYV 90
Query: 524 PNGNLSEKIRTKRDWAAKYKIVLG--------VARGLCFLHHDCYPAIPHGDLKASNIVF 575
P G+L RD+ K+K+ L + G+ +LH Y H DL A N++
Sbjct: 91 PLGSL-------RDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYI---HRDLAARNVLL 140
Query: 576 DENMEPHLAEFGF--------KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM---DVY 624
D + + +FG +Y DG P E +KE + DV+
Sbjct: 141 DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVE------CLKENKFSYASDVW 194
Query: 625 GFGEIILEILT 635
FG + E+LT
Sbjct: 195 SFGVTLYELLT 205
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.003
Identities = 32/127 (25%), Positives = 62/127 (48%), Gaps = 12/127 (9%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRIG---TVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525
T T+++KKI + S I I ++H N++RL ++ + YL+++YL +
Sbjct: 26 TNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYL-D 84
Query: 526 GNLSEKIRTKRDWAAKYKIV----LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 581
+L + + + D+A +++ + RG+ + H + H DLK N++ D
Sbjct: 85 LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNA 141
Query: 582 -HLAEFG 587
LA+FG
Sbjct: 142 LKLADFG 148
|
Length = 294 |
| >gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 39.4 bits (92), Expect = 0.003
Identities = 27/131 (20%), Positives = 59/131 (45%), Gaps = 19/131 (14%)
Query: 469 TGITVSVKKIEWG------ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522
TG ++VK++ + + + I + ++H+ +++ G + + +Y
Sbjct: 26 TGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEY 85
Query: 523 LPNGNLSEKIRT----KRDWAAKY--KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD 576
+P G++ ++++ KY +I+ GV +LH + I H D+K +NI+ D
Sbjct: 86 MPGGSVKDQLKAYGALTETVTRKYTRQILEGVE----YLHSN---MIVHRDIKGANILRD 138
Query: 577 ENMEPHLAEFG 587
L +FG
Sbjct: 139 SAGNVKLGDFG 149
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 39.4 bits (92), Expect = 0.004
Identities = 45/194 (23%), Positives = 82/194 (42%), Gaps = 32/194 (16%)
Query: 469 TGITVSVKKIEWGAT-------RIK-IVSEFITRIGTVR---HKNLIRLLGFCYNRHQAY 517
TG ++VK++E AT R K +V + I T++ H N+++ LGF
Sbjct: 25 TGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYLS 84
Query: 518 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 575
+ +Y+P G++ +RT + + V GL +LH I H DLKA N++
Sbjct: 85 IFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLV 141
Query: 576 DENMEPHLAEFGFKYLTQLADGSFPA-----KIAW------TESGEFYNAMKEEMYMDVY 624
D + +++FG + + + W + Y+A +D++
Sbjct: 142 DADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAK-----VDIW 196
Query: 625 GFGEIILEILTNGR 638
G ++LE+ R
Sbjct: 197 SLGCVVLEMFAGRR 210
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.004
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 13/100 (13%)
Query: 498 VRHKNLIRLLGFC------YNRHQA--YLLYDYLPN--GNLSEKIRTKRDWAAKYKIVLG 547
++H+N++ L+ C YNR++ YL++++ + L K + K++
Sbjct: 68 LKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKM 127
Query: 548 VARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG 587
+ GL ++H + I H D+KA+NI+ ++ LA+FG
Sbjct: 128 LLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFG 164
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 710 | |||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.98 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.98 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.98 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.98 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.98 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.98 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.98 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.98 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.98 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.98 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.98 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.98 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.98 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.98 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.98 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.98 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.98 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.98 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.98 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.98 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.98 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.97 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.97 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.97 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.97 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.97 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.97 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.97 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.97 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.97 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.97 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.97 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.97 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.97 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.97 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.97 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.97 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.97 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.97 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.97 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.97 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.97 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.97 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.97 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.97 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.97 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.97 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.97 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.97 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.97 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.97 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.97 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.97 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.97 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.97 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.97 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.97 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.97 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.97 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.97 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.97 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.97 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.97 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.97 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.97 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.97 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.97 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.97 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.97 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.97 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.97 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.97 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.97 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.97 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.97 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.97 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.97 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.96 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.96 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.96 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.96 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.96 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.96 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.96 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.96 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.96 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.96 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.95 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.95 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.95 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.95 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.95 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.95 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.94 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.94 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.94 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.94 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.93 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.93 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.93 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.93 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.92 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.92 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.92 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.91 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.91 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.91 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.9 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.9 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.89 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.89 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.89 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.89 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.89 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.88 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.87 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.87 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.86 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.86 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.85 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.85 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.84 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.82 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.82 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.81 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.8 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.8 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.78 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.78 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.76 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.76 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.76 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.75 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.74 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.72 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.72 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.7 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.69 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.69 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.68 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.68 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.67 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.65 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.64 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.63 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.62 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.62 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.61 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.6 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.55 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.53 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.52 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.51 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.44 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.43 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.39 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.39 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.36 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.34 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.33 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.3 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.27 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.26 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.24 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.09 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 99.05 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.05 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.03 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 98.98 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.97 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 98.96 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 98.96 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.94 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.94 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 98.93 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 98.91 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 98.89 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 98.88 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 98.87 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 98.83 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 98.82 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 98.8 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.79 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 98.74 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.72 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.72 | |
| PF08263 | 43 | LRRNT_2: Leucine rich repeat N-terminal domain; In | 98.71 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 98.71 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.68 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 98.44 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.33 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.32 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 98.32 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.25 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.21 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.19 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.19 | |
| KOG2982 | 418 | consensus Uncharacterized conserved protein [Funct | 98.19 | |
| KOG2982 | 418 | consensus Uncharacterized conserved protein [Funct | 98.11 |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-88 Score=822.48 Aligned_cols=682 Identities=36% Similarity=0.599 Sum_probs=473.0
Q ss_pred chhHHHHHHHHHHHHhccCCChhhHHHHHHHHhhCCCCCCCCCCCCCCCCCCCCCCCCCceeeeeeeCCCCCcEEEEEcC
Q 005177 4 FHCLYLNLFIWLVFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLS 83 (710)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~all~~k~~~~~~~~~l~~w~~~~~~~~~~~~~~C~w~gv~C~~~~~~v~~l~l~ 83 (710)
-||-++++.+..+++..+...++|++||++||+++.+|.+.+.+|+. ..+||.|.||+|++ .++|+.++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~--------~~~~c~w~gv~c~~-~~~v~~L~L~ 77 (968)
T PLN00113 7 QHCPYLIFMLFFLFLNFSMLHAEELELLLSFKSSINDPLKYLSNWNS--------SADVCLWQGITCNN-SSRVVSIDLS 77 (968)
T ss_pred CCCChHHHHHHHHHHHccCCCHHHHHHHHHHHHhCCCCcccCCCCCC--------CCCCCcCcceecCC-CCcEEEEEec
Confidence 37777655555555554556789999999999999888888999963 46799999999986 5789999999
Q ss_pred CCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCcccc-CCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCC
Q 005177 84 MKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFS 162 (710)
Q Consensus 84 ~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~ 162 (710)
++++.|.+++.+.. +++|+.|+|++|+++|.+|..+. .+++|++|+|++|++++.+|. +.+++|++|+|++|.++
T Consensus 78 ~~~i~~~~~~~~~~--l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~ 153 (968)
T PLN00113 78 GKNISGKISSAIFR--LPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLS 153 (968)
T ss_pred CCCccccCChHHhC--CCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCccc
Confidence 99999999888877 89999999999999999998766 888888888888888877764 45677777777777777
Q ss_pred cCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCcccc
Q 005177 163 GSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLG 242 (710)
Q Consensus 163 ~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~ 242 (710)
+.+|..++++++|++|+|++|.+.+.+|..++++++|++|+|++|.+++.+|..++.+++|++|++++|.+.+.+|..++
T Consensus 154 ~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~ 233 (968)
T PLN00113 154 GEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIG 233 (968)
T ss_pred ccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHh
Confidence 77777777777777777777777767777777777777777777777767777777777777777777777666666666
Q ss_pred CCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEE
Q 005177 243 NMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLL 322 (710)
Q Consensus 243 ~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 322 (710)
++++|++|++++|++++.+|..++++++|+.|++++|.+.+.+|..+.++++|+.|++++|.+.+.+|..+.++++|+.|
T Consensus 234 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 313 (968)
T PLN00113 234 GLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEIL 313 (968)
T ss_pred cCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEE
Confidence 66677777777666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred EcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccc-----------------
Q 005177 323 SLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDI----------------- 385 (710)
Q Consensus 323 ~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~----------------- 385 (710)
++++|.+++.+|..+..+++|+.|++++|.+++.+|..++.+++|+.|++++|+++|.+|..+
T Consensus 314 ~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~ 393 (968)
T PLN00113 314 HLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLE 393 (968)
T ss_pred ECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEec
Confidence 666666655555555555555555555555555555555544444444444444433322211
Q ss_pred -------cCCCc--------------------------------------------------------------------
Q 005177 386 -------CSGGV-------------------------------------------------------------------- 390 (710)
Q Consensus 386 -------~~~~~-------------------------------------------------------------------- 390 (710)
..+++
T Consensus 394 ~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~ 473 (968)
T PLN00113 394 GEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFG 473 (968)
T ss_pred ccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccc
Confidence 11111
Q ss_pred ---eeeEecccCCcccchhHHHH---------------------------------------------------------
Q 005177 391 ---LFKLILFSNNFTGIVMFIAA--------------------------------------------------------- 410 (710)
Q Consensus 391 ---L~~l~l~~N~l~g~i~~~~~--------------------------------------------------------- 410 (710)
|+.|++++|+++|.+|-.+.
T Consensus 474 ~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 553 (968)
T PLN00113 474 SKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLD 553 (968)
T ss_pred cccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEE
Confidence 11122222222221110000
Q ss_pred --------------------------------------------------------------------------------
Q 005177 411 -------------------------------------------------------------------------------- 410 (710)
Q Consensus 411 -------------------------------------------------------------------------------- 410 (710)
T Consensus 554 Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~~~~~~~~~~ 633 (968)
T PLN00113 554 LSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFYIT 633 (968)
T ss_pred CCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccccccceeeeehh
Confidence
Q ss_pred ----H-----HHh--hhhhccCCC----------CCcceeeecCC--CcchhhhhhhcCCchhhhhhcCCCCCccEEEEc
Q 005177 411 ----A-----LLG--IFFFRRGGK----------GHWKMISFLGL--PQFTANDVLRSFNSTECEEAARPQSAAGCKAVL 467 (710)
Q Consensus 411 ----~-----~~~--~~~~rr~~~----------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ig~g~~g~vy~~~~ 467 (710)
+ +++ ++++||+++ +.|....+... ..++..++.+.++ ..+++|+|+||.||+|+.
T Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ig~G~~g~Vy~~~~ 711 (968)
T PLN00113 634 CTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITINDILSSLK--EENVISRGKKGASYKGKS 711 (968)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccchhhhHHHHHhhCC--cccEEccCCCeeEEEEEE
Confidence 0 000 011111110 01221111110 1233444555566 678899999999999986
Q ss_pred -CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChhhhhhcCCCHHHHHHHHH
Q 005177 468 -PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVL 546 (710)
Q Consensus 468 -~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~ 546 (710)
.+|..||||+++.... ...+|++.+++++|||||+++|+|.+++..++|||||++|+|.++++ .++|.++.+|+.
T Consensus 712 ~~~~~~vavK~~~~~~~---~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~-~l~~~~~~~i~~ 787 (968)
T PLN00113 712 IKNGMQFVVKEINDVNS---IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR-NLSWERRRKIAI 787 (968)
T ss_pred CCCCcEEEEEEccCCcc---ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh-cCCHHHHHHHHH
Confidence 6899999999975322 22356888999999999999999999999999999999999999997 489999999999
Q ss_pred HHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCcccccccCchhhhhccCCccccceeeH
Q 005177 547 GVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGF 626 (710)
Q Consensus 547 ~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySf 626 (710)
|+|+||+|||+.+.++|+||||||+||+++.++.+++. ||.+....... . ..+...|.+||+.....++.++|||||
T Consensus 788 ~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~-~-~~~t~~y~aPE~~~~~~~~~~sDv~S~ 864 (968)
T PLN00113 788 GIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDT-K-CFISSAYVAPETRETKDITEKSDIYGF 864 (968)
T ss_pred HHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccCC-C-ccccccccCcccccCCCCCcccchhhH
Confidence 99999999998888899999999999999999988876 66554332111 1 123345778898888889999999999
Q ss_pred HHHHHHHHhCCCCCCCCCC----CCccccc----ccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 005177 627 GEIILEILTNGRLTNAGSS----LQNKPID----GLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEA 698 (710)
Q Consensus 627 Gvvl~Elltg~~p~~~~~~----~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~ev 698 (710)
||++|||+||+.|++.... ...|+.. .....+.++..........+++.++.+++.+||+.||++||||+||
T Consensus 865 Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev 944 (968)
T PLN00113 865 GLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDV 944 (968)
T ss_pred HHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHH
Confidence 9999999999999863221 1122211 1112223333111122234566788999999999999999999999
Q ss_pred HHHHhccCC
Q 005177 699 LKLLSGLKP 707 (710)
Q Consensus 699 l~~L~~~~~ 707 (710)
+++|+++.+
T Consensus 945 l~~L~~~~~ 953 (968)
T PLN00113 945 LKTLESASR 953 (968)
T ss_pred HHHHHHhhc
Confidence 999998855
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-53 Score=450.64 Aligned_cols=270 Identities=30% Similarity=0.521 Sum_probs=227.0
Q ss_pred cchh---hhhhhcCCchhhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchh-HHHHHHHHHHHhccCCCCceeEEEEEE
Q 005177 436 QFTA---NDVLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATR-IKIVSEFITRIGTVRHKNLIRLLGFCY 511 (710)
Q Consensus 436 ~~~~---~~~~~~~~~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~-~~~~~~e~~~l~~l~H~niv~l~g~~~ 511 (710)
.|+. ..++++|+ ..+.||+|+||.||||.+++|+.||||++...... .++|..|++++++++|||+|+|+|||.
T Consensus 64 ~fs~~el~~AT~~Fs--~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~ 141 (361)
T KOG1187|consen 64 SFSYDELRKATNNFS--ESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCL 141 (361)
T ss_pred eeeHHHHHHHHhCCc--hhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEe
Confidence 4554 44677899 88999999999999999999999999999876554 677999999999999999999999999
Q ss_pred cCC-ceeEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEccc
Q 005177 512 NRH-QAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEF 586 (710)
Q Consensus 512 ~~~-~~~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df 586 (710)
+.+ +.+||||||++|+|+++|+. .++|.+|++||.++|+||+|||+.+.|+||||||||+|||||+++++||+||
T Consensus 142 e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDF 221 (361)
T KOG1187|consen 142 EGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDF 221 (361)
T ss_pred cCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCc
Confidence 998 59999999999999999986 4589999999999999999999999999999999999999999999999999
Q ss_pred Cccccccc-cCCCCc--ccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCC-----CCCccccc----cc
Q 005177 587 GFKYLTQL-ADGSFP--AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGS-----SLQNKPID----GL 654 (710)
Q Consensus 587 Gla~~~~~-~~~~~~--~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~-----~~~~~~~~----~~ 654 (710)
|+|+.... ...... .++..|.+|||..+...+.|+|||||||+++|++||+++.+... .+..|... ..
T Consensus 222 GLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~ 301 (361)
T KOG1187|consen 222 GLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGK 301 (361)
T ss_pred cCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcc
Confidence 99977653 222111 34556889999999999999999999999999999998877432 23344322 35
Q ss_pred ccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 655 LGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
+.+++|+..........+++.++..+|.+|++.+|++||+|.||+++|+.+..
T Consensus 302 ~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 302 LREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred hhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 67788877321111112678889999999999999999999999999977653
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-44 Score=379.46 Aligned_cols=246 Identities=22% Similarity=0.249 Sum_probs=196.1
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCC-ceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRH-QAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-~~~lv~Ey~~~ 525 (710)
..+.+|+|+||.||+|....-..||||++..... ..+.|.+|+.+|.+++|||||+++|+|.+.. ..++|||||++
T Consensus 45 ~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~ 124 (362)
T KOG0192|consen 45 IEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPG 124 (362)
T ss_pred hhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCC
Confidence 4456999999999999985555599999986432 2568999999999999999999999999887 79999999999
Q ss_pred CChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCC-ceecCCCCCCeEecCCC-ceEEcccCcccccccc--CC
Q 005177 526 GNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPA-IPHGDLKASNIVFDENM-EPHLAEFGFKYLTQLA--DG 597 (710)
Q Consensus 526 gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~-iiHrDlk~~NiLl~~~~-~~kl~DfGla~~~~~~--~~ 597 (710)
|+|.++++. .++|..+++++.|||+||.|||+. + ||||||||+|||++.++ ++||+|||+++..... ..
T Consensus 125 GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~ 201 (362)
T KOG0192|consen 125 GSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSM 201 (362)
T ss_pred CcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeeccccccc
Confidence 999999965 679999999999999999999998 6 99999999999999997 9999999999876532 12
Q ss_pred CCcccccccCchhhhh--ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHH
Q 005177 598 SFPAKIAWTESGEFYN--AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 675 (710)
Q Consensus 598 ~~~~~~~~~~~~e~~~--~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (710)
....++..+++||++. ...++.|+|||||||++|||+||+.||.+-.. ... ...++..... +....+...
T Consensus 202 ~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~~-----~~~v~~~~~R--p~~p~~~~~ 273 (362)
T KOG0192|consen 202 TSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQV-----ASAVVVGGLR--PPIPKECPP 273 (362)
T ss_pred cCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HHH-----HHHHHhcCCC--CCCCccCCH
Confidence 2123344456778877 56899999999999999999999999975443 111 1111111100 111111335
Q ss_pred HHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 676 LVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 676 ~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
.+.+++.+||+.||++||++.|++.+|+.+.
T Consensus 274 ~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~ 304 (362)
T KOG0192|consen 274 HLSSLMERCWLVDPSRRPSFLEIVSRLESIM 304 (362)
T ss_pred HHHHHHHHhCCCCCCcCCCHHHHHHHHHHHH
Confidence 5667888899999999999999999998764
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-45 Score=362.58 Aligned_cols=246 Identities=20% Similarity=0.237 Sum_probs=200.1
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEcCC-ceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH-QAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-~~~lv~Ey~~~ 525 (710)
..+.||+|..|+|||+.+ ++++.+|+|.+... ..-.+++.+|++++.+.+||+||+++|.|+.++ ++.|+||||.+
T Consensus 83 ~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDg 162 (364)
T KOG0581|consen 83 RLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDG 162 (364)
T ss_pred hhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCC
Confidence 567899999999999996 78999999999543 334778899999999999999999999999988 59999999999
Q ss_pred CChhhhhhcC--CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC-CCCccc
Q 005177 526 GNLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD-GSFPAK 602 (710)
Q Consensus 526 gsL~~~l~~~--~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~-~~~~~~ 602 (710)
|||+++++.. .+....-+|+.+|.+||.|||+. .+||||||||+|||++..|++||||||.++...... .++. +
T Consensus 163 GSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~tfv-G 239 (364)
T KOG0581|consen 163 GSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANTFV-G 239 (364)
T ss_pred CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccccHHhhhhhccccc-c
Confidence 9999999863 45566679999999999999963 299999999999999999999999999988654322 2233 4
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
+..|++||...+..|+.++||||||+.++|+++|+.|+..... ......+.+..+++..+...+.. ...+++.+++.
T Consensus 240 T~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~-~~~~~~~Ll~~Iv~~ppP~lP~~--~fS~ef~~FV~ 316 (364)
T KOG0581|consen 240 TSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNP-PYLDIFELLCAIVDEPPPRLPEG--EFSPEFRSFVS 316 (364)
T ss_pred cccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCC-CCCCHHHHHHHHhcCCCCCCCcc--cCCHHHHHHHH
Confidence 4457788999999999999999999999999999999875411 01112244556666442322222 35667888999
Q ss_pred hcCCCCCCCCCCHHHHHHH
Q 005177 683 LCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 683 ~Cl~~~p~~RPs~~evl~~ 701 (710)
.|+++||.+||++.|++++
T Consensus 317 ~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 317 CCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred HHhcCCcccCCCHHHHhcC
Confidence 9999999999999998764
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-43 Score=370.22 Aligned_cols=246 Identities=24% Similarity=0.368 Sum_probs=200.4
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
....||+|.||.|+.|.+.....||||.++.+....+.|.+|+++|++++|+|||+|+|+|..++.+|||||||++|+|.
T Consensus 210 l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl 289 (468)
T KOG0197|consen 210 LIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLL 289 (468)
T ss_pred HHHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHH
Confidence 56889999999999999977779999999988778889999999999999999999999999988999999999999999
Q ss_pred hhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--CC--cc
Q 005177 530 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SF--PA 601 (710)
Q Consensus 530 ~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--~~--~~ 601 (710)
++|+. .+..++-+.++.|||+||+||+++ ++|||||.++|||++++..+||+|||+||......- .. .-
T Consensus 290 ~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kf 366 (468)
T KOG0197|consen 290 DYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKF 366 (468)
T ss_pred HHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCC
Confidence 99985 456778899999999999999999 999999999999999999999999999995432211 11 11
Q ss_pred cccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHH
Q 005177 602 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 681 (710)
Q Consensus 602 ~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 681 (710)
.+.|+ +||.+...+++.|||||||||+||||+|-++.+..+....+ .+..+-....++.+.. ....+.+++
T Consensus 367 PIkWt-APEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e-----v~~~le~GyRlp~P~~---CP~~vY~lM 437 (468)
T KOG0197|consen 367 PIKWT-APEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE-----VLELLERGYRLPRPEG---CPDEVYELM 437 (468)
T ss_pred Cceec-CHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH-----HHHHHhccCcCCCCCC---CCHHHHHHH
Confidence 45555 56888888999999999999999999996554443333221 1222211111222222 234567899
Q ss_pred hhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 682 LLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 682 ~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
..||+.+|++|||++.+...|+++..
T Consensus 438 ~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 438 KSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred HHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 99999999999999999999887753
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-42 Score=345.23 Aligned_cols=191 Identities=24% Similarity=0.308 Sum_probs=169.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
....||+|+|++||||++ .+|..||||.+.+.. ...+.+..|+++|++++|||||+|++++++++.+|||||||.+
T Consensus 14 ~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~g 93 (429)
T KOG0595|consen 14 LSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNG 93 (429)
T ss_pred ehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCC
Confidence 566799999999999996 678999999998653 3466688999999999999999999999999999999999999
Q ss_pred CChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC------CceEEcccCccccccccCC
Q 005177 526 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN------MEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 526 gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~------~~~kl~DfGla~~~~~~~~ 597 (710)
|||.++++. .++..+...++.|+|.||++||+. +||||||||.||||+.. -.+||+|||+||..+...-
T Consensus 94 GDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~ 170 (429)
T KOG0595|consen 94 GDLSDYIRRRGRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSM 170 (429)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhH
Confidence 999999987 567888899999999999999999 99999999999999865 4589999999998864321
Q ss_pred -CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCC
Q 005177 598 -SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAG 643 (710)
Q Consensus 598 -~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~ 643 (710)
....+.++|++||+...++|+.|+|+||.|+|+|||++|+.||+..
T Consensus 171 a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 171 AETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred HHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 1233677899999999999999999999999999999999999743
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-42 Score=331.43 Aligned_cols=248 Identities=21% Similarity=0.311 Sum_probs=194.9
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
....+|+|+||.|||++. .+|+.||||++..+.. -.+...+||++|++++|||+|.|+.+|..+...+||+|||+.
T Consensus 6 ~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dh 85 (396)
T KOG0593|consen 6 KLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDH 85 (396)
T ss_pred hhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecch
Confidence 677899999999999996 6799999999986543 267789999999999999999999999999999999999997
Q ss_pred CChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCcc--
Q 005177 526 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPA-- 601 (710)
Q Consensus 526 gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~-- 601 (710)
.=|.++=+. ..+.....++++|+++|+.|+|++ ++|||||||+|||++.++.+|+||||+||.....+..++.
T Consensus 86 TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYV 162 (396)
T KOG0593|consen 86 TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYV 162 (396)
T ss_pred HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhh
Confidence 444433322 567778889999999999999999 9999999999999999999999999999987644333332
Q ss_pred cccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccc-cccccc-------cccccc------ccCC
Q 005177 602 KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP-IDGLLG-------EMYNEN------EVGS 666 (710)
Q Consensus 602 ~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~-~~~~~~-------~~~~~~------~~~~ 666 (710)
.+.||.+||..-+ .+|+..+||||.||++.||+||...|.+..+..... +...++ +++... .++.
T Consensus 163 ATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~ 242 (396)
T KOG0593|consen 163 ATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPE 242 (396)
T ss_pred hhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCC
Confidence 5779999998766 679999999999999999999998887665432211 110011 111111 0110
Q ss_pred ---Cc----chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 667 ---SS----SLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 667 ---~~----~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
.. ..+....-+++++..|++.||++|++.+|++.
T Consensus 243 ~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 243 PEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred CCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 11 12233446789999999999999999998774
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=340.44 Aligned_cols=244 Identities=17% Similarity=0.191 Sum_probs=196.8
Q ss_pred hhhhhcCCCCCccEEEE-cCCCcEEEEEEeeccch--------hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEE
Q 005177 450 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT--------RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~-~~~g~~vAvK~l~~~~~--------~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 520 (710)
..+.+|+|+||.|-+|. ..+|+.||||.+..... ......+|+++|++++|||||++++++..++..||||
T Consensus 176 i~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVl 255 (475)
T KOG0615|consen 176 ISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVL 255 (475)
T ss_pred eeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEE
Confidence 56789999999999997 47899999999986421 1234579999999999999999999999999999999
Q ss_pred eecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC---CceEEcccCcccccccc
Q 005177 521 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN---MEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 521 Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~---~~~kl~DfGla~~~~~~ 595 (710)
|||+||+|.+.+-. .+....-..+++|++.|+.|||+. +|+||||||+|||+..+ ..+||+|||+|+..+..
T Consensus 256 E~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~ 332 (475)
T KOG0615|consen 256 EYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEG 332 (475)
T ss_pred EEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecccchhhccccc
Confidence 99999999999854 445566688999999999999999 99999999999999866 78999999999987632
Q ss_pred CC-CCcccccccCchhhhhccC---CccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchH
Q 005177 596 DG-SFPAKIAWTESGEFYNAMK---EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 671 (710)
Q Consensus 596 ~~-~~~~~~~~~~~~e~~~~~~---~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (710)
.- ..-++++.|-+||+..+.. +..++|+||+|||||-+++|-.||.+....+. ...++...+....+..+.
T Consensus 333 sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s-----l~eQI~~G~y~f~p~~w~ 407 (475)
T KOG0615|consen 333 SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS-----LKEQILKGRYAFGPLQWD 407 (475)
T ss_pred eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc-----HHHHHhcCcccccChhhh
Confidence 11 1122555577788776443 33478999999999999999999985443221 123444444333456677
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 672 DEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 672 ~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+..+++++++.+++..||++|||+.|++++
T Consensus 408 ~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 408 RISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred hhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 888899999999999999999999999864
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-42 Score=326.87 Aligned_cols=242 Identities=17% Similarity=0.217 Sum_probs=193.9
Q ss_pred hhhhhcCCCCCccEEEE-cCCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEE-EEEcCCc-eeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLG-FCYNRHQ-AYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~-~~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g-~~~~~~~-~~lv~Ey~ 523 (710)
..+.||+|+||.|||+. +.+|..||.|.++-+ ....+....|+.+|++++|||||++++ -+.++.+ ++||||||
T Consensus 23 Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c 102 (375)
T KOG0591|consen 23 ILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELC 102 (375)
T ss_pred HHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhh
Confidence 88999999999999997 689999999999854 345677889999999999999999998 3444555 89999999
Q ss_pred CCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCC--ceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 524 PNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPA--IPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 524 ~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~--iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
..|||.+.++. ..+..+.+++..|+++||.++|.. .|+ |+||||||.||+|+.+|.+|++|||++|+....
T Consensus 103 ~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~-~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~ 181 (375)
T KOG0591|consen 103 DAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSK-IPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSK 181 (375)
T ss_pred cccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhcc-ccccceeeccCcchheEEcCCCceeeccchhHhHhcch
Confidence 99999999964 347788999999999999999993 346 999999999999999999999999999987643
Q ss_pred CCCC--cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcch-HH
Q 005177 596 DGSF--PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL-QD 672 (710)
Q Consensus 596 ~~~~--~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 672 (710)
.... -.+++||+.||.....+++.|+||||+||++|||..-+.||.+..-.. ....+.+. . . ++.+ .-
T Consensus 182 ~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~---L~~KI~qg---d-~--~~~p~~~ 252 (375)
T KOG0591|consen 182 TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLS---LCKKIEQG---D-Y--PPLPDEH 252 (375)
T ss_pred hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHH---HHHHHHcC---C-C--CCCcHHH
Confidence 3221 227888999999999999999999999999999999999998652111 00111111 1 1 1122 22
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 673 EIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
....+.+++..|++.||++||+.-..+..
T Consensus 253 YS~~l~~li~~ci~vd~~~RP~t~~~v~d 281 (375)
T KOG0591|consen 253 YSTDLRELINMCIAVDPEQRPDTVPYVQD 281 (375)
T ss_pred hhhHHHHHHHHHccCCcccCCCcchHHHH
Confidence 45667788889999999999985444433
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=351.40 Aligned_cols=242 Identities=19% Similarity=0.249 Sum_probs=201.1
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeec----cchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEW----GATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~----~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
.|. ....+|+|||..+|+++. .+|..||+|++.+ .....+...+||++.++++|||||++++||++.+.+|||
T Consensus 19 ~Y~--~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYiv 96 (592)
T KOG0575|consen 19 RYK--RGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIV 96 (592)
T ss_pred eee--eeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEE
Confidence 355 778999999999999996 8999999999987 344577788999999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC-
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD- 596 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~- 596 (710)
.|+|++|+|..+++. .+.+++...+..||+.||.|||+. +|||||||-.|++|++++++||+|||+|.......
T Consensus 97 LELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~E 173 (592)
T KOG0575|consen 97 LELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGE 173 (592)
T ss_pred EEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecCccc
Confidence 999999999999984 678899999999999999999999 99999999999999999999999999997765332
Q ss_pred -CCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHH
Q 005177 597 -GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 675 (710)
Q Consensus 597 -~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (710)
....++++.|-+||+......+..+||||+|||+|-|++|++||+... ..+....+....... +. ....
T Consensus 174 rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~------vkety~~Ik~~~Y~~-P~---~ls~ 243 (592)
T KOG0575|consen 174 RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT------VKETYNKIKLNEYSM-PS---HLSA 243 (592)
T ss_pred ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch------HHHHHHHHHhcCccc-cc---ccCH
Confidence 223347777889999998889999999999999999999999986332 111111221111111 11 2344
Q ss_pred HHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 676 LVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 676 ~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+.+++.+.++.+|.+|||+++|+..
T Consensus 244 ~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 244 EAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred HHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 56688889999999999999999863
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-40 Score=337.31 Aligned_cols=249 Identities=21% Similarity=0.308 Sum_probs=196.4
Q ss_pred cCCchhhhhhcCCCCCccEEEE-cCCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcC--CceeE
Q 005177 445 SFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYL 518 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~-~~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~l 518 (710)
.|. ..+.||+|.||.||||+ ..+|+.||+|+++.+.. ......+||.+|+++.|||||+|.+...++ +.+||
T Consensus 118 ~fe--ki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 118 SFE--KIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred HHH--HHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 355 77899999999999998 58999999999987542 255678999999999999999999998876 68999
Q ss_pred EEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 519 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
|+|||+. ||..++.. +.+.++...++.|++.||+|+|++ +|+|||||.+|||||.+|.+||+|||+|+++...
T Consensus 196 VFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~ 271 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYTPS 271 (560)
T ss_pred EEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeeccCC
Confidence 9999997 99998876 567889999999999999999999 9999999999999999999999999999987544
Q ss_pred CCC-Cc--ccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCC---------------cccccccc-
Q 005177 596 DGS-FP--AKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKPIDGLL- 655 (710)
Q Consensus 596 ~~~-~~--~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~---------------~~~~~~~~- 655 (710)
... .+ ..+-||.+||+..+ ..|+.++|+||.|||+.||++|+..+.+..... .|.....-
T Consensus 272 ~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~ 351 (560)
T KOG0600|consen 272 GSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPH 351 (560)
T ss_pred CCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCc
Confidence 322 22 24669999998764 579999999999999999999998877433221 22211110
Q ss_pred cccccccccCCCcchH----HHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 656 GEMYNENEVGSSSSLQ----DEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 656 ~~~~~~~~~~~~~~~~----~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
...+.+. ........ .....+++++...+..||++|.|+.++++
T Consensus 352 ~~~~kp~-~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 352 ATIFKPQ-QPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred ccccCCC-CcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 0111111 01111111 22346788999999999999999999875
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-40 Score=311.25 Aligned_cols=248 Identities=20% Similarity=0.269 Sum_probs=197.2
Q ss_pred hhhhhcCCCCCccEEEE-cCCCcEEEEEEeeccchh---HHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGATR---IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~-~~~g~~vAvK~l~~~~~~---~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.+|+|.||.||+|. ..+|+.||||+++.+... .....+||+.|+.++|||||.|+++|-+.+...||+|||+.
T Consensus 6 ~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~t 85 (318)
T KOG0659|consen 6 KLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMPT 85 (318)
T ss_pred hhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEeccc
Confidence 67889999999999998 488999999999986443 45678999999999999999999999999999999999985
Q ss_pred CChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCc--
Q 005177 526 GNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFP-- 600 (710)
Q Consensus 526 gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~-- 600 (710)
||+..++. .+.-.+...++.++.+|++|||.. .|+|||+||.|+|++++|.+||+|||+|+..........
T Consensus 86 -dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~ 161 (318)
T KOG0659|consen 86 -DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQ 161 (318)
T ss_pred -cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCCCcccccc
Confidence 99999987 356777889999999999999999 999999999999999999999999999998765443333
Q ss_pred ccccccCchhhhh-ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCC---------------ccccccccccccccccc
Q 005177 601 AKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKPIDGLLGEMYNENEV 664 (710)
Q Consensus 601 ~~~~~~~~~e~~~-~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~---------------~~~~~~~~~~~~~~~~~ 664 (710)
..+.||.+||... ...|+..+||||.|||+.||+-|.+-+.+..++. .|+....+.+..+-...
T Consensus 162 V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~ 241 (318)
T KOG0659|consen 162 VVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQF 241 (318)
T ss_pred eeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcC
Confidence 3567999999765 5679999999999999999999755454433332 23322111111111100
Q ss_pred C---CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 665 G---SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 665 ~---~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+ ....+.......++++..++..||.+|+|++|++++
T Consensus 242 P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 242 PKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred CCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 0 011223345567999999999999999999999875
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=394.60 Aligned_cols=304 Identities=31% Similarity=0.524 Sum_probs=168.7
Q ss_pred EEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCC
Q 005177 79 GINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFS 158 (710)
Q Consensus 79 ~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~ 158 (710)
.++++++.+.+.+|..++. +++|++|+|++|.+.+.+|..+.++++|++|+|++|.+++.+|..++++++|++|+|++
T Consensus 144 ~L~Ls~n~~~~~~p~~~~~--l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~ 221 (968)
T PLN00113 144 TLDLSNNMLSGEIPNDIGS--FSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGY 221 (968)
T ss_pred EEECcCCcccccCChHHhc--CCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcC
Confidence 3444444444444444444 55555555555555555555555555555555555555555555555555555555555
Q ss_pred CCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCC
Q 005177 159 NSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIP 238 (710)
Q Consensus 159 N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p 238 (710)
|.+++.+|..++++++|++|+|++|.+++.+|..++++++|++|++++|.+.+.+|..+..+++|+.|++++|.+.+.+|
T Consensus 222 n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p 301 (968)
T PLN00113 222 NNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIP 301 (968)
T ss_pred CccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCC
Confidence 55555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred ccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCcc------
Q 005177 239 WQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPES------ 312 (710)
Q Consensus 239 ~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~------ 312 (710)
..+.++++|+.|++++|.+++.+|..+..+++|+.|++++|.+.+.+|..+..+++|+.|++++|++++.+|.+
T Consensus 302 ~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~ 381 (968)
T PLN00113 302 ELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGN 381 (968)
T ss_pred hhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCC
Confidence 55555555555555555555555555555555555555555555555555555555555555555544444433
Q ss_pred ------------------ccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCC
Q 005177 313 ------------------FADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVST 374 (710)
Q Consensus 313 ------------------~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~ 374 (710)
++.+++|+.|++++|++++.+|..+..+++|+.|++++|.+++.+|..+..+++|+.|++++
T Consensus 382 L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 461 (968)
T PLN00113 382 LFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLAR 461 (968)
T ss_pred CCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcC
Confidence 33444444455555555545555555555555555555555555555555566666666666
Q ss_pred CcCCccCccc
Q 005177 375 NNFNGSIPPD 384 (710)
Q Consensus 375 N~l~g~ip~~ 384 (710)
|.+.|.+|..
T Consensus 462 n~~~~~~p~~ 471 (968)
T PLN00113 462 NKFFGGLPDS 471 (968)
T ss_pred ceeeeecCcc
Confidence 6666666654
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=361.96 Aligned_cols=245 Identities=22% Similarity=0.285 Sum_probs=197.8
Q ss_pred hhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
-.+.+|+|.||+||+|.. .+-..||||.++.... ..++|++|+++++.++|||||+|+|+|.+++..++|+|
T Consensus 490 ~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFE 569 (774)
T KOG1026|consen 490 FKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFE 569 (774)
T ss_pred ehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEE
Confidence 357899999999999984 3356899999997533 57899999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhc------------C----CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcc
Q 005177 522 YLPNGNLSEKIRT------------K----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 585 (710)
Q Consensus 522 y~~~gsL~~~l~~------------~----~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~D 585 (710)
||..|||.++|+. . ++-.+.+.||.|||.||+||-++ .+|||||.++|+|+.++..+||+|
T Consensus 570 Ym~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l~VKIsD 646 (774)
T KOG1026|consen 570 YMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENLVVKISD 646 (774)
T ss_pred ecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccceEEEecc
Confidence 9999999999964 1 45678899999999999999998 999999999999999999999999
Q ss_pred cCccccccccC-----CCCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccc
Q 005177 586 FGFKYLTQLAD-----GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMY 659 (710)
Q Consensus 586 fGla~~~~~~~-----~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 659 (710)
||++|..-..+ +.....+.|+ +||-+.+.++++++|||||||||||++| |+.|+.+-.+.+ .+..+.
T Consensus 647 fGLsRdiYssDYYk~~~~t~lPIRWM-ppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E------VIe~i~ 719 (774)
T KOG1026|consen 647 FGLSRDIYSSDYYKVRGNTLLPIRWM-PPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE------VIECIR 719 (774)
T ss_pred cccchhhhhhhhhcccCCceeeeecC-CHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH------HHHHHH
Confidence 99998542211 1222256654 6688888999999999999999999988 667776433211 122222
Q ss_pred cccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 660 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
+...+. .+.+...++.+++..||+.+|++||++.||-..|+....
T Consensus 720 ~g~lL~---~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~ 764 (774)
T KOG1026|consen 720 AGQLLS---CPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ 764 (774)
T ss_pred cCCccc---CCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence 222121 122344678899999999999999999999999987654
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-39 Score=337.91 Aligned_cols=246 Identities=20% Similarity=0.264 Sum_probs=190.9
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.||+|.||+||||.+ .| .||||.++.. ..+.+.|+.|+..+++-||.||+-++|||..+.. +||+.+|+|-
T Consensus 396 l~~rIGsGsFGtV~Rg~w-hG-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwCeGs 472 (678)
T KOG0193|consen 396 LGERIGSGSFGTVYRGRW-HG-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWCEGS 472 (678)
T ss_pred ccceeccccccceeeccc-cc-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhccCc
Confidence 567899999999999997 34 4999999874 3357889999999999999999999999998777 9999999999
Q ss_pred Chhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc----CCCC
Q 005177 527 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA----DGSF 599 (710)
Q Consensus 527 sL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~----~~~~ 599 (710)
+|+.+||. +.+..+...||.|||+||.|||.+ +|||||||+.||+|.+++.+||+|||++.+...- .-..
T Consensus 473 SLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~q 549 (678)
T KOG0193|consen 473 SLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQ 549 (678)
T ss_pred hhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccceeeeeeeccccccCC
Confidence 99999986 567778899999999999999999 9999999999999999999999999998653211 1112
Q ss_pred cc-cccccCchhhhh---ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHH
Q 005177 600 PA-KIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 675 (710)
Q Consensus 600 ~~-~~~~~~~~e~~~---~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (710)
+. .+. |.+||++. ..+++..+||||||||+|||+||..|+.... .....+. .-.....+. ......+..+
T Consensus 550 p~gsil-wmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~-~dqIifm-VGrG~l~pd---~s~~~s~~pk 623 (678)
T KOG0193|consen 550 PHGSLL-WMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQN-RDQIIFM-VGRGYLMPD---LSKIRSNCPK 623 (678)
T ss_pred Cccchh-hhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCC-hhheEEE-ecccccCcc---chhhhccCHH
Confidence 22 344 44556654 3468999999999999999999999997222 1111111 000100011 0111123345
Q ss_pred HHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 676 LVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 676 ~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
+|.+++..||..++++||.+.+++.+|+.+.+
T Consensus 624 ~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 624 AMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred HHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 77789999999999999999999998877654
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=331.95 Aligned_cols=248 Identities=18% Similarity=0.201 Sum_probs=192.9
Q ss_pred hhhhhcCCCCCccEEEE-cCCCcEEEEEEeeccchhHH--HHHHHHHHHhccC-CCCceeEEEEEEcCC-ceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGATRIK--IVSEFITRIGTVR-HKNLIRLLGFCYNRH-QAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~-~~~g~~vAvK~l~~~~~~~~--~~~~e~~~l~~l~-H~niv~l~g~~~~~~-~~~lv~Ey~~ 524 (710)
..+.+|.|.||.||+|+ ..+|..||||+++..-...+ .-.+|++.|+++. |||||+|.+++.+.+ .+|+|||||+
T Consensus 14 ~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md 93 (538)
T KOG0661|consen 14 VIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMD 93 (538)
T ss_pred HHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhh
Confidence 78899999999999998 57899999999986433323 3367899999999 999999999999988 9999999998
Q ss_pred CCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCc-
Q 005177 525 NGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFP- 600 (710)
Q Consensus 525 ~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~- 600 (710)
. +|+++++. ..+......|+.||.+||+|+|.+ |+.|||+||+|||+.....+||+|||+||.......-..
T Consensus 94 ~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYTeY 169 (538)
T KOG0661|consen 94 C-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYTEY 169 (538)
T ss_pred h-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccccccccccCCCcchh
Confidence 4 99999976 457888999999999999999999 999999999999999999999999999997754332221
Q ss_pred ccccccCchhhhh-ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc---------------cccccccccccccccc
Q 005177 601 AKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPIDGLLGEMYNENEV 664 (710)
Q Consensus 601 ~~~~~~~~~e~~~-~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~---------------~~~~~~~~~~~~~~~~ 664 (710)
..+.||++||+.. ...|+.++|+||+|||++|+.+-+..|.+.....+ |.....+...++-...
T Consensus 170 VSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P 249 (538)
T KOG0661|consen 170 VSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFP 249 (538)
T ss_pred hhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCC
Confidence 2678999998754 56789999999999999999998877775443211 1110000000000000
Q ss_pred -CCCc----chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 665 -GSSS----SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 665 -~~~~----~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..+. -......++++++.+|+++||.+|||+.|++++
T Consensus 250 ~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 250 QVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred cCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 0011 112245678899999999999999999999875
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=330.09 Aligned_cols=244 Identities=17% Similarity=0.220 Sum_probs=191.1
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchh----HHHHHHHHHHHhccCCCCceeEEEEEEc----CCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATR----IKIVSEFITRIGTVRHKNLIRLLGFCYN----RHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~----~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~~~lv~E 521 (710)
....+++|++|.||+|.. +|+.||||+++..... .+.+.+|++++.+++|||||+++|++.+ ....++|||
T Consensus 24 ~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~E 102 (283)
T PHA02988 24 TSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILE 102 (283)
T ss_pred CCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEE
Confidence 446789999999999998 7899999999864322 4667899999999999999999999977 346899999
Q ss_pred ecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC
Q 005177 522 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 599 (710)
Q Consensus 522 y~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 599 (710)
|+++|+|.++++. ..+|..+.+++.+++.|++|||+.. +++||||||+||++++++.+||+|||+++.........
T Consensus 103 y~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~ 180 (283)
T PHA02988 103 YCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKN 180 (283)
T ss_pred eCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhccccccc
Confidence 9999999999975 5689999999999999999999732 67899999999999999999999999988654322111
Q ss_pred cccccccCchhhhhc--cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccccc-ccCCCcchHHHHHH
Q 005177 600 PAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN-EVGSSSSLQDEIKL 676 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~--~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 676 (710)
. +...+.+||+... ..++.++|||||||++|||+||+.||.+..... ....+.... ....+. .....
T Consensus 181 ~-~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~------~~~~i~~~~~~~~~~~---~~~~~ 250 (283)
T PHA02988 181 V-NFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE------IYDLIINKNNSLKLPL---DCPLE 250 (283)
T ss_pred c-CcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhcCCCCCCCC---cCcHH
Confidence 2 2233667787754 578999999999999999999999987432111 011111110 011111 12345
Q ss_pred HHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 677 VLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 677 ~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
+.+++.+||+.||++||||+|+++.|+.++
T Consensus 251 l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 251 IKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred HHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 678899999999999999999999998764
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=333.40 Aligned_cols=242 Identities=16% Similarity=0.215 Sum_probs=201.0
Q ss_pred hhhhhcCCCCCccEEEE-cCCCcEEEEEEeeccchh-HHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGATR-IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~-~~~g~~vAvK~l~~~~~~-~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
....||+|..|.||.|. ..+++.||||++...... ++.+.+|+.+|+..+|+|||.+++-|..+++.+.|||||++|+
T Consensus 277 ~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggs 356 (550)
T KOG0578|consen 277 DFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGS 356 (550)
T ss_pred chhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCc
Confidence 77889999999999997 578999999999986544 5567899999999999999999999998999999999999999
Q ss_pred hhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--CCccccc
Q 005177 528 LSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAKIA 604 (710)
Q Consensus 528 L~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--~~~~~~~ 604 (710)
|.|.+.. .++..+...|+.+++.||+|||.. +|+|||||++|||++.++.+||+|||++........ ....+++
T Consensus 357 LTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGTP 433 (550)
T KOG0578|consen 357 LTDVVTKTRMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGTP 433 (550)
T ss_pred hhhhhhcccccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccccccCccccccCCC
Confidence 9999976 678999999999999999999999 999999999999999999999999999865543322 2223778
Q ss_pred ccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhc
Q 005177 605 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 684 (710)
Q Consensus 605 ~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 684 (710)
|+++||+.....|+.|+||||+|++++||+-|+.||..+..++..... ..-..+. ..........+.+++.+|
T Consensus 434 YWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLI---a~ng~P~----lk~~~klS~~~kdFL~~c 506 (550)
T KOG0578|consen 434 YWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI---ATNGTPK----LKNPEKLSPELKDFLDRC 506 (550)
T ss_pred CccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHH---hhcCCCC----cCCccccCHHHHHHHHHH
Confidence 888999999999999999999999999999999999865544321110 0100111 112233456677889999
Q ss_pred CCCCCCCCCCHHHHHHH
Q 005177 685 TRSTPSDRPSMEEALKL 701 (710)
Q Consensus 685 l~~~p~~RPs~~evl~~ 701 (710)
++.||++||++.|++++
T Consensus 507 L~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 507 LVVDVEQRASAKELLEH 523 (550)
T ss_pred hhcchhcCCCHHHHhcC
Confidence 99999999999999874
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=318.44 Aligned_cols=236 Identities=16% Similarity=0.156 Sum_probs=188.8
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
++|. ..++||+|+||+||.++. .+|+.+|+|.+++.. ...+....|..+|.+++||.||+++-.|++++..|+
T Consensus 25 ~dF~--~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 25 DDFE--ILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred hhee--eeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 4577 889999999999999974 789999999998743 235667889999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhcCC--CHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc-
Q 005177 519 LYDYLPNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA- 595 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~~~--~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~- 595 (710)
|+||+.||+|+-+|.+.. +..+...++.+|+.||.|||+. +||||||||+|||||++|+++++|||+++..-..
T Consensus 103 Vld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~ 179 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDG 179 (357)
T ss_pred EEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhcccCC
Confidence 999999999999998744 4555677889999999999999 9999999999999999999999999999854322
Q ss_pred -CCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 596 -DGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 596 -~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
.+..-.++..|++||+.....++..+|.||+||++|||++|.+||.+..... ....+........+.. ..
T Consensus 180 ~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~------~~~~I~~~k~~~~p~~---ls 250 (357)
T KOG0598|consen 180 DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKK------MYDKILKGKLPLPPGY---LS 250 (357)
T ss_pred CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHH------HHHHHhcCcCCCCCcc---CC
Confidence 2222235555788899998999999999999999999999999997543211 1111111110111111 23
Q ss_pred HHHHHHHhhcCCCCCCCCC
Q 005177 675 KLVLDVALLCTRSTPSDRP 693 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RP 693 (710)
..+.+++.+.+..||++|-
T Consensus 251 ~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 251 EEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred HHHHHHHHHHhccCHHHhc
Confidence 4567788889999999995
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-38 Score=327.76 Aligned_cols=237 Identities=23% Similarity=0.293 Sum_probs=187.3
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
+.+-+|.|+-|.||.|.+ .++.||||+++. .-..+|+-|++++|||||.+.|+|.....++||||||+.|-|.
T Consensus 128 ELeWlGSGaQGAVF~Grl-~netVAVKKV~e------lkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~ 200 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGRL-HNETVAVKKVRE------LKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLY 200 (904)
T ss_pred hhhhhccCcccceeeeec-cCceehhHHHhh------hhhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHH
Confidence 667899999999999998 667899999873 2245688899999999999999999999999999999999999
Q ss_pred hhhhcCC--CHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC--CCCcccccc
Q 005177 530 EKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--GSFPAKIAW 605 (710)
Q Consensus 530 ~~l~~~~--~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~--~~~~~~~~~ 605 (710)
.+|+... .-..-..+..|||.||.|||.+ .|||||||+-||||..+-.+||+|||-++...... -++.++++|
T Consensus 201 ~VLka~~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVaW 277 (904)
T KOG4721|consen 201 EVLKAGRPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVAW 277 (904)
T ss_pred HHHhccCccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHhh
Confidence 9998733 3444568899999999999999 99999999999999999999999999988764332 234456776
Q ss_pred cCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCC-CcccccccccccccccccCCCcchHHHHHHHHHHHhhc
Q 005177 606 TESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSL-QNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 684 (710)
Q Consensus 606 ~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 684 (710)
+ +||++...+.++|+||||||||||||+||..|+.+-... ..|-.-. ... .++.+...++ -+.-++.+|
T Consensus 278 M-APEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGs---NsL---~LpvPstcP~---GfklL~Kqc 347 (904)
T KOG4721|consen 278 M-APEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGS---NSL---HLPVPSTCPD---GFKLLLKQC 347 (904)
T ss_pred h-CHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccC---Ccc---cccCcccCch---HHHHHHHHH
Confidence 5 568888999999999999999999999999998742211 1111110 000 0112222333 233466789
Q ss_pred CCCCCCCCCCHHHHHHHHhccC
Q 005177 685 TRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 685 l~~~p~~RPs~~evl~~L~~~~ 706 (710)
|...|..||++++++.+|+=..
T Consensus 348 w~sKpRNRPSFrqil~HldIa~ 369 (904)
T KOG4721|consen 348 WNSKPRNRPSFRQILLHLDIAS 369 (904)
T ss_pred HhcCCCCCccHHHHHHHHhhcC
Confidence 9999999999999999986443
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-38 Score=336.45 Aligned_cols=247 Identities=20% Similarity=0.240 Sum_probs=188.8
Q ss_pred hhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccc--hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcC-CceeEE
Q 005177 450 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNR-HQAYLL 519 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~-~~~~lv 519 (710)
..+.||+|+||.||+|.. .++..||||+++... ...+.+.+|++++.++ +|||||+++|+|... +..++|
T Consensus 11 ~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv 90 (338)
T cd05102 11 LGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVI 90 (338)
T ss_pred eeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEE
Confidence 668899999999999963 346789999997543 2346688999999999 899999999998764 468999
Q ss_pred EeecCCCChhhhhhc----------------------------------------------------------------C
Q 005177 520 YDYLPNGNLSEKIRT----------------------------------------------------------------K 535 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~----------------------------------------------------------------~ 535 (710)
|||+++|+|.+++.. .
T Consensus 91 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (338)
T cd05102 91 VEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSP 170 (338)
T ss_pred EecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCC
Confidence 999999999998863 1
Q ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC----CcccccccCchhh
Q 005177 536 RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS----FPAKIAWTESGEF 611 (710)
Q Consensus 536 ~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~----~~~~~~~~~~~e~ 611 (710)
+++.+..+++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ .......|.+||.
T Consensus 171 l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~ 247 (338)
T cd05102 171 LTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPES 247 (338)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHH
Confidence 45677788999999999999998 9999999999999999999999999999754321111 1111223667788
Q ss_pred hhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCC
Q 005177 612 YNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPS 690 (710)
Q Consensus 612 ~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~ 690 (710)
.....++.++|||||||++|||+| |+.|+.+...... . ...+.+......+ ......+.+++.+||+.||+
T Consensus 248 ~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~--~---~~~~~~~~~~~~~---~~~~~~l~~li~~cl~~dp~ 319 (338)
T cd05102 248 IFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE--F---CQRLKDGTRMRAP---ENATPEIYRIMLACWQGDPK 319 (338)
T ss_pred hhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH--H---HHHHhcCCCCCCC---CCCCHHHHHHHHHHccCChh
Confidence 777788999999999999999997 8888764321110 0 0111111101111 11234577899999999999
Q ss_pred CCCCHHHHHHHHhccCC
Q 005177 691 DRPSMEEALKLLSGLKP 707 (710)
Q Consensus 691 ~RPs~~evl~~L~~~~~ 707 (710)
+|||+.|+++.|+++..
T Consensus 320 ~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 320 ERPTFSALVEILGDLLQ 336 (338)
T ss_pred hCcCHHHHHHHHHHHHh
Confidence 99999999999987653
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=323.71 Aligned_cols=243 Identities=20% Similarity=0.220 Sum_probs=187.9
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-hHHHHHHHHHHHhccCCCCceeEEEEEEcCC--ceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRH--QAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~--~~~lv~Ey~~~ 525 (710)
..+.+|+|.||.||.+.. .+|...|||.+..... ..+.+.+|+++|.+++|||||+++|...... .+++.|||+++
T Consensus 21 ~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~ 100 (313)
T KOG0198|consen 21 KGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPG 100 (313)
T ss_pred hhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCC
Confidence 568899999999999996 4599999999986522 2566899999999999999999999865554 69999999999
Q ss_pred CChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC-CCceEEcccCccccccc--c---C
Q 005177 526 GNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-NMEPHLAEFGFKYLTQL--A---D 596 (710)
Q Consensus 526 gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~-~~~~kl~DfGla~~~~~--~---~ 596 (710)
|+|.+++.. .++.+...+++.||++||+|||++ +||||||||+|||++. ++.+||+|||+++.... . .
T Consensus 101 GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~ 177 (313)
T KOG0198|consen 101 GSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDS 177 (313)
T ss_pred CcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCccccccccccccccc
Confidence 999999986 368889999999999999999998 9999999999999999 79999999999886652 1 1
Q ss_pred CCCcccccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHH
Q 005177 597 GSFPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 675 (710)
Q Consensus 597 ~~~~~~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (710)
.....+++++++||+.... ....++||||+||++.||+||++|+.+......+........ ..| ..+.....
T Consensus 178 ~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~-~~P------~ip~~ls~ 250 (313)
T KOG0198|consen 178 ELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRED-SLP------EIPDSLSD 250 (313)
T ss_pred cccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccC-CCC------CCCcccCH
Confidence 1112245557777877642 233489999999999999999999875311111111111111 011 11122344
Q ss_pred HHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 005177 676 LVLDVALLCTRSTPSDRPSMEEALKLL 702 (710)
Q Consensus 676 ~~~~l~~~Cl~~~p~~RPs~~evl~~L 702 (710)
...+++.+|++.+|++|||++|++++-
T Consensus 251 ~a~~Fl~~C~~~~p~~Rpta~eLL~hp 277 (313)
T KOG0198|consen 251 EAKDFLRKCFKRDPEKRPTAEELLEHP 277 (313)
T ss_pred HHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence 567888899999999999999998764
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-38 Score=334.93 Aligned_cols=243 Identities=21% Similarity=0.285 Sum_probs=192.2
Q ss_pred hhhcCCCCCccEEEEcC--CC--cE-EEEEEeecc----chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 452 EEAARPQSAAGCKAVLP--TG--IT-VSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~~--~g--~~-vAvK~l~~~----~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
+.+|+|+||.||+|.+. ++ .. ||||..+.. ..+.++|.+|.++|++++|||||+++|++..+..+|+|||+
T Consensus 163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl 242 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMEL 242 (474)
T ss_pred ceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEe
Confidence 78999999999999863 23 23 899999852 34578899999999999999999999999999999999999
Q ss_pred cCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--
Q 005177 523 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-- 597 (710)
Q Consensus 523 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-- 597 (710)
|+||+|.++|+. .++..++.+++.++|+||+|||+. ++|||||-++|+|++.++.+||+|||+++.-.....
T Consensus 243 ~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~ 319 (474)
T KOG0194|consen 243 CNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKK 319 (474)
T ss_pred cCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCccccccCCcceeecc
Confidence 999999999987 378999999999999999999999 999999999999999999999999999876431111
Q ss_pred -CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccc-ccccccCCCcchHHHH
Q 005177 598 -SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEM-YNENEVGSSSSLQDEI 674 (710)
Q Consensus 598 -~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 674 (710)
.....+.|. +||...+..++.++|||||||++||+++ |..|+.+.... +...++ .+......+...+.
T Consensus 320 ~~~klPirWL-APEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~------~v~~kI~~~~~r~~~~~~~p~-- 390 (474)
T KOG0194|consen 320 FLKKLPIRWL-APETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY------EVKAKIVKNGYRMPIPSKTPK-- 390 (474)
T ss_pred ccccCcceec-ChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH------HHHHHHHhcCccCCCCCCCHH--
Confidence 112245554 5788888899999999999999999999 66676543321 111222 11111122222233
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
.+..++.+||..+|++||+|.++.+.++.+..
T Consensus 391 -~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~ 422 (474)
T KOG0194|consen 391 -ELAKVMKQCWKKDPEDRPTMSTIKKKLEALEK 422 (474)
T ss_pred -HHHHHHHHhccCChhhccCHHHHHHHHHHHHh
Confidence 44566669999999999999999999987753
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-38 Score=325.49 Aligned_cols=242 Identities=19% Similarity=0.226 Sum_probs=194.4
Q ss_pred cCCchhhhhhcCCCCCccEEEE-cCCCcEEEEEEeecc----chhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeE
Q 005177 445 SFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWG----ATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~-~~~g~~vAvK~l~~~----~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 518 (710)
+|. -.+++|+|+|++||+|+ ..+++.+|||++.+. ....+....|-..|.++ .||.||+|+--|+++..+|+
T Consensus 74 DF~--Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF 151 (604)
T KOG0592|consen 74 DFK--FGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF 151 (604)
T ss_pred hcc--hhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence 366 66899999999999998 478999999999864 22356677788888888 79999999999999999999
Q ss_pred EEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC
Q 005177 519 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 596 (710)
|+||++||+|.++|+. .++......++.+|..||+|||+. +||||||||+|||||+||++||+|||-|+++....
T Consensus 152 vLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~ 228 (604)
T KOG0592|consen 152 VLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQ 228 (604)
T ss_pred EEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccccCChhh
Confidence 9999999999999987 446666778999999999999999 99999999999999999999999999998764221
Q ss_pred CC-----------C----cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccc
Q 005177 597 GS-----------F----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNE 661 (710)
Q Consensus 597 ~~-----------~----~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 661 (710)
.. . -.+++.|-+||++.....+..+|+|+||||+|.|++|++||.++... .. +.++++-
T Consensus 229 ~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney---li---FqkI~~l 302 (604)
T KOG0592|consen 229 KSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY---LI---FQKIQAL 302 (604)
T ss_pred ccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH---HH---HHHHHHh
Confidence 11 1 11456677889999999999999999999999999999999865432 11 2222222
Q ss_pred cccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 662 NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
. ...++.++ +.+.+|+.+.+..||.+|+|.+|+-++
T Consensus 303 ~-y~fp~~fp---~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 303 D-YEFPEGFP---EDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred c-ccCCCCCC---HHHHHHHHHHHccCccccccHHHHhhC
Confidence 2 11122222 456678888999999999999887654
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=351.03 Aligned_cols=246 Identities=20% Similarity=0.301 Sum_probs=194.0
Q ss_pred hhhhhcCCCCCccEEEEc--CCCc----EEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVL--PTGI----TVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~--~~g~----~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
....||+|.||.||+|.. ..|. .||||.++.. .....+|.+|..+|++++|||||+++|+|.+....+|++|
T Consensus 696 l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~le 775 (1025)
T KOG1095|consen 696 LLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLE 775 (1025)
T ss_pred eeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEeh
Confidence 446799999999999986 3343 5999999875 3457889999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhcC---------CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccc
Q 005177 522 YLPNGNLSEKIRTK---------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 592 (710)
Q Consensus 522 y~~~gsL~~~l~~~---------~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~ 592 (710)
||++|||..+|++. +...+-+.++.|||+|+.||++. ++|||||.++|+||++...+||+|||+||..
T Consensus 776 yM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDFGlArDi 852 (1025)
T KOG1095|consen 776 YMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADFGLARDI 852 (1025)
T ss_pred hcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEcccchhHhh
Confidence 99999999999863 45677789999999999999999 9999999999999999999999999999943
Q ss_pred ccc-----CCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCC
Q 005177 593 QLA-----DGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSS 667 (710)
Q Consensus 593 ~~~-----~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (710)
... .+.....+.|+ +||....+.++.|+|||||||++||++|.+.+++.+....+. +..+.....+..+
T Consensus 853 y~~~yyr~~~~a~lPvkWm-~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v-----~~~~~~ggRL~~P 926 (1025)
T KOG1095|consen 853 YDKDYYRKHGEAMLPVKWM-PPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV-----LLDVLEGGRLDPP 926 (1025)
T ss_pred hhchheeccCccccceecC-CHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH-----HHHHHhCCccCCC
Confidence 211 11111245554 668888889999999999999999999976555444332211 1111111112223
Q ss_pred cchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 668 SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 668 ~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
+..+ ..+.+++.+||+.+|++||++..+++++..+..
T Consensus 927 ~~CP---~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~ 963 (1025)
T KOG1095|consen 927 SYCP---EKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISN 963 (1025)
T ss_pred CCCC---hHHHHHHHHHccCChhhCccHHHHHhhhhhhhh
Confidence 3333 356689999999999999999999998877643
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-37 Score=311.74 Aligned_cols=247 Identities=20% Similarity=0.235 Sum_probs=191.3
Q ss_pred cCCchhhhhhcCCCCCccEEEE-cCCCcEEEEEEeeccchh--HHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 445 SFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGATR--IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~-~~~g~~vAvK~l~~~~~~--~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
+|. ..++||.|..+.||+|. .+.+..||||++...... .+.+.+|+..++.++|||||+++..|..+.++|+||.
T Consensus 27 ~Ye--L~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 27 DYE--LQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred cee--EEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 355 67899999999999998 588999999999875443 5788999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 522 YLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 522 y~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
||.+||+.+.++. .++......|..++.+||.|||++ +-||||||+.|||||++|.+||+|||..-.....+.
T Consensus 105 fMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~ 181 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD 181 (516)
T ss_pred hhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeecccCc
Confidence 9999999999976 456677788999999999999999 999999999999999999999999998543321111
Q ss_pred ------CCcccccccCchhhhh--ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccccccc--C--
Q 005177 598 ------SFPAKIAWTESGEFYN--AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV--G-- 665 (710)
Q Consensus 598 ------~~~~~~~~~~~~e~~~--~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~-- 665 (710)
....+++++.+||+.. -..|+.|+||||||+...||.+|..||..-.... ..+..+-+..+. .
T Consensus 182 R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmk-----vLl~tLqn~pp~~~t~~ 256 (516)
T KOG0582|consen 182 RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMK-----VLLLTLQNDPPTLLTSG 256 (516)
T ss_pred eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHH-----HHHHHhcCCCCCccccc
Confidence 1112445556667633 3469999999999999999999999986322211 011111111100 0
Q ss_pred -CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 666 -SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 666 -~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
...........+.+++-.|++.||++|||++++++.
T Consensus 257 ~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 257 LDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred CChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 001111233467888999999999999999998764
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-37 Score=323.29 Aligned_cols=249 Identities=19% Similarity=0.207 Sum_probs=185.4
Q ss_pred hhhhhcCCCCCccEEEEcC-----------------CCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEE
Q 005177 450 ECEEAARPQSAAGCKAVLP-----------------TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFC 510 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~-----------------~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~ 510 (710)
..+.||+|+||.||++... ++..||||.+.... ...+.+.+|++++.+++|||||+++|++
T Consensus 9 ~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 88 (304)
T cd05096 9 FKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVC 88 (304)
T ss_pred eeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEEEE
Confidence 5678999999999999742 34479999997642 2356788999999999999999999999
Q ss_pred EcCCceeEEEeecCCCChhhhhhc---------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCC
Q 005177 511 YNRHQAYLLYDYLPNGNLSEKIRT---------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLK 569 (710)
Q Consensus 511 ~~~~~~~lv~Ey~~~gsL~~~l~~---------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk 569 (710)
.+.+..++||||+++|+|.+++.. ..+|....+++.|+++||+|||+. +|+|||||
T Consensus 89 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~ivH~dlk 165 (304)
T cd05096 89 VDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFVHRDLA 165 (304)
T ss_pred ecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---CccccCcc
Confidence 999999999999999999998853 246778899999999999999998 99999999
Q ss_pred CCCeEecCCCceEEcccCccccccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHhC--CCCCCCC
Q 005177 570 ASNIVFDENMEPHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTN--GRLTNAG 643 (710)
Q Consensus 570 ~~NiLl~~~~~~kl~DfGla~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg--~~p~~~~ 643 (710)
|+||+++.++.+||+|||+++........ .......|.+||+.....++.++|||||||++|||+++ ..|+...
T Consensus 166 p~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~ 245 (304)
T cd05096 166 TRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGEL 245 (304)
T ss_pred hhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcC
Confidence 99999999999999999998754321111 11112235677887777889999999999999999975 4455432
Q ss_pred CCCCcccc-cccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhc
Q 005177 644 SSLQNKPI-DGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 704 (710)
Q Consensus 644 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~ 704 (710)
........ ...............++ .....+.+++.+||+.||++||||.||.+.|++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 246 TDEQVIENAGEFFRDQGRQVYLFRPP---PCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CHHHHHHHHHHHhhhccccccccCCC---CCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 11100000 00000000000000011 122457789999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=302.30 Aligned_cols=253 Identities=19% Similarity=0.219 Sum_probs=191.5
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchh---HHHHHHHHHHHhccCCCCceeEEEEEEc--CCce
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATR---IKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQA 516 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~ 516 (710)
.+.|. ..+.|++|.||.||+|+. .+++.||+|+++..... .-.-.+||.+|.+++|||||.+-.+... -+.+
T Consensus 75 v~efe--~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~i 152 (419)
T KOG0663|consen 75 VEEFE--KLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKI 152 (419)
T ss_pred HHHHH--HHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccccee
Confidence 34466 889999999999999986 77899999999875422 1234678999999999999999888765 3579
Q ss_pred eEEEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccc
Q 005177 517 YLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 517 ~lv~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~ 593 (710)
|||||||+. ||..++.. .....+..-++.|+.+|++|||+. .|+|||||++|+|+...|..||+|||+||.+.
T Consensus 153 y~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 153 YIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYG 228 (419)
T ss_pred eeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhc
Confidence 999999997 88888865 445677888999999999999999 99999999999999999999999999999887
Q ss_pred ccCCCCcc--cccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc---------------ccccccc
Q 005177 594 LADGSFPA--KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPIDGLL 655 (710)
Q Consensus 594 ~~~~~~~~--~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~---------------~~~~~~~ 655 (710)
......+. .+-||.+||+..+ ..|++.+|+||+|||+.||+++++.+.+...+.+ |+-...+
T Consensus 229 sp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~l 308 (419)
T KOG0663|consen 229 SPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSEL 308 (419)
T ss_pred CCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcccc
Confidence 55333322 5678999987654 5689999999999999999998877775443321 1111000
Q ss_pred ccc--ccccccCC---CcchHH--HHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 656 GEM--YNENEVGS---SSSLQD--EIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 656 ~~~--~~~~~~~~---~~~~~~--~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..+ +.-...+. ...+.. ......+++...+..||.+|.|++|.+++
T Consensus 309 p~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 309 PAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred chhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 000 00000000 000111 22567788889999999999999998763
|
|
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=311.61 Aligned_cols=242 Identities=20% Similarity=0.256 Sum_probs=191.8
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.||+|+||.||++...++..+|+|.++......+.+.+|++++++++||||++++++|.+++..++||||+++|+|.
T Consensus 8 ~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~ 87 (256)
T cd05114 8 FMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLL 87 (256)
T ss_pred EeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHH
Confidence 55779999999999999888889999998866555677889999999999999999999999999999999999999999
Q ss_pred hhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC---cccc
Q 005177 530 EKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---PAKI 603 (710)
Q Consensus 530 ~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~---~~~~ 603 (710)
++++. ..+|..+..++.|++.||+|||+. +|+||||||+||++++++.+|++|||.++......... ....
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~ 164 (256)
T cd05114 88 NYLRQRQGKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFP 164 (256)
T ss_pred HHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCCCc
Confidence 99864 468999999999999999999998 99999999999999999999999999887543211111 1111
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
..+.+||......++.++|||||||++|||+| |+.|+........ ...+........+.. ....+.+++.
T Consensus 165 ~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~------~~~i~~~~~~~~~~~---~~~~~~~li~ 235 (256)
T cd05114 165 VKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEV------VEMISRGFRLYRPKL---ASMTVYEVMY 235 (256)
T ss_pred hhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHH------HHHHHCCCCCCCCCC---CCHHHHHHHH
Confidence 23667888777788899999999999999999 7777753321110 011111110110111 1245789999
Q ss_pred hcCCCCCCCCCCHHHHHHHHh
Q 005177 683 LCTRSTPSDRPSMEEALKLLS 703 (710)
Q Consensus 683 ~Cl~~~p~~RPs~~evl~~L~ 703 (710)
+||+.+|++||+|.|+++.|.
T Consensus 236 ~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 236 SCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred HHccCCcccCcCHHHHHHhhC
Confidence 999999999999999998873
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=309.66 Aligned_cols=248 Identities=21% Similarity=0.293 Sum_probs=191.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeec---cchhHHHHHHHHHHHhccCCCCceeEEEEEEc-----CCceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEW---GATRIKIVSEFITRIGTVRHKNLIRLLGFCYN-----RHQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~---~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-----~~~~~lv~ 520 (710)
..+.+|+|+||.|+++.. .+|+.||||++.. .....+...+|+++|+.++|+|||.+.+.+.. -..+|+|+
T Consensus 26 ~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~ 105 (359)
T KOG0660|consen 26 LIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVF 105 (359)
T ss_pred ccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEeh
Confidence 468899999999999985 7899999999984 23446778899999999999999999999876 24789999
Q ss_pred eecCCCChhhhhhcC--CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc--C
Q 005177 521 DYLPNGNLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA--D 596 (710)
Q Consensus 521 Ey~~~gsL~~~l~~~--~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~--~ 596 (710)
|+|+ .||.+.++.. +.......+++|+.+||.|+|+. +|+|||+||+|++++.+...||+|||+||..... .
T Consensus 106 elMe-tDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~ 181 (359)
T KOG0660|consen 106 ELME-TDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFED 181 (359)
T ss_pred hHHh-hHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccceeeccccCcc
Confidence 9995 5999999874 56677788999999999999999 9999999999999999999999999999987532 1
Q ss_pred CCCc--ccccccCchhhhh-ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc---------ccc--------cc
Q 005177 597 GSFP--AKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI---------DGL--------LG 656 (710)
Q Consensus 597 ~~~~--~~~~~~~~~e~~~-~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~---------~~~--------~~ 656 (710)
+..+ ..+.||.+||+.. ...|+..+||||.|||+.||++|+..|.+.....+... .+. ..
T Consensus 182 ~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar 261 (359)
T KOG0660|consen 182 GFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKAR 261 (359)
T ss_pred cchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHH
Confidence 1111 1567899998765 56789999999999999999999888775543321110 000 00
Q ss_pred ccccccccCCCcc----hHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 657 EMYNENEVGSSSS----LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 657 ~~~~~~~~~~~~~----~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..+...+...... ++...+.+++++.+++..||.+|+|++|++++
T Consensus 262 ~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 262 PYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 1111100001111 12233578899999999999999999999874
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-36 Score=300.04 Aligned_cols=252 Identities=21% Similarity=0.253 Sum_probs=194.6
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCC-ceeEEEEEEcCC------ceeE
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKN-LIRLLGFCYNRH------QAYL 518 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~n-iv~l~g~~~~~~------~~~l 518 (710)
..+.+|+|.||.||||+. .+|+.||+|+++.... ......+|+.++++++|+| ||+|++++.+.. ..++
T Consensus 15 ~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~l 94 (323)
T KOG0594|consen 15 KVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYL 94 (323)
T ss_pred HHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEE
Confidence 678899999999999984 7899999999987543 2455688999999999999 999999998877 7899
Q ss_pred EEeecCCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccc
Q 005177 519 LYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 592 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~ 592 (710)
||||++. +|.+++.. ..+-.....++.|+.+||+|||++ +|+||||||.|||++++|..||+|||+|+..
T Consensus 95 vfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~ 170 (323)
T KOG0594|consen 95 VFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGLARAF 170 (323)
T ss_pred EEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccchHHHh
Confidence 9999985 99998865 244456789999999999999999 9999999999999999999999999999976
Q ss_pred cccCCCCcc--cccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCCCCCCC---------------Cccccccc
Q 005177 593 QLADGSFPA--KIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSL---------------QNKPIDGL 654 (710)
Q Consensus 593 ~~~~~~~~~--~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~~~---------------~~~~~~~~ 654 (710)
.......+. .+-||.+||+..+. .|+..+||||+|||+.||++++..|.+..+. ..|+-...
T Consensus 171 ~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~ 250 (323)
T KOG0594|consen 171 SIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSS 250 (323)
T ss_pred cCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccc
Confidence 643333322 56789999987654 6899999999999999999987777644322 22332211
Q ss_pred ccccccccccCC-Ccc----hHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH--Hhcc
Q 005177 655 LGEMYNENEVGS-SSS----LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL--LSGL 705 (710)
Q Consensus 655 ~~~~~~~~~~~~-~~~----~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~--L~~~ 705 (710)
..+...+-+... +.. .+.......+++.+|++.+|.+|.|++.++++ +..+
T Consensus 251 ~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 251 LPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred cccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 111100000000 111 11122468899999999999999999999986 5554
|
|
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=327.24 Aligned_cols=247 Identities=19% Similarity=0.229 Sum_probs=189.3
Q ss_pred cCCchhhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccc--hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCc
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQ 515 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~ 515 (710)
+|. ..+.||+|+||.||+|.. .++..||||+++... ...+.+.+|++++..+ +|||||+++|+|.+++.
T Consensus 36 ~~~--~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 36 RLS--FGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred Hee--hhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 355 778999999999999962 346789999997532 2355688899999999 89999999999999999
Q ss_pred eeEEEeecCCCChhhhhhc-------------------------------------------------------------
Q 005177 516 AYLLYDYLPNGNLSEKIRT------------------------------------------------------------- 534 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~------------------------------------------------------------- 534 (710)
.++|||||++|+|.++++.
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 9999999999999998853
Q ss_pred ----------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC
Q 005177 535 ----------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 598 (710)
Q Consensus 535 ----------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 598 (710)
.++|....+++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 246778889999999999999998 9999999999999999999999999998754322111
Q ss_pred C----cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccccccc-ccCCCcchHH
Q 005177 599 F----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNEN-EVGSSSSLQD 672 (710)
Q Consensus 599 ~----~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 672 (710)
. ......+.+||......++.++|||||||++|||+| |..|+........ ..+..... ....+..
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~------~~~~~~~~~~~~~~~~--- 341 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSK------FYKMIKEGYRMLSPEC--- 341 (375)
T ss_pred cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHH------HHHHHHhCccCCCCCC---
Confidence 1 111122567788877788999999999999999998 6666653221110 00111110 0000111
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 673 EIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
...++.+++.+||+.||++||+|.|++++|++.
T Consensus 342 ~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 342 APSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 124577899999999999999999999999753
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=320.85 Aligned_cols=237 Identities=16% Similarity=0.187 Sum_probs=196.8
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.||+|.||.||||+- .+++.||+|.+.+... ..+.+.+|++++++++|||||.+++.|+...+.++|.||+.+
T Consensus 6 v~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g 85 (808)
T KOG0597|consen 6 VYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG 85 (808)
T ss_pred HHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh
Confidence 678999999999999985 6789999999987433 356689999999999999999999999999999999999986
Q ss_pred CChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Ccc
Q 005177 526 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPA 601 (710)
Q Consensus 526 gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~ 601 (710)
+|..+|.. .++......|++++..||.|||+. +|+|||+||.|||++..+.+|+||||+||.......- ...
T Consensus 86 -~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsik 161 (808)
T KOG0597|consen 86 -DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIK 161 (808)
T ss_pred -hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhcccCceeeeecc
Confidence 99999976 678889999999999999999999 9999999999999999999999999999987543221 122
Q ss_pred cccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHH
Q 005177 602 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 681 (710)
Q Consensus 602 ~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 681 (710)
+++.|++||.+...+++..+|.||+|||+||+++|++||....-. .....+.... ...+. .....+..++
T Consensus 162 GtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~------~Lv~~I~~d~-v~~p~---~~S~~f~nfl 231 (808)
T KOG0597|consen 162 GTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSIT------QLVKSILKDP-VKPPS---TASSSFVNFL 231 (808)
T ss_pred CcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHH------HHHHHHhcCC-CCCcc---cccHHHHHHH
Confidence 677789999999999999999999999999999999998743311 1222232222 22122 3445667777
Q ss_pred hhcCCCCCCCCCCHHHHHH
Q 005177 682 LLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 682 ~~Cl~~~p~~RPs~~evl~ 700 (710)
...+.+||.+|.|-.+++.
T Consensus 232 ~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 232 QGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred HHHhhcChhhcccHHHHhc
Confidence 8889999999999888764
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-38 Score=334.97 Aligned_cols=245 Identities=20% Similarity=0.284 Sum_probs=198.7
Q ss_pred hhhhhcCCCCCccEEEEcC----CCcEEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~----~g~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
+.++||.|.||.||+|.++ ....||||.++.+ ..++.+|..|..+|+++.|||||+|-|+.......+||.|||
T Consensus 633 Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyM 712 (996)
T KOG0196|consen 633 IEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYM 712 (996)
T ss_pred EEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhh
Confidence 5679999999999999872 3468999999986 345788999999999999999999999999999999999999
Q ss_pred CCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC-C
Q 005177 524 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-F 599 (710)
Q Consensus 524 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~-~ 599 (710)
+||+|+.+|+. +..|.+...+..|||.||.||-+. +.|||||.+.|||++.+..+||+|||++|........ .
T Consensus 713 ENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~y 789 (996)
T KOG0196|consen 713 ENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAY 789 (996)
T ss_pred hCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceeecccCCCccc
Confidence 99999999986 456788889999999999999998 9999999999999999999999999999987543322 1
Q ss_pred cc-----cccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 600 PA-----KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 600 ~~-----~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
.+ .+. +++||.+...+++.++||||||||+||.++ |.+|+-+-. ..+.+..+-+...++.+ .+.
T Consensus 790 tt~GGKIPiR-WTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmS------NQdVIkaIe~gyRLPpP---mDC 859 (996)
T KOG0196|consen 790 TTLGGKIPIR-WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS------NQDVIKAIEQGYRLPPP---MDC 859 (996)
T ss_pred cccCCcccee-ecChhHhhhcccCchhhccccceEEEEecccCCCcccccc------hHHHHHHHHhccCCCCC---CCC
Confidence 11 244 456688888899999999999999999866 777764221 11222222222222222 234
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
...+.++++.||++|-.+||++.|++.+|.++-+
T Consensus 860 P~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 860 PAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred cHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence 4567789999999999999999999999987743
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=321.03 Aligned_cols=239 Identities=20% Similarity=0.198 Sum_probs=192.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc----c--hhHHHHHHHHHHHhccC-CCCceeEEEEEEcCCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG----A--TRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~----~--~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~E 521 (710)
....+|+|.||+||.|.. .+|..||||.+... . ...+.+.+|+.++++++ ||||++++.++......|+|||
T Consensus 21 ~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmE 100 (370)
T KOG0583|consen 21 LGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVME 100 (370)
T ss_pred eeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEE
Confidence 678899999999999974 67899999977653 1 12455678999999999 9999999999999999999999
Q ss_pred ecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC-CceEEcccCcccccc-c-cC
Q 005177 522 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-MEPHLAEFGFKYLTQ-L-AD 596 (710)
Q Consensus 522 y~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~-~~~kl~DfGla~~~~-~-~~ 596 (710)
|+.+|+|++++.. .+......+++.|++.|++|+|+. +|+||||||+|||+|.+ +++||+|||++.... . ..
T Consensus 101 y~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~ 177 (370)
T KOG0583|consen 101 YCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDGL 177 (370)
T ss_pred ecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEeccccccccCCCCCc
Confidence 9999999999976 456777889999999999999999 99999999999999999 999999999998773 2 11
Q ss_pred CCCcccccccCchhhhhccC-C-ccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 597 GSFPAKIAWTESGEFYNAMK-E-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 597 ~~~~~~~~~~~~~e~~~~~~-~-~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
.....+.+.|++||++.+.. | +.++||||+||+||.|++|+.||++..... ....+.... ...+.... .
T Consensus 178 l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~------l~~ki~~~~-~~~p~~~~--S 248 (370)
T KOG0583|consen 178 LKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPN------LYRKIRKGE-FKIPSYLL--S 248 (370)
T ss_pred ccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHH------HHHHHhcCC-ccCCCCcC--C
Confidence 22333666688999988766 6 477999999999999999999998632111 111111111 11111111 4
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
.++.+++.+|+..+|.+|+|+.|++.
T Consensus 249 ~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 249 PEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred HHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 66788999999999999999999983
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=316.28 Aligned_cols=243 Identities=14% Similarity=0.121 Sum_probs=189.4
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||++.. .+|+.||||.+..... ....+.+|++++.+++|+||+++++++.+.+..++||||++
T Consensus 4 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~ 83 (285)
T cd05631 4 HYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMN 83 (285)
T ss_pred EEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecC
Confidence 567899999999999985 6899999999875321 23457789999999999999999999999999999999999
Q ss_pred CCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-CC
Q 005177 525 NGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SF 599 (710)
Q Consensus 525 ~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-~~ 599 (710)
+|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++....... ..
T Consensus 84 ~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05631 84 GGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRG 160 (285)
T ss_pred CCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecC
Confidence 9999988753 467888999999999999999998 999999999999999999999999999876432211 11
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 679 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (710)
..+...|++||+.....++.++|||||||++|||++|+.||......... ........... ...+ ......+.+
T Consensus 161 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~--~~~~~~~~~~~-~~~~---~~~s~~~~~ 234 (285)
T cd05631 161 RVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKR--EEVDRRVKEDQ-EEYS---EKFSEDAKS 234 (285)
T ss_pred CCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhH--HHHHHHhhccc-ccCC---ccCCHHHHH
Confidence 12344577889888888999999999999999999999998754321100 00000111110 0001 112345678
Q ss_pred HHhhcCCCCCCCCCC-----HHHHHHH
Q 005177 680 VALLCTRSTPSDRPS-----MEEALKL 701 (710)
Q Consensus 680 l~~~Cl~~~p~~RPs-----~~evl~~ 701 (710)
++.+|++.||++||+ ++|+++.
T Consensus 235 li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 235 ICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred HHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 899999999999997 7888763
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=309.14 Aligned_cols=244 Identities=20% Similarity=0.227 Sum_probs=183.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCC-----ceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH-----QAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-----~~~lv~Ey~ 523 (710)
..+++|+|+||.||+|+. .+++.||||++..+. +.-.+|+++|+++.|||||+|.-+|.... ...+|||||
T Consensus 28 ~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~---r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleym 104 (364)
T KOG0658|consen 28 AVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK---RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYM 104 (364)
T ss_pred eeEEEeecccceEEEEEEcCCCceeEEEEecCCC---CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhc
Confidence 778999999999999986 568999999997543 23357899999999999999999886532 346899999
Q ss_pred CCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC-CceEEcccCccccccccC
Q 005177 524 PNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-MEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 524 ~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~-~~~kl~DfGla~~~~~~~ 596 (710)
|. +|.+.++. .++.-...-+..|+.+||+|||+. +|+||||||.|+|+|.+ |.+||||||-|+......
T Consensus 105 P~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~e 180 (364)
T KOG0658|consen 105 PE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGE 180 (364)
T ss_pred hH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcceeeccCC
Confidence 96 99999873 344555677899999999999997 99999999999999965 999999999999875433
Q ss_pred CCCcc-cccccCchhhhh-ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc-c--------cccccc-------
Q 005177 597 GSFPA-KIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-D--------GLLGEM------- 658 (710)
Q Consensus 597 ~~~~~-~~~~~~~~e~~~-~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~-~--------~~~~~~------- 658 (710)
...+. ...||++||... ...|+.+.||||.|||+.||+-|+..|.++....+... . +.+..+
T Consensus 181 pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~ 260 (364)
T KOG0658|consen 181 PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEF 260 (364)
T ss_pred CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccc
Confidence 33222 456788888654 56799999999999999999999888876443221110 0 000000
Q ss_pred ccccccCCCc----chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 659 YNENEVGSSS----SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 659 ~~~~~~~~~~----~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..+. ....+ .......+.++++.++++.+|.+|.++.|++.+
T Consensus 261 ~~p~-ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 261 KFPQ-IKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred cCcc-cccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 0000 00000 111233568899999999999999999998754
|
|
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=327.33 Aligned_cols=248 Identities=16% Similarity=0.217 Sum_probs=190.0
Q ss_pred cCCchhhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccc--hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCc
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQ 515 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~ 515 (710)
+|. ..+.||+|+||.||+|+. .++..||||+++... .....+.+|+++++++ +|||||+++|+|.+.+.
T Consensus 39 ~~~--~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 39 NLQ--FGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred Hce--ehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 355 778999999999999873 234689999997532 2345688899999999 89999999999999999
Q ss_pred eeEEEeecCCCChhhhhhc-------------------------------------------------------------
Q 005177 516 AYLLYDYLPNGNLSEKIRT------------------------------------------------------------- 534 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~------------------------------------------------------------- 534 (710)
.++||||+++|+|.++++.
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 9999999999999998843
Q ss_pred -----------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC----
Q 005177 535 -----------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---- 599 (710)
Q Consensus 535 -----------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~---- 599 (710)
.+++.+..+|+.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++.........
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~ 273 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGN 273 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccC
Confidence 246677889999999999999998 99999999999999999999999999987543211110
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 678 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (710)
......|.+||+.....++.++|||||||++|||++ |+.|+........ ........... ..+.. ....+.
T Consensus 274 ~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~--~~~~~~~~~~~---~~~~~---~~~~l~ 345 (374)
T cd05106 274 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK--FYKMVKRGYQM---SRPDF---APPEIY 345 (374)
T ss_pred CCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH--HHHHHHcccCc---cCCCC---CCHHHH
Confidence 111123567788777788999999999999999997 8888764321110 00000000000 00111 124577
Q ss_pred HHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 679 DVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 679 ~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
+++.+||+.||++|||+.|++++|+++
T Consensus 346 ~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 346 SIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 888999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=320.03 Aligned_cols=234 Identities=15% Similarity=0.104 Sum_probs=184.4
Q ss_pred hcCCCCCccEEEEc-CCCcEEEEEEeecc----chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCCh
Q 005177 454 AARPQSAAGCKAVL-PTGITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 454 ig~g~~g~vy~~~~-~~g~~vAvK~l~~~----~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
||+|+||.||+|.. .+++.||+|.++.. ......+.+|++++.+++|||||++++++.+++..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 68999999999986 56889999999753 22345677899999999999999999999999999999999999999
Q ss_pred hhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Cccccc
Q 005177 529 SEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAKIA 604 (710)
Q Consensus 529 ~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~~~~ 604 (710)
.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ ...++.
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 157 (312)
T cd05585 81 FHHLQREGRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTP 157 (312)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCc
Confidence 999865 467888999999999999999998 9999999999999999999999999998754221111 112344
Q ss_pred ccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhc
Q 005177 605 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 684 (710)
Q Consensus 605 ~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 684 (710)
.|.+||......++.++|||||||++|||+||+.||.+..... ....+.... ...+. .....+.+++.+|
T Consensus 158 ~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~------~~~~~~~~~-~~~~~---~~~~~~~~li~~~ 227 (312)
T cd05585 158 EYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNE------MYRKILQEP-LRFPD---GFDRDAKDLLIGL 227 (312)
T ss_pred ccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHH------HHHHHHcCC-CCCCC---cCCHHHHHHHHHH
Confidence 5778898888888999999999999999999999987432111 111111111 11111 1224567888999
Q ss_pred CCCCCCCCCC---HHHHHH
Q 005177 685 TRSTPSDRPS---MEEALK 700 (710)
Q Consensus 685 l~~~p~~RPs---~~evl~ 700 (710)
++.||++||+ +.|+++
T Consensus 228 L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 228 LSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred cCCCHHHcCCCCCHHHHHc
Confidence 9999999985 556554
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-36 Score=310.02 Aligned_cols=244 Identities=16% Similarity=0.217 Sum_probs=190.5
Q ss_pred hhhhhcCCCCCccEEEEc----CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVL----PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~----~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
..+.||+|+||.||+|.. ..+..||+|.++... ...+.+.+|+..+.+++||||++++|++..++..++||||+
T Consensus 9 ~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 88 (266)
T cd05064 9 IERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYM 88 (266)
T ss_pred EeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeC
Confidence 667899999999999975 346799999998643 23567889999999999999999999999999999999999
Q ss_pred CCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--
Q 005177 524 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 598 (710)
Q Consensus 524 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~-- 598 (710)
++|+|.+++.. .++|.+...++.|++.||+|||+. +++||||||+||+++.++.+|++|||.+.........
T Consensus 89 ~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 165 (266)
T cd05064 89 SNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTT 165 (266)
T ss_pred CCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCcccccccccchhcc
Confidence 99999999865 468999999999999999999998 9999999999999999999999999986543211100
Q ss_pred -CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHH
Q 005177 599 -FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 676 (710)
Q Consensus 599 -~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (710)
.......+.+||......++.++|||||||++||+++ |+.|+.+..... ....+.+......+ ......
T Consensus 166 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~------~~~~~~~~~~~~~~---~~~~~~ 236 (266)
T cd05064 166 MSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD------VIKAVEDGFRLPAP---RNCPNL 236 (266)
T ss_pred cCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH------HHHHHHCCCCCCCC---CCCCHH
Confidence 1112233667888888889999999999999999775 888876432110 00111111101111 122345
Q ss_pred HHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 677 VLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 677 ~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
+.+++.+||+.+|++||+++|+.+.|+++
T Consensus 237 ~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 237 LHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred HHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 67889999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-36 Score=308.11 Aligned_cols=244 Identities=18% Similarity=0.268 Sum_probs=194.2
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.+|+|++|.||+|...++..||+|.+.......+.+.+|+.++++++||||+++++++.+.+..++||||+++|+|.
T Consensus 10 ~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 89 (261)
T cd05072 10 LVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLL 89 (261)
T ss_pred EeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHH
Confidence 66889999999999999888889999998865556678899999999999999999999999999999999999999999
Q ss_pred hhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC---ccc
Q 005177 530 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---PAK 602 (710)
Q Consensus 530 ~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~---~~~ 602 (710)
++++. ..++.++..++.|+++||+|||+. +++||||||+||+++.++.+|++|||+++......... ...
T Consensus 90 ~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 166 (261)
T cd05072 90 DFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKF 166 (261)
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCCceeccCCCcc
Confidence 99864 457889999999999999999998 99999999999999999999999999987653221111 111
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHH
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 681 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 681 (710)
...+.+||+.....++.++|||||||++|||+| |+.|+....... .... ...... ..... .....+.+++
T Consensus 167 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~--~~~~-~~~~~~---~~~~~---~~~~~~~~li 237 (261)
T cd05072 167 PIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD--VMSA-LQRGYR---MPRME---NCPDELYDIM 237 (261)
T ss_pred ceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH--HHHH-HHcCCC---CCCCC---CCCHHHHHHH
Confidence 223667788777778889999999999999999 888875322110 0000 001000 00011 1224577899
Q ss_pred hhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 682 LLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 682 ~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
.+|+..+|++||+++++.+.|+++
T Consensus 238 ~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 238 KTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred HHHccCCcccCcCHHHHHHHHhcC
Confidence 999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-36 Score=308.55 Aligned_cols=244 Identities=21% Similarity=0.254 Sum_probs=193.8
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCCh
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
..+.+|+|++|.||+|.. .+++.||+|.++......+.+.+|++.+.+++||||++++++|..++..++||||+++|+|
T Consensus 10 ~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 89 (263)
T cd05052 10 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 89 (263)
T ss_pred EeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcH
Confidence 567899999999999986 5688999999987655667889999999999999999999999999999999999999999
Q ss_pred hhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCc---c
Q 005177 529 SEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFP---A 601 (710)
Q Consensus 529 ~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~---~ 601 (710)
.+++.. .+++..+..++.|+++||+|||+. +++||||||+||++++++.+||+|||+++.......... .
T Consensus 90 ~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~ 166 (263)
T cd05052 90 LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 166 (263)
T ss_pred HHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccccceeeccCCCC
Confidence 999864 468899999999999999999998 999999999999999999999999999876542211111 1
Q ss_pred cccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHH
Q 005177 602 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 680 (710)
Q Consensus 602 ~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 680 (710)
....+.+||+.....++.++|||||||++|||+| |..|+.+... .... .......... .+. .....+.++
T Consensus 167 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-~~~~--~~~~~~~~~~---~~~---~~~~~~~~l 237 (263)
T cd05052 167 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVY--ELLEKGYRME---RPE---GCPPKVYEL 237 (263)
T ss_pred CccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-HHHH--HHHHCCCCCC---CCC---CCCHHHHHH
Confidence 1123667888877888999999999999999998 7777753221 1100 0011100000 011 123457789
Q ss_pred HhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 681 ALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 681 ~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
+.+|++.+|++||+|.|++++|+.+
T Consensus 238 i~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 238 MRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHHHccCCcccCCCHHHHHHHHHhh
Confidence 9999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=321.99 Aligned_cols=236 Identities=13% Similarity=0.072 Sum_probs=186.9
Q ss_pred hhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 453 EAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
.||+|+||.||++.. .+|+.||||.++... .....+.+|++++++++||||+++++++..++..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~ 81 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCc
Confidence 589999999999985 679999999998532 234567789999999999999999999999999999999999999
Q ss_pred hhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Ccccc
Q 005177 528 LSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAKI 603 (710)
Q Consensus 528 L~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~~~ 603 (710)
|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........ ...+.
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt 158 (323)
T cd05571 82 LFFHLSRERVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT 158 (323)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecC
Confidence 9999865 467888899999999999999998 9999999999999999999999999998753211111 11244
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 683 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 683 (710)
..|.+||......++.++||||+||++|||+||+.||....... ....+.... ...+. .....+.+++.+
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~------~~~~~~~~~-~~~p~---~~~~~~~~li~~ 228 (323)
T cd05571 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK------LFELILMEE-IRFPR---TLSPEAKSLLAG 228 (323)
T ss_pred ccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHH------HHHHHHcCC-CCCCC---CCCHHHHHHHHH
Confidence 55778898888888999999999999999999999986432110 001111111 11111 123456788899
Q ss_pred cCCCCCCCCC-----CHHHHHHH
Q 005177 684 CTRSTPSDRP-----SMEEALKL 701 (710)
Q Consensus 684 Cl~~~p~~RP-----s~~evl~~ 701 (710)
|++.||++|| ++.|++++
T Consensus 229 ~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 229 LLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred HccCCHHHcCCCCCCCHHHHHcC
Confidence 9999999999 78888753
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-36 Score=307.94 Aligned_cols=244 Identities=20% Similarity=0.224 Sum_probs=195.1
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.+|+|++|.||+|...+++.||||.++......+.+.+|++++++++||||+++++++...+..++||||+++|+|.
T Consensus 10 ~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 89 (261)
T cd05068 10 LLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLL 89 (261)
T ss_pred eEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcHH
Confidence 56889999999999999878889999999876556677899999999999999999999999999999999999999999
Q ss_pred hhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCccc---
Q 005177 530 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK--- 602 (710)
Q Consensus 530 ~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~--- 602 (710)
+++.. ..+|.....++.|++.|+.|||+. +|+||||||+||++++++.+||+|||+++...........+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 166 (261)
T cd05068 90 EYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKF 166 (261)
T ss_pred HHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCcC
Confidence 99864 468999999999999999999998 99999999999999999999999999987654221111111
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHH
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 681 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 681 (710)
...+.+||+.....++.++|||||||++|||+| |+.|+.+..... .. ..+........+ ......+.+++
T Consensus 167 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~----~~~~~~~~~~~~---~~~~~~~~~li 237 (261)
T cd05068 167 PIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE--VL----QQVDQGYRMPCP---PGCPKELYDIM 237 (261)
T ss_pred ceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH--HH----HHHHcCCCCCCC---CcCCHHHHHHH
Confidence 123667888777788999999999999999999 777775322111 00 011000000101 12235678899
Q ss_pred hhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 682 LLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 682 ~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
.+|++.+|++||+|.++++.|+++
T Consensus 238 ~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 238 LDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred HHHhhcCcccCCCHHHHHHHHhcC
Confidence 999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-37 Score=313.62 Aligned_cols=239 Identities=23% Similarity=0.365 Sum_probs=180.6
Q ss_pred hhhhcCCCCCccEEEEcC-----CCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeec
Q 005177 451 CEEAARPQSAAGCKAVLP-----TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 451 ~~~ig~g~~g~vy~~~~~-----~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
.+.||.|.||.||+|... .+..||||.++... ...+.+.+|++.+++++||||++++|+|...+..++||||+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~ 83 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC 83 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 467999999999999875 36789999996532 23678999999999999999999999999888899999999
Q ss_pred CCCChhhhhhcC----CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC---
Q 005177 524 PNGNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--- 596 (710)
Q Consensus 524 ~~gsL~~~l~~~----~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~--- 596 (710)
++|+|.++|+.. .++.++.+|+.|+|+||+|||+. +|+|+||+++||++++++.+||+|||+++......
T Consensus 84 ~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~ 160 (259)
T PF07714_consen 84 PGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYK 160 (259)
T ss_dssp TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEE
T ss_pred ccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccc
Confidence 999999999764 68999999999999999999998 99999999999999999999999999987652111
Q ss_pred --CCCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 597 --GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 597 --~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
........ +.+||......++.++||||||+++|||+| |+.|+.+. .... ....+.+......+. ..
T Consensus 161 ~~~~~~~~~~-~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~-~~~~-----~~~~~~~~~~~~~~~---~~ 230 (259)
T PF07714_consen 161 NDSSQQLPLR-YLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY-DNEE-----IIEKLKQGQRLPIPD---NC 230 (259)
T ss_dssp ESTTSESGGG-GS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS-CHHH-----HHHHHHTTEETTSBT---TS
T ss_pred cccccccccc-ccccccccccccccccccccccccccccccccccccccc-cccc-----ccccccccccceecc---ch
Confidence 11112334 457788877778999999999999999999 56665432 1111 111111111111111 12
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALKLL 702 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~~L 702 (710)
...+.+++.+||+.+|++||+|+|+++.|
T Consensus 231 ~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 231 PKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp BHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred hHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 24566889999999999999999999876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-36 Score=318.73 Aligned_cols=193 Identities=17% Similarity=0.211 Sum_probs=165.0
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
.|. ..+.||+|+||.||++.. .+|..||+|.+.... ...+.+.+|++++++++|||||++++++..++..++|||
T Consensus 6 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 6 DFE--RISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cce--EEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 355 678899999999999985 578999999997642 235678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC
Q 005177 522 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 599 (710)
Q Consensus 522 y~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 599 (710)
|+++|+|.+++.. ..++.....++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 161 (331)
T cd06649 84 HMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 161 (331)
T ss_pred cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccccccccc
Confidence 9999999999975 4678888999999999999999752 69999999999999999999999999987553222222
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCC
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTN 641 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~ 641 (710)
..+...|.+||+..+..++.++|||||||++|||+||+.|+.
T Consensus 162 ~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~ 203 (331)
T cd06649 162 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIP 203 (331)
T ss_pred CCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 223445778898888889999999999999999999999986
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=304.80 Aligned_cols=241 Identities=20% Similarity=0.233 Sum_probs=190.9
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.+|+|++|.||+|...++..+|+|.+.........+.+|++++++++||||+++++++.+.+..++||||+++++|.
T Consensus 8 ~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 87 (256)
T cd05059 8 FLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLL 87 (256)
T ss_pred hhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHH
Confidence 67889999999999999877789999998765555667888999999999999999999999999999999999999999
Q ss_pred hhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCcc---cc
Q 005177 530 EKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPA---KI 603 (710)
Q Consensus 530 ~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~---~~ 603 (710)
++++. ..+|.....++.|++.|++|||+. +|+||||||+||++++++.+|++|||+++........... ..
T Consensus 88 ~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 164 (256)
T cd05059 88 NYLRERKGKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFP 164 (256)
T ss_pred HHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecccccccccCCCCCC
Confidence 99864 458899999999999999999998 9999999999999999999999999998754321111111 11
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
..+.+||......++.++|||||||++|||+| |+.|+......... . ......... . +. .....+.+++.
T Consensus 165 ~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~--~-~~~~~~~~~-~--~~---~~~~~~~~li~ 235 (256)
T cd05059 165 VKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVV--E-SVSAGYRLY-R--PK---LAPTEVYTIMY 235 (256)
T ss_pred ccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHH--H-HHHcCCcCC-C--CC---CCCHHHHHHHH
Confidence 13667888877888999999999999999999 67776532211100 0 000000000 0 11 12346778999
Q ss_pred hcCCCCCCCCCCHHHHHHHH
Q 005177 683 LCTRSTPSDRPSMEEALKLL 702 (710)
Q Consensus 683 ~Cl~~~p~~RPs~~evl~~L 702 (710)
+|+..+|++||||.|+++.|
T Consensus 236 ~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 236 SCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HHhcCChhhCcCHHHHHHHh
Confidence 99999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-36 Score=320.57 Aligned_cols=246 Identities=15% Similarity=0.095 Sum_probs=192.1
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|++++.+++||||+++++++.+++..|+||||++
T Consensus 5 ~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~ 84 (333)
T cd05600 5 ILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVP 84 (333)
T ss_pred EEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCC
Confidence 678899999999999986 468999999998642 234567889999999999999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCccc
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK 602 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~ 602 (710)
+|+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ....+
T Consensus 85 g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~-~~~~g 160 (333)
T cd05600 85 GGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYA-NSVVG 160 (333)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccccc-CCccc
Confidence 9999999975 467888899999999999999998 99999999999999999999999999987654321 11223
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
...|.+||+.....++.++|||||||++|||++|+.|+........+............. .. ..........+.+++.
T Consensus 161 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~-~~-~~~~~~~s~~~~~li~ 238 (333)
T cd05600 161 SPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRP-VY-DDPRFNLSDEAWDLIT 238 (333)
T ss_pred CccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCC-CC-CccccccCHHHHHHHH
Confidence 445778898888889999999999999999999999987433211100000000111100 00 0000122356778889
Q ss_pred hcCCCCCCCCCCHHHHHHH
Q 005177 683 LCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 683 ~Cl~~~p~~RPs~~evl~~ 701 (710)
+|+..+|++||+++|++++
T Consensus 239 ~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 239 KLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred HHhhChhhhcCCHHHHHhC
Confidence 9999999999999999865
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=304.69 Aligned_cols=242 Identities=17% Similarity=0.216 Sum_probs=191.4
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.+|+|++|.||+|...++..||||.++........+.+|++++.+++||||++++++|.+.+..++||||+++|+|.
T Consensus 8 ~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~ 87 (256)
T cd05113 8 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLL 87 (256)
T ss_pred EeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHH
Confidence 55789999999999998777778999999865555677899999999999999999999999989999999999999999
Q ss_pred hhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC---cccc
Q 005177 530 EKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---PAKI 603 (710)
Q Consensus 530 ~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~---~~~~ 603 (710)
+++.. ..++.++.+++.|++.||+|||+. +|+|+||||+||++++++.+||+|||.++......... ....
T Consensus 88 ~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~ 164 (256)
T cd05113 88 NYLREHGKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFP 164 (256)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCccC
Confidence 99864 468999999999999999999998 99999999999999999999999999987543211111 1112
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
..+.+||......++.++|||||||++|||+| |+.|+....... ....+.......... .....+.+++.
T Consensus 165 ~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~li~ 235 (256)
T cd05113 165 VRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE------TVEKVSQGLRLYRPH---LASEKVYAIMY 235 (256)
T ss_pred hhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH------HHHHHhcCCCCCCCC---CCCHHHHHHHH
Confidence 23667888877778899999999999999999 888875322110 000111111000011 12356788999
Q ss_pred hcCCCCCCCCCCHHHHHHHHh
Q 005177 683 LCTRSTPSDRPSMEEALKLLS 703 (710)
Q Consensus 683 ~Cl~~~p~~RPs~~evl~~L~ 703 (710)
+||+.+|++||++.++++.|+
T Consensus 236 ~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 236 SCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred HHcCCCcccCCCHHHHHHhhC
Confidence 999999999999999998774
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-37 Score=319.39 Aligned_cols=243 Identities=23% Similarity=0.325 Sum_probs=192.9
Q ss_pred hhhhhcCCCCCccEEEEcC-CCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCCh
Q 005177 450 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
-.+.+|-|.||.||.|++. -.-.||||.++.+....++|.+|..+|+.++|||+|+|+|+|..+..+|||+|||.+|+|
T Consensus 271 MkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNL 350 (1157)
T KOG4278|consen 271 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNL 350 (1157)
T ss_pred eeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccH
Confidence 5678999999999999974 456899999999988999999999999999999999999999999999999999999999
Q ss_pred hhhhhcC----CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-CCcc--
Q 005177 529 SEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SFPA-- 601 (710)
Q Consensus 529 ~~~l~~~----~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-~~~~-- 601 (710)
.++|++. +.--..+.+|.||+.||+||..+ .+|||||.+.|+|+.++..+||+|||+++++....- ...+
T Consensus 351 LdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAK 427 (1157)
T KOG4278|consen 351 LDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAK 427 (1157)
T ss_pred HHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCcc
Confidence 9999862 23333468899999999999998 999999999999999999999999999998754321 1111
Q ss_pred -cccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHH
Q 005177 602 -KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 679 (710)
Q Consensus 602 -~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (710)
.+.|+ +||-+....++.|+|||+|||+|||+.| |..|+.+ .++.. ..+.+..-+. +..+ ..+.+.+.+
T Consensus 428 FPIKWT-APEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPG-idlSq--VY~LLEkgyR---M~~P---eGCPpkVYe 497 (1157)
T KOG4278|consen 428 FPIKWT-APESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQ--VYGLLEKGYR---MDGP---EGCPPKVYE 497 (1157)
T ss_pred Cccccc-CcccccccccccchhhHHHHHHHHHHHhcCCCCCCC-ccHHH--HHHHHhcccc---ccCC---CCCCHHHHH
Confidence 45555 4465566788999999999999999988 4555543 22110 0011111110 1111 123457889
Q ss_pred HHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 680 VALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 680 l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
++..||+++|.+||++.|+-+.++.+
T Consensus 498 LMraCW~WsPsDRPsFaeiHqafEtm 523 (1157)
T KOG4278|consen 498 LMRACWNWSPSDRPSFAEIHQAFETM 523 (1157)
T ss_pred HHHHHhcCCcccCccHHHHHHHHHHH
Confidence 99999999999999999999988876
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=316.64 Aligned_cols=238 Identities=15% Similarity=0.126 Sum_probs=189.6
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|.. .+|+.||||.+.... ...+.+.+|++++++++||||+++++++.+++..++||||++
T Consensus 5 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 84 (291)
T cd05612 5 RIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVP 84 (291)
T ss_pred eeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCC
Confidence 668899999999999986 578999999997532 234568889999999999999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCccc
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK 602 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~ 602 (710)
+|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........ ..+
T Consensus 85 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~-~~g 160 (291)
T cd05612 85 GGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWT-LCG 160 (291)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccCCccc-ccC
Confidence 9999999865 457888889999999999999998 9999999999999999999999999998765432211 123
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
...|.+||......++.++|||||||++|||+||+.|+....... ....+.... ...+.. ....+.+++.
T Consensus 161 t~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~------~~~~i~~~~-~~~~~~---~~~~~~~li~ 230 (291)
T cd05612 161 TPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG------IYEKILAGK-LEFPRH---LDLYAKDLIK 230 (291)
T ss_pred ChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCC-cCCCcc---CCHHHHHHHH
Confidence 444778898888888999999999999999999999986433211 011111111 111111 1245678999
Q ss_pred hcCCCCCCCCCC-----HHHHHHH
Q 005177 683 LCTRSTPSDRPS-----MEEALKL 701 (710)
Q Consensus 683 ~Cl~~~p~~RPs-----~~evl~~ 701 (710)
+|++.||.+||+ ++|++++
T Consensus 231 ~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 231 KLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred HHcCCCHHHccCCccCCHHHHhcC
Confidence 999999999995 8887764
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=314.60 Aligned_cols=247 Identities=17% Similarity=0.247 Sum_probs=189.9
Q ss_pred CCchhhhhhcCCCCCccEEEEc-CCCc----EEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 446 FNSTECEEAARPQSAAGCKAVL-PTGI----TVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 446 ~~~~~~~~ig~g~~g~vy~~~~-~~g~----~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
|. ..+.||+|+||.||+|+. .+|. .||||.++.. ....+.+.+|+.+++.++||||++++|+|... ..++
T Consensus 9 f~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 9 FK--KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred ce--eeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 55 788999999999999985 3444 4899998753 23456788999999999999999999999864 5789
Q ss_pred EEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 519 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
|+||+++|+|.++++. ..++...++++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 86 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 162 (316)
T cd05108 86 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAD 162 (316)
T ss_pred eeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEccccccccccCC
Confidence 9999999999999975 367888999999999999999998 9999999999999999999999999999865432
Q ss_pred CCCCc----ccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcch
Q 005177 596 DGSFP----AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 670 (710)
Q Consensus 596 ~~~~~----~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (710)
..... .....|.+||+.....++.++|||||||++|||+| |+.|+.+..... ....... ......++
T Consensus 163 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~---~~~~~~~---~~~~~~~~-- 234 (316)
T cd05108 163 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEK---GERLPQPP-- 234 (316)
T ss_pred CcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHhC---CCCCCCCC--
Confidence 21111 11223567788777788999999999999999998 888875422111 0000000 00011111
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 671 QDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 671 ~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
.....+.+++.+||+.+|++||++.+++..+..+..
T Consensus 235 -~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 235 -ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred -CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 122456789999999999999999999999877654
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=284.72 Aligned_cols=243 Identities=16% Similarity=0.215 Sum_probs=196.3
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchh----HHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATR----IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~----~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
++|+ ....+|+|.||.||.|.. .++-.||+|++.+++.. .+++.+|+++-+.++||||.+++|||.+....||
T Consensus 22 ~dfe--igr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL 99 (281)
T KOG0580|consen 22 DDFE--IGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL 99 (281)
T ss_pred hhcc--ccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence 4477 889999999999999985 67889999999875432 5778999999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccc
Q 005177 519 LYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 594 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~ 594 (710)
++||.+.|+++..|.. ..+......++.|+|.|+.|+|.. +||||||||+|+|++.++..|++|||-+-....
T Consensus 100 ilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~ 176 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 176 (281)
T ss_pred EEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeecCC
Confidence 9999999999999983 346667789999999999999998 999999999999999999999999998755432
Q ss_pred cCCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 595 ADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 595 ~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
.....-+++.-|-+||...+...+.++|+|++||+.||++.|..||..... ... ..++..-. ...+. ...
T Consensus 177 ~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~--~et----YkrI~k~~-~~~p~---~is 246 (281)
T KOG0580|consen 177 NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH--SET----YKRIRKVD-LKFPS---TIS 246 (281)
T ss_pred CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh--HHH----HHHHHHcc-ccCCc---ccC
Confidence 222223344447788999999999999999999999999999999974431 111 11111111 11111 123
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..+.+++.+|+..+|.+|.+..||++.
T Consensus 247 ~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 247 GGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred hhHHHHHHHHhccCccccccHHHHhhh
Confidence 456789999999999999999999875
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-36 Score=319.41 Aligned_cols=238 Identities=12% Similarity=0.105 Sum_probs=189.4
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|.. .+|+.||||.+.... ...+.+.+|++++.+++|||||++++++.+++..++||||++
T Consensus 22 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 101 (329)
T PTZ00263 22 MGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVV 101 (329)
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCC
Confidence 678899999999999986 578999999997542 234568889999999999999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCccc
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK 602 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~ 602 (710)
+|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........ ..+
T Consensus 102 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~-~~g 177 (329)
T PTZ00263 102 GGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFT-LCG 177 (329)
T ss_pred CChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCCCcce-ecC
Confidence 9999999875 457777888999999999999998 9999999999999999999999999998765432211 223
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
...|.+||......++.++|||||||++|||+||+.||.+...... ...+.... ...+.. ....+.+++.
T Consensus 178 t~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~------~~~i~~~~-~~~p~~---~~~~~~~li~ 247 (329)
T PTZ00263 178 TPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRI------YEKILAGR-LKFPNW---FDGRARDLVK 247 (329)
T ss_pred ChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHH------HHHHhcCC-cCCCCC---CCHHHHHHHH
Confidence 4457788988888889999999999999999999999874332110 11111111 111111 1234678999
Q ss_pred hcCCCCCCCCCC-----HHHHHHH
Q 005177 683 LCTRSTPSDRPS-----MEEALKL 701 (710)
Q Consensus 683 ~Cl~~~p~~RPs-----~~evl~~ 701 (710)
+|++.||++||+ ++|++++
T Consensus 248 ~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 248 GLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred HHhhcCHHHcCCCCCCCHHHHhcC
Confidence 999999999997 6777643
|
|
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=322.81 Aligned_cols=247 Identities=18% Similarity=0.216 Sum_probs=189.1
Q ss_pred hhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccC-CCCceeEEEEEEcCCceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ 520 (710)
..+.||+|+||.||+|+. ..+..||||+++... ...+.+.+|+++++++. |||||+++|+|.+.+..++||
T Consensus 41 ~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~ 120 (400)
T cd05105 41 LGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIIT 120 (400)
T ss_pred hhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEE
Confidence 678999999999999974 224579999997542 23567889999999996 999999999999999999999
Q ss_pred eecCCCChhhhhhc------------------------------------------------------------------
Q 005177 521 DYLPNGNLSEKIRT------------------------------------------------------------------ 534 (710)
Q Consensus 521 Ey~~~gsL~~~l~~------------------------------------------------------------------ 534 (710)
|||++|+|.++++.
T Consensus 121 Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (400)
T cd05105 121 EYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKY 200 (400)
T ss_pred EecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhh
Confidence 99999999988753
Q ss_pred --------------------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceE
Q 005177 535 --------------------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 582 (710)
Q Consensus 535 --------------------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~k 582 (710)
.+++.++.+++.|+++||+|||+. +|+||||||+||+++.++.+|
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~~~~~~k 277 (400)
T cd05105 201 SDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLAQGKIVK 277 (400)
T ss_pred hhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEeCCCEEE
Confidence 145667788999999999999998 999999999999999999999
Q ss_pred EcccCccccccccCCCC----cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccc
Q 005177 583 LAEFGFKYLTQLADGSF----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGE 657 (710)
Q Consensus 583 l~DfGla~~~~~~~~~~----~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~ 657 (710)
|+|||+++......... ......+.+||......++.++|||||||++|||++ |+.|+........ .. ..
T Consensus 278 L~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~-~~----~~ 352 (400)
T cd05105 278 ICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST-FY----NK 352 (400)
T ss_pred EEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH-HH----HH
Confidence 99999987643211111 111223567788777788999999999999999997 8888763221100 00 00
Q ss_pred cccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 658 MYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
+........+ ......+.+++.+||+.+|++||++.++.++|+++-+
T Consensus 353 ~~~~~~~~~~---~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 353 IKSGYRMAKP---DHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred HhcCCCCCCC---ccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 0000000001 1223467789999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=316.36 Aligned_cols=236 Identities=13% Similarity=0.080 Sum_probs=186.3
Q ss_pred hhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 453 EAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
.||+|+||.||++.. .+|+.||||.+.... .....+.+|++++++++||||+++++++..++..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~ 81 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGE 81 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCC
Confidence 589999999999985 679999999998532 234567889999999999999999999999999999999999999
Q ss_pred hhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Ccccc
Q 005177 528 LSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAKI 603 (710)
Q Consensus 528 L~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~~~ 603 (710)
|.+++.. .+++.+...++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........ ...+.
T Consensus 82 L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt 158 (328)
T cd05593 82 LFFHLSRERVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGT 158 (328)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCC
Confidence 9998865 468889999999999999999998 9999999999999999999999999998753211111 11234
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 683 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 683 (710)
..|.+||......++.++|||||||++|||+||+.||....... ....+.... ...+.. ....+.+++.+
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~------~~~~~~~~~-~~~p~~---~~~~~~~li~~ 228 (328)
T cd05593 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK------LFELILMED-IKFPRT---LSADAKSLLSG 228 (328)
T ss_pred cCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHH------HHHHhccCC-ccCCCC---CCHHHHHHHHH
Confidence 45778898887788999999999999999999999986432111 001111011 111111 22456788889
Q ss_pred cCCCCCCCCC-----CHHHHHHH
Q 005177 684 CTRSTPSDRP-----SMEEALKL 701 (710)
Q Consensus 684 Cl~~~p~~RP-----s~~evl~~ 701 (710)
|++.||++|| ++.|++++
T Consensus 229 ~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 229 LLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred HcCCCHHHcCCCCCCCHHHHhcC
Confidence 9999999997 88888754
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=307.08 Aligned_cols=252 Identities=18% Similarity=0.230 Sum_probs=191.4
Q ss_pred hhhhhcCCCCCccEEEE-----cCCCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcC--CceeEEE
Q 005177 450 ECEEAARPQSAAGCKAV-----LPTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~-----~~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ 520 (710)
....+|+|+||.||.+. ..++..||+|.++.... ..+.+.+|++.+++++||||+++++++... ...++||
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 87 (283)
T cd05080 8 KIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIM 87 (283)
T ss_pred eceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEe
Confidence 56789999999998764 25688999999976432 456788999999999999999999998764 3589999
Q ss_pred eecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--
Q 005177 521 DYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-- 597 (710)
Q Consensus 521 Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-- 597 (710)
||+++|+|.+++.. .+++.++..++.|+++|++|||+. +|+||||||+||++++++.+|++|||+++.......
T Consensus 88 e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 164 (283)
T cd05080 88 EYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 164 (283)
T ss_pred cCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccccCCcchhh
Confidence 99999999999875 678999999999999999999998 999999999999999999999999999876532211
Q ss_pred ---CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc--------ccccccccccccCC
Q 005177 598 ---SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID--------GLLGEMYNENEVGS 666 (710)
Q Consensus 598 ---~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ 666 (710)
....+...+.+||.......+.++|||||||++|||+||+.|+............ ....+..+....
T Consensus 165 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 242 (283)
T cd05080 165 RVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMR-- 242 (283)
T ss_pred ccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCC--
Confidence 1111223355778777777889999999999999999999887532211000000 000011111100
Q ss_pred CcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 667 SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 667 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
.+........+.+++.+||+.+|++|||++++++.|+.++
T Consensus 243 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 243 LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 0001112356788999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=304.01 Aligned_cols=248 Identities=13% Similarity=0.153 Sum_probs=193.7
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc----chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~----~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.+|+|+||.||+|.. .+|+.||||.+... ......+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 6 i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 85 (267)
T cd08228 6 IEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELAD 85 (267)
T ss_pred eeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecC
Confidence 678899999999999985 57899999988642 2234568889999999999999999999999999999999999
Q ss_pred CCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC
Q 005177 525 NGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 598 (710)
Q Consensus 525 ~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 598 (710)
+|+|.+++.. ..+......++.|+++||+|||+. +|+||||||+||+++.++.++++|||+++........
T Consensus 86 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~ 162 (267)
T cd08228 86 AGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA 162 (267)
T ss_pred CCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccchhHH
Confidence 9999988842 357778899999999999999998 9999999999999999999999999998765322111
Q ss_pred --CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHH
Q 005177 599 --FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 676 (710)
Q Consensus 599 --~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (710)
...+...+.+||...+...+.++|||||||++|||+||+.|+......... ..........+ +.........
T Consensus 163 ~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~ 236 (267)
T cd08228 163 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFS-LCQKIEQCDYP-----PLPTEHYSEK 236 (267)
T ss_pred HhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHH-HHHHHhcCCCC-----CCChhhcCHH
Confidence 111233456778877777888999999999999999999998643211100 00011111001 1111223356
Q ss_pred HHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 677 VLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 677 ~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
+.+++.+||+.+|++||++.||++.++.++
T Consensus 237 ~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 237 LRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred HHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 788999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=306.42 Aligned_cols=246 Identities=20% Similarity=0.256 Sum_probs=191.6
Q ss_pred CCchhhhhhcCCCCCccEEEEcCC------CcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCcee
Q 005177 446 FNSTECEEAARPQSAAGCKAVLPT------GITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 446 ~~~~~~~~ig~g~~g~vy~~~~~~------g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 517 (710)
|. ..+.||+|+||.||+|.... +..||+|.++... .....+.+|++.+.+++||||+++++++...+..+
T Consensus 7 ~~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 7 VR--FLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred cc--hhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 55 67889999999999997522 3689999997542 23566889999999999999999999999999999
Q ss_pred EEEeecCCCChhhhhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC
Q 005177 518 LLYDYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM 579 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~ 579 (710)
++|||+++|+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCCC
Confidence 99999999999999864 246778889999999999999998 999999999999999999
Q ss_pred ceEEcccCccccccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccc
Q 005177 580 EPHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGL 654 (710)
Q Consensus 580 ~~kl~DfGla~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~ 654 (710)
.+||+|||+++........ .......+.+||+.....++.++|||||||++|||+| |..|+.+.... + .
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~-~-----~ 235 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ-E-----V 235 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH-H-----H
Confidence 9999999998754321110 1111233667888777788999999999999999998 88887643211 0 1
Q ss_pred ccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 655 LGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
...+.... .. .........+.+++.+||+.||.+||+++||+++|+++
T Consensus 236 ~~~i~~~~-~~--~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 236 IEMIRSRQ-LL--PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HHHHHcCC-cC--CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 11111111 11 11122345677899999999999999999999999763
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-36 Score=316.82 Aligned_cols=235 Identities=12% Similarity=0.078 Sum_probs=185.2
Q ss_pred hhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 453 EAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
.||+|+||.||++.. .+|..||+|.++... .....+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCc
Confidence 589999999999985 679999999998632 234556789999999999999999999999999999999999999
Q ss_pred hhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Ccccc
Q 005177 528 LSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAKI 603 (710)
Q Consensus 528 L~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~~~ 603 (710)
|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........ ...+.
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt 158 (323)
T cd05595 82 LFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT 158 (323)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCC
Confidence 9998865 468889999999999999999998 9999999999999999999999999998753211111 11234
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 683 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 683 (710)
..|.+||+.....++.++|||||||++|||+||+.|+....... ....+.... ...+. .....+.+++.+
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~------~~~~~~~~~-~~~p~---~~~~~~~~li~~ 228 (323)
T cd05595 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER------LFELILMEE-IRFPR---TLSPEAKSLLAG 228 (323)
T ss_pred cCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHH------HHHHHhcCC-CCCCC---CCCHHHHHHHHH
Confidence 45678888877788999999999999999999999986432211 011111111 11111 122456688889
Q ss_pred cCCCCCCCCC-----CHHHHHH
Q 005177 684 CTRSTPSDRP-----SMEEALK 700 (710)
Q Consensus 684 Cl~~~p~~RP-----s~~evl~ 700 (710)
|++.||++|| ++.++++
T Consensus 229 ~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 229 LLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred HccCCHHHhCCCCCCCHHHHHc
Confidence 9999999998 7888765
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=300.41 Aligned_cols=240 Identities=18% Similarity=0.203 Sum_probs=186.4
Q ss_pred hhhcCCCCCccEEEEc-CCCcEEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCCh
Q 005177 452 EEAARPQSAAGCKAVL-PTGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
+.||+|+||.||+|.. .+|+.||+|.+... ......+.+|++++++++||||++++++|..++..++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 3689999999999986 57999999988643 22356788999999999999999999999999999999999999999
Q ss_pred hhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCc----c
Q 005177 529 SEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFP----A 601 (710)
Q Consensus 529 ~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~----~ 601 (710)
.++++. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+|++|||+++.......... .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 157 (252)
T cd05084 81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQ 157 (252)
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccCCCCC
Confidence 999864 468999999999999999999998 999999999999999999999999999875432110000 1
Q ss_pred cccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHH
Q 005177 602 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 680 (710)
Q Consensus 602 ~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 680 (710)
....|.+||......++.++|||||||++|||++ |..|+....... .. ..... ......+ ......+.++
T Consensus 158 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~--~~-~~~~~---~~~~~~~---~~~~~~~~~l 228 (252)
T cd05084 158 IPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ--TR-EAIEQ---GVRLPCP---ELCPDAVYRL 228 (252)
T ss_pred CceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH--HH-HHHHc---CCCCCCc---ccCCHHHHHH
Confidence 1122567788777778899999999999999998 666664321110 00 00000 0000001 1123467789
Q ss_pred HhhcCCCCCCCCCCHHHHHHHHh
Q 005177 681 ALLCTRSTPSDRPSMEEALKLLS 703 (710)
Q Consensus 681 ~~~Cl~~~p~~RPs~~evl~~L~ 703 (710)
+.+|++.+|++|||+.|+.++|+
T Consensus 229 i~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 229 MERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHcCCChhhCcCHHHHHHHHh
Confidence 99999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-36 Score=313.45 Aligned_cols=249 Identities=22% Similarity=0.280 Sum_probs=191.7
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
..+.||+|.||.|..+....+..||||.++.+.. ..++|.+|+++|.+++|||||.|+|+|..++.+++|+|||++|+
T Consensus 542 ~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGD 621 (807)
T KOG1094|consen 542 FKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGD 621 (807)
T ss_pred hhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCc
Confidence 5688999999999999998889999999997543 46899999999999999999999999999999999999999999
Q ss_pred hhhhhhcCC----CHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC-----CC
Q 005177 528 LSEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD-----GS 598 (710)
Q Consensus 528 L~~~l~~~~----~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~-----~~ 598 (710)
|.+++..+. .-..-.+|+.|||.||+||.+. ++||||+.+.|+|+|.++++||+|||++|-.-..+ +.
T Consensus 622 LnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr 698 (807)
T KOG1094|consen 622 LNQFLSAHELPTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGR 698 (807)
T ss_pred HHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccCCceeeecc
Confidence 999997631 2234468999999999999998 99999999999999999999999999998432211 12
Q ss_pred CcccccccCchhhhhccCCccccceeeHHHHHHHHHh--CCCCCCCCCCCCcccccccccccccccccC-CCcchHHHHH
Q 005177 599 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT--NGRLTNAGSSLQNKPIDGLLGEMYNENEVG-SSSSLQDEIK 675 (710)
Q Consensus 599 ~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 675 (710)
....+.|++. |.+...++++++|||+|||.+||+++ ..+|+..-.+.+ ..+....+.+..... ....+.-...
T Consensus 699 ~vlpiRwmaw-EsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~---vven~~~~~~~~~~~~~l~~P~~cp~ 774 (807)
T KOG1094|consen 699 AVLPIRWMAW-ESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ---VVENAGEFFRDQGRQVVLSRPPACPQ 774 (807)
T ss_pred eeeeeeehhH-HHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH---HHHhhhhhcCCCCcceeccCCCcCcH
Confidence 2224665544 55566789999999999999999966 566765322111 001112222211110 0011112234
Q ss_pred HHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 676 LVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 676 ~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
.+.+++++||..|.++||+++++...|++.
T Consensus 775 ~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 775 GLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred HHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 567999999999999999999999988754
|
|
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=318.91 Aligned_cols=241 Identities=17% Similarity=0.198 Sum_probs=183.4
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.||+|+||.||+|.. .+|+.||||.+.... ...+.+.+|++++++++|+|||++++++.+++..++||||+++|
T Consensus 78 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 157 (353)
T PLN00034 78 RVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGG 157 (353)
T ss_pred hhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCC
Confidence 667899999999999985 578999999997542 23567889999999999999999999999999999999999999
Q ss_pred ChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--CCccccc
Q 005177 527 NLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAKIA 604 (710)
Q Consensus 527 sL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--~~~~~~~ 604 (710)
+|.+.. ...+.....++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++....... ....+..
T Consensus 158 ~L~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~ 232 (353)
T PLN00034 158 SLEGTH--IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTI 232 (353)
T ss_pred cccccc--cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceecccccccccccccCc
Confidence 997653 245667788999999999999998 999999999999999999999999999876542211 1112344
Q ss_pred ccCchhhhhc-----cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHH
Q 005177 605 WTESGEFYNA-----MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 679 (710)
Q Consensus 605 ~~~~~e~~~~-----~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (710)
.|.+||.... ...+.++|||||||++|||++|+.||..... ..|... ...+.... . ..........+.+
T Consensus 233 ~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~-~~~~~~--~~~~~~~~-~--~~~~~~~~~~l~~ 306 (353)
T PLN00034 233 AYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQ-GDWASL--MCAICMSQ-P--PEAPATASREFRH 306 (353)
T ss_pred cccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCC-ccHHHH--HHHHhccC-C--CCCCCccCHHHHH
Confidence 4667776532 2345689999999999999999999863221 111110 00000000 0 0011122346778
Q ss_pred HHhhcCCCCCCCCCCHHHHHHH
Q 005177 680 VALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 680 l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
++.+||+.||++||++.|++++
T Consensus 307 li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 307 FISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred HHHHHccCChhhCcCHHHHhcC
Confidence 9999999999999999999875
|
|
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-35 Score=301.69 Aligned_cols=246 Identities=19% Similarity=0.285 Sum_probs=193.0
Q ss_pred CCchhhhhhcCCCCCccEEEEcC----CCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 446 FNSTECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 446 ~~~~~~~~ig~g~~g~vy~~~~~----~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
|+ ..+.+|+|+||.||+|... +...||||.++... .....+.+|+..+.+++||||+++++++.+.+..++|
T Consensus 6 ~~--~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 6 VT--IEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred ce--eeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 55 6788999999999999863 34689999987543 2356788899999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC
Q 005177 520 YDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 596 (710)
|||+++|+|.+++.. .+++.++.+++.|++.|++|||+. +|+||||||+||++++++.+|++|||+++......
T Consensus 84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (266)
T cd05033 84 TEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSE 160 (266)
T ss_pred EEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhcccccc
Confidence 999999999999865 468999999999999999999998 99999999999999999999999999988664211
Q ss_pred CCC----cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchH
Q 005177 597 GSF----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 671 (710)
Q Consensus 597 ~~~----~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (710)
... ......+.+||......++.++||||||+++|||+| |..|+....... ....+.+......+ .
T Consensus 161 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~------~~~~~~~~~~~~~~---~ 231 (266)
T cd05033 161 ATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD------VIKAVEDGYRLPPP---M 231 (266)
T ss_pred cceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH------HHHHHHcCCCCCCC---C
Confidence 111 111223667788777788999999999999999998 888875322110 01111111000101 1
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 672 DEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 672 ~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
+....+.+++.+|++.+|++||+++|++++|+++
T Consensus 232 ~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 232 DCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 2234577999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=313.41 Aligned_cols=194 Identities=16% Similarity=0.207 Sum_probs=164.2
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
+|. ..+.||+|+||.||++.. .+|..+|+|.+.... ...+.+.+|++++++++|||||+++++|.+++..++|||
T Consensus 6 ~y~--~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 6 DFE--KISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhh--eeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 355 778899999999999986 578899999987642 234668899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC
Q 005177 522 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 599 (710)
Q Consensus 522 y~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 599 (710)
|+++|+|.+++.. ..++.....++.++++||+|||+.. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~ 161 (333)
T cd06650 84 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 161 (333)
T ss_pred cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhcccc
Confidence 9999999999975 4677888899999999999999742 69999999999999999999999999987543221111
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCC
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNA 642 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~ 642 (710)
..+...+.+||...+..++.++|||||||++|||++|+.|+..
T Consensus 162 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 162 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred CCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 2233447788888877889999999999999999999999863
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-35 Score=301.71 Aligned_cols=248 Identities=14% Similarity=0.167 Sum_probs=195.3
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc----chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~----~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|++|.||++.. .+|..+|||.+... ......+.+|++++++++||||+++++++.+++..++||||++
T Consensus 6 ~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~ 85 (267)
T cd08229 6 IEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELAD 85 (267)
T ss_pred hhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecC
Confidence 678899999999999985 68999999988752 2234578889999999999999999999999999999999999
Q ss_pred CCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC
Q 005177 525 NGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 598 (710)
Q Consensus 525 ~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 598 (710)
+++|.+++.. ..++.+...++.|+++|++|||+. +|+|+||||+||+++.++.++++|||+++........
T Consensus 86 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~ 162 (267)
T cd08229 86 AGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA 162 (267)
T ss_pred CCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhccccCCcc
Confidence 9999998852 458889999999999999999998 9999999999999999999999999998765422111
Q ss_pred --CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHH
Q 005177 599 --FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 676 (710)
Q Consensus 599 --~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (710)
...+..++.+||+.....++.++||||||+++|||++|+.|+........ ...........+. . ........
T Consensus 163 ~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~-~----~~~~~~~~ 236 (267)
T cd08229 163 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY-SLCKKIEQCDYPP-L----PSDHYSEE 236 (267)
T ss_pred cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHH-HHhhhhhcCCCCC-C----CcccccHH
Confidence 11233446778888777888999999999999999999999864321100 0001111111110 0 11123346
Q ss_pred HHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 677 VLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 677 ~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
+.+++.+||+.+|++||||.+|+++++++.
T Consensus 237 ~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 237 LRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred HHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 778889999999999999999999998875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-36 Score=316.16 Aligned_cols=239 Identities=20% Similarity=0.205 Sum_probs=193.8
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc----chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~----~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+-+|.|+-|.|-.|+. .+|+.+|||.+... ......+.+||.+|+-+.||||+++++++++..++|+|.||++
T Consensus 16 LgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~ 95 (786)
T KOG0588|consen 16 LGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVP 95 (786)
T ss_pred ccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecC
Confidence 446689999999999986 78999999999764 2235568899999999999999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC-CCCcc
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD-GSFPA 601 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~-~~~~~ 601 (710)
+|.|++++-. .+...+..++..||..|+.|+|+. +|+|||+||+|+|||.+...||+|||+|-+..... -...+
T Consensus 96 gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeTSC 172 (786)
T KOG0588|consen 96 GGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLETSC 172 (786)
T ss_pred CchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecccCCccccccC
Confidence 9999999965 556677789999999999999999 99999999999999999999999999997653221 12344
Q ss_pred cccccCchhhhhccCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHH
Q 005177 602 KIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 680 (710)
Q Consensus 602 ~~~~~~~~e~~~~~~~-~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 680 (710)
+.+.|++||+..+.+| +.++||||-|||||.|+||+.||+++.- .. .+.++-... ..-+.....++.++
T Consensus 173 GSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNi-r~-----LLlKV~~G~----f~MPs~Is~eaQdL 242 (786)
T KOG0588|consen 173 GSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNI-RV-----LLLKVQRGV----FEMPSNISSEAQDL 242 (786)
T ss_pred CCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccH-HH-----HHHHHHcCc----ccCCCcCCHHHHHH
Confidence 6677999999988876 7789999999999999999999985431 11 111111111 11112234556788
Q ss_pred HhhcCCCCCCCCCCHHHHHHH
Q 005177 681 ALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 681 ~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+.+++..||++|.|++||.++
T Consensus 243 Lr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 243 LRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred HHHHhccCccccccHHHHhhC
Confidence 888999999999999999876
|
|
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-35 Score=306.17 Aligned_cols=246 Identities=19% Similarity=0.229 Sum_probs=193.3
Q ss_pred hhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccch-hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
....+|+|+||.||+|.. .++..+|+|.++.... ..+.+.+|++.+++++||||+++++++...+..++||||
T Consensus 9 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 88 (291)
T cd05094 9 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEY 88 (291)
T ss_pred EeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEec
Confidence 557899999999999973 3456799999976543 356788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEc
Q 005177 523 LPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 584 (710)
Q Consensus 523 ~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~ 584 (710)
+++|+|.+++.. .++|..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+
T Consensus 89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~ 165 (291)
T cd05094 89 MKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIG 165 (291)
T ss_pred CCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEEEC
Confidence 999999999853 257889999999999999999998 99999999999999999999999
Q ss_pred ccCccccccccCC----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccc
Q 005177 585 EFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMY 659 (710)
Q Consensus 585 DfGla~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 659 (710)
|||+++....... ........+.+||......++.++|||||||++|||+| |+.|+....... . ...+.
T Consensus 166 dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~----~~~~~ 239 (291)
T cd05094 166 DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE--V----IECIT 239 (291)
T ss_pred CCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--H----HHHHh
Confidence 9999875432111 11112234678888887888999999999999999999 888875432211 0 00111
Q ss_pred cccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 660 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
......... .....+.+++.+||+.+|++||++++|+++|+++.+
T Consensus 240 ~~~~~~~~~---~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 240 QGRVLERPR---VCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred CCCCCCCCc---cCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 111000011 123457799999999999999999999999988854
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=314.66 Aligned_cols=247 Identities=22% Similarity=0.242 Sum_probs=188.9
Q ss_pred hhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccc--hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcC-CceeEE
Q 005177 450 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNR-HQAYLL 519 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~-~~~~lv 519 (710)
..+.||+|+||.||+|.. .+++.||+|+++... ...+.+.+|++++.++ +||||++++++|... ...++|
T Consensus 11 i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v 90 (337)
T cd05054 11 LGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVI 90 (337)
T ss_pred hhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEE
Confidence 678999999999999963 345789999997532 2345677899999999 799999999988754 578899
Q ss_pred EeecCCCChhhhhhc---------------------------------------------------------------CC
Q 005177 520 YDYLPNGNLSEKIRT---------------------------------------------------------------KR 536 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~---------------------------------------------------------------~~ 536 (710)
|||+++|+|.+++.. .+
T Consensus 91 ~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (337)
T cd05054 91 VEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPL 170 (337)
T ss_pred EecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCC
Confidence 999999999998842 35
Q ss_pred CHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC----CcccccccCchhhh
Q 005177 537 DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS----FPAKIAWTESGEFY 612 (710)
Q Consensus 537 ~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~----~~~~~~~~~~~e~~ 612 (710)
+|..+.+++.||++||+|||+. +|+||||||+||++++++.+||+|||+++........ ...+...|.+||+.
T Consensus 171 ~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~ 247 (337)
T cd05054 171 TLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESI 247 (337)
T ss_pred CHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHh
Confidence 7888999999999999999998 9999999999999999999999999999765321111 11112236678888
Q ss_pred hccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCC
Q 005177 613 NAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSD 691 (710)
Q Consensus 613 ~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~ 691 (710)
....++.++|||||||++|||++ |+.|+.+...... ........... .........+.+++.+||+.+|++
T Consensus 248 ~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~------~~~~~~~~~~~--~~~~~~~~~~~~l~~~cl~~~p~~ 319 (337)
T cd05054 248 FDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE------FCRRLKEGTRM--RAPEYATPEIYSIMLDCWHNNPED 319 (337)
T ss_pred cCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH------HHHHHhccCCC--CCCccCCHHHHHHHHHHccCChhh
Confidence 88889999999999999999998 8888753221110 00000000000 001112346789999999999999
Q ss_pred CCCHHHHHHHHhccCC
Q 005177 692 RPSMEEALKLLSGLKP 707 (710)
Q Consensus 692 RPs~~evl~~L~~~~~ 707 (710)
||++.|++++|+++-+
T Consensus 320 RPs~~ell~~l~~~~~ 335 (337)
T cd05054 320 RPTFSELVEILGDLLQ 335 (337)
T ss_pred CcCHHHHHHHHHHHHh
Confidence 9999999999987643
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-35 Score=304.66 Aligned_cols=252 Identities=19% Similarity=0.301 Sum_probs=189.8
Q ss_pred hhhhhcCCCCCccEEEEc-----CCCcEEEEEEeeccch-hHHHHHHHHHHHhccCCCCceeEEEEEEcC--CceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVL-----PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-----~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~E 521 (710)
..+.+|+|+||.||++.. .+|..||||++..... ..+.+.+|++++++++||||+++++++... ...++|||
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 87 (284)
T cd05081 8 FIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVME 87 (284)
T ss_pred eeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEE
Confidence 668899999999999974 4688999999976433 356788999999999999999999988643 46899999
Q ss_pred ecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC
Q 005177 522 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 598 (710)
Q Consensus 522 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 598 (710)
|+++|+|.+++.. .++|..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++........
T Consensus 88 ~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~ 164 (284)
T cd05081 88 YLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEY 164 (284)
T ss_pred ecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCcccccccCCCcc
Confidence 9999999999964 468999999999999999999998 9999999999999999999999999998865322111
Q ss_pred C----cc-cccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCC-cccccc--------ccccccccccc
Q 005177 599 F----PA-KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ-NKPIDG--------LLGEMYNENEV 664 (710)
Q Consensus 599 ~----~~-~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~-~~~~~~--------~~~~~~~~~~~ 664 (710)
. .. ....+.+||......++.++|||||||++|||++|..++....... ...... ...+.......
T Consensus 165 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (284)
T cd05081 165 YKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGR 244 (284)
T ss_pred eeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCc
Confidence 0 11 1122557788777778899999999999999999876654211100 000000 00001111100
Q ss_pred CCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 665 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 665 ~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
.+........+.+++.+||+.+|++||||+|+++.|+.++
T Consensus 245 --~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 245 --LPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred --CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 0001112346778999999999999999999999998774
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-35 Score=300.01 Aligned_cols=244 Identities=18% Similarity=0.237 Sum_probs=194.2
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccch-hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCCh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
..+.+|+|++|.||+|...++..+|+|.+..... ....+.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 10 ~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 89 (261)
T cd05148 10 LERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSL 89 (261)
T ss_pred HhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCH
Confidence 6789999999999999987899999999986544 456788999999999999999999999999999999999999999
Q ss_pred hhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCc--cc
Q 005177 529 SEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFP--AK 602 (710)
Q Consensus 529 ~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~--~~ 602 (710)
.++++. ..++.++.+++.|++.|++|||+. +|+||||||+||++++++.+||+|||++........... ..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~~ 166 (261)
T cd05148 90 LAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKI 166 (261)
T ss_pred HHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCCccccccCCCC
Confidence 999975 468899999999999999999998 999999999999999999999999999876532211111 11
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHH
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 681 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 681 (710)
...+.+||......++.++|||||||++|||++ |+.|+....... ....+........+ ......+.+++
T Consensus 167 ~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~------~~~~~~~~~~~~~~---~~~~~~~~~~i 237 (261)
T cd05148 167 PYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE------VYDQITAGYRMPCP---AKCPQEIYKIM 237 (261)
T ss_pred ceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH------HHHHHHhCCcCCCC---CCCCHHHHHHH
Confidence 223567788777788899999999999999999 777775332110 01111111001101 12234577899
Q ss_pred hhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 682 LLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 682 ~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
.+|++.+|++|||+.++++.|+.+
T Consensus 238 ~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 238 LECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred HHHcCCCchhCcCHHHHHHHHhcC
Confidence 999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=316.84 Aligned_cols=241 Identities=15% Similarity=0.090 Sum_probs=189.9
Q ss_pred cCCchhhhhhcCCCCCccEEEEcC--CCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVLP--TGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~~--~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
+|. ..+.||+|+||.||+|... ++..||+|++.... ...+.+.+|+++++.++|||||++++++.+++..++
T Consensus 31 ~y~--~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 31 DFN--FIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hcE--EEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 355 6788999999999999753 34689999997532 234567889999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC
Q 005177 519 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 596 (710)
||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 109 v~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~ 185 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRT 185 (340)
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecCCCc
Confidence 9999999999999965 467888899999999999999998 99999999999999999999999999987654322
Q ss_pred CCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHH
Q 005177 597 GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 676 (710)
Q Consensus 597 ~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (710)
. ...++..|++||+.....++.++|||||||++|||+||+.|+....... . ...+.... ...+... ...
T Consensus 186 ~-~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~--~----~~~i~~~~-~~~p~~~---~~~ 254 (340)
T PTZ00426 186 Y-TLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLL--I----YQKILEGI-IYFPKFL---DNN 254 (340)
T ss_pred c-eecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHH--H----HHHHhcCC-CCCCCCC---CHH
Confidence 1 1223445778898888788999999999999999999999987543211 0 01111111 1111111 234
Q ss_pred HHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 005177 677 VLDVALLCTRSTPSDRP-----SMEEALKL 701 (710)
Q Consensus 677 ~~~l~~~Cl~~~p~~RP-----s~~evl~~ 701 (710)
+.+++.+|++.||++|+ +++|+.++
T Consensus 255 ~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 255 CKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred HHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 56888999999999995 88888764
|
|
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-35 Score=302.60 Aligned_cols=244 Identities=18% Similarity=0.254 Sum_probs=185.8
Q ss_pred hhhhhcCCCCCccEEEEc-CCCc----EEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGI----TVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~----~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
..+.||+|+||.||+|.. .+|. .||+|.+.... .....+..|+..+++++|||||+++|++. ....++++||
T Consensus 11 ~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i~e~ 89 (279)
T cd05111 11 KLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLVTQL 89 (279)
T ss_pred eccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEEEEe
Confidence 678899999999999985 4554 47888876432 22456777888899999999999999885 4567899999
Q ss_pred cCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC-
Q 005177 523 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 598 (710)
Q Consensus 523 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~- 598 (710)
+++|+|.++++. ..+|.....++.|++.||+|||+. +++||||||+||++++++.+||+|||+++........
T Consensus 90 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~ 166 (279)
T cd05111 90 SPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKY 166 (279)
T ss_pred CCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceeccCCCccc
Confidence 999999999964 468999999999999999999998 9999999999999999999999999999765322111
Q ss_pred ---CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccc-cCCCcchHHH
Q 005177 599 ---FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENE-VGSSSSLQDE 673 (710)
Q Consensus 599 ---~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 673 (710)
...+...+.+||......++.++|||||||++|||+| |+.|+.+..... ..+...... ...+.. .
T Consensus 167 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~~---~ 236 (279)
T cd05111 167 FYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE-------VPDLLEKGERLAQPQI---C 236 (279)
T ss_pred ccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH-------HHHHHHCCCcCCCCCC---C
Confidence 1112223567788877788999999999999999998 888875432110 001111100 000111 1
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
...+.+++.+||+.+|++|||+.|+++.|..+.+
T Consensus 237 ~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 237 TIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred CHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 2345678889999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=308.37 Aligned_cols=248 Identities=17% Similarity=0.196 Sum_probs=185.7
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.||+|+||.||+|.. .++..||+|.++.... ....+.+|++++++++||||+++++++.+++..++||||++ |
T Consensus 9 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~ 87 (288)
T cd07871 9 KLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLD-S 87 (288)
T ss_pred EeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCC-c
Confidence 678899999999999985 5789999999975322 24467789999999999999999999999999999999998 5
Q ss_pred Chhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Ccc
Q 005177 527 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPA 601 (710)
Q Consensus 527 sL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~ 601 (710)
+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ ...
T Consensus 88 ~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~~ 164 (288)
T cd07871 88 DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEV 164 (288)
T ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccCce
Confidence 99988864 357888899999999999999998 9999999999999999999999999998764322111 112
Q ss_pred cccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc---------------cccc---cccccccccc
Q 005177 602 KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPID---GLLGEMYNEN 662 (710)
Q Consensus 602 ~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~---------------~~~~---~~~~~~~~~~ 662 (710)
+..++.+||...+ ..++.++||||+||++|||+||+.||.+...... |... ........+.
T Consensus 165 ~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (288)
T cd07871 165 VTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQ 244 (288)
T ss_pred ecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCc
Confidence 3445777887653 5678899999999999999999999864321110 0000 0000000000
Q ss_pred ccCCC--cchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 663 EVGSS--SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 663 ~~~~~--~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
....+ ........+..+++.+|++.||++|||++|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 245 YRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred cCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000 0000112457799999999999999999999753
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-35 Score=300.22 Aligned_cols=249 Identities=16% Similarity=0.183 Sum_probs=195.4
Q ss_pred hhhhhcCCCCCccEEEEcC-CCcEEEEEEeecc----chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~-~g~~vAvK~l~~~----~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.+|+|++|.||+|... +|+.||+|.++.. ....+.+.+|++++++++|+||+++++++.+.+..++||||++
T Consensus 6 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 85 (267)
T cd08224 6 IEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELAD 85 (267)
T ss_pred eeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCC
Confidence 6688999999999999874 8999999998642 2235678899999999999999999999999999999999999
Q ss_pred CCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC
Q 005177 525 NGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 598 (710)
Q Consensus 525 ~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 598 (710)
+|+|.+++.. ..++.++..++.++++|++|||+. +|+||||||+||+++.++.++++|||+++........
T Consensus 86 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~ 162 (267)
T cd08224 86 AGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA 162 (267)
T ss_pred CCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccCCCcc
Confidence 9999998853 357888999999999999999998 9999999999999999999999999998754322111
Q ss_pred C--cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHH
Q 005177 599 F--PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 676 (710)
Q Consensus 599 ~--~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (710)
. ......+.+||......++.++|||||||++|||++|+.|+........ .......... .. +.........
T Consensus 163 ~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~~~-~~-~~~~~~~~~~ 236 (267)
T cd08224 163 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY----SLCKKIEKCD-YP-PLPADHYSEE 236 (267)
T ss_pred cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHH----HHHhhhhcCC-CC-CCChhhcCHH
Confidence 1 1123346678887777888999999999999999999999864321100 0001110000 00 0011123346
Q ss_pred HHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 677 VLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 677 ~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
+.+++.+||..+|++||++.+++++|+++++
T Consensus 237 ~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~~ 267 (267)
T cd08224 237 LRDLVSRCINPDPEKRPDISYVLQVAKEMHA 267 (267)
T ss_pred HHHHHHHHcCCCcccCCCHHHHHHHHHHhcC
Confidence 7789999999999999999999999998864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=316.95 Aligned_cols=248 Identities=21% Similarity=0.288 Sum_probs=184.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcCC-----ceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH-----QAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-----~~~lv~ 520 (710)
..+.||+|+||.||+|+. .+|..||||++... ......+.+|++++++++||||+++++++...+ ..|+||
T Consensus 4 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~ 83 (338)
T cd07859 4 IQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVF 83 (338)
T ss_pred EEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEE
Confidence 567899999999999985 67899999998742 223456788999999999999999999986532 479999
Q ss_pred eecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC
Q 005177 521 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 598 (710)
Q Consensus 521 Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 598 (710)
|||. ++|.+++.. ..++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 84 e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~ 159 (338)
T cd07859 84 ELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 159 (338)
T ss_pred ecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccccccccccCc
Confidence 9996 689998865 568889999999999999999998 9999999999999999999999999998754221111
Q ss_pred -----CcccccccCchhhhhc--cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc---------cccc---------
Q 005177 599 -----FPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK---------PIDG--------- 653 (710)
Q Consensus 599 -----~~~~~~~~~~~e~~~~--~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~---------~~~~--------- 653 (710)
...+..+|.+||+... ..++.++|||||||++|||+||+.||.+....... +...
T Consensus 160 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 239 (338)
T cd07859 160 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEK 239 (338)
T ss_pred cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhh
Confidence 1124455778888754 56888999999999999999999988643321100 0000
Q ss_pred ---cccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 654 ---LLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 654 ---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
....+..................+.+++.+|++.||++|||++|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 240 ARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 000000000000000001112456789999999999999999999864
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-35 Score=305.40 Aligned_cols=239 Identities=13% Similarity=0.104 Sum_probs=184.6
Q ss_pred hcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCCh
Q 005177 454 AARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 454 ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
||+|+||.||++.. .+|+.||||.+..... ..+.+..|++++++++||||+++.+++..++..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 68999999999985 6789999999975422 234567899999999999999999999999999999999999999
Q ss_pred hhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Cc
Q 005177 529 SEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FP 600 (710)
Q Consensus 529 ~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~ 600 (710)
.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........ ..
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 157 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGY 157 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccccc
Confidence 988742 467888999999999999999998 9999999999999999999999999998754322111 11
Q ss_pred ccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHH
Q 005177 601 AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 680 (710)
Q Consensus 601 ~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 680 (710)
.+...+.+||......++.++|||||||++|||+||+.|+......... ........... ...+ ......+.++
T Consensus 158 ~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~--~~~~~~~~~~~-~~~~---~~~~~~~~~l 231 (280)
T cd05608 158 AGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN--KELKQRILNDS-VTYP---DKFSPASKSF 231 (280)
T ss_pred CCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhH--HHHHHhhcccC-CCCc---ccCCHHHHHH
Confidence 2334467889888888899999999999999999999998743221110 00011111111 1101 1223456788
Q ss_pred HhhcCCCCCCCCC-----CHHHHHHH
Q 005177 681 ALLCTRSTPSDRP-----SMEEALKL 701 (710)
Q Consensus 681 ~~~Cl~~~p~~RP-----s~~evl~~ 701 (710)
+.+|++.||++|| +++|++++
T Consensus 232 i~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 232 CEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred HHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 8999999999999 67777753
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=313.08 Aligned_cols=241 Identities=15% Similarity=0.136 Sum_probs=183.1
Q ss_pred hhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 453 EAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
.||+|+||.||+|.. .+++.||+|.++... ...+.+.+|+.++.++ +|||||++++++.+++..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~ 81 (329)
T cd05618 2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGG 81 (329)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCC
Confidence 689999999999985 578899999998632 2345577788888766 7999999999999999999999999999
Q ss_pred Chhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--CCccc
Q 005177 527 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAK 602 (710)
Q Consensus 527 sL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--~~~~~ 602 (710)
+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....+
T Consensus 82 ~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (329)
T cd05618 82 DLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCG 158 (329)
T ss_pred CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccC
Confidence 99988864 568888999999999999999998 999999999999999999999999999875321111 11123
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCC--cccccccc-cccccccccCCCcchHHHHHHHHH
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ--NKPIDGLL-GEMYNENEVGSSSSLQDEIKLVLD 679 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 679 (710)
+..|.+||+..+..++.++|||||||++|||+||+.|+....... ........ ..+.... ...+. .....+.+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~-~~~p~---~~~~~~~~ 234 (329)
T cd05618 159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-IRIPR---SLSVKAAS 234 (329)
T ss_pred CccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC-CCCCC---CCCHHHHH
Confidence 445778898888888999999999999999999999986211110 00000000 1111111 11111 12345678
Q ss_pred HHhhcCCCCCCCCCC------HHHHHH
Q 005177 680 VALLCTRSTPSDRPS------MEEALK 700 (710)
Q Consensus 680 l~~~Cl~~~p~~RPs------~~evl~ 700 (710)
++.+|++.||++||+ +.|+++
T Consensus 235 ll~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05618 235 VLKSFLNKDPKERLGCHPQTGFADIQG 261 (329)
T ss_pred HHHHHhcCCHHHcCCCCCCCCHHHHhc
Confidence 999999999999998 466654
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=300.81 Aligned_cols=249 Identities=16% Similarity=0.181 Sum_probs=191.4
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---------------hHHHHHHHHHHHhccCCCCce
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---------------RIKIVSEFITRIGTVRHKNLI 504 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---------------~~~~~~~e~~~l~~l~H~niv 504 (710)
...+.|. ....||+|.||.|-+|.. .+++.||||.+.+... ..+...+||.+|++++|||||
T Consensus 94 k~lNqy~--l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV 171 (576)
T KOG0585|consen 94 KQLNQYE--LIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVV 171 (576)
T ss_pred eehhhee--hhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCee
Confidence 3455677 888999999999999984 7899999999975211 135789999999999999999
Q ss_pred eEEEEEEcC--CceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc
Q 005177 505 RLLGFCYNR--HQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580 (710)
Q Consensus 505 ~l~g~~~~~--~~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~ 580 (710)
+|+.+..+. +.+|||+|||..|.+...=.. .+...+..+|..++..||+|||.+ +||||||||+|+||+++|+
T Consensus 172 ~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g~ 248 (576)
T KOG0585|consen 172 KLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDGT 248 (576)
T ss_pred EEEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCCc
Confidence 999998764 579999999999987654332 267788899999999999999999 9999999999999999999
Q ss_pred eEEcccCccccccccC--------CCCcccccccCchhhhhc----cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc
Q 005177 581 PHLAEFGFKYLTQLAD--------GSFPAKIAWTESGEFYNA----MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN 648 (710)
Q Consensus 581 ~kl~DfGla~~~~~~~--------~~~~~~~~~~~~~e~~~~----~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~ 648 (710)
+||+|||.+....... ....++.++ .+||.... ...+.+.||||+||+||.|+.|+.||.+...+.
T Consensus 249 VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF-~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~- 326 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAF-FAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELE- 326 (576)
T ss_pred EEeeccceeeecccCCccccHHHHhhcCCCccc-cchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHH-
Confidence 9999999987542111 012223343 45555433 124567899999999999999999998654332
Q ss_pred ccccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHh
Q 005177 649 KPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 703 (710)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~ 703 (710)
...++++.. +. .+..+++.....+++.+++++||++|.+..||..+.-
T Consensus 327 -----l~~KIvn~p-L~-fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpw 374 (576)
T KOG0585|consen 327 -----LFDKIVNDP-LE-FPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPW 374 (576)
T ss_pred -----HHHHHhcCc-cc-CCCcccccHHHHHHHHHHhhcChhheeehhhheecce
Confidence 233444433 22 2233345567778999999999999999999876653
|
|
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-35 Score=304.67 Aligned_cols=246 Identities=19% Similarity=0.222 Sum_probs=191.9
Q ss_pred hhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
..+.+|+|+||.||++.. .++..+|+|.+.... ...+.+.+|++++++++||||+++++++...+..++||||
T Consensus 9 ~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 88 (288)
T cd05093 9 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEY 88 (288)
T ss_pred eccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEc
Confidence 678899999999999974 345679999997643 3356789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhc---------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccC
Q 005177 523 LPNGNLSEKIRT---------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG 587 (710)
Q Consensus 523 ~~~gsL~~~l~~---------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG 587 (710)
+++|+|.+++.. .+++.++.+++.|++.||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg 165 (288)
T cd05093 89 MKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFG 165 (288)
T ss_pred CCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEEeccCC
Confidence 999999999863 268889999999999999999998 99999999999999999999999999
Q ss_pred ccccccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccccccc
Q 005177 588 FKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNEN 662 (710)
Q Consensus 588 la~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 662 (710)
+++........ .......+.+||......++.++|||||||++|||+| |+.|+...... . . ...+....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~-~-~----~~~i~~~~ 239 (288)
T cd05093 166 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-E-V----IECITQGR 239 (288)
T ss_pred ccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-H-H----HHHHHcCC
Confidence 98754321111 1111223667888877788999999999999999999 77776532211 0 0 01111111
Q ss_pred ccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 663 EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 663 ~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
....+. .....+.+++.+||+.+|.+|||++|+.+.|+.+..
T Consensus 240 ~~~~~~---~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~ 281 (288)
T cd05093 240 VLQRPR---TCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK 281 (288)
T ss_pred cCCCCC---CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 000011 122457899999999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=312.51 Aligned_cols=236 Identities=15% Similarity=0.141 Sum_probs=184.7
Q ss_pred hhhcCCCCCccEEEEc----CCCcEEEEEEeeccc-----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 452 EEAARPQSAAGCKAVL----PTGITVSVKKIEWGA-----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~----~~g~~vAvK~l~~~~-----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
+.||+|+||.||++.. .+|+.||||.++... .....+.+|++++++++||||+++++++.+++..|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5689999999999974 468899999998532 2234567899999999999999999999999999999999
Q ss_pred cCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--C
Q 005177 523 LPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--S 598 (710)
Q Consensus 523 ~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--~ 598 (710)
+++|+|.+++.. ...+.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... .
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (323)
T cd05584 82 LSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTH 158 (323)
T ss_pred CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCccc
Confidence 999999999865 346777888999999999999998 999999999999999999999999999874322111 1
Q ss_pred CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHH
Q 005177 599 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 678 (710)
Q Consensus 599 ~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (710)
...+...|.+||+.....++.++|||||||++|||++|+.||....... ....+.... ...+.. ....+.
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~------~~~~~~~~~-~~~~~~---~~~~~~ 228 (323)
T cd05584 159 TFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK------TIDKILKGK-LNLPPY---LTPEAR 228 (323)
T ss_pred ccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH------HHHHHHcCC-CCCCCC---CCHHHH
Confidence 1123445778888877788899999999999999999999986433211 011111111 111111 224567
Q ss_pred HHHhhcCCCCCCCCC-----CHHHHHH
Q 005177 679 DVALLCTRSTPSDRP-----SMEEALK 700 (710)
Q Consensus 679 ~l~~~Cl~~~p~~RP-----s~~evl~ 700 (710)
+++.+|++.+|++|| +++++++
T Consensus 229 ~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 229 DLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred HHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 899999999999999 7887765
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=307.15 Aligned_cols=247 Identities=17% Similarity=0.187 Sum_probs=187.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.+|+|+||.||++.. .++..||||+++... ...+.+.+|++++++++||||+++++++..++..++||||+++
T Consensus 5 ~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 84 (287)
T cd07848 5 VLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEK 84 (287)
T ss_pred EEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCC
Confidence 667899999999999986 578899999997542 2245678899999999999999999999999999999999998
Q ss_pred CChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC---Cc
Q 005177 526 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS---FP 600 (710)
Q Consensus 526 gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~---~~ 600 (710)
+.+..+... ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........ ..
T Consensus 85 ~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 161 (287)
T cd07848 85 NMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEY 161 (287)
T ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccccccccccccc
Confidence 877655432 567888899999999999999998 9999999999999999999999999998765322111 11
Q ss_pred ccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc-ccc-----------------cccccccc
Q 005177 601 AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-DGL-----------------LGEMYNEN 662 (710)
Q Consensus 601 ~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~-~~~-----------------~~~~~~~~ 662 (710)
.+...+.+||+.....++.++|||||||++|||++|+.||........... ... ......+.
T Consensus 162 ~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (287)
T cd07848 162 VATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPA 241 (287)
T ss_pred ccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCc
Confidence 234457788988777889999999999999999999998874322110000 000 00000000
Q ss_pred ccCCCcc-----hHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 663 EVGSSSS-----LQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 663 ~~~~~~~-----~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
...... .......+.+++.+|++.||++|||++|+++
T Consensus 242 -~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 242 -VNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred -ccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000000 0112345789999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=314.71 Aligned_cols=236 Identities=13% Similarity=0.074 Sum_probs=185.3
Q ss_pred hhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 453 EAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
.||+|+||.||++.. .+|..||+|.++... .....+.+|++++.+++||||+++++++..++..++||||+++|+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCc
Confidence 589999999999985 679999999998632 234566788999999999999999999999999999999999999
Q ss_pred hhhhhhc--CCCHHHHHHHHHHHHHHHHHHhc-CCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Cccc
Q 005177 528 LSEKIRT--KRDWAAKYKIVLGVARGLCFLHH-DCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAK 602 (710)
Q Consensus 528 L~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~~ 602 (710)
|.+++.. .+++.....++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+++........ ...+
T Consensus 82 L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (325)
T cd05594 82 LFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCG 158 (325)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccC
Confidence 9998865 46888999999999999999996 5 8999999999999999999999999998753211111 1123
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
...|.+||+.....++.++|||||||++|||+||+.|+....... ....+.... ...+.. ....+.+++.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~------~~~~i~~~~-~~~p~~---~~~~~~~li~ 228 (325)
T cd05594 159 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK------LFELILMEE-IRFPRT---LSPEAKSLLS 228 (325)
T ss_pred CcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHH------HHHHHhcCC-CCCCCC---CCHHHHHHHH
Confidence 445778898888888999999999999999999999986432211 001111111 111111 2245678888
Q ss_pred hcCCCCCCCCC-----CHHHHHHH
Q 005177 683 LCTRSTPSDRP-----SMEEALKL 701 (710)
Q Consensus 683 ~Cl~~~p~~RP-----s~~evl~~ 701 (710)
+|++.||++|+ ++.|++++
T Consensus 229 ~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 229 GLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred HHhhcCHHHhCCCCCCCHHHHhcC
Confidence 99999999996 89998754
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-35 Score=302.77 Aligned_cols=242 Identities=21% Similarity=0.233 Sum_probs=187.5
Q ss_pred hhhhhcCCCCCccEEEEc-----CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVL-----PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-----~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
..+.||+|+||.||+|.. .++..||+|.++... .....+.+|++++++++||||+++++++..++..++||||
T Consensus 9 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 88 (283)
T cd05090 9 FMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEY 88 (283)
T ss_pred eeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEc
Confidence 557899999999999973 456899999997532 2346788899999999999999999999999999999999
Q ss_pred cCCCChhhhhhc-------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEE
Q 005177 523 LPNGNLSEKIRT-------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 583 (710)
Q Consensus 523 ~~~gsL~~~l~~-------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl 583 (710)
+++|+|.+++.. .+++.+...++.|++.||+|||+. +|+||||||+||++++++.+|+
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~~~~kl 165 (283)
T cd05090 89 LNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQLHVKI 165 (283)
T ss_pred CCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCCCcEEe
Confidence 999999999842 256778889999999999999998 9999999999999999999999
Q ss_pred cccCccccccccCC----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccc
Q 005177 584 AEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEM 658 (710)
Q Consensus 584 ~DfGla~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~ 658 (710)
+|||+++....... ........|.+||+.....++.++|||||||++|||+| |..|+.+.... . ..+.
T Consensus 166 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~-~------~~~~ 238 (283)
T cd05090 166 SDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ-E------VIEM 238 (283)
T ss_pred ccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH-H------HHHH
Confidence 99999875432111 11111223667888777788999999999999999999 77776532210 0 0111
Q ss_pred ccccc-cCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhc
Q 005177 659 YNENE-VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 704 (710)
Q Consensus 659 ~~~~~-~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~ 704 (710)
..... ...+. .....+.+++.+|++.+|++||++.++.++|..
T Consensus 239 ~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 239 VRKRQLLPCSE---DCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHcCCcCCCCC---CCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 11110 11111 122456788899999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=295.45 Aligned_cols=239 Identities=20% Similarity=0.236 Sum_probs=188.0
Q ss_pred hhcCCCCCccEEEEcCCCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChhh
Q 005177 453 EAARPQSAAGCKAVLPTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSE 530 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~~ 530 (710)
+||+|+||.||+|...++..||+|.+..... ....+.+|++.+++++||||++++++|...+..++||||+++|+|.+
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 81 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS 81 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence 6899999999999988899999999875432 24468889999999999999999999999999999999999999999
Q ss_pred hhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC---Cccccc
Q 005177 531 KIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS---FPAKIA 604 (710)
Q Consensus 531 ~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~---~~~~~~ 604 (710)
++.. ..++..+..++.|++.||.|+|.. +++||||||+||+++.++.+|++|||++......... ......
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~ 158 (250)
T cd05085 82 FLRKKKDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPI 158 (250)
T ss_pred HHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcc
Confidence 9864 458899999999999999999998 9999999999999999999999999998653221111 011122
Q ss_pred ccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhh
Q 005177 605 WTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 683 (710)
Q Consensus 605 ~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 683 (710)
.+.+||+.....++.++|||||||++||+++ |..|+.+..... ... ....... ...+ ......+.+++.+
T Consensus 159 ~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~--~~~-~~~~~~~---~~~~---~~~~~~~~~li~~ 229 (250)
T cd05085 159 KWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ--ARE-QVEKGYR---MSCP---QKCPDDVYKVMQR 229 (250)
T ss_pred cccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH--HHH-HHHcCCC---CCCC---CCCCHHHHHHHHH
Confidence 3667888887888999999999999999999 877875322110 000 0000000 0001 1123567889999
Q ss_pred cCCCCCCCCCCHHHHHHHHh
Q 005177 684 CTRSTPSDRPSMEEALKLLS 703 (710)
Q Consensus 684 Cl~~~p~~RPs~~evl~~L~ 703 (710)
|++.+|++||++.|+++.|.
T Consensus 230 ~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 230 CWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HcccCcccCCCHHHHHHHhc
Confidence 99999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-36 Score=305.24 Aligned_cols=239 Identities=20% Similarity=0.238 Sum_probs=193.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.||+|.||.||||.. .+++.||+|.+.... ....+..+|+.++.+.+|+||.++||.+..+..++++||||.+|
T Consensus 17 ~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gG 96 (467)
T KOG0201|consen 17 KLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGG 96 (467)
T ss_pred cchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCc
Confidence 668999999999999985 789999999998753 34678899999999999999999999999999999999999999
Q ss_pred ChhhhhhcCC--CHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--CCccc
Q 005177 527 NLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAK 602 (710)
Q Consensus 527 sL~~~l~~~~--~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--~~~~~ 602 (710)
++.+.++... +.....-|+.++..|+.|||.+ +.+|||||+.|||+..+|.+|++|||++-....... ....+
T Consensus 97 sv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvG 173 (467)
T KOG0201|consen 97 SVLDLLKSGNILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFVG 173 (467)
T ss_pred chhhhhccCCCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeechhhccccccc
Confidence 9999998632 4455566788999999999999 999999999999999999999999999765432221 12236
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchH-HHHHHHHHHH
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ-DEIKLVLDVA 681 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~ 681 (710)
++|+++||+.....|+.|+||||+|++.+||++|..|+..-..+. .+--+.... ++... ...+.+.+++
T Consensus 174 TPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr------vlflIpk~~----PP~L~~~~S~~~kEFV 243 (467)
T KOG0201|consen 174 TPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR------VLFLIPKSA----PPRLDGDFSPPFKEFV 243 (467)
T ss_pred cccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce------EEEeccCCC----CCccccccCHHHHHHH
Confidence 677888899988899999999999999999999999986433211 111111111 11111 3345577888
Q ss_pred hhcCCCCCCCCCCHHHHHHH
Q 005177 682 LLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 682 ~~Cl~~~p~~RPs~~evl~~ 701 (710)
..|++.+|+.||++.+++++
T Consensus 244 ~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 244 EACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred HHHhhcCcccCcCHHHHhhh
Confidence 89999999999999998864
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=287.41 Aligned_cols=232 Identities=16% Similarity=0.176 Sum_probs=188.1
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
+|. ....+|.|+||.|..++. .+|..+|+|.++... .+.+....|..+|+.+.||.+|++.+-|.+.+..|||
T Consensus 45 dfe--~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 45 DFE--RLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhh--heeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 466 677899999999999985 678999999998753 2355577899999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
|||.+||.|+.+++. ..+.+....+|.||+.|++|||+. .|++||+||+|||||.+|..||+|||+|+..... .
T Consensus 123 meyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r-T 198 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR-T 198 (355)
T ss_pred EeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecCc-E
Confidence 999999999999997 567778889999999999999999 9999999999999999999999999999987644 2
Q ss_pred CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 598 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 598 ~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
-..++++-|.+||+..+..++.++|.|||||++|||+.|..||.+..... ...++.... ...++.. ...+
T Consensus 199 ~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~------iY~KI~~~~-v~fP~~f---s~~~ 268 (355)
T KOG0616|consen 199 WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQ------IYEKILEGK-VKFPSYF---SSDA 268 (355)
T ss_pred EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHH------HHHHHHhCc-ccCCccc---CHHH
Confidence 23336666888999999999999999999999999999999998655421 122232222 2212222 2334
Q ss_pred HHHHhhcCCCCCCCC
Q 005177 678 LDVALLCTRSTPSDR 692 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~R 692 (710)
.+++...++.|-++|
T Consensus 269 kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 269 KDLLKKLLQVDLTKR 283 (355)
T ss_pred HHHHHHHHhhhhHhh
Confidence 456666666677777
|
|
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-35 Score=318.13 Aligned_cols=243 Identities=13% Similarity=0.117 Sum_probs=184.1
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++.+++|||||++++++.+++..++||||++
T Consensus 5 ~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~ 84 (381)
T cd05626 5 KIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 84 (381)
T ss_pred EEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCC
Confidence 667899999999999975 678999999997532 234568889999999999999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC------
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD------ 596 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~------ 596 (710)
+|+|.+++.. ..++.....++.|++.||+|||.. +|+||||||+|||++.++.+||+|||+++......
T Consensus 85 gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~ 161 (381)
T cd05626 85 GGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQ 161 (381)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccccc
Confidence 9999999865 457777888999999999999998 99999999999999999999999999975321000
Q ss_pred -------------------------------------------CCCcccccccCchhhhhccCCccccceeeHHHHHHHH
Q 005177 597 -------------------------------------------GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEI 633 (710)
Q Consensus 597 -------------------------------------------~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~El 633 (710)
.....++..|.+||......++.++|||||||++|||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~el 241 (381)
T cd05626 162 KGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEM 241 (381)
T ss_pred ccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHH
Confidence 0001234457788988878889999999999999999
Q ss_pred HhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhh--cCCCCCCCCCCHHHHHHH
Q 005177 634 LTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL--CTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 634 ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--Cl~~~p~~RPs~~evl~~ 701 (710)
+||+.||......... ........... ..... ....++.+++.+ |+..+|.+||++.|++++
T Consensus 242 ltG~~Pf~~~~~~~~~--~~i~~~~~~~~-~~~~~---~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 242 LVGQPPFLAPTPTETQ--LKVINWENTLH-IPPQV---KLSPEAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred HhCCCCCcCCCHHHHH--HHHHccccccC-CCCCC---CCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 9999998743321100 00000000000 11000 112344455544 677778889999999864
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=299.71 Aligned_cols=244 Identities=20% Similarity=0.287 Sum_probs=191.6
Q ss_pred hhhhhcCCCCCccEEEEcC-CC---cEEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVLP-TG---ITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~-~g---~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
..+.+|+|++|.||+|... ++ ..+|||.++.. ....+.+..|++++++++||||+++.+++.+.+..++||||+
T Consensus 9 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (268)
T cd05063 9 KQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYM 88 (268)
T ss_pred EeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcC
Confidence 6788999999999999863 33 37999998754 233567889999999999999999999999999999999999
Q ss_pred CCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCc
Q 005177 524 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFP 600 (710)
Q Consensus 524 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~ 600 (710)
++|+|.++++. .+++.++..++.|++.|++|||+. +|+||||||+||++++++.+|++|||++...........
T Consensus 89 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 165 (268)
T cd05063 89 ENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTY 165 (268)
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceecccccccce
Confidence 99999999864 468999999999999999999998 999999999999999999999999999875532211110
Q ss_pred ----c-cccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 601 ----A-KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 601 ----~-~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
. ....+.+||+.....++.++|||||||++|||+| |+.|+...... . ....+....... ...+..
T Consensus 166 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~-~-----~~~~i~~~~~~~---~~~~~~ 236 (268)
T cd05063 166 TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH-E-----VMKAINDGFRLP---APMDCP 236 (268)
T ss_pred eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH-H-----HHHHHhcCCCCC---CCCCCC
Confidence 0 1123677888877788999999999999999998 88888633211 0 011111111011 111223
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
..+.+++.+|++.+|++||+|.+|++.|+++
T Consensus 237 ~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 237 SAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 5678999999999999999999999999765
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-35 Score=305.60 Aligned_cols=247 Identities=20% Similarity=0.260 Sum_probs=180.3
Q ss_pred hhhhhcCCCCCccEEEEc--CCCcEEEEEEeeccch---hHHHHHHHHHHHhc---cCCCCceeEEEEEEc-----CCce
Q 005177 450 ECEEAARPQSAAGCKAVL--PTGITVSVKKIEWGAT---RIKIVSEFITRIGT---VRHKNLIRLLGFCYN-----RHQA 516 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~--~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~---l~H~niv~l~g~~~~-----~~~~ 516 (710)
..+.||+|+||.||+|.. .+|..||||+++.... ....+.+|++++++ ++||||++++++|.. ....
T Consensus 5 ~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~ 84 (290)
T cd07862 5 CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKL 84 (290)
T ss_pred eeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcE
Confidence 668899999999999985 3578899999875321 23345566666655 479999999999863 3468
Q ss_pred eEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccc
Q 005177 517 YLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 592 (710)
Q Consensus 517 ~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~ 592 (710)
++||||++ |+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 85 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T cd07862 85 TLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY 160 (290)
T ss_pred EEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccccceEec
Confidence 99999997 699988864 367889999999999999999998 9999999999999999999999999998765
Q ss_pred cccCC-CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCC---------------cccccc-cc
Q 005177 593 QLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKPIDG-LL 655 (710)
Q Consensus 593 ~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~---------------~~~~~~-~~ 655 (710)
..... ....+..+|.+||......++.++|||||||++|||++|+.|+.+..... .|+... ..
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 240 (290)
T cd07862 161 SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP 240 (290)
T ss_pred cCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhccc
Confidence 43211 11223445778888877788999999999999999999999887443211 000000 00
Q ss_pred cccccccccCCC-cchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 656 GEMYNENEVGSS-SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 656 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
............ ....+....+.+++.+|++.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 241 RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred chhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 000100000000 000112245678999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=299.64 Aligned_cols=242 Identities=23% Similarity=0.303 Sum_probs=186.0
Q ss_pred hhhcCCCCCccEEEEcC-CCc--EEEEEEeecc--chhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 452 EEAARPQSAAGCKAVLP-TGI--TVSVKKIEWG--ATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~~-~g~--~vAvK~l~~~--~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
+.+|+|+||.||+|... +|. .+|+|.++.. ....+.+.+|++++.++ +||||++++++|...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 36899999999999864 443 5789988743 23356788999999999 799999999999999999999999999
Q ss_pred CChhhhhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccC
Q 005177 526 GNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG 587 (710)
Q Consensus 526 gsL~~~l~~------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG 587 (710)
|+|.++++. .+++.++..++.|++.|++|||+. +++||||||+||++++++.+|++|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCCC
Confidence 999999864 246888999999999999999998 99999999999999999999999999
Q ss_pred ccccccccCCCC-cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccC
Q 005177 588 FKYLTQLADGSF-PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVG 665 (710)
Q Consensus 588 la~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (710)
+++......... ......+.+||+.....++.++|||||||++|||+| |+.|+.+.... . ....+.......
T Consensus 158 l~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-~-----~~~~~~~~~~~~ 231 (270)
T cd05047 158 LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-E-----LYEKLPQGYRLE 231 (270)
T ss_pred CccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH-H-----HHHHHhCCCCCC
Confidence 986332111111 111223667888877888999999999999999997 88887532211 0 001110100000
Q ss_pred CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 666 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 666 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
.+ ......+.+++.+|++.+|.+|||+.|+++.|+++
T Consensus 232 ~~---~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 232 KP---LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 268 (270)
T ss_pred CC---CcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence 01 11224577999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=297.26 Aligned_cols=242 Identities=18% Similarity=0.239 Sum_probs=191.3
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.+|+|++|.||+|...++..||+|.++......+.+.+|+.++++++|||++++++++. ++..++||||+++|+|.
T Consensus 10 ~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~ 88 (260)
T cd05070 10 LIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSKGSLL 88 (260)
T ss_pred hhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCCCcHH
Confidence 66889999999999999888889999999875555677899999999999999999999885 46689999999999999
Q ss_pred hhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCc---cc
Q 005177 530 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFP---AK 602 (710)
Q Consensus 530 ~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~---~~ 602 (710)
++++. ..++.++.+++.|++.||+|||+. +|+||||||+||++++++.++++|||+++.......... ..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 165 (260)
T cd05070 89 DFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKF 165 (260)
T ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCCCC
Confidence 99864 368999999999999999999998 999999999999999999999999999876532211111 11
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHH
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 681 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 681 (710)
...+.+||+.....++.++|||||||++|||++ |+.|+.+.... . ....+....... ...+....+.+++
T Consensus 166 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~-~-----~~~~~~~~~~~~---~~~~~~~~~~~li 236 (260)
T cd05070 166 PIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR-E-----VLEQVERGYRMP---CPQDCPISLHELM 236 (260)
T ss_pred CccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH-H-----HHHHHHcCCCCC---CCCcCCHHHHHHH
Confidence 123667888777788999999999999999999 67777532211 0 011111110011 1112234678899
Q ss_pred hhcCCCCCCCCCCHHHHHHHHhc
Q 005177 682 LLCTRSTPSDRPSMEEALKLLSG 704 (710)
Q Consensus 682 ~~Cl~~~p~~RPs~~evl~~L~~ 704 (710)
.+|++.+|++|||++++.+.|+.
T Consensus 237 ~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 237 LQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HHHcccCcccCcCHHHHHHHHhc
Confidence 99999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-35 Score=303.90 Aligned_cols=245 Identities=17% Similarity=0.152 Sum_probs=188.7
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.+|+|+||.||+|.. .++..||+|.+... ....+.+.+|++++.+++||||+++++++..++..++||||+++|
T Consensus 5 ~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 84 (279)
T cd06619 5 YQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGG 84 (279)
T ss_pred heeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCC
Confidence 567899999999999985 67899999998754 233567889999999999999999999999999999999999999
Q ss_pred ChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCccccccc
Q 005177 527 NLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWT 606 (710)
Q Consensus 527 sL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~ 606 (710)
+|..+. ..++.....++.|++.||+|||+. +|+|+||||+||+++.++.+||+|||++............+...+
T Consensus 85 ~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y 159 (279)
T cd06619 85 SLDVYR--KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGTNAY 159 (279)
T ss_pred ChHHhh--cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCCChhh
Confidence 997653 467888889999999999999998 999999999999999999999999999875432221222233346
Q ss_pred CchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc-ccccccccccccCCCcchHHHHHHHHHHHhhcC
Q 005177 607 ESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GLLGEMYNENEVGSSSSLQDEIKLVLDVALLCT 685 (710)
Q Consensus 607 ~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl 685 (710)
.+||+.....++.++|||||||++|||+||+.|+............ .....+.++.....+ .......+.+++.+|+
T Consensus 160 ~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l 237 (279)
T cd06619 160 MAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLP--VGQFSEKFVHFITQCM 237 (279)
T ss_pred cCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCC--CCcCCHHHHHHHHHHh
Confidence 6788887778899999999999999999999998642221111110 111111111101000 1112345778899999
Q ss_pred CCCCCCCCCHHHHHHH
Q 005177 686 RSTPSDRPSMEEALKL 701 (710)
Q Consensus 686 ~~~p~~RPs~~evl~~ 701 (710)
+.+|++||+++|++++
T Consensus 238 ~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 238 RKQPKERPAPENLMDH 253 (279)
T ss_pred hCChhhCCCHHHHhcC
Confidence 9999999999999875
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=296.47 Aligned_cols=240 Identities=15% Similarity=0.171 Sum_probs=184.6
Q ss_pred hhcCCCCCccEEEEc---CCCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 453 EAARPQSAAGCKAVL---PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~---~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
.||+|+||.||+|+. .++..||||.+..... ..+.+.+|++++++++||||++++++|. .+..++||||+++|+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 389999999999975 3466799999976432 2466889999999999999999999985 457899999999999
Q ss_pred hhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC---cc
Q 005177 528 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---PA 601 (710)
Q Consensus 528 L~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~---~~ 601 (710)
|.+++.. ..++.++.+++.|+++||+|||+. +++||||||+||+++.++.+|++|||+++......... ..
T Consensus 81 L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05115 81 LNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSA 157 (257)
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCC
Confidence 9999864 568899999999999999999998 99999999999999999999999999987543221111 11
Q ss_pred --cccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHH
Q 005177 602 --KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 678 (710)
Q Consensus 602 --~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (710)
....+.+||......++.++|||||||++||+++ |+.|+...... .. ...+........+. ....++.
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~~-----~~~~~~~~~~~~~~---~~~~~l~ 228 (257)
T cd05115 158 GKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP-EV-----MSFIEQGKRLDCPA---ECPPEMY 228 (257)
T ss_pred CCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH-HH-----HHHHHCCCCCCCCC---CCCHHHH
Confidence 1123567788777778899999999999999997 88887643211 00 00000000000011 1234567
Q ss_pred HHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 679 DVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 679 ~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
+++.+||..+|++||++.+|.+.|+.+
T Consensus 229 ~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 229 ALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 899999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=301.01 Aligned_cols=243 Identities=17% Similarity=0.224 Sum_probs=190.6
Q ss_pred hhhhhcCCCCCccEEEEcC------CCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVLP------TGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~------~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
..+.+|+|+||.||+|... ++..||||.++.... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus 9 ~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 88 (280)
T cd05049 9 LKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFE 88 (280)
T ss_pred HHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEe
Confidence 6788999999999999863 357899999986433 35688999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhc----------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcc
Q 005177 522 YLPNGNLSEKIRT----------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 585 (710)
Q Consensus 522 y~~~gsL~~~l~~----------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~D 585 (710)
|+++|+|.++++. .+++.+...++.|++.|++|||+. +|+||||||+||+++.++.+|++|
T Consensus 89 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~kl~d 165 (280)
T cd05049 89 YMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLVVKIGD 165 (280)
T ss_pred cCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCeEEECC
Confidence 9999999999864 246788899999999999999998 999999999999999999999999
Q ss_pred cCccccccccCC----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccccc
Q 005177 586 FGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYN 660 (710)
Q Consensus 586 fGla~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 660 (710)
||+++....... ........+.+||+.....++.++|||||||++|||++ |+.|+....... ....+..
T Consensus 166 ~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~------~~~~~~~ 239 (280)
T cd05049 166 FGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE------VIECITQ 239 (280)
T ss_pred cccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH------HHHHHHc
Confidence 999875422111 01111223677888888889999999999999999999 888876432111 0011111
Q ss_pred ccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhc
Q 005177 661 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 704 (710)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~ 704 (710)
......+ ......+.+++.+||+.||++||++.||++.|++
T Consensus 240 ~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 240 GRLLQRP---RTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred CCcCCCC---CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 1100001 1123467789999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=303.22 Aligned_cols=245 Identities=20% Similarity=0.247 Sum_probs=188.9
Q ss_pred hhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
..+.+|+|+||.||+|.. ..+..||+|.+.... ...+.+.+|+.++++++|||||+++++|..++..++|||
T Consensus 4 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (290)
T cd05045 4 LGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVE 83 (290)
T ss_pred ccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEE
Confidence 568899999999999974 234679999887543 235678889999999999999999999999999999999
Q ss_pred ecCCCChhhhhhc--------------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe
Q 005177 522 YLPNGNLSEKIRT--------------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 575 (710)
Q Consensus 522 y~~~gsL~~~l~~--------------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl 575 (710)
|+++|+|.+++.. .+++.+...++.|++.||+|||+. +|+||||||+||++
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~nill 160 (290)
T cd05045 84 YAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARNVLV 160 (290)
T ss_pred ecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---CeehhhhhhheEEE
Confidence 9999999998753 256788899999999999999988 99999999999999
Q ss_pred cCCCceEEcccCccccccccCC----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccc
Q 005177 576 DENMEPHLAEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKP 650 (710)
Q Consensus 576 ~~~~~~kl~DfGla~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~ 650 (710)
++++.+||+|||+++....... ........+.+||......++.++|||||||++|||+| |+.|+.+......+.
T Consensus 161 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~ 240 (290)
T cd05045 161 AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFN 240 (290)
T ss_pred cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 9999999999999875432111 11111223567787777778899999999999999999 887775322111000
Q ss_pred ccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 651 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
......... .+ ......+.+++.+|++.+|++||++.|+++.|+++-
T Consensus 241 ---~~~~~~~~~---~~---~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~ 287 (290)
T cd05045 241 ---LLKTGYRME---RP---ENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM 287 (290)
T ss_pred ---HHhCCCCCC---CC---CCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence 000100000 01 112346778999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-35 Score=316.99 Aligned_cols=246 Identities=14% Similarity=0.082 Sum_probs=189.1
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
+|. ..+.||+|+||.||++.. .+|+.||+|.+.... ...+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 44 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 44 DFD--VIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HcE--EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 455 678899999999999985 578999999997532 2345578899999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-
Q 005177 520 YDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 597 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~- 597 (710)
|||+++|+|.++++. ..+......++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 122 ~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~ 198 (370)
T cd05596 122 MEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMV 198 (370)
T ss_pred EcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcc
Confidence 999999999999876 456777888999999999999998 999999999999999999999999999876532211
Q ss_pred --CCcccccccCchhhhhcc----CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchH
Q 005177 598 --SFPAKIAWTESGEFYNAM----KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 671 (710)
Q Consensus 598 --~~~~~~~~~~~~e~~~~~----~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (710)
....++..|.+||..... .++.++|||||||++|||+||+.||.+..... ...++.+.......+...
T Consensus 199 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~------~~~~i~~~~~~~~~~~~~ 272 (370)
T cd05596 199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG------TYSKIMDHKNSLTFPDDI 272 (370)
T ss_pred cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH------HHHHHHcCCCcCCCCCcC
Confidence 112244456778876543 37789999999999999999999987543211 111111111000011111
Q ss_pred HHHHHHHHHHhhcCCCCCCC--CCCHHHHHHH
Q 005177 672 DEIKLVLDVALLCTRSTPSD--RPSMEEALKL 701 (710)
Q Consensus 672 ~~~~~~~~l~~~Cl~~~p~~--RPs~~evl~~ 701 (710)
.....+.+++.+|+..+|++ ||++.|++++
T Consensus 273 ~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 273 EISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred CCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 12346678889999999988 9999999764
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=297.14 Aligned_cols=238 Identities=16% Similarity=0.182 Sum_probs=184.6
Q ss_pred hhcCCCCCccEEEEc---CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 453 EAARPQSAAGCKAVL---PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~---~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
.+|+|+||.||+|.. .++..+|+|.++... ...+.+.+|+.++++++||||++++|++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 589999999999964 467899999987542 23567889999999999999999999985 45679999999999
Q ss_pred Chhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC----Cc
Q 005177 527 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS----FP 600 (710)
Q Consensus 527 sL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~----~~ 600 (710)
+|.+++.. ..++....+++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++........ ..
T Consensus 81 ~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05116 81 PLNKFLQKNKHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTH 157 (257)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCC
Confidence 99999865 468889999999999999999998 9999999999999999999999999998765322211 00
Q ss_pred c-cccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccc-cCCCcchHHHHHHH
Q 005177 601 A-KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENE-VGSSSSLQDEIKLV 677 (710)
Q Consensus 601 ~-~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 677 (710)
. ....+.+||......++.++|||||||++|||+| |+.|+.+..... . .+.+.... ...+. .....+
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-~------~~~i~~~~~~~~~~---~~~~~l 227 (257)
T cd05116 158 GKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE-V------TQMIESGERMECPQ---RCPPEM 227 (257)
T ss_pred CCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-H------HHHHHCCCCCCCCC---CCCHHH
Confidence 0 1123556787777778889999999999999998 888876432111 0 00111110 01111 123456
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHHHhc
Q 005177 678 LDVALLCTRSTPSDRPSMEEALKLLSG 704 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs~~evl~~L~~ 704 (710)
.+++.+||+.||++||+|.+|++.|++
T Consensus 228 ~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 228 YDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred HHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 789999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-35 Score=309.21 Aligned_cols=241 Identities=15% Similarity=0.135 Sum_probs=184.2
Q ss_pred hhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 453 EAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
.||+|+||.||++.. .+|+.||||.++... ...+.+.+|+.++.++ +||||+++++++.+++..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g 81 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGG 81 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 589999999999985 578999999998632 2245577888988888 6999999999999999999999999999
Q ss_pred Chhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--CCccc
Q 005177 527 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAK 602 (710)
Q Consensus 527 sL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--~~~~~ 602 (710)
+|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....+
T Consensus 82 ~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (329)
T cd05588 82 DLMFHMQRQRKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCG 158 (329)
T ss_pred CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccC
Confidence 99998854 578899999999999999999998 999999999999999999999999999874221111 11123
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCC--cccccccc-cccccccccCCCcchHHHHHHHHH
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ--NKPIDGLL-GEMYNENEVGSSSSLQDEIKLVLD 679 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 679 (710)
...|.+||+.....++.++|||||||++|||+||+.|+....... ........ ..+.... ...+.. ....+.+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~---~~~~~~~ 234 (329)
T cd05588 159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ-IRIPRS---LSVKASS 234 (329)
T ss_pred CccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC-CCCCCC---CCHHHHH
Confidence 444678898888888999999999999999999999986321110 00000001 1111111 111111 2345678
Q ss_pred HHhhcCCCCCCCCCC------HHHHHH
Q 005177 680 VALLCTRSTPSDRPS------MEEALK 700 (710)
Q Consensus 680 l~~~Cl~~~p~~RPs------~~evl~ 700 (710)
++.+|++.||++||+ ++|+++
T Consensus 235 li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 235 VLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred HHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 899999999999997 677764
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-35 Score=310.43 Aligned_cols=236 Identities=17% Similarity=0.156 Sum_probs=183.7
Q ss_pred hhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 453 EAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
.||+|+||.||+|.. .+|+.||||.++... ...+.+..|.+++..+ +||||+++++++.+++..|+||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 81 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGG 81 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCC
Confidence 589999999999985 568899999998632 2244566788888755 7999999999999999999999999999
Q ss_pred Chhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Cccc
Q 005177 527 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAK 602 (710)
Q Consensus 527 sL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~~ 602 (710)
+|.+.+.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ ...+
T Consensus 82 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (321)
T cd05591 82 DLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCG 158 (321)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCCcccccccc
Confidence 99998865 467888899999999999999998 9999999999999999999999999998753211111 1123
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
...|.+||+.....++.++|||||||++|||+||+.|+....... ....+.... ...+.. ....+.+++.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~------~~~~i~~~~-~~~p~~---~~~~~~~ll~ 228 (321)
T cd05591 159 TPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD------LFESILHDD-VLYPVW---LSKEAVSILK 228 (321)
T ss_pred CccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH------HHHHHHcCC-CCCCCC---CCHHHHHHHH
Confidence 445778898888888999999999999999999999987433211 111111111 111111 1245678889
Q ss_pred hcCCCCCCCCC-------CHHHHHHH
Q 005177 683 LCTRSTPSDRP-------SMEEALKL 701 (710)
Q Consensus 683 ~Cl~~~p~~RP-------s~~evl~~ 701 (710)
+|++.||++|| ++++++++
T Consensus 229 ~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 229 AFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred HHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 99999999999 77777653
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=296.49 Aligned_cols=242 Identities=19% Similarity=0.251 Sum_probs=192.5
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.+|+|++|.||+|.. .|+.||||.++......+.+.+|+.++++++|+||+++++++.+++..++||||+++|+|.
T Consensus 10 ~~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~ 88 (256)
T cd05039 10 LGATIGKGEFGDVMLGDY-RGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLV 88 (256)
T ss_pred ceeeeecCCCceEEEEEe-cCcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHH
Confidence 668899999999999986 4788999999876555677889999999999999999999999999999999999999999
Q ss_pred hhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCcccccc
Q 005177 530 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAW 605 (710)
Q Consensus 530 ~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 605 (710)
+++.. ..+|.....++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++........ ......
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~ 164 (256)
T cd05039 89 DYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDS-GKLPVK 164 (256)
T ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEccccccccccccccc-CCCccc
Confidence 99865 468999999999999999999998 9999999999999999999999999998765322211 111223
Q ss_pred cCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhc
Q 005177 606 TESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 684 (710)
Q Consensus 606 ~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 684 (710)
+.+||+.....++.++||||||+++|||++ |+.|+..... .. . . +........ .........+.+++.+|
T Consensus 165 ~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-~~-~----~-~~~~~~~~~--~~~~~~~~~~~~li~~~ 235 (256)
T cd05039 165 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-KD-V----V-PHVEKGYRM--EAPEGCPPEVYKVMKDC 235 (256)
T ss_pred ccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH-HH-H----H-HHHhcCCCC--CCccCCCHHHHHHHHHH
Confidence 567787777778889999999999999998 8777653211 00 0 0 000000000 00111235677899999
Q ss_pred CCCCCCCCCCHHHHHHHHhcc
Q 005177 685 TRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 685 l~~~p~~RPs~~evl~~L~~~ 705 (710)
+..+|++||++.|++++|+.+
T Consensus 236 l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 236 WELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred hccChhhCcCHHHHHHHHhcC
Confidence 999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=299.01 Aligned_cols=245 Identities=16% Similarity=0.188 Sum_probs=188.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
....+|+|+||.||+|+. .+|+.||+|++.... ...+.+.+|+.++.+++||||+++++++..++..++||||+++|+
T Consensus 13 ~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~ 92 (267)
T cd06646 13 LIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGS 92 (267)
T ss_pred hhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCc
Confidence 778999999999999985 678999999997543 234567889999999999999999999999999999999999999
Q ss_pred hhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--CCcccc
Q 005177 528 LSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAKI 603 (710)
Q Consensus 528 L~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--~~~~~~ 603 (710)
|.++++. ..++.....++.|+++|++|||+. +|+|||+||+||+++.++.+||+|||+++....... ....+.
T Consensus 93 L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 169 (267)
T cd06646 93 LQDIYHVTGPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFIGT 169 (267)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeecccccccCccccC
Confidence 9999864 567888999999999999999998 999999999999999999999999999875432211 111123
Q ss_pred cccCchhhhh---ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHH
Q 005177 604 AWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 680 (710)
Q Consensus 604 ~~~~~~e~~~---~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 680 (710)
..+.+||... ...++.++|||||||++|||++|+.|+........... .......+.... ........+.++
T Consensus 170 ~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~l 244 (267)
T cd06646 170 PYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFL--MSKSNFQPPKLK---DKTKWSSTFHNF 244 (267)
T ss_pred ccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhee--eecCCCCCCCCc---cccccCHHHHHH
Confidence 3466777653 34467789999999999999999999864322111000 000000110010 011223567789
Q ss_pred HhhcCCCCCCCCCCHHHHHHHH
Q 005177 681 ALLCTRSTPSDRPSMEEALKLL 702 (710)
Q Consensus 681 ~~~Cl~~~p~~RPs~~evl~~L 702 (710)
+.+|++.+|++||+++++++.|
T Consensus 245 i~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 245 VKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred HHHHhhCChhhCcCHHHHhcCC
Confidence 9999999999999999998754
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=299.66 Aligned_cols=244 Identities=19% Similarity=0.275 Sum_probs=187.1
Q ss_pred hhhhhcCCCCCccEEEEcC----CCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCc------e
Q 005177 450 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ------A 516 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~----~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~------~ 516 (710)
..+.+|+|+||.||+|... .+..||||+++... .....+.+|++.+++++||||+++++++.+.+. .
T Consensus 3 ~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 82 (273)
T cd05035 3 LGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKP 82 (273)
T ss_pred cccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCccc
Confidence 5678999999999999853 34789999998542 234578899999999999999999999876554 7
Q ss_pred eEEEeecCCCChhhhhhc--------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCc
Q 005177 517 YLLYDYLPNGNLSEKIRT--------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 588 (710)
Q Consensus 517 ~lv~Ey~~~gsL~~~l~~--------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl 588 (710)
++||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 83 ~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~ 159 (273)
T cd05035 83 MVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADFGL 159 (273)
T ss_pred EEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCccc
Confidence 999999999999988843 357888899999999999999998 999999999999999999999999999
Q ss_pred cccccccCCCC----cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccc
Q 005177 589 KYLTQLADGSF----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENE 663 (710)
Q Consensus 589 a~~~~~~~~~~----~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 663 (710)
++......... ......+.+||......++.++|||||||++|||++ |..|+.+.... . ......+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~-~-----~~~~~~~~~~ 233 (273)
T cd05035 160 SKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH-E-----IYDYLRHGNR 233 (273)
T ss_pred eeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH-H-----HHHHHHcCCC
Confidence 87653221110 111122456677777778899999999999999999 66766532211 1 1111111110
Q ss_pred cCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 664 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 664 ~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
...+ ......+.+++.+|++.||++|||+.|+++.|+++
T Consensus 234 ~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 234 LKQP---EDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCCC---cCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1111 12335678899999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=315.61 Aligned_cols=242 Identities=15% Similarity=0.097 Sum_probs=187.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||++.. .+|+.||||.++.... ..+.+.+|+++++.++||||+++++++.+++..++||||++
T Consensus 5 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 84 (330)
T cd05601 5 VKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQP 84 (330)
T ss_pred EEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCC
Confidence 678899999999999985 6789999999986432 35668899999999999999999999999999999999999
Q ss_pred CCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC---
Q 005177 525 NGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--- 598 (710)
Q Consensus 525 ~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--- 598 (710)
+|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 85 ~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~ 161 (330)
T cd05601 85 GGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSK 161 (330)
T ss_pred CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCCCCceeee
Confidence 9999999965 467888889999999999999998 9999999999999999999999999998765322111
Q ss_pred CcccccccCchhhhh------ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHH
Q 005177 599 FPAKIAWTESGEFYN------AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 672 (710)
Q Consensus 599 ~~~~~~~~~~~e~~~------~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (710)
...+...|.+||+.. ...++.++|||||||++|||+||+.||........ . ..+.........+....
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~--~----~~i~~~~~~~~~~~~~~ 235 (330)
T cd05601 162 LPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKT--Y----NNIMNFQRFLKFPEDPK 235 (330)
T ss_pred cccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHH--H----HHHHcCCCccCCCCCCC
Confidence 112344577888765 34567899999999999999999999875432111 0 11110000000011111
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 673 EIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
....+.+++..|+. +|++||+++++++.
T Consensus 236 ~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 236 VSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred CCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 23456678888997 99999999998753
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=298.58 Aligned_cols=244 Identities=19% Similarity=0.232 Sum_probs=184.7
Q ss_pred hhhcCCCCCccEEEEcC----CCcEEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEc-CCceeEEEeecC
Q 005177 452 EEAARPQSAAGCKAVLP----TGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYN-RHQAYLLYDYLP 524 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~~----~g~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-~~~~~lv~Ey~~ 524 (710)
+.||+|+||.||+|... ++..||+|++... ....+.+.+|+.++++++||||++++++|.. ++..++||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 36899999999999852 3468999998642 2335678889999999999999999998864 556899999999
Q ss_pred CCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC-----
Q 005177 525 NGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD----- 596 (710)
Q Consensus 525 ~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~----- 596 (710)
+|+|.+++.. ...+.....++.|+++|++|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 157 (262)
T cd05058 81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVH 157 (262)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCcceeec
Confidence 9999999865 346778889999999999999998 99999999999999999999999999987542211
Q ss_pred -CCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHH
Q 005177 597 -GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 675 (710)
Q Consensus 597 -~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (710)
.........+.+||+.....++.++|||||||++|||+||+.|+......... ............+. ....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~---~~~~ 229 (262)
T cd05058 158 NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDI-----TVYLLQGRRLLQPE---YCPD 229 (262)
T ss_pred ccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHHhcCCCCCCCC---cCCH
Confidence 00111222356778777778899999999999999999976665432221110 01111111011011 1124
Q ss_pred HHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 676 LVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 676 ~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
.+.+++.+||+.+|++||++.|+++.|+++.
T Consensus 230 ~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 230 PLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 5778999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=310.02 Aligned_cols=234 Identities=18% Similarity=0.181 Sum_probs=181.0
Q ss_pred hhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhc-cCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 453 EAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGT-VRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~-l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
.||+|+||.||+|.. .+++.||||.++... ...+.+..|..++.. .+||||+++++++.+++..++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g 81 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence 589999999999986 568899999998642 223445566777765 58999999999999999999999999999
Q ss_pred Chhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--CCccc
Q 005177 527 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAK 602 (710)
Q Consensus 527 sL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--~~~~~ 602 (710)
+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....+
T Consensus 82 ~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (316)
T cd05619 82 DLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCG 158 (316)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecC
Confidence 99999975 568889999999999999999998 999999999999999999999999999874321111 11123
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
...|.+||......++.++|||||||++|||+||+.|+....... ....+.... ...+.. ....+.+++.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~------~~~~i~~~~-~~~~~~---~~~~~~~li~ 228 (316)
T cd05619 159 TPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE------LFQSIRMDN-PCYPRW---LTREAKDILV 228 (316)
T ss_pred CccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCC-CCCCcc---CCHHHHHHHH
Confidence 445778898888888999999999999999999999986432110 011111011 011111 2235678889
Q ss_pred hcCCCCCCCCCCHH-HHH
Q 005177 683 LCTRSTPSDRPSME-EAL 699 (710)
Q Consensus 683 ~Cl~~~p~~RPs~~-evl 699 (710)
+|++.||++||++. ++.
T Consensus 229 ~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 229 KLFVREPERRLGVKGDIR 246 (316)
T ss_pred HHhccCHhhcCCChHHHH
Confidence 99999999999997 554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=298.15 Aligned_cols=243 Identities=17% Similarity=0.215 Sum_probs=190.2
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.+|+|+||.||+|...++..||+|.++......+.+.+|++++++++||||+++++++. ++..++||||+++|+|.
T Consensus 10 ~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~ 88 (262)
T cd05071 10 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLL 88 (262)
T ss_pred EeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCCCCcHH
Confidence 56789999999999998877778999999865555667899999999999999999999874 45689999999999999
Q ss_pred hhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC---ccc
Q 005177 530 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---PAK 602 (710)
Q Consensus 530 ~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~---~~~ 602 (710)
+++.. ..+|..+..++.|+++||+|+|+. +|+||||||+||++++++.+||+|||.++......... ...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~ 165 (262)
T cd05071 89 DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 165 (262)
T ss_pred HHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeeccccccccccCCcc
Confidence 99974 368899999999999999999998 99999999999999999999999999987653222111 112
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHH
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 681 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 681 (710)
...|.+||+.....++.++|||||||++|||+| |+.|+.+..... . .......... +...+....+.+++
T Consensus 166 ~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~--~----~~~~~~~~~~---~~~~~~~~~l~~li 236 (262)
T cd05071 166 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--V----LDQVERGYRM---PCPPECPESLHDLM 236 (262)
T ss_pred cceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH--H----HHHHhcCCCC---CCccccCHHHHHHH
Confidence 223667788777788999999999999999999 666664322110 0 0111000001 11122345678999
Q ss_pred hhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 682 LLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 682 ~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
.+|++.+|++||++.++++.|+..
T Consensus 237 ~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 237 CQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred HHHccCCcccCCCHHHHHHHHHHh
Confidence 999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-35 Score=305.29 Aligned_cols=245 Identities=21% Similarity=0.277 Sum_probs=187.7
Q ss_pred hhhhhcCCCCCccEEEEcC-CCc--EEEEEEeecc--chhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVLP-TGI--TVSVKKIEWG--ATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~-~g~--~vAvK~l~~~--~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
..+.||+|+||.||+|... +|. .+|+|.++.. ....+.+.+|++++.++ +||||+++++++.+.+..++||||+
T Consensus 6 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~ 85 (297)
T cd05089 6 FEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYA 85 (297)
T ss_pred eeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEec
Confidence 5678999999999999864 343 5789988742 22356788999999999 7999999999999999999999999
Q ss_pred CCCChhhhhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcc
Q 005177 524 PNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 585 (710)
Q Consensus 524 ~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~D 585 (710)
++|+|.++++. .+++.....++.|++.|++|||+. +|+||||||+||++++++.+||+|
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~d 162 (297)
T cd05089 86 PYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLASKIAD 162 (297)
T ss_pred CCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCeEEECC
Confidence 99999999864 256788899999999999999998 999999999999999999999999
Q ss_pred cCccccccccCCCCcc-cccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccc
Q 005177 586 FGFKYLTQLADGSFPA-KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENE 663 (710)
Q Consensus 586 fGla~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 663 (710)
||++............ ....+.+||+.....++.++|||||||++|||+| |+.|+....... ..........
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~------~~~~~~~~~~ 236 (297)
T cd05089 163 FGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE------LYEKLPQGYR 236 (297)
T ss_pred cCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH------HHHHHhcCCC
Confidence 9998643211111111 1223567788777788999999999999999998 888876432111 0011111000
Q ss_pred cCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 664 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 664 ~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
...+. .....+.+++.+|++.+|.+||++.++++.|+.+.
T Consensus 237 ~~~~~---~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 276 (297)
T cd05089 237 MEKPR---NCDDEVYELMRQCWRDRPYERPPFAQISVQLSRML 276 (297)
T ss_pred CCCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 00011 12245778999999999999999999999987764
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-35 Score=305.46 Aligned_cols=246 Identities=20% Similarity=0.217 Sum_probs=184.8
Q ss_pred hhhhhcCCCCCccEEEEcCC---------------CcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEc
Q 005177 450 ECEEAARPQSAAGCKAVLPT---------------GITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYN 512 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~---------------g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 512 (710)
..+.||+|+||.||++.... ...||||.++... .....+.+|++++++++||||+++++++..
T Consensus 9 ~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~ 88 (295)
T cd05097 9 LKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVS 88 (295)
T ss_pred ehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcC
Confidence 66889999999999987532 2358999987542 235578899999999999999999999999
Q ss_pred CCceeEEEeecCCCChhhhhhc--------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC
Q 005177 513 RHQAYLLYDYLPNGNLSEKIRT--------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN 578 (710)
Q Consensus 513 ~~~~~lv~Ey~~~gsL~~~l~~--------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~ 578 (710)
.+..++||||+++++|.+++.. ..+|..+.+++.|+++|++|||+. +++||||||+||+++++
T Consensus 89 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nill~~~ 165 (295)
T cd05097 89 DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNCLVGNH 165 (295)
T ss_pred CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhEEEcCC
Confidence 9999999999999999999854 247888899999999999999998 99999999999999999
Q ss_pred CceEEcccCccccccccCCCC----cccccccCchhhhhccCCccccceeeHHHHHHHHHhC--CCCCCCCCCCCccccc
Q 005177 579 MEPHLAEFGFKYLTQLADGSF----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTN--GRLTNAGSSLQNKPID 652 (710)
Q Consensus 579 ~~~kl~DfGla~~~~~~~~~~----~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg--~~p~~~~~~~~~~~~~ 652 (710)
+.+||+|||+++......... ......+.+||......++.++|||||||++|||+++ ..|+..... .. ...
T Consensus 166 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~-~~-~~~ 243 (295)
T cd05097 166 YTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD-EQ-VIE 243 (295)
T ss_pred CcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh-HH-HHH
Confidence 999999999987543211110 1112235677877777789999999999999999984 445442111 00 000
Q ss_pred ccccccccc----cccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhc
Q 005177 653 GLLGEMYNE----NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 704 (710)
Q Consensus 653 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~ 704 (710)
...+..+. ......+ .....+.+++.+|++.+|++||+|++|++.|++
T Consensus 244 -~~~~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 244 -NTGEFFRNQGRQIYLSQTP---LCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred -HHHHhhhhccccccCCCCC---CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 00000000 0000011 122467899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=297.87 Aligned_cols=242 Identities=16% Similarity=0.211 Sum_probs=189.6
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
....||+|++|.||+|....+..||+|.+..+....+.+.+|++++++++|||++++++++. .+..++||||+++|+|.
T Consensus 10 ~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~ 88 (260)
T cd05069 10 LDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGKGSLL 88 (260)
T ss_pred eeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCCCCHH
Confidence 55789999999999999877778999998865555667889999999999999999999875 46689999999999999
Q ss_pred hhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC---ccc
Q 005177 530 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---PAK 602 (710)
Q Consensus 530 ~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~---~~~ 602 (710)
++++. ..+|..+..++.|++.||+|||+. +|+||||||+||++++++.++|+|||+++......... ...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 165 (260)
T cd05069 89 DFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKF 165 (260)
T ss_pred HHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCcc
Confidence 99965 358999999999999999999998 99999999999999999999999999987653221111 111
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHH
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 681 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 681 (710)
...+.+||......++.++|||||||++|||+| |+.|+.+...... ...+...... +...+....+.+++
T Consensus 166 ~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~------~~~~~~~~~~---~~~~~~~~~~~~li 236 (260)
T cd05069 166 PIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREV------LEQVERGYRM---PCPQGCPESLHELM 236 (260)
T ss_pred chhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH------HHHHHcCCCC---CCCcccCHHHHHHH
Confidence 122567788777788999999999999999999 7777754321110 0111111000 11112335677888
Q ss_pred hhcCCCCCCCCCCHHHHHHHHhc
Q 005177 682 LLCTRSTPSDRPSMEEALKLLSG 704 (710)
Q Consensus 682 ~~Cl~~~p~~RPs~~evl~~L~~ 704 (710)
.+|++.+|++||+++++++.|++
T Consensus 237 ~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 237 KLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HHHccCCcccCcCHHHHHHHHhc
Confidence 99999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-35 Score=302.61 Aligned_cols=239 Identities=15% Similarity=0.132 Sum_probs=183.4
Q ss_pred hcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCCh
Q 005177 454 AARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 454 ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
||+|+||.||++.. .+|+.||+|.+..... ..+.+..|++++++++||||+++++++.++...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 68999999999985 5799999999975321 234556789999999999999999999999999999999999999
Q ss_pred hhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC-Ccccc
Q 005177 529 SEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-FPAKI 603 (710)
Q Consensus 529 ~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~-~~~~~ 603 (710)
.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++......... ...+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~ 157 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGT 157 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCC
Confidence 988854 467888899999999999999998 9999999999999999999999999998754322111 11233
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 683 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 683 (710)
..+.+||+.....++.++||||+||++|||++|+.|+........ ............ ... ........+.+++.+
T Consensus 158 ~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~--~~~~~~~~~~~~-~~~--~~~~~~~~~~~li~~ 232 (277)
T cd05607 158 NGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA--KEELKRRTLEDE-VKF--EHQNFTEESKDICRL 232 (277)
T ss_pred CCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh--HHHHHHHhhccc-ccc--ccccCCHHHHHHHHH
Confidence 446788888777899999999999999999999999864321110 000111111111 000 001123456789999
Q ss_pred cCCCCCCCCCCHHHHHH
Q 005177 684 CTRSTPSDRPSMEEALK 700 (710)
Q Consensus 684 Cl~~~p~~RPs~~evl~ 700 (710)
|++.||++||+++|+++
T Consensus 233 ~L~~~P~~R~~~~~~~~ 249 (277)
T cd05607 233 FLAKKPEDRLGSREKND 249 (277)
T ss_pred HhccCHhhCCCCccchh
Confidence 99999999999977654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=307.77 Aligned_cols=240 Identities=16% Similarity=0.185 Sum_probs=195.6
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCc-eeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ-AYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~-~~lv~Ey~~ 524 (710)
..+.+|+|+||.++.... .+++.+|+|.+..... .++....|+.++++++|||||.+.+.+.+++. .+||||||+
T Consensus 8 ~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~e 87 (426)
T KOG0589|consen 8 VLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCE 87 (426)
T ss_pred hhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecC
Confidence 678999999999987765 5678999999987532 35577899999999999999999999999888 999999999
Q ss_pred CCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--
Q 005177 525 NGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 598 (710)
Q Consensus 525 ~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~-- 598 (710)
||++.+.+.. ..+..+.+++..|++.|+.|||+. .|+|||||++||++..+..+|++|||+||......+.
T Consensus 88 Gg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~ 164 (426)
T KOG0589|consen 88 GGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLAS 164 (426)
T ss_pred CCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCCchhhhh
Confidence 9999999976 235566789999999999999988 9999999999999999999999999999988655322
Q ss_pred CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHH
Q 005177 599 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 678 (710)
Q Consensus 599 ~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (710)
...++++|.+||+....+|+.|+||||+||++|||++-+++|.+... .. .........+.+. ......++.
T Consensus 165 tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m-~~-Li~ki~~~~~~Pl-------p~~ys~el~ 235 (426)
T KOG0589|consen 165 TVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM-SE-LILKINRGLYSPL-------PSMYSSELR 235 (426)
T ss_pred eecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch-HH-HHHHHhhccCCCC-------CccccHHHH
Confidence 23378889999999999999999999999999999998888764331 11 1111111222222 122345666
Q ss_pred HHHhhcCCCCCCCCCCHHHHHHH
Q 005177 679 DVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 679 ~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.++..|+..+|+.||++.+++.+
T Consensus 236 ~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 236 SLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred HHHHHHhhcCCccCCCHHHHhhC
Confidence 78889999999999999999875
|
|
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=305.04 Aligned_cols=245 Identities=22% Similarity=0.288 Sum_probs=187.3
Q ss_pred hhhhhcCCCCCccEEEEc-CCCc--EEEEEEeecc--chhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGI--TVSVKKIEWG--ATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~--~vAvK~l~~~--~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
..+.+|+|+||.||+|.. .+|. .+|+|+++.. ....+.+.+|++++.++ +||||+++++++.+++..++||||+
T Consensus 11 ~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 90 (303)
T cd05088 11 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 90 (303)
T ss_pred eeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeC
Confidence 567899999999999985 3454 4688887643 22356788899999999 8999999999999999999999999
Q ss_pred CCCChhhhhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcc
Q 005177 524 PNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 585 (710)
Q Consensus 524 ~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~D 585 (710)
++|+|.++++. .+++.++..++.|++.|++|||+. +|+||||||+|||+++++.+||+|
T Consensus 91 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~~kl~d 167 (303)
T cd05088 91 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIAD 167 (303)
T ss_pred CCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCcEEeCc
Confidence 99999999864 246788899999999999999998 999999999999999999999999
Q ss_pred cCccccccccCCCCcc-cccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccc
Q 005177 586 FGFKYLTQLADGSFPA-KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENE 663 (710)
Q Consensus 586 fGla~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 663 (710)
||+++........... ....+.+||+.....++.++|||||||++|||+| |+.|+...... . ..........
T Consensus 168 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~-----~~~~~~~~~~ 241 (303)
T cd05088 168 FGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-E-----LYEKLPQGYR 241 (303)
T ss_pred cccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH-H-----HHHHHhcCCc
Confidence 9998643211111111 1122567788777778899999999999999998 88887532211 0 0011111000
Q ss_pred cCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 664 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 664 ~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
...+ ......+.+++.+|++.+|++||++++++++|+++-
T Consensus 242 ~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~ 281 (303)
T cd05088 242 LEKP---LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 281 (303)
T ss_pred CCCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0001 112245678999999999999999999999987764
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=300.63 Aligned_cols=235 Identities=17% Similarity=0.234 Sum_probs=176.8
Q ss_pred hhcCCCCCccEEEEcC-------------------------CCcEEEEEEeeccchh-HHHHHHHHHHHhccCCCCceeE
Q 005177 453 EAARPQSAAGCKAVLP-------------------------TGITVSVKKIEWGATR-IKIVSEFITRIGTVRHKNLIRL 506 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~~-------------------------~g~~vAvK~l~~~~~~-~~~~~~e~~~l~~l~H~niv~l 506 (710)
.||+|+||.||+|... ....||+|.+...... ...+.+|++++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 5899999999999741 1246899998754332 4567888999999999999999
Q ss_pred EEEEEcCCceeEEEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC----
Q 005177 507 LGFCYNRHQAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM---- 579 (710)
Q Consensus 507 ~g~~~~~~~~~lv~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~---- 579 (710)
+|+|.+++..++||||+++|+|.+++.. ..++..+.+++.|+++||+|||+. +|+||||||+||+++.++
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~~~~~ 158 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLGLAEG 158 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccCcccC
Confidence 9999999999999999999999999864 468899999999999999999998 999999999999998643
Q ss_pred ---ceEEcccCccccccccCCCCcccccccCchhhhhc-cCCccccceeeHHHHHHHHH-hCCCCCCCCCCCCccccccc
Q 005177 580 ---EPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEIL-TNGRLTNAGSSLQNKPIDGL 654 (710)
Q Consensus 580 ---~~kl~DfGla~~~~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Ell-tg~~p~~~~~~~~~~~~~~~ 654 (710)
.+|++|||++....... ....... +.+||.... ..++.++|||||||++|||+ +|+.|+........
T Consensus 159 ~~~~~kl~d~g~~~~~~~~~-~~~~~~~-~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~------ 230 (274)
T cd05076 159 TSPFIKLSDPGVSFTALSRE-ERVERIP-WIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK------ 230 (274)
T ss_pred ccceeeecCCcccccccccc-ccccCCc-ccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH------
Confidence 37999999875432211 1112334 455665543 56788999999999999995 67777753321110
Q ss_pred ccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHh
Q 005177 655 LGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 703 (710)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~ 703 (710)
....... ...+.. ....+.+++.+||+.+|++||+|.++++.|+
T Consensus 231 -~~~~~~~-~~~~~~---~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 231 -ERFYEKK-HRLPEP---SCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred -HHHHHhc-cCCCCC---CChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 0111111 000111 1235778999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=296.38 Aligned_cols=242 Identities=19% Similarity=0.265 Sum_probs=191.8
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.||+|+||.||+|...+++.||+|.+.........+.+|+.++++++||||+++++++. .+..++||||+++|+|.
T Consensus 10 ~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~ 88 (260)
T cd05067 10 LVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYMENGSLV 88 (260)
T ss_pred eeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCCCCCHH
Confidence 56789999999999999989999999999876666778899999999999999999999874 56789999999999999
Q ss_pred hhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC---ccc
Q 005177 530 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---PAK 602 (710)
Q Consensus 530 ~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~---~~~ 602 (710)
+++.. ..++.++..++.|++.||+|||+. +++||||||+||++++++.++++|||+++......... ...
T Consensus 89 ~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 165 (260)
T cd05067 89 DFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKF 165 (260)
T ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCcc
Confidence 99864 468889999999999999999998 99999999999999999999999999987654211111 111
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHH
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 681 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 681 (710)
...+.+||+.....++.++|||||||++|||++ |+.|+.+...... ...+.+......+. .....+.+++
T Consensus 166 ~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~------~~~~~~~~~~~~~~---~~~~~~~~li 236 (260)
T cd05067 166 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEV------IQNLERGYRMPRPD---NCPEELYELM 236 (260)
T ss_pred cccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHH------HHHHHcCCCCCCCC---CCCHHHHHHH
Confidence 223677888877788899999999999999999 8888764321110 00000000001011 1224578899
Q ss_pred hhcCCCCCCCCCCHHHHHHHHhc
Q 005177 682 LLCTRSTPSDRPSMEEALKLLSG 704 (710)
Q Consensus 682 ~~Cl~~~p~~RPs~~evl~~L~~ 704 (710)
.+|++.+|++||+++++.+.|+.
T Consensus 237 ~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 237 RLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HHHccCChhhCCCHHHHHHHhhc
Confidence 99999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=301.13 Aligned_cols=243 Identities=19% Similarity=0.207 Sum_probs=188.2
Q ss_pred hhhhhcCCCCCccEEEEcC------CCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVLP------TGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~------~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
..+.+|+|+||.||+|... ++..||||+++.... ..+.+.+|+.++++++|||||++++++.+.+..++++|
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e 88 (283)
T cd05091 9 FMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFS 88 (283)
T ss_pred HHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEE
Confidence 6788999999999999852 357899999985432 24568889999999999999999999999999999999
Q ss_pred ecCCCChhhhhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEE
Q 005177 522 YLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 583 (710)
Q Consensus 522 y~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl 583 (710)
|+++++|.+++.. .+++..+.+++.|+++||+|+|+. +|+||||||+||++++++.+||
T Consensus 89 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~kl 165 (283)
T cd05091 89 YCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKLNVKI 165 (283)
T ss_pred cCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCCceEe
Confidence 9999999999842 256778899999999999999998 9999999999999999999999
Q ss_pred cccCccccccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccc
Q 005177 584 AEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEM 658 (710)
Q Consensus 584 ~DfGla~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~ 658 (710)
+|||+++........ .......|.+||......++.++|||||||++|||+| |..|+.+... .. ....+
T Consensus 166 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-~~-----~~~~i 239 (283)
T cd05091 166 SDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-QD-----VIEMI 239 (283)
T ss_pred cccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH-HH-----HHHHH
Confidence 999998754322111 1112233667888777778899999999999999998 6666643221 11 11111
Q ss_pred ccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhc
Q 005177 659 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 704 (710)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~ 704 (710)
.+......+. +....+.+++.+||+.+|++||+++|++..|+.
T Consensus 240 ~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 240 RNRQVLPCPD---DCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HcCCcCCCCC---CCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1111011111 223456789999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-35 Score=310.39 Aligned_cols=230 Identities=18% Similarity=0.170 Sum_probs=180.2
Q ss_pred hhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 453 EAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
.||+|+||.||+|.. .+|+.||||.++... ...+.+..|++++..+ +||||+++++++.+.+..++||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g 81 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGG 81 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCc
Confidence 589999999999986 578999999997532 2345566778888766 6999999999999999999999999999
Q ss_pred Chhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--CCccc
Q 005177 527 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAK 602 (710)
Q Consensus 527 sL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--~~~~~ 602 (710)
+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....+
T Consensus 82 ~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (320)
T cd05590 82 DLMFHIQKSRRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCG 158 (320)
T ss_pred hHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccccccc
Confidence 99998865 567888899999999999999998 999999999999999999999999999875321111 11223
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
...|.+||......++.++|||||||++|||+||+.||....... ....+.... ...+.. ....+.+++.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~------~~~~i~~~~-~~~~~~---~~~~~~~li~ 228 (320)
T cd05590 159 TPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD------LFEAILNDE-VVYPTW---LSQDAVDILK 228 (320)
T ss_pred CccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH------HHHHHhcCC-CCCCCC---CCHHHHHHHH
Confidence 445778898888888999999999999999999999986432111 111111111 111111 2245678889
Q ss_pred hcCCCCCCCCCCH
Q 005177 683 LCTRSTPSDRPSM 695 (710)
Q Consensus 683 ~Cl~~~p~~RPs~ 695 (710)
+|++.||++||++
T Consensus 229 ~~L~~dP~~R~~~ 241 (320)
T cd05590 229 AFMTKNPTMRLGS 241 (320)
T ss_pred HHcccCHHHCCCC
Confidence 9999999999998
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=298.09 Aligned_cols=244 Identities=19% Similarity=0.218 Sum_probs=183.6
Q ss_pred hhhhhcCCCCCccEEEEcCC-Cc--EEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcC------Ccee
Q 005177 450 ECEEAARPQSAAGCKAVLPT-GI--TVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR------HQAY 517 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~-g~--~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~------~~~~ 517 (710)
..+.||+|+||.||+|.... +. .||||.++.. ....+.+.+|++.+++++||||++++++|... ...+
T Consensus 3 i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 82 (272)
T cd05075 3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPV 82 (272)
T ss_pred cccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcE
Confidence 45789999999999998643 33 6999998754 23356788899999999999999999988542 2468
Q ss_pred EEEeecCCCChhhhhhc--------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcc
Q 005177 518 LLYDYLPNGNLSEKIRT--------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK 589 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~--------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla 589 (710)
+||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 83 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 159 (272)
T cd05075 83 VILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFGLS 159 (272)
T ss_pred EEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCCcc
Confidence 99999999999988731 357888999999999999999998 9999999999999999999999999998
Q ss_pred ccccccCC----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccccccccc
Q 005177 590 YLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEV 664 (710)
Q Consensus 590 ~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (710)
+....... ........+.+||+.....++.++|||||||++|||++ |+.|+....... ....+......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~------~~~~~~~~~~~ 233 (272)
T cd05075 160 KKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSE------IYDYLRQGNRL 233 (272)
T ss_pred cccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHH------HHHHHHcCCCC
Confidence 86532211 11111223556777777778899999999999999999 667765322110 00111111101
Q ss_pred CCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 665 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 665 ~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
.... .....+.+++.+||+.+|++|||+.|+++.|+++
T Consensus 234 ~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 234 KQPP---DCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCC---CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1111 1224567899999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-35 Score=307.97 Aligned_cols=234 Identities=18% Similarity=0.188 Sum_probs=179.1
Q ss_pred hhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhc-cCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 453 EAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGT-VRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~-l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
.||+|+||.||+|.. .+++.||||.++... ...+.+..|.+++.. .+||||+++++++..++..++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg 81 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 589999999999985 568899999998532 123344555666654 47999999999999999999999999999
Q ss_pred Chhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--CCccc
Q 005177 527 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAK 602 (710)
Q Consensus 527 sL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--~~~~~ 602 (710)
+|.+++.. ..+......++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....+
T Consensus 82 ~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~g 158 (316)
T cd05592 82 DLMFHIQSSGRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCG 158 (316)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccC
Confidence 99999865 467788889999999999999998 999999999999999999999999999875422111 11123
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
+..|.+||......++.++|||||||++|||++|+.|+.+..... ....+.... ...+.. ....+.+++.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~------~~~~i~~~~-~~~~~~---~~~~~~~ll~ 228 (316)
T cd05592 159 TPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE------LFDSILNDR-PHFPRW---ISKEAKDCLS 228 (316)
T ss_pred CccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH------HHHHHHcCC-CCCCCC---CCHHHHHHHH
Confidence 455778898888888999999999999999999999986432211 111111111 111111 1234668888
Q ss_pred hcCCCCCCCCCCHH-HHH
Q 005177 683 LCTRSTPSDRPSME-EAL 699 (710)
Q Consensus 683 ~Cl~~~p~~RPs~~-evl 699 (710)
+|++.+|++||++. ++.
T Consensus 229 ~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 229 KLFERDPTKRLGVDGDIR 246 (316)
T ss_pred HHccCCHHHcCCChHHHH
Confidence 99999999999976 443
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-35 Score=301.94 Aligned_cols=247 Identities=17% Similarity=0.236 Sum_probs=188.5
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCc
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ 515 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 515 (710)
++|+ ..+.+|+|+||.||+|.. .++..||||++.... .....+.+|+.++++++||||+++++++.+++.
T Consensus 6 ~~~~--~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 6 EKIT--MSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred HHce--eeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 3455 678899999999999874 245789999986432 235568899999999999999999999999999
Q ss_pred eeEEEeecCCCChhhhhhc------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEE
Q 005177 516 AYLLYDYLPNGNLSEKIRT------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 583 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl 583 (710)
.++||||+++|+|.++++. ..+|..+..++.|+++||+|||+. +++||||||+||++++++.+|+
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEEE
Confidence 9999999999999999864 136778889999999999999998 9999999999999999999999
Q ss_pred cccCccccccccCC----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccc
Q 005177 584 AEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEM 658 (710)
Q Consensus 584 ~DfGla~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~ 658 (710)
+|||+++....... ........|.+||+.....++.++|||||||++|||+| |..|+.+... .. .....
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~-~~-----~~~~~ 234 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN-EQ-----VLRFV 234 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH-HH-----HHHHH
Confidence 99999875432111 11111233667788777788999999999999999999 5667653221 11 00011
Q ss_pred ccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhc
Q 005177 659 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 704 (710)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~ 704 (710)
........+. .....+.+++.+|++.+|++|||+.|++++|++
T Consensus 235 ~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 235 MEGGLLDKPD---NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HcCCcCCCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 1111000011 123457789999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-35 Score=325.63 Aligned_cols=239 Identities=15% Similarity=0.144 Sum_probs=187.8
Q ss_pred hhhhhcCCCCCccEEEEc-CC-CcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PT-GITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~-g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.+|+|++|.||+|.. .+ +..||+|.+.... .....+.+|++++++++|||||+++++|.+++..|+||||+++|
T Consensus 71 ~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg 150 (478)
T PTZ00267 71 LTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGG 150 (478)
T ss_pred EEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCC
Confidence 678899999999999974 34 6788999876543 23456788999999999999999999999999999999999999
Q ss_pred Chhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC---
Q 005177 527 NLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--- 597 (710)
Q Consensus 527 sL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--- 597 (710)
+|.++++. .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 151 ~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~ 227 (478)
T PTZ00267 151 DLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDV 227 (478)
T ss_pred CHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccccc
Confidence 99988753 356778889999999999999998 999999999999999999999999999986532211
Q ss_pred -CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHH
Q 005177 598 -SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 676 (710)
Q Consensus 598 -~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (710)
....++..|.+||+.....++.++|||||||++|||+||+.|+...... .....+........+. .....
T Consensus 228 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~------~~~~~~~~~~~~~~~~---~~s~~ 298 (478)
T PTZ00267 228 ASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR------EIMQQVLYGKYDPFPC---PVSSG 298 (478)
T ss_pred ccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCCCCCCc---cCCHH
Confidence 1112445577889888888999999999999999999999998643211 0111111111000011 12345
Q ss_pred HHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 677 VLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 677 ~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
+.+++.+|++.+|++||++.|++.
T Consensus 299 ~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 299 MKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred HHHHHHHHhccChhhCcCHHHHHh
Confidence 778899999999999999999874
|
|
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=294.89 Aligned_cols=241 Identities=20% Similarity=0.252 Sum_probs=188.1
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEc-CCceeEEEeecCCCCh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN-RHQAYLLYDYLPNGNL 528 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-~~~~~lv~Ey~~~gsL 528 (710)
..+.+|+|+||.||++.. .|..||+|.++... ..+.+.+|+.++++++|+|++++++++.. ++..++||||+++|+|
T Consensus 10 ~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L 87 (256)
T cd05082 10 LLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 87 (256)
T ss_pred eeeeecccCCCeEEEEEE-cCCcEEEEEeCCCc-hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcH
Confidence 668899999999999976 47889999987543 35678899999999999999999998654 5678999999999999
Q ss_pred hhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCccccc
Q 005177 529 SEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIA 604 (710)
Q Consensus 529 ~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 604 (710)
.++++. ..++....+++.|++.||+|||+. +|+||||||+||++++++.+|++|||+++............ .
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~-~ 163 (256)
T cd05082 88 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP-V 163 (256)
T ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceeccccCCCCccc-e
Confidence 999865 257889999999999999999998 99999999999999999999999999987543322221112 2
Q ss_pred ccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhh
Q 005177 605 WTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 683 (710)
Q Consensus 605 ~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 683 (710)
.+.+||+.....++.++|||||||++|||++ |+.|+.... ..... ........+. . . ......+.+++.+
T Consensus 164 ~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~-~~~~~--~~~~~~~~~~-~--~---~~~~~~~~~li~~ 234 (256)
T cd05082 164 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-LKDVV--PRVEKGYKMD-A--P---DGCPPVVYDVMKQ 234 (256)
T ss_pred eecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC-HHHHH--HHHhcCCCCC-C--C---CCCCHHHHHHHHH
Confidence 3677888887788999999999999999998 777765321 11100 0000000000 0 1 1123457788999
Q ss_pred cCCCCCCCCCCHHHHHHHHhcc
Q 005177 684 CTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 684 Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
|++.+|++|||+.++++.|+++
T Consensus 235 ~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 235 CWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred HhcCChhhCcCHHHHHHHHhcC
Confidence 9999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-35 Score=309.63 Aligned_cols=238 Identities=18% Similarity=0.173 Sum_probs=183.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHH---HhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITR---IGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~---l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
..+.||+|+||.||+|.. .+|+.||||.++... ...+.+.+|+++ +++++||||+++++++.+.+..|+|||
T Consensus 3 i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E 82 (324)
T cd05589 3 CLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVME 82 (324)
T ss_pred EEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEc
Confidence 457899999999999985 678999999998532 123455666555 457789999999999999999999999
Q ss_pred ecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--C
Q 005177 522 YLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--S 598 (710)
Q Consensus 522 y~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--~ 598 (710)
|+++|+|..+++. .+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... .
T Consensus 83 ~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~ 159 (324)
T cd05589 83 YAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTS 159 (324)
T ss_pred CCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCccc
Confidence 9999999998865 578999999999999999999998 999999999999999999999999999864321111 1
Q ss_pred CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHH
Q 005177 599 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 678 (710)
Q Consensus 599 ~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (710)
...+...|.+||......++.++|||||||++|||++|+.|+.+..... ....+.... ...+.. ....+.
T Consensus 160 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~------~~~~i~~~~-~~~p~~---~~~~~~ 229 (324)
T cd05589 160 TFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE------VFDSIVNDE-VRYPRF---LSREAI 229 (324)
T ss_pred ccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCC-CCCCCC---CCHHHH
Confidence 1123445778898888888999999999999999999999986432110 011111111 111111 224567
Q ss_pred HHHhhcCCCCCCCCCC-----HHHHHH
Q 005177 679 DVALLCTRSTPSDRPS-----MEEALK 700 (710)
Q Consensus 679 ~l~~~Cl~~~p~~RPs-----~~evl~ 700 (710)
+++.+|++.||++||+ +.++++
T Consensus 230 ~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 230 SIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred HHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 8899999999999994 666554
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=312.85 Aligned_cols=233 Identities=16% Similarity=0.123 Sum_probs=182.6
Q ss_pred hhhcCCCCCccEEEEc----CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 452 EEAARPQSAAGCKAVL----PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~----~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
+.||+|+||.||++.. .+|+.||+|+++.... ....+.+|++++++++||||+++++++.+++..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 4689999999999864 4689999999986432 24456789999999999999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Cc
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FP 600 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~ 600 (710)
+|+|.+++.. .+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ ..
T Consensus 82 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 158 (318)
T cd05582 82 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 158 (318)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecc
Confidence 9999999865 468889999999999999999998 9999999999999999999999999998764322111 11
Q ss_pred ccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHH
Q 005177 601 AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 680 (710)
Q Consensus 601 ~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 680 (710)
.+...+.+||......++.++|||||||++|||+||+.|+....... ....+.... ...+.. ....+.++
T Consensus 159 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~------~~~~i~~~~-~~~p~~---~~~~~~~l 228 (318)
T cd05582 159 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKE------TMTMILKAK-LGMPQF---LSPEAQSL 228 (318)
T ss_pred cCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHH------HHHHHHcCC-CCCCCC---CCHHHHHH
Confidence 23444678888877788899999999999999999999986432111 011111111 111111 22456688
Q ss_pred HhhcCCCCCCCCCCHHH
Q 005177 681 ALLCTRSTPSDRPSMEE 697 (710)
Q Consensus 681 ~~~Cl~~~p~~RPs~~e 697 (710)
+.+|++.||++||++.+
T Consensus 229 i~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 229 LRALFKRNPANRLGAGP 245 (318)
T ss_pred HHHHhhcCHhHcCCCCC
Confidence 89999999999999544
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=303.78 Aligned_cols=247 Identities=19% Similarity=0.252 Sum_probs=184.8
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.||+|+||.||+|.. .+|+.||||.++.... ....+.+|++++++++||||+++++++.+++..++||||++ |
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~ 87 (303)
T cd07869 9 KLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH-T 87 (303)
T ss_pred EeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC-c
Confidence 678899999999999986 4789999999975322 23456789999999999999999999999999999999996 6
Q ss_pred Chhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Ccc
Q 005177 527 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPA 601 (710)
Q Consensus 527 sL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~ 601 (710)
+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++........ ...
T Consensus 88 ~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 164 (303)
T cd07869 88 DLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEV 164 (303)
T ss_pred CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCCCc
Confidence 88887754 467888899999999999999998 9999999999999999999999999998754322111 112
Q ss_pred cccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc----------------cccccccccccccccc
Q 005177 602 KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN----------------KPIDGLLGEMYNENEV 664 (710)
Q Consensus 602 ~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~----------------~~~~~~~~~~~~~~~~ 664 (710)
+..++.+||.... ..++.++||||+||++|||+||+.||.+...... |........ .++...
T Consensus 165 ~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 243 (303)
T cd07869 165 VTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPH-FKPERF 243 (303)
T ss_pred ccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccc-cccccc
Confidence 3445778887654 4578889999999999999999999874322110 000000000 000000
Q ss_pred --CCCcchHH------HHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 665 --GSSSSLQD------EIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 665 --~~~~~~~~------~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..+....+ ....+.+++.+|++.||++|||++|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 244 TLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred cccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 00111111 12356789999999999999999999863
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-35 Score=309.02 Aligned_cols=234 Identities=17% Similarity=0.168 Sum_probs=180.8
Q ss_pred hhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhc-cCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 453 EAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGT-VRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~-l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
.||+|+||.||+|.. .+|..||||.++... ...+....|.+++.. .+||||+++++++.+++..|+||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g 81 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCC
Confidence 689999999999986 578999999998642 223445667777764 48999999999999999999999999999
Q ss_pred Chhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--CCccc
Q 005177 527 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAK 602 (710)
Q Consensus 527 sL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--~~~~~ 602 (710)
+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....+
T Consensus 82 ~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (316)
T cd05620 82 DLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCG 158 (316)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCC
Confidence 99998865 567888899999999999999998 999999999999999999999999999864321111 11123
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
...|.+||+.....++.++||||+||++|||++|+.|+....... ....+.... ...+.. ....+.+++.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~------~~~~~~~~~-~~~~~~---~~~~~~~li~ 228 (316)
T cd05620 159 TPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDE------LFESIRVDT-PHYPRW---ITKESKDILE 228 (316)
T ss_pred CcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCC-CCCCCC---CCHHHHHHHH
Confidence 445778898888889999999999999999999999987433211 011111111 110111 2245678889
Q ss_pred hcCCCCCCCCCCHH-HHH
Q 005177 683 LCTRSTPSDRPSME-EAL 699 (710)
Q Consensus 683 ~Cl~~~p~~RPs~~-evl 699 (710)
+|++.||++||++. ++.
T Consensus 229 ~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 229 KLFERDPTRRLGVVGNIR 246 (316)
T ss_pred HHccCCHHHcCCChHHHH
Confidence 99999999999985 554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=298.62 Aligned_cols=241 Identities=20% Similarity=0.211 Sum_probs=177.8
Q ss_pred hhcCCCCCccEEEEcC---CCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 453 EAARPQSAAGCKAVLP---TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~~---~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
.||+|+||.||+|... ++..+|+|+++... .....+.+|+.++++++||||++++|++.+....++||||+++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence 5899999999999753 34679999987543 234568889999999999999999999999999999999999999
Q ss_pred hhhhhhc-------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--
Q 005177 528 LSEKIRT-------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 598 (710)
Q Consensus 528 L~~~l~~-------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~-- 598 (710)
|.++++. ..++....+++.|+++|++|||+. +++||||||+||+++.++.+|++|||+++........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~ 158 (269)
T cd05087 82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVT 158 (269)
T ss_pred HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcceeec
Confidence 9999864 235677788999999999999998 9999999999999999999999999998754321110
Q ss_pred --CcccccccCchhhhhcc-------CCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccc--ccccccccccccCC
Q 005177 599 --FPAKIAWTESGEFYNAM-------KEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPID--GLLGEMYNENEVGS 666 (710)
Q Consensus 599 --~~~~~~~~~~~e~~~~~-------~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 666 (710)
...+...+.+||+.... .++.++|||||||++|||++ |+.|+............ .......++. .
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~-- 235 (269)
T cd05087 159 PDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPR-L-- 235 (269)
T ss_pred CCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCc-c--
Confidence 01112225567765432 35778999999999999996 88888643221110000 0000111111 0
Q ss_pred CcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHh
Q 005177 667 SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 703 (710)
Q Consensus 667 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~ 703 (710)
.. .....+.+++.+|+ .+|++|||++||+..|+
T Consensus 236 ~~---~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 236 KL---PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CC---CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 00 11234566778898 58999999999998875
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=294.65 Aligned_cols=242 Identities=18% Similarity=0.264 Sum_probs=187.6
Q ss_pred hhhcCCCCCccEEEEc--CC--CcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 452 EEAARPQSAAGCKAVL--PT--GITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~--~~--g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
+.||+|+||.||+|+. .+ +..+|+|.+..... ..+.+.+|+++++++.|||||++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 3689999999999974 22 37899999986543 4667889999999999999999999876 4568999999999
Q ss_pred CChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCcc--
Q 005177 526 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPA-- 601 (710)
Q Consensus 526 gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~-- 601 (710)
|+|.+++.. ..++..+..++.|++.|++|||.. +++||||||+||+++.++.+|++|||+++...........
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~ 156 (257)
T cd05060 80 GPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATT 156 (257)
T ss_pred CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCccccccc
Confidence 999999965 468899999999999999999998 9999999999999999999999999998765332211111
Q ss_pred c---ccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 602 K---IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 602 ~---~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
. ...+.+||......++.++|||||||++|||++ |+.|+........ . ....+ ......+ ......+
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~--~-~~~~~---~~~~~~~---~~~~~~l 227 (257)
T cd05060 157 AGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEV--I-AMLES---GERLPRP---EECPQEI 227 (257)
T ss_pred CccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHH--H-HHHHc---CCcCCCC---CCCCHHH
Confidence 0 112567787777788999999999999999998 8888764322110 0 00000 0000101 1123467
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 678 LDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
.+++.+|+..+|++||++.++++.|+++.
T Consensus 228 ~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 228 YSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred HHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 78999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-35 Score=303.82 Aligned_cols=243 Identities=14% Similarity=0.103 Sum_probs=188.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||++.. .+|+.||||.+..... ....+.+|++++++++||||+++++++.+++..++||||++
T Consensus 4 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 83 (285)
T cd05605 4 HYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMN 83 (285)
T ss_pred EEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccC
Confidence 567899999999999985 5789999999975322 23456789999999999999999999999999999999999
Q ss_pred CCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC-C
Q 005177 525 NGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-F 599 (710)
Q Consensus 525 ~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~-~ 599 (710)
+|+|.+++.. ..++.....++.|++.|++|||+. +|+||||||+||++++++.++|+|||+++........ .
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05605 84 GGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRG 160 (285)
T ss_pred CCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcccc
Confidence 9999988753 467889999999999999999998 9999999999999999999999999998765322111 1
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 679 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (710)
..+...+.+||......++.++||||+||++|||++|+.||.+...... .......+.... .. ........+.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~-~~---~~~~~~~~~~~ 234 (285)
T cd05605 161 RVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVK--REEVERRVKEDQ-EE---YSEKFSEAARS 234 (285)
T ss_pred ccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhH--HHHHHHHhhhcc-cc---cCcccCHHHHH
Confidence 1123346778888777889999999999999999999999874322110 000001111100 11 11123345678
Q ss_pred HHhhcCCCCCCCCC-----CHHHHHHH
Q 005177 680 VALLCTRSTPSDRP-----SMEEALKL 701 (710)
Q Consensus 680 l~~~Cl~~~p~~RP-----s~~evl~~ 701 (710)
++.+|++.||++|| ++++++++
T Consensus 235 li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 235 ICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred HHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 99999999999999 78888654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=316.10 Aligned_cols=242 Identities=16% Similarity=0.125 Sum_probs=190.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|++++..++||||+++++++.+++..++||||++
T Consensus 5 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 84 (350)
T cd05573 5 VIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMP 84 (350)
T ss_pred EEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCC
Confidence 668899999999999986 579999999998642 235678889999999999999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC------
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD------ 596 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~------ 596 (710)
+|+|.+++.. .+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 85 ~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 161 (350)
T cd05573 85 GGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYL 161 (350)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccc
Confidence 9999999975 467888899999999999999998 99999999999999999999999999987643222
Q ss_pred -------------------------CCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc
Q 005177 597 -------------------------GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI 651 (710)
Q Consensus 597 -------------------------~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~ 651 (710)
.....+...|.+||......++.++|||||||++|||++|+.|+........+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~- 240 (350)
T cd05573 162 NDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYN- 240 (350)
T ss_pred cccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHH-
Confidence 011123445778898888889999999999999999999999987543211100
Q ss_pred cccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCC-HHHHHHH
Q 005177 652 DGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPS-MEEALKL 701 (710)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs-~~evl~~ 701 (710)
... ........+... .....+.+++.+|+. +|++||+ ++|++++
T Consensus 241 -~i~-~~~~~~~~p~~~---~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 241 -KII-NWKESLRFPPDP---PVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred -HHh-ccCCcccCCCCC---CCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 000 000000011011 123456678888997 9999999 9999875
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=314.52 Aligned_cols=243 Identities=19% Similarity=0.156 Sum_probs=185.3
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCCh
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
..+.||+|+||.||++.. .+++.||+|... .+.+.+|++++++++|||||++++++..++..++||||+. ++|
T Consensus 96 ~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-----~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L 169 (391)
T PHA03212 96 ILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-----RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDL 169 (391)
T ss_pred EEEEEcCCCCeEEEEEEECCCCCEEEEechh-----hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCH
Confidence 778899999999999985 678999999764 2346789999999999999999999999999999999996 789
Q ss_pred hhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-C--Ccccc
Q 005177 529 SEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-S--FPAKI 603 (710)
Q Consensus 529 ~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-~--~~~~~ 603 (710)
.+++.. .+++.....|+.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... . ...++
T Consensus 170 ~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt 246 (391)
T PHA03212 170 YCYLAAKRNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGT 246 (391)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccccCc
Confidence 888864 568888999999999999999998 999999999999999999999999999875322111 1 11244
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc---------------------cccc--ccccccc-
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------------KPID--GLLGEMY- 659 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~---------------------~~~~--~~~~~~~- 659 (710)
..|.+||+.....++.++|||||||++|||+||+.|+........ +... ....+.+
T Consensus 247 ~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~ 326 (391)
T PHA03212 247 IATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYI 326 (391)
T ss_pred cCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHH
Confidence 557788988888889999999999999999999988764321110 0000 0000000
Q ss_pred ---cc-cc-cCCCcch---HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 660 ---NE-NE-VGSSSSL---QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 660 ---~~-~~-~~~~~~~---~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.. .. ....+.+ .+....+.+++.+|++.||++|||++|+++.
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 327 GLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred HHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 00 00 0000111 1223467789999999999999999999863
|
|
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-35 Score=316.01 Aligned_cols=242 Identities=13% Similarity=0.092 Sum_probs=186.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++..++||||+++++++.+++..++||||++
T Consensus 5 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~ 84 (364)
T cd05599 5 SIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLP 84 (364)
T ss_pred EEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCC
Confidence 678899999999999985 578999999998642 234567889999999999999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-----
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG----- 597 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~----- 597 (710)
+|+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 85 ~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 161 (364)
T cd05599 85 GGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYR 161 (364)
T ss_pred CcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceeccccccccccc
Confidence 9999999865 467888899999999999999998 999999999999999999999999999865321100
Q ss_pred -----------------------------------CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCC
Q 005177 598 -----------------------------------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNA 642 (710)
Q Consensus 598 -----------------------------------~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~ 642 (710)
....++..+++||+.....++.++|||||||++|||++|+.||..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~ 241 (364)
T cd05599 162 ILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCS 241 (364)
T ss_pred cccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCC
Confidence 001134457788988888889999999999999999999999874
Q ss_pred CCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCC---HHHHHHH
Q 005177 643 GSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPS---MEEALKL 701 (710)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs---~~evl~~ 701 (710)
...... ..... ............ .....+.+++.+|+. +|.+|++ ++|++++
T Consensus 242 ~~~~~~--~~~i~-~~~~~~~~~~~~---~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 242 DNPQET--YRKII-NWKETLQFPDEV---PLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCHHHH--HHHHH-cCCCccCCCCCC---CCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 432110 00000 000000000011 112345677777886 9999998 8888763
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=314.74 Aligned_cols=244 Identities=17% Similarity=0.213 Sum_probs=187.0
Q ss_pred hhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccch--hHHHHHHHHHHHhccC-CCCceeEEEEEEcCCceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ 520 (710)
..+.||+|+||.||+|.. ..++.||||+++.... ..+.+.+|++++.++. |||||+++|+|.+++..++||
T Consensus 41 ~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~ 120 (401)
T cd05107 41 LGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIIT 120 (401)
T ss_pred hhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEE
Confidence 668999999999999984 2356899999986422 2456889999999997 999999999999999999999
Q ss_pred eecCCCChhhhhhcC-----------------------------------------------------------------
Q 005177 521 DYLPNGNLSEKIRTK----------------------------------------------------------------- 535 (710)
Q Consensus 521 Ey~~~gsL~~~l~~~----------------------------------------------------------------- 535 (710)
||+++|+|.++++..
T Consensus 121 E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (401)
T cd05107 121 EYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVK 200 (401)
T ss_pred eccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhhhh
Confidence 999999999998531
Q ss_pred -----------------------------------CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc
Q 005177 536 -----------------------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580 (710)
Q Consensus 536 -----------------------------------~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~ 580 (710)
++|.+..+++.|+++||+|||+. +|+||||||+|||+++++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~NiLl~~~~~ 277 (401)
T cd05107 201 YADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNVLICEGKL 277 (401)
T ss_pred hhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceEEEeCCCE
Confidence 35666788999999999999988 9999999999999999999
Q ss_pred eEEcccCccccccccCCCC----cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccc
Q 005177 581 PHLAEFGFKYLTQLADGSF----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLL 655 (710)
Q Consensus 581 ~kl~DfGla~~~~~~~~~~----~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~ 655 (710)
+|++|||+++......... ......+.+||......++.++|||||||++|||++ |+.|+........ .
T Consensus 278 ~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~------~ 351 (401)
T cd05107 278 VKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ------F 351 (401)
T ss_pred EEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH------H
Confidence 9999999987543211100 111223567787777778889999999999999998 7777653221110 0
Q ss_pred cccccccc-cCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 656 GEMYNENE-VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 656 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
.+...... ...+. .....+.+++.+||+.+|++||+|+|+++.|+.+
T Consensus 352 ~~~~~~~~~~~~p~---~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 352 YNAIKRGYRMAKPA---HASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred HHHHHcCCCCCCCC---CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 01111100 00011 1234677889999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=313.08 Aligned_cols=237 Identities=18% Similarity=0.184 Sum_probs=190.9
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCcee
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 517 (710)
++|. ...++|+|.||+|+.+.+ .+++.+|||.++++. ...+..+.|.+++.-. +||.++.|+.+|++++++|
T Consensus 368 ~~F~--~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 368 DDFR--LLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cceE--EEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 3466 778999999999999986 678899999999853 3466677787776655 5999999999999999999
Q ss_pred EEEeecCCCChhhhhh-cCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccc--
Q 005177 518 LLYDYLPNGNLSEKIR-TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL-- 594 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~-- 594 (710)
.||||+.|||+..+.+ ...+.++...++..|+.||+|||++ +||+||||-+|||||.+|++||+|||++|..-.
T Consensus 446 fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g 522 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQG 522 (694)
T ss_pred EEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccccCCCC
Confidence 9999999999777777 4678888899999999999999999 999999999999999999999999999986432
Q ss_pred cCCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 595 ADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 595 ~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
..+++-.+++-+.+||++..+.|+.++|.|||||++|||++|+.||.++.... .+..++... ...+. -..
T Consensus 523 ~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee------~FdsI~~d~-~~yP~---~ls 592 (694)
T KOG0694|consen 523 DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEE------VFDSIVNDE-VRYPR---FLS 592 (694)
T ss_pred CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHH------HHHHHhcCC-CCCCC---ccc
Confidence 22222335666778899999999999999999999999999999998554211 122222222 11121 223
Q ss_pred HHHHHHHhhcCCCCCCCCCCH
Q 005177 675 KLVLDVALLCTRSTPSDRPSM 695 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~ 695 (710)
.+.++++.+.+..+|++|--+
T Consensus 593 ~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 593 KEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HHHHHHHHHHhccCcccccCC
Confidence 566778888999999999866
|
|
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-35 Score=310.25 Aligned_cols=231 Identities=16% Similarity=0.099 Sum_probs=177.8
Q ss_pred hhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHH-HHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 453 EAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFI-TRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~-~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
.||+|+||.||+|.. .+|+.||||.+..... ..+.+.+|. .+++.++|||||++++++.+++..++||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g 81 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGG 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCC
Confidence 589999999999986 5799999999975321 223344444 4567899999999999999999999999999999
Q ss_pred Chhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Cccc
Q 005177 527 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAK 602 (710)
Q Consensus 527 sL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~~ 602 (710)
+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++........ ...+
T Consensus 82 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (323)
T cd05575 82 ELFFHLQRERSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCG 158 (323)
T ss_pred CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccC
Confidence 99998865 467888889999999999999998 9999999999999999999999999998753211111 1123
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
...|.+||......++.++|||||||++|||++|+.|+....... ....+.... ....+. ....+.+++.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~------~~~~i~~~~-~~~~~~---~~~~~~~li~ 228 (323)
T cd05575 159 TPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE------MYDNILNKP-LRLKPN---ISVSARHLLE 228 (323)
T ss_pred ChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHH------HHHHHHcCC-CCCCCC---CCHHHHHHHH
Confidence 444678888888888999999999999999999999986432110 111111111 111111 1345678889
Q ss_pred hcCCCCCCCCCCHH
Q 005177 683 LCTRSTPSDRPSME 696 (710)
Q Consensus 683 ~Cl~~~p~~RPs~~ 696 (710)
+|++.||++||++.
T Consensus 229 ~~l~~~p~~R~~~~ 242 (323)
T cd05575 229 GLLQKDRTKRLGAK 242 (323)
T ss_pred HHhhcCHHhCCCCC
Confidence 99999999999984
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=299.53 Aligned_cols=244 Identities=18% Similarity=0.222 Sum_probs=187.1
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhcc-CCCCceeEEEEEEcC------Cc
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNR------HQ 515 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~------~~ 515 (710)
..|. ..+.+|+|+||.||+|.. .+++.||+|.+.........+..|+.++.++ +||||+++++++... +.
T Consensus 6 ~~y~--~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 83 (272)
T cd06637 6 GIFE--LVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ 83 (272)
T ss_pred hhhh--HHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcE
Confidence 3455 678899999999999985 5788999999986655566788899999988 699999999998753 45
Q ss_pred eeEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 516 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
.++||||+++|+|.+++.. .++|.....++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 84 ~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg~~~~ 160 (272)
T cd06637 84 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 160 (272)
T ss_pred EEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCCCcee
Confidence 8999999999999999875 357888999999999999999998 999999999999999999999999999875
Q ss_pred ccccCCC--CcccccccCchhhhh-----ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccccccc
Q 005177 592 TQLADGS--FPAKIAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 664 (710)
Q Consensus 592 ~~~~~~~--~~~~~~~~~~~e~~~-----~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (710)
....... ...+...+.+||+.. ...++.++|||||||++|||++|+.|+.+......... ......+. .
T Consensus 161 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~---~~~~~~~~-~ 236 (272)
T cd06637 161 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL---IPRNPAPR-L 236 (272)
T ss_pred cccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHH---HhcCCCCC-C
Confidence 4322111 111334466778764 23577889999999999999999999864322111000 00000000 0
Q ss_pred CCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 665 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 665 ~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
. .. .....+.+++.+||..+|++|||+.|+++
T Consensus 237 ~-~~---~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 237 K-SK---KWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred C-CC---CcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 0 11 12245778999999999999999999975
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=302.54 Aligned_cols=247 Identities=16% Similarity=0.221 Sum_probs=193.9
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEE
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 520 (710)
...|. ..+.+|+|++|.||+|.. .+|..||+|.+..... ..+.+.+|++++++++||||+++++++..++..++||
T Consensus 19 ~~~y~--~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~ 96 (296)
T cd06654 19 KKKYT--RFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (296)
T ss_pred cccee--eEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEee
Confidence 34455 678899999999999984 6789999999986432 3566888999999999999999999999999999999
Q ss_pred eecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC-
Q 005177 521 DYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 598 (710)
Q Consensus 521 Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~- 598 (710)
||+++|+|.++++. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 97 e~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 173 (296)
T cd06654 97 EYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 173 (296)
T ss_pred cccCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhcccccccc
Confidence 99999999999875 468889999999999999999998 9999999999999999999999999998754322111
Q ss_pred -CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 599 -FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 599 -~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
...+...|.+||.......+.++|||||||++|||+||+.||........+.. ......+. ..........+
T Consensus 174 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~-----~~~~~~~~--~~~~~~~~~~l 246 (296)
T cd06654 174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL-----IATNGTPE--LQNPEKLSAIF 246 (296)
T ss_pred CcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHH-----HhcCCCCC--CCCccccCHHH
Confidence 11233446778888777788999999999999999999999874432111110 00011100 01111223456
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 678 LDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+++.+|+..+|++||++.|+++.
T Consensus 247 ~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 247 RDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred HHHHHHHCcCCcccCcCHHHHhhC
Confidence 788999999999999999999874
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=300.40 Aligned_cols=244 Identities=22% Similarity=0.248 Sum_probs=189.3
Q ss_pred hhhhhcCCCCCccEEEEcC------CCcEEEEEEeeccc--hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVLP------TGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~------~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 520 (710)
..+.||+|+||.||++... ....+|+|.+.... .....+.+|++++.++ +||||+++++++..++..++||
T Consensus 16 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~ 95 (293)
T cd05053 16 LGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVV 95 (293)
T ss_pred EeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEE
Confidence 6678999999999999752 34689999987532 2345678899999999 7999999999999999999999
Q ss_pred eecCCCChhhhhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceE
Q 005177 521 DYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 582 (710)
Q Consensus 521 Ey~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~k 582 (710)
||+++|+|.++++. .+++..+.+++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 96 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~~~~~~~k 172 (293)
T cd05053 96 EYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLVTEDHVMK 172 (293)
T ss_pred EeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEEcCCCeEE
Confidence 99999999999853 357888999999999999999988 999999999999999999999
Q ss_pred EcccCccccccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccc
Q 005177 583 LAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGE 657 (710)
Q Consensus 583 l~DfGla~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~ 657 (710)
++|||+++........ .......+.+||......++.++|||||||++|||++ |..|+....... ....
T Consensus 173 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~------~~~~ 246 (293)
T cd05053 173 IADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE------LFKL 246 (293)
T ss_pred eCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH------HHHH
Confidence 9999998765322110 0111223667888777788999999999999999998 777765322110 0001
Q ss_pred cccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 658 MYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
..... .. .........+.+++.+|++.+|++||||.|+++.|+++
T Consensus 247 ~~~~~-~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~ 291 (293)
T cd05053 247 LKEGY-RM--EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291 (293)
T ss_pred HHcCC-cC--CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence 10100 00 00112234677899999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=312.98 Aligned_cols=246 Identities=13% Similarity=0.085 Sum_probs=186.3
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
.|. ..+.||+|+||.||++.. .+++.||+|.+.... ...+.+.+|+++++.++|||||++++++.+++..|+|
T Consensus 44 ~y~--~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv 121 (370)
T cd05621 44 DYD--VVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMV 121 (370)
T ss_pred HCe--EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 355 678899999999999986 568899999997522 2345678899999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-
Q 005177 520 YDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 597 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~- 597 (710)
|||+++|+|.+++.. ..+......++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 122 ~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~ 198 (370)
T cd05621 122 MEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMV 198 (370)
T ss_pred EcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceecccCCce
Confidence 999999999999975 467788889999999999999998 999999999999999999999999999876532211
Q ss_pred --CCcccccccCchhhhhcc----CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchH
Q 005177 598 --SFPAKIAWTESGEFYNAM----KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 671 (710)
Q Consensus 598 --~~~~~~~~~~~~e~~~~~----~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (710)
....++..|.+||..... .++.++||||+||++|||+||+.||....... ...++.+.......+...
T Consensus 199 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~------~~~~i~~~~~~~~~p~~~ 272 (370)
T cd05621 199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVG------TYSKIMDHKNSLNFPEDV 272 (370)
T ss_pred ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHH------HHHHHHhCCcccCCCCcc
Confidence 112244557788877543 36789999999999999999999997443211 111111111000001111
Q ss_pred HHHHHHHHHHhhcCCCCCCC--CCCHHHHHHH
Q 005177 672 DEIKLVLDVALLCTRSTPSD--RPSMEEALKL 701 (710)
Q Consensus 672 ~~~~~~~~l~~~Cl~~~p~~--RPs~~evl~~ 701 (710)
.....+.+++..|+..+|.+ ||++.|++++
T Consensus 273 ~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 273 EISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred cCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 12344556777788755543 8999998875
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=294.31 Aligned_cols=240 Identities=15% Similarity=0.166 Sum_probs=191.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.+|+|++|.||+|.. .+|+.||+|.+... ....+.+.+|++++++++||||+++++++.+++..++||||+++
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd08529 4 ILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAEN 83 (256)
T ss_pred EeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCC
Confidence 557899999999999986 57899999998753 33466788899999999999999999999999999999999999
Q ss_pred CChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--C
Q 005177 526 GNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--F 599 (710)
Q Consensus 526 gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~ 599 (710)
++|.++++. ..++.+..+++.|++.||+|||+. +|+||||||+||++++++.+|++|||+++........ .
T Consensus 84 ~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~ 160 (256)
T cd08529 84 GDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT 160 (256)
T ss_pred CcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCccchhhc
Confidence 999999865 357888899999999999999998 9999999999999999999999999998765432111 1
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 679 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (710)
..+..++.+||+.....++.++|||||||+++||+||+.|+...... ... ....... .. .........+.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~----~~~~~~~-~~--~~~~~~~~~~~~ 231 (256)
T cd08529 161 IVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG--ALI----LKIIRGV-FP--PVSQMYSQQLAQ 231 (256)
T ss_pred cccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--HHH----HHHHcCC-CC--CCccccCHHHHH
Confidence 12344577889888878889999999999999999999998643311 000 1111111 00 001122356788
Q ss_pred HHhhcCCCCCCCCCCHHHHHHH
Q 005177 680 VALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 680 l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
++.+|++.+|++||+|.|+++.
T Consensus 232 ~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 232 LIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred HHHHHccCCcccCcCHHHHhhC
Confidence 9999999999999999999864
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-35 Score=307.65 Aligned_cols=235 Identities=16% Similarity=0.149 Sum_probs=184.1
Q ss_pred hhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 453 EAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
.||+|+||.||+|.. .++..||||.++... .....+..|++++..+ +||||+++++++.+.+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGG 81 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 589999999999986 568899999998642 2345566788888777 6999999999999999999999999999
Q ss_pred Chhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Cccc
Q 005177 527 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAK 602 (710)
Q Consensus 527 sL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~~ 602 (710)
+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++........ ...+
T Consensus 82 ~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (318)
T cd05570 82 DLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCG 158 (318)
T ss_pred CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceec
Confidence 99998865 478999999999999999999998 9999999999999999999999999998643211111 1113
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
...|.+||+.....++.++|||||||++|||+||+.||....... ....+.... ...+. .....+.+++.
T Consensus 159 ~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~------~~~~i~~~~-~~~~~---~~~~~~~~li~ 228 (318)
T cd05570 159 TPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDE------LFQSILEDE-VRYPR---WLSKEAKSILK 228 (318)
T ss_pred CccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHH------HHHHHHcCC-CCCCC---cCCHHHHHHHH
Confidence 344778898888889999999999999999999999986432111 011111111 11011 12245678999
Q ss_pred hcCCCCCCCCCCH-----HHHHH
Q 005177 683 LCTRSTPSDRPSM-----EEALK 700 (710)
Q Consensus 683 ~Cl~~~p~~RPs~-----~evl~ 700 (710)
+|++.||++||++ .++++
T Consensus 229 ~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 229 SFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred HHccCCHHHcCCCCCCCHHHHhc
Confidence 9999999999999 77765
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=298.38 Aligned_cols=243 Identities=16% Similarity=0.194 Sum_probs=188.5
Q ss_pred hhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
....+|+|+||.||++.. .++..+|+|.+.... ...+.+.+|++.+++++||||+++++++.+.+..++||||
T Consensus 9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 88 (280)
T cd05092 9 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEY 88 (280)
T ss_pred eccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEec
Confidence 567899999999999963 346789999987543 3356789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhc-----------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcc
Q 005177 523 LPNGNLSEKIRT-----------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 585 (710)
Q Consensus 523 ~~~gsL~~~l~~-----------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~D 585 (710)
+++|+|.++++. .+++.++..++.|++.|++|||+. +|+||||||+||++++++.+||+|
T Consensus 89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~~~kL~d 165 (280)
T cd05092 89 MRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGLVVKIGD 165 (280)
T ss_pred CCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCCCEEECC
Confidence 999999999864 257888999999999999999998 999999999999999999999999
Q ss_pred cCccccccccCC----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccccc
Q 005177 586 FGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYN 660 (710)
Q Consensus 586 fGla~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 660 (710)
||+++....... ........+.+||......++.++|||||||++|||+| |+.|+....... .......
T Consensus 166 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~------~~~~~~~ 239 (280)
T cd05092 166 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE------AIECITQ 239 (280)
T ss_pred CCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH------HHHHHHc
Confidence 999875432111 00111223667888877888999999999999999999 777765322110 0111111
Q ss_pred ccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhc
Q 005177 661 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 704 (710)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~ 704 (710)
......+. .....+.+++.+||+.||.+||+++|+.+.|++
T Consensus 240 ~~~~~~~~---~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 240 GRELERPR---TCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred CccCCCCC---CCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 11011011 122456789999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=300.73 Aligned_cols=249 Identities=20% Similarity=0.228 Sum_probs=187.9
Q ss_pred hhhhhcCCCCCccEEEEcC-----------------CCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEE
Q 005177 450 ECEEAARPQSAAGCKAVLP-----------------TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFC 510 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~-----------------~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~ 510 (710)
..+.+|+|+||.||+|... .+..||+|.+.... ...+.+.+|++++++++||||++++++|
T Consensus 9 ~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 88 (296)
T cd05051 9 FVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVC 88 (296)
T ss_pred ccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 6789999999999998753 23568999987643 3466788999999999999999999999
Q ss_pred EcCCceeEEEeecCCCChhhhhhc-------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC
Q 005177 511 YNRHQAYLLYDYLPNGNLSEKIRT-------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 577 (710)
Q Consensus 511 ~~~~~~~lv~Ey~~~gsL~~~l~~-------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~ 577 (710)
..++..++||||+++++|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.
T Consensus 89 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~Nili~~ 165 (296)
T cd05051 89 TVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRNCLVGK 165 (296)
T ss_pred ecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---CccccccchhceeecC
Confidence 999999999999999999999865 357888999999999999999998 9999999999999999
Q ss_pred CCceEEcccCccccccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHh--CCCCCCCCCCCCcccc
Q 005177 578 NMEPHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT--NGRLTNAGSSLQNKPI 651 (710)
Q Consensus 578 ~~~~kl~DfGla~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt--g~~p~~~~~~~~~~~~ 651 (710)
++.++++|||+++........ .......|.+||+.....++.++|||||||++|||++ |..|+....... ..
T Consensus 166 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~--~~ 243 (296)
T cd05051 166 NYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQ--VI 243 (296)
T ss_pred CCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHH--HH
Confidence 999999999998754321111 1111223667888777788999999999999999998 455554322111 00
Q ss_pred cccccccccc-cccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhc
Q 005177 652 DGLLGEMYNE-NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 704 (710)
Q Consensus 652 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~ 704 (710)
.. ....... ......+.......++.+++.+|++.||++|||+.|+++.|+.
T Consensus 244 ~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 244 EN-AGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred HH-HHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 00 0011000 0000000011122467899999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=295.99 Aligned_cols=244 Identities=19% Similarity=0.260 Sum_probs=190.6
Q ss_pred hhhhhcCCCCCccEEEEcC----CCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~----~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
..+.+|+|+||.||+|... .+..+|+|.++... ...+.+.+|+.++.+++||||+++++++.+++..++||||+
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (267)
T cd05066 8 IEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYM 87 (267)
T ss_pred eeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcC
Confidence 5688999999999999752 34479999987542 23567889999999999999999999999999999999999
Q ss_pred CCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCc
Q 005177 524 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFP 600 (710)
Q Consensus 524 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~ 600 (710)
++|+|.+++.. ..++.+..+++.|++.|++|||+. +|+||||||+||+++.++.+|++|||+++..........
T Consensus 88 ~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (267)
T cd05066 88 ENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAY 164 (267)
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCcccccccccceee
Confidence 99999999975 468899999999999999999998 999999999999999999999999999876543211110
Q ss_pred ---c--cccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 601 ---A--KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 601 ---~--~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
. ....+.+||+.....++.++|||||||++||+++ |+.|+.+...... ...+.+....... ....
T Consensus 165 ~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~------~~~~~~~~~~~~~---~~~~ 235 (267)
T cd05066 165 TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDV------IKAIEEGYRLPAP---MDCP 235 (267)
T ss_pred ecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHH------HHHHhCCCcCCCC---CCCC
Confidence 0 1123567788877788999999999999999887 8888764321110 0011111001101 1123
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
..+.+++.+|++.+|++||+|.++++.|+++
T Consensus 236 ~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 236 AALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred HHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 4567899999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=297.93 Aligned_cols=244 Identities=17% Similarity=0.193 Sum_probs=188.5
Q ss_pred cCCchhhhhhcCCCCCccEEEEcC------CCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCce
Q 005177 445 SFNSTECEEAARPQSAAGCKAVLP------TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 516 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~~------~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 516 (710)
.|. ..+.+|+|++|.||+|... .+..||+|.+.... .....+.+|+.++++++||||+++++++.+.+..
T Consensus 7 ~~~--~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 7 SIT--LLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HcE--eeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 355 6688999999999999864 46789999887432 2355688899999999999999999999999999
Q ss_pred eEEEeecCCCChhhhhhc---------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC---ceEEc
Q 005177 517 YLLYDYLPNGNLSEKIRT---------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM---EPHLA 584 (710)
Q Consensus 517 ~lv~Ey~~~gsL~~~l~~---------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~---~~kl~ 584 (710)
++||||+++|+|.++++. ..+|.++.+++.|+++|++|||+. +++||||||+||+++.++ .+|++
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEec
Confidence 999999999999999864 357889999999999999999998 999999999999998754 59999
Q ss_pred ccCccccccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccc
Q 005177 585 EFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMY 659 (710)
Q Consensus 585 DfGla~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 659 (710)
|||+++........ .......+.+||+..+..++.++|||||||++|||+| |+.|+...... .. .+.+
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~-~~------~~~~ 234 (277)
T cd05036 162 DFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ-EV------MEFV 234 (277)
T ss_pred cCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-HH------HHHH
Confidence 99998765321110 1111123667888877889999999999999999997 77777643211 10 0111
Q ss_pred ccc-ccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHh
Q 005177 660 NEN-EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 703 (710)
Q Consensus 660 ~~~-~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~ 703 (710)
... ....+. .....+.+++.+|++.+|++||++.||++.|+
T Consensus 235 ~~~~~~~~~~---~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 235 TGGGRLDPPK---GCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HcCCcCCCCC---CCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 100 000011 12345778999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=294.65 Aligned_cols=235 Identities=19% Similarity=0.233 Sum_probs=181.3
Q ss_pred hhhcCCCCCccEEEEcCC-C----------cEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEE
Q 005177 452 EEAARPQSAAGCKAVLPT-G----------ITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~~~-g----------~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 520 (710)
+.||+|+||.||+|.... + ..||+|.+.........+.+|+.++++++||||++++|++.. +..++||
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 79 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE 79 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence 368999999999999743 3 258888877654446788899999999999999999999988 7889999
Q ss_pred eecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC-------ceEEcccCccc
Q 005177 521 DYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM-------EPHLAEFGFKY 590 (710)
Q Consensus 521 Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~-------~~kl~DfGla~ 590 (710)
||+++|+|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+|++|||+++
T Consensus 80 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~ 156 (259)
T cd05037 80 EYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPI 156 (259)
T ss_pred EcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCCCCccc
Confidence 99999999999865 468889999999999999999998 999999999999999887 79999999987
Q ss_pred cccccCCCCcccccccCchhhhhcc--CCccccceeeHHHHHHHHHhC-CCCCCCCCCCCcccccccccccccccccCCC
Q 005177 591 LTQLADGSFPAKIAWTESGEFYNAM--KEEMYMDVYGFGEIILEILTN-GRLTNAGSSLQNKPIDGLLGEMYNENEVGSS 667 (710)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~e~~~~~--~~~~~~DVySfGvvl~Elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (710)
..... ........ +.+||+.... .++.++|||||||++|||++| ..|+.... ...+.. ..........+
T Consensus 157 ~~~~~-~~~~~~~~-y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~-~~~~~~-----~~~~~~~~~~~ 228 (259)
T cd05037 157 TVLSR-EERVERIP-WIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLS-SSEKER-----FYQDQHRLPMP 228 (259)
T ss_pred ccccc-cccccCCC-ccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCC-chhHHH-----HHhcCCCCCCC
Confidence 64321 11111233 5677877655 688899999999999999995 45544321 111000 00011101111
Q ss_pred cchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHh
Q 005177 668 SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 703 (710)
Q Consensus 668 ~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~ 703 (710)
. ...+.+++.+|+..+|++|||+.|+++.|+
T Consensus 229 ~-----~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 229 D-----CAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred C-----chHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 1 156778999999999999999999998873
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-35 Score=276.11 Aligned_cols=248 Identities=21% Similarity=0.238 Sum_probs=193.1
Q ss_pred hhhhhcCCCCCccEEEE-cCCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcC-----CceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR-----HQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~-~~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-----~~~~lv~Ey 522 (710)
....+|+|||..||.++ +.++..+|+|++.... .+.+...+|++.-++++||||+++++++..+ .+.||+++|
T Consensus 25 i~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Py 104 (302)
T KOG2345|consen 25 IQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPY 104 (302)
T ss_pred EeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeeh
Confidence 77899999999999998 6889999999998865 5578899999999999999999999987543 359999999
Q ss_pred cCCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc-
Q 005177 523 LPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA- 595 (710)
Q Consensus 523 ~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~- 595 (710)
...|+|.+.+.. ..+..+.+.|+.|+++||++||.. .|+..||||||.|||+.+++.+++.|||-+......
T Consensus 105 y~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i 183 (302)
T KOG2345|consen 105 YKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQI 183 (302)
T ss_pred hccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCccccceEe
Confidence 999999999864 457888999999999999999986 567999999999999999999999999976543211
Q ss_pred -CC----------CCcccccccCchhhhh---ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCC-ccccccccccccc
Q 005177 596 -DG----------SFPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ-NKPIDGLLGEMYN 660 (710)
Q Consensus 596 -~~----------~~~~~~~~~~~~e~~~---~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~-~~~~~~~~~~~~~ 660 (710)
.. ....+.+ |++||... +...++++|||||||++|+|+.|..||+....-- .........++.-
T Consensus 184 ~~~~~a~~lQe~a~e~Ct~p-yRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~ 262 (302)
T KOG2345|consen 184 EGSRQALRLQEWAEERCTIP-YRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISI 262 (302)
T ss_pred echHHHHHHHHHHHHhCCCc-ccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeecccccc
Confidence 00 0011344 66777665 3457889999999999999999999998322100 0001111112222
Q ss_pred ccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 661 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
|+ ... ....+.+++..|++.||.+||++.|++..++.+.
T Consensus 263 P~----~~~---yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 263 PN----SSR---YSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred CC----CCC---ccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 21 111 3456778999999999999999999999987653
|
|
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=319.08 Aligned_cols=247 Identities=19% Similarity=0.218 Sum_probs=195.3
Q ss_pred chhhhhhcCCCCCccEEEEcCCC-cEEEEEEeecc-chhHHHHHHHHHHHhccC-CCCceeEEEE-EEc------CCcee
Q 005177 448 STECEEAARPQSAAGCKAVLPTG-ITVSVKKIEWG-ATRIKIVSEFITRIGTVR-HKNLIRLLGF-CYN------RHQAY 517 (710)
Q Consensus 448 ~~~~~~ig~g~~g~vy~~~~~~g-~~vAvK~l~~~-~~~~~~~~~e~~~l~~l~-H~niv~l~g~-~~~------~~~~~ 517 (710)
.+..+.|.+|||+.||.|....+ ..+|+|++-.. ....+.+.+||++|++++ |||||.+++. ... .-+++
T Consensus 39 v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Evl 118 (738)
T KOG1989|consen 39 VTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVL 118 (738)
T ss_pred EEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEE
Confidence 33678899999999999997554 99999998753 445778899999999998 9999999993 322 13789
Q ss_pred EEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccc
Q 005177 518 LLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~ 593 (710)
|.||||++|+|-|++.. .+...+.++|+.++++|+++||. +.|+|||||||.+||||+.++..||||||-|...-
T Consensus 119 lLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~ 197 (738)
T KOG1989|consen 119 LLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKI 197 (738)
T ss_pred eehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEeCccccccccc
Confidence 99999999999999864 56789999999999999999998 47899999999999999999999999999764321
Q ss_pred ccC-C----------CCcccccccCchhh---hhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccc
Q 005177 594 LAD-G----------SFPAKIAWTESGEF---YNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMY 659 (710)
Q Consensus 594 ~~~-~----------~~~~~~~~~~~~e~---~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~ 659 (710)
... . ....+++-|++||. +.+...++|+|||++||+||-|+....||++...+ .+.
T Consensus 198 ~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l----------aIl 267 (738)
T KOG1989|consen 198 LSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL----------AIL 267 (738)
T ss_pred CCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce----------eEE
Confidence 110 0 01123444677775 45678999999999999999999999999866433 222
Q ss_pred cccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 660 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
+..... +..+.....+.+|+..||+.+|.+||++-+|+..+.++..
T Consensus 268 ng~Y~~--P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 268 NGNYSF--PPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred eccccC--CCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence 322111 2223456677889999999999999999999999887753
|
|
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=306.24 Aligned_cols=237 Identities=15% Similarity=0.108 Sum_probs=181.1
Q ss_pred hhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 453 EAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
.||+|+||.||++.. .+++.||||.++... ...+.+.+|+.++.++ +||||+++++++.+.+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGG 81 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence 589999999999985 568899999998642 2345577888888887 5999999999999999999999999999
Q ss_pred Chhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--CCccc
Q 005177 527 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAK 602 (710)
Q Consensus 527 sL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--~~~~~ 602 (710)
+|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....+
T Consensus 82 ~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (327)
T cd05617 82 DLMFHMQRQRKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCG 158 (327)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccC
Confidence 99988854 578999999999999999999998 999999999999999999999999999875321111 11123
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
...|.+||+.....++.++|||||||++|||+||+.||................+.........+.. ....+.+++.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~~li~ 235 (327)
T cd05617 159 TPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRF---LSVKASHVLK 235 (327)
T ss_pred CcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCC---CCHHHHHHHH
Confidence 4457788988888889999999999999999999999863221111000000111111110111111 1244668889
Q ss_pred hcCCCCCCCCCCH
Q 005177 683 LCTRSTPSDRPSM 695 (710)
Q Consensus 683 ~Cl~~~p~~RPs~ 695 (710)
+|++.||++||++
T Consensus 236 ~~L~~dP~~R~~~ 248 (327)
T cd05617 236 GFLNKDPKERLGC 248 (327)
T ss_pred HHhccCHHHcCCC
Confidence 9999999999984
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-34 Score=294.39 Aligned_cols=235 Identities=17% Similarity=0.233 Sum_probs=177.5
Q ss_pred hhhcCCCCCccEEEEcCC-------------CcEEEEEEeeccch-hHHHHHHHHHHHhccCCCCceeEEEEEEcCCcee
Q 005177 452 EEAARPQSAAGCKAVLPT-------------GITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~~~-------------g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 517 (710)
+.+|+|+||.||+|...+ ...||+|.+..... ....+.+|+.+++.++|||||++++++.++...+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 358999999999998532 23689998875433 2456788899999999999999999999999999
Q ss_pred EEEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc-------eEEcccC
Q 005177 518 LLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME-------PHLAEFG 587 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~-------~kl~DfG 587 (710)
+||||+++|+|..+++. ..++..+.+++.|+++||+|||+. +|+||||||+|||++.++. +|++|||
T Consensus 81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g 157 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKLSDPG 157 (262)
T ss_pred EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence 99999999999998864 468889999999999999999998 9999999999999987654 8999999
Q ss_pred ccccccccCCCCcccccccCchhhhh-ccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccC
Q 005177 588 FKYLTQLADGSFPAKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVG 665 (710)
Q Consensus 588 la~~~~~~~~~~~~~~~~~~~~e~~~-~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (710)
++....... ....+.. +.+||... ...++.++|||||||++|||++ |+.|+........ ..........
T Consensus 158 ~~~~~~~~~-~~~~~~~-y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-------~~~~~~~~~~ 228 (262)
T cd05077 158 IPITVLSRQ-ECVERIP-WIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK-------ERFYEGQCML 228 (262)
T ss_pred CCccccCcc-ccccccc-ccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH-------HHHHhcCccC
Confidence 986543221 1112334 55667665 4568889999999999999985 6666543211100 0001111001
Q ss_pred CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 005177 666 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLL 702 (710)
Q Consensus 666 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L 702 (710)
..+ ....+.+++.+||+.||++||++.|+++.+
T Consensus 229 ~~~----~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 229 VTP----SCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred CCC----ChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 011 124567899999999999999999998876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=299.01 Aligned_cols=250 Identities=18% Similarity=0.261 Sum_probs=189.7
Q ss_pred hhhhhcCCCCCccEEEEc-----CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcC--CceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVL-----PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-----~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ 520 (710)
....||+|+||.||.+.. .++..||+|.++... ...+.+.+|++++++++||||+++++++... ...++||
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 87 (284)
T cd05079 8 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIM 87 (284)
T ss_pred hceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEE
Confidence 667899999999999973 468899999987542 2356788999999999999999999999875 5689999
Q ss_pred eecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 521 DYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 521 Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
||+++|+|.+++.. ..+|..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 88 e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~ 164 (284)
T cd05079 88 EFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE 164 (284)
T ss_pred EccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCccccccccCcc
Confidence 99999999999864 468999999999999999999998 999999999999999999999999999876532211
Q ss_pred C-----CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc---------ccccccccccccccc
Q 005177 598 S-----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------KPIDGLLGEMYNENE 663 (710)
Q Consensus 598 ~-----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~---------~~~~~~~~~~~~~~~ 663 (710)
. ...+...+.+||+.....++.++|||||||++|||+|++.|......... ...........+...
T Consensus 165 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (284)
T cd05079 165 YYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKR 244 (284)
T ss_pred ceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCcc
Confidence 1 11122235677877777788999999999999999998766432111000 000000000000110
Q ss_pred cCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 664 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 664 ~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
. +........+.+++.+|++.+|++|||+.|+++.|+++
T Consensus 245 ~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 245 L---PRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred C---CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 0 11112345688999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=310.60 Aligned_cols=254 Identities=20% Similarity=0.223 Sum_probs=190.8
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcC----
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR---- 513 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~---- 513 (710)
+.+.|. ..+.||+|+||.||++.. .+++.||||++... ....+.+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 92 (355)
T cd07874 15 VLKRYQ--NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLE 92 (355)
T ss_pred hhhcee--EEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccc
Confidence 455666 778999999999999985 57889999999753 22355677899999999999999999998653
Q ss_pred --CceeEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 514 --HQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 514 --~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
...++||||++ +++.+.+...+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 93 ~~~~~~lv~e~~~-~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg~~~~ 168 (355)
T cd07874 93 EFQDVYLVMELMD-ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART 168 (355)
T ss_pred ccceeEEEhhhhc-ccHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCccccc
Confidence 35799999997 478888877788999999999999999999998 999999999999999999999999999976
Q ss_pred ccccCCC-CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc----------------cc
Q 005177 592 TQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID----------------GL 654 (710)
Q Consensus 592 ~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~----------------~~ 654 (710)
....... ...+...+.+||...+..++.++|||||||++|||++|+.||.+......+... ..
T Consensus 169 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (355)
T cd07874 169 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 248 (355)
T ss_pred CCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHH
Confidence 5322111 112344577889888888899999999999999999999998743311110000 00
Q ss_pred ccccccccc---------------cC-CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 655 LGEMYNENE---------------VG-SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 655 ~~~~~~~~~---------------~~-~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.....+..+ .. ...........+.+++.+|++.||++|||+.|++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 249 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 000000000 00 000001123456799999999999999999999875
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=311.00 Aligned_cols=191 Identities=13% Similarity=0.120 Sum_probs=163.3
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||++.. .+|+.||||.++... .....+.+|++++.+++|||||++++++.+++..|+||||++
T Consensus 5 ~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~ 84 (363)
T cd05628 5 SLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLP 84 (363)
T ss_pred EeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCC
Confidence 678899999999999975 578999999997532 224567889999999999999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-----
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG----- 597 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~----- 597 (710)
+|+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 85 gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~ 161 (363)
T cd05628 85 GGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYR 161 (363)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCcccccccccccccc
Confidence 9999999965 567888999999999999999998 999999999999999999999999999875321100
Q ss_pred --------------------------------CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCC
Q 005177 598 --------------------------------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAG 643 (710)
Q Consensus 598 --------------------------------~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~ 643 (710)
....++..|.+||+.....++.++|||||||++|||++|+.||.+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~ 239 (363)
T cd05628 162 NLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSE 239 (363)
T ss_pred cccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCC
Confidence 0012344577889888888899999999999999999999999744
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=301.97 Aligned_cols=248 Identities=17% Similarity=0.183 Sum_probs=187.9
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.+|+|+||.||++.. .+|..+|+|.+..... ..+.+.+|++++.+++||||++++++|.+++..++||||+++|
T Consensus 5 ~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~ 84 (308)
T cd06615 5 KLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 84 (308)
T ss_pred EEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCC
Confidence 678899999999999985 5788999999875422 2456888999999999999999999999999999999999999
Q ss_pred Chhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCccccc
Q 005177 527 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIA 604 (710)
Q Consensus 527 sL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 604 (710)
+|.++++. ..++.....++.|+++||+|||+.+ +++||||||+||+++.++.+||+|||+++...........+..
T Consensus 85 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 162 (308)
T cd06615 85 SLDQVLKKAGRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 162 (308)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCcccccccccccCCCCc
Confidence 99999965 4578888999999999999999732 8999999999999999999999999998754322111112233
Q ss_pred ccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccc-cccccc---------------------------
Q 005177 605 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP-IDGLLG--------------------------- 656 (710)
Q Consensus 605 ~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~-~~~~~~--------------------------- 656 (710)
.+.+||...+..++.++|||||||++|||+||+.|+.......... ......
T Consensus 163 ~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (308)
T cd06615 163 SYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFEL 242 (308)
T ss_pred CccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHH
Confidence 4667888777778889999999999999999999986322110000 000000
Q ss_pred --ccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 657 --EMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 657 --~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..........+ .......+.+++.+|+..+|++||++.|+++.
T Consensus 243 ~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 243 LDYIVNEPPPKLP--SGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred HHHHhcCCCccCc--CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000000000 00122357799999999999999999999876
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-34 Score=293.02 Aligned_cols=243 Identities=18% Similarity=0.266 Sum_probs=191.6
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.+|+|+||.||++...++..+|+|.+..+....+.+.+|++++++++|+||+++++++.+ +..++||||+++|+|.
T Consensus 10 ~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~ 88 (260)
T cd05073 10 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLL 88 (260)
T ss_pred EEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCCCcHH
Confidence 678899999999999998788889999998665566778899999999999999999999887 7789999999999999
Q ss_pred hhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCc---cc
Q 005177 530 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFP---AK 602 (710)
Q Consensus 530 ~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~---~~ 602 (710)
+++.. ..++.++..++.|++.||+|||+. +++||||||+||+++.++.+|++|||.++.......... ..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~ 165 (260)
T cd05073 89 DFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF 165 (260)
T ss_pred HHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCcc
Confidence 99965 357888999999999999999988 999999999999999999999999999875432111111 11
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHH
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 681 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 681 (710)
...+.+||+.....++.++|||||||++||++| |+.|+........ .....+... .. ........+.+++
T Consensus 166 ~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~---~~~~~~~~~---~~---~~~~~~~~~~~~i 236 (260)
T cd05073 166 PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV---IRALERGYR---MP---RPENCPEELYNIM 236 (260)
T ss_pred cccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHH---HHHHhCCCC---CC---CcccCCHHHHHHH
Confidence 123667888877778889999999999999999 7777753221100 000000000 00 0112234677899
Q ss_pred hhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 682 LLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 682 ~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
.+|++.+|++||++.++.+.|+.+
T Consensus 237 ~~~l~~~p~~Rp~~~~l~~~L~~~ 260 (260)
T cd05073 237 MRCWKNRPEERPTFEYIQSVLDDF 260 (260)
T ss_pred HHHcccCcccCcCHHHHHHHHhcC
Confidence 999999999999999999999753
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=299.29 Aligned_cols=252 Identities=19% Similarity=0.269 Sum_probs=192.5
Q ss_pred hhhhhcCCCCCccEEEEc-----CCCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEc--CCceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVL-----PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-----~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~lv~ 520 (710)
..+.+|+|+||.||+|.. .++..||||.++.... ..+.+.+|++.+++++||||+++++++.. +...++||
T Consensus 8 ~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 87 (284)
T cd05038 8 FIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIM 87 (284)
T ss_pred hheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEE
Confidence 567899999999999985 3478999999986544 36789999999999999999999999987 55789999
Q ss_pred eecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 521 DYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 521 Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
||+++|+|.+++.. ..+|..+..++.|++.||+|||+. +|+||||||+||+++.++.+|++|||++........
T Consensus 88 e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 164 (284)
T cd05038 88 EYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKD 164 (284)
T ss_pred ecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccccccccccCCc
Confidence 99999999999965 368999999999999999999998 999999999999999999999999999876542211
Q ss_pred CC-----cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCC-cccc-------ccccccccccccc
Q 005177 598 SF-----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ-NKPI-------DGLLGEMYNENEV 664 (710)
Q Consensus 598 ~~-----~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~-~~~~-------~~~~~~~~~~~~~ 664 (710)
.. ......+.+||......++.++|||||||+++||+||+.|+....... .+.. .....+..... .
T Consensus 165 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 243 (284)
T cd05038 165 YYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEG-E 243 (284)
T ss_pred ceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcC-C
Confidence 10 111122446677666778889999999999999999998876322111 0000 00000111111 0
Q ss_pred CCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 665 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 665 ~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
. .+........+.+++.+|++.+|++||||.||+++|+.++
T Consensus 244 ~-~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 244 R-LPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred c-CCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 0 0001112246788999999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-34 Score=296.80 Aligned_cols=246 Identities=17% Similarity=0.227 Sum_probs=189.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCc----EEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGI----TVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~----~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
..+.||+|+||.||+|.. ++|. .||+|.++.. ....+.+.+|+.++..+.||||++++++|.. ...+++|||
T Consensus 11 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~~~~ 89 (279)
T cd05109 11 KVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLVTQL 89 (279)
T ss_pred eeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEEEEc
Confidence 678899999999999974 4554 4899998753 2335678889999999999999999999975 457899999
Q ss_pred cCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC
Q 005177 523 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 599 (710)
Q Consensus 523 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 599 (710)
+++|+|.++++. ..++.....++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++.........
T Consensus 90 ~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~ 166 (279)
T cd05109 90 MPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEY 166 (279)
T ss_pred CCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceeeccccccee
Confidence 999999999965 468889999999999999999998 99999999999999999999999999988654221111
Q ss_pred ----cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 600 ----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 600 ----~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
......+.+||......++.++|||||||++|||+| |..|+....... .......... .. ......
T Consensus 167 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~~~~~~~---~~---~~~~~~ 237 (279)
T cd05109 167 HADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE---IPDLLEKGER---LP---QPPICT 237 (279)
T ss_pred ecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHHCCCc---CC---CCccCC
Confidence 111223667787777788999999999999999999 777765322100 0000111000 00 011123
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCCC
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 708 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~ 708 (710)
..+.+++.+||+.||++||++.|+++.|+.+...
T Consensus 238 ~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 238 IDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 4577899999999999999999999999887643
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=298.42 Aligned_cols=246 Identities=16% Similarity=0.217 Sum_probs=191.5
Q ss_pred hhhhhcCCCCCccEEEEcCC-----CcEEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEc-CCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVLPT-----GITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYN-RHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~-----g~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-~~~~~lv~E 521 (710)
..+.||+|+||.||+|.... +..||+|++... ....+.+.+|+.++++++||||+++++++.. ++..++++|
T Consensus 10 ~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 89 (280)
T cd05043 10 LSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYP 89 (280)
T ss_pred EeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEE
Confidence 66889999999999998754 789999998753 2346678889999999999999999999876 467899999
Q ss_pred ecCCCChhhhhhc----------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 522 YLPNGNLSEKIRT----------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 522 y~~~gsL~~~l~~----------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
|+++|+|.+++.. .+++.++..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.
T Consensus 90 ~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d~g~~~~ 166 (280)
T cd05043 90 YMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITDNALSRD 166 (280)
T ss_pred cCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECCCCCccc
Confidence 9999999999854 357888999999999999999998 999999999999999999999999999975
Q ss_pred ccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCC
Q 005177 592 TQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGS 666 (710)
Q Consensus 592 ~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (710)
....... .......+.+||......++.++|||||||++||+++ |+.|+...... ... . .+.+......
T Consensus 167 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~~~--~---~~~~~~~~~~ 240 (280)
T cd05043 167 LFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF-EMA--A---YLKDGYRLAQ 240 (280)
T ss_pred ccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH-HHH--H---HHHcCCCCCC
Confidence 4321111 1111223567788777788999999999999999999 88888643211 100 0 0001100010
Q ss_pred CcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 667 SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 667 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
.. .....+.+++.+||..+|++|||+.|+++.|+++..
T Consensus 241 ~~---~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 241 PI---NCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred CC---cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 11 112456789999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=308.44 Aligned_cols=243 Identities=15% Similarity=0.067 Sum_probs=184.8
Q ss_pred hhhhhcCCCCCccEEEEc----CCCcEEEEEEeeccc-----hhHHHHHHHHHHHhccC-CCCceeEEEEEEcCCceeEE
Q 005177 450 ECEEAARPQSAAGCKAVL----PTGITVSVKKIEWGA-----TRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~----~~g~~vAvK~l~~~~-----~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv 519 (710)
..+.||+|+||.||++.. .+|+.||+|.+.... ...+.+.+|++++.+++ ||||+++++++..++..++|
T Consensus 4 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (332)
T cd05614 4 LLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLI 83 (332)
T ss_pred EEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEE
Confidence 567899999999999874 468999999997532 22455778999999995 99999999999999999999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
|||+++|+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 84 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~ 160 (332)
T cd05614 84 LDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEK 160 (332)
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCccccccCC
Confidence 999999999999864 567888899999999999999998 999999999999999999999999999875432211
Q ss_pred C---CcccccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 598 S---FPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 598 ~---~~~~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
. ...++..|.+||..... .++.++|||||||++|||+||+.|+........ .......+.... ...+. ..
T Consensus 161 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~--~~~~~~~~~~~~-~~~~~---~~ 234 (332)
T cd05614 161 ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT--QSEVSRRILKCD-PPFPS---FI 234 (332)
T ss_pred CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC--HHHHHHHHhcCC-CCCCC---CC
Confidence 1 11234457788877654 478889999999999999999999863321110 000001111111 01011 12
Q ss_pred HHHHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRP-----SMEEALKL 701 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RP-----s~~evl~~ 701 (710)
...+.+++.+|++.||++|| +++|++++
T Consensus 235 ~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 235 GPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred CHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 34567888999999999999 67777653
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=307.40 Aligned_cols=231 Identities=15% Similarity=0.095 Sum_probs=177.0
Q ss_pred hhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHH-HHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 453 EAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFI-TRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~-~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
.||+|+||.||+|.. .+|+.||+|.+..... ..+.+.+|+ .+++.++|||||++++++.+.+..++||||+++|
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGG 81 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 689999999999986 5789999999975321 233344444 4678899999999999999999999999999999
Q ss_pred Chhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Cccc
Q 005177 527 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAK 602 (710)
Q Consensus 527 sL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~~ 602 (710)
+|.+.+.. .........++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ ...+
T Consensus 82 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (321)
T cd05603 82 ELFFHLQRERCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCG 158 (321)
T ss_pred CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccC
Confidence 99988865 456777888999999999999998 9999999999999999999999999998753211111 1123
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
...|.+||......++.++|||||||++|||++|+.|+....... ....+.... ...+. .....+.+++.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~------~~~~i~~~~-~~~~~---~~~~~~~~li~ 228 (321)
T cd05603 159 TPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQ------MYDNILHKP-LQLPG---GKTVAACDLLV 228 (321)
T ss_pred CcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHH------HHHHHhcCC-CCCCC---CCCHHHHHHHH
Confidence 445778888887788999999999999999999999986432110 011111111 11111 12345678899
Q ss_pred hcCCCCCCCCCCHH
Q 005177 683 LCTRSTPSDRPSME 696 (710)
Q Consensus 683 ~Cl~~~p~~RPs~~ 696 (710)
+|++.||++||++.
T Consensus 229 ~~l~~~p~~R~~~~ 242 (321)
T cd05603 229 GLLHKDQRRRLGAK 242 (321)
T ss_pred HHccCCHhhcCCCC
Confidence 99999999999754
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=309.26 Aligned_cols=254 Identities=20% Similarity=0.233 Sum_probs=190.4
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcCC---
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH--- 514 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~--- 514 (710)
+.+.|. ..+.||+|+||.||++.. .+|..||||++... ....+.+.+|+.++++++||||+++++++...+
T Consensus 19 ~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 96 (359)
T cd07876 19 VLKRYQ--QLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLE 96 (359)
T ss_pred hhhceE--EEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcc
Confidence 455676 778999999999999985 67899999999753 223556778999999999999999999986543
Q ss_pred ---ceeEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 515 ---QAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 515 ---~~~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
..|+||||+++ ++.+.++...++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 97 ~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~ 172 (359)
T cd07876 97 EFQDVYLVMELMDA-NLCQVIHMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART 172 (359)
T ss_pred ccceeEEEEeCCCc-CHHHHHhccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCCccc
Confidence 47999999974 67777777788888999999999999999998 999999999999999999999999999875
Q ss_pred ccccCCC-CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc----------------cc
Q 005177 592 TQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID----------------GL 654 (710)
Q Consensus 592 ~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~----------------~~ 654 (710)
....... ...+...|.+||...+..++.++||||+||++|||+||+.||.+......+... ..
T Consensus 173 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (359)
T cd07876 173 ACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPT 252 (359)
T ss_pred cccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 4322111 112344577888888888899999999999999999999998744321111000 00
Q ss_pred ccccccccccCCC----------------cchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 655 LGEMYNENEVGSS----------------SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 655 ~~~~~~~~~~~~~----------------~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
............. .........+.+++.+|++.||++|||+.|++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 253 VRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000000000000 0000112456789999999999999999999874
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=297.89 Aligned_cols=240 Identities=18% Similarity=0.218 Sum_probs=190.3
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.||+|+||.||+|.. .+|..||+|.+.... ...+.+.+|++++++++||||+++++++..++..++||||+++|
T Consensus 8 ~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 87 (277)
T cd06642 8 KLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGG 87 (277)
T ss_pred HHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCC
Confidence 678899999999999985 568899999987432 33567889999999999999999999999999999999999999
Q ss_pred Chhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Ccccc
Q 005177 527 NLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAKI 603 (710)
Q Consensus 527 sL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~~~ 603 (710)
+|.+++.. ..++.....++.|+++|++|||+. +++|+||||+||++++++.++++|||+++........ ...+.
T Consensus 88 ~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 164 (277)
T cd06642 88 SALDLLKPGPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGT 164 (277)
T ss_pred cHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcchhhhcccCc
Confidence 99999875 468888999999999999999998 9999999999999999999999999998764322111 11123
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 683 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 683 (710)
.++.+||+.....++.++|||||||++|||+||+.|+........ ........ . +.........+.+++.+
T Consensus 165 ~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~------~~~~~~~~-~--~~~~~~~~~~~~~li~~ 235 (277)
T cd06642 165 PFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV------LFLIPKNS-P--PTLEGQYSKPFKEFVEA 235 (277)
T ss_pred ccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH------HhhhhcCC-C--CCCCcccCHHHHHHHHH
Confidence 446788888877888999999999999999999998763321110 00110110 0 00011223457789999
Q ss_pred cCCCCCCCCCCHHHHHHH
Q 005177 684 CTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 684 Cl~~~p~~RPs~~evl~~ 701 (710)
|++.+|++||+|.|++++
T Consensus 236 ~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 236 CLNKDPRFRPTAKELLKH 253 (277)
T ss_pred HccCCcccCcCHHHHHHh
Confidence 999999999999999874
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-35 Score=309.26 Aligned_cols=234 Identities=15% Similarity=0.096 Sum_probs=179.3
Q ss_pred hhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHH-HHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 453 EAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFIT-RIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~-~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
.||+|+||.||+|.. .+|+.||||.+.... ...+.+..|.. +++.++||||+++++++..++..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGG 81 (325)
T ss_pred ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCC
Confidence 589999999999985 679999999997532 12334444444 567899999999999999999999999999999
Q ss_pred Chhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--CCccc
Q 005177 527 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAK 602 (710)
Q Consensus 527 sL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--~~~~~ 602 (710)
+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++....... ....+
T Consensus 82 ~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (325)
T cd05604 82 ELFFHLQRERSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCG 158 (325)
T ss_pred CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccC
Confidence 99988865 467888899999999999999998 999999999999999999999999999875321111 11123
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
...|.+||......++.++|||||||++|||++|+.|+....... ....+.... ....+. ....+.+++.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~------~~~~~~~~~-~~~~~~---~~~~~~~ll~ 228 (325)
T cd05604 159 TPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE------MYDNILHKP-LVLRPG---ASLTAWSILE 228 (325)
T ss_pred ChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHH------HHHHHHcCC-ccCCCC---CCHHHHHHHH
Confidence 445778898888888999999999999999999999987432111 011111111 111111 2245668889
Q ss_pred hcCCCCCCCCCCHHHHH
Q 005177 683 LCTRSTPSDRPSMEEAL 699 (710)
Q Consensus 683 ~Cl~~~p~~RPs~~evl 699 (710)
+|++.+|++||++++.+
T Consensus 229 ~ll~~~p~~R~~~~~~~ 245 (325)
T cd05604 229 ELLEKDRQRRLGAKEDF 245 (325)
T ss_pred HHhccCHHhcCCCCCCH
Confidence 99999999999886433
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-34 Score=292.86 Aligned_cols=242 Identities=21% Similarity=0.282 Sum_probs=190.7
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.+|+|++|.||++...++..+|+|.+.........+.+|++++++++||||+++++++......++||||+++|+|.
T Consensus 8 ~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~ 87 (256)
T cd05112 8 LVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLS 87 (256)
T ss_pred EEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHH
Confidence 55789999999999998877889999999866555677899999999999999999999999999999999999999999
Q ss_pred hhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCc---ccc
Q 005177 530 EKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFP---AKI 603 (710)
Q Consensus 530 ~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~---~~~ 603 (710)
+++.. ..++.....++.+++.|++|||+. +++||||||+||+++.++.+||+|||+++.......... ...
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 164 (256)
T cd05112 88 DYLRAQRGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFP 164 (256)
T ss_pred HHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCcccccCCCccc
Confidence 99864 368888999999999999999998 999999999999999999999999999875432111111 111
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
..+.+||......++.++|||||||++|||++ |+.|+...... . .............+.. ....+.+++.
T Consensus 165 ~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-~-----~~~~~~~~~~~~~~~~---~~~~~~~l~~ 235 (256)
T cd05112 165 VKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS-E-----VVETINAGFRLYKPRL---ASQSVYELMQ 235 (256)
T ss_pred hhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH-H-----HHHHHhCCCCCCCCCC---CCHHHHHHHH
Confidence 23667888777788889999999999999998 77777532210 0 0001100000000111 1246788999
Q ss_pred hcCCCCCCCCCCHHHHHHHHh
Q 005177 683 LCTRSTPSDRPSMEEALKLLS 703 (710)
Q Consensus 683 ~Cl~~~p~~RPs~~evl~~L~ 703 (710)
+||+.+|++|||+.|++++|.
T Consensus 236 ~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 236 HCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred HHcccChhhCCCHHHHHHhhC
Confidence 999999999999999998873
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=300.01 Aligned_cols=249 Identities=20% Similarity=0.186 Sum_probs=184.9
Q ss_pred hhhhhcCCCCCccEEEEc-----------------CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEE
Q 005177 450 ECEEAARPQSAAGCKAVL-----------------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFC 510 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-----------------~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~ 510 (710)
..+.+|+|+||.||++.. .++..||+|.++... ...+.+.+|++++++++||||+++++++
T Consensus 9 ~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~ 88 (296)
T cd05095 9 FKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVC 88 (296)
T ss_pred eeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence 667899999999999752 234579999997542 2356788999999999999999999999
Q ss_pred EcCCceeEEEeecCCCChhhhhhc-------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC
Q 005177 511 YNRHQAYLLYDYLPNGNLSEKIRT-------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 577 (710)
Q Consensus 511 ~~~~~~~lv~Ey~~~gsL~~~l~~-------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~ 577 (710)
...+..++||||+++|+|.+++.. ..++.+..+++.|++.|++|||+. +|+||||||+||+++.
T Consensus 89 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~Nili~~ 165 (296)
T cd05095 89 ITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRNCLVGK 165 (296)
T ss_pred ecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChheEEEcC
Confidence 999999999999999999999864 245778899999999999999998 9999999999999999
Q ss_pred CCceEEcccCccccccccCCCC----cccccccCchhhhhccCCccccceeeHHHHHHHHHh--CCCCCCCCCCCCcccc
Q 005177 578 NMEPHLAEFGFKYLTQLADGSF----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT--NGRLTNAGSSLQNKPI 651 (710)
Q Consensus 578 ~~~~kl~DfGla~~~~~~~~~~----~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt--g~~p~~~~~~~~~~~~ 651 (710)
++.++++|||+++......... ......+.+||......++.++|||||||++|||+| |..|+...........
T Consensus 166 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~ 245 (296)
T cd05095 166 NYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIEN 245 (296)
T ss_pred CCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHH
Confidence 9999999999987543211100 111122456676666778999999999999999998 5566643221110000
Q ss_pred c-ccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhc
Q 005177 652 D-GLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 704 (710)
Q Consensus 652 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~ 704 (710)
. ..............+. .....+.+++.+||+.||++||+|.||++.|++
T Consensus 246 ~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 246 TGEFFRDQGRQVYLPKPA---LCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred HHHHHhhccccccCCCCC---CCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 0 0000000000001011 122567789999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=313.92 Aligned_cols=242 Identities=13% Similarity=0.071 Sum_probs=183.4
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||++.. .+|+.||||.+.... ...+.+.+|++++++++|||||++++++.+.+..|+||||++
T Consensus 5 ~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~ 84 (377)
T cd05629 5 TVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLP 84 (377)
T ss_pred EeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCC
Confidence 668899999999999974 689999999997532 224567889999999999999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC------
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD------ 596 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~------ 596 (710)
+|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+|++|||+++......
T Consensus 85 gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 161 (377)
T cd05629 85 GGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQ 161 (377)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccccccccccccccccc
Confidence 9999999865 456777888999999999999998 99999999999999999999999999986321100
Q ss_pred -------C------------------------------------CCcccccccCchhhhhccCCccccceeeHHHHHHHH
Q 005177 597 -------G------------------------------------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEI 633 (710)
Q Consensus 597 -------~------------------------------------~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~El 633 (710)
. ....++..|.+||+.....++.++|||||||++|||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~el 241 (377)
T cd05629 162 KLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFEC 241 (377)
T ss_pred ccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhh
Confidence 0 001134457788988888899999999999999999
Q ss_pred HhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCC---CCHHHHHHH
Q 005177 634 LTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDR---PSMEEALKL 701 (710)
Q Consensus 634 ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~R---Ps~~evl~~ 701 (710)
+||+.||........ ..... ........+.. ......+.+++.+|+. +|.+| |++.|++++
T Consensus 242 ltG~~Pf~~~~~~~~--~~~i~-~~~~~~~~p~~---~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 242 LIGWPPFCSENSHET--YRKII-NWRETLYFPDD---IHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred hcCCCCCCCCCHHHH--HHHHH-ccCCccCCCCC---CCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 999999864332110 00000 00000000100 0112346677788887 66665 699998875
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=313.88 Aligned_cols=241 Identities=15% Similarity=0.129 Sum_probs=181.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|.. .+++.||||.+.... ...+.+.+|++++++++|||||++++++.+++..|+|||||+
T Consensus 5 ~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~ 84 (382)
T cd05625 5 KIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIP 84 (382)
T ss_pred EEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCC
Confidence 678899999999999985 678999999997532 234568889999999999999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC------
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD------ 596 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~------ 596 (710)
+|+|.+++.. ..+......++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 85 gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~ 161 (382)
T cd05625 85 GGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ 161 (382)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCccccccccccccc
Confidence 9999999865 356777788999999999999998 99999999999999999999999999975321000
Q ss_pred -------------------------------------------CCCcccccccCchhhhhccCCccccceeeHHHHHHHH
Q 005177 597 -------------------------------------------GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEI 633 (710)
Q Consensus 597 -------------------------------------------~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~El 633 (710)
.....++..|.+||+.....++.++||||+||++|||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~el 241 (382)
T cd05625 162 SGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 241 (382)
T ss_pred cccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHH
Confidence 0001134457788988888899999999999999999
Q ss_pred HhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCC---HHHHHH
Q 005177 634 LTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPS---MEEALK 700 (710)
Q Consensus 634 ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs---~~evl~ 700 (710)
+||+.||........ ...... .......+ ........+.+++.+++ .+|++|++ +.|+++
T Consensus 242 ltG~~Pf~~~~~~~~--~~~i~~-~~~~~~~p---~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 304 (382)
T cd05625 242 LVGQPPFLAQTPLET--QMKVIN-WQTSLHIP---PQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKA 304 (382)
T ss_pred HhCCCCCCCCCHHHH--HHHHHc-cCCCcCCC---CcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence 999999875432110 000000 00000001 00111233445555544 49999997 777765
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-34 Score=293.34 Aligned_cols=243 Identities=19% Similarity=0.264 Sum_probs=193.8
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.+|+|++|.||+|...++..||||.+.......+.+.+|++.+++++||||+++++++..++..++||||+++++|.
T Consensus 10 i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~ 89 (261)
T cd05034 10 LERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLL 89 (261)
T ss_pred eeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCHH
Confidence 66789999999999999888889999999876666778999999999999999999999999989999999999999999
Q ss_pred hhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC---Cccc
Q 005177 530 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS---FPAK 602 (710)
Q Consensus 530 ~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~---~~~~ 602 (710)
+++.. .+++.++..++.+++.|++|||+. +|+|+||||+||++++++.+|++|||+++........ ....
T Consensus 90 ~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 166 (261)
T cd05034 90 DFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKF 166 (261)
T ss_pred HHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccchhhhhhhccCC
Confidence 99965 468999999999999999999998 9999999999999999999999999998765321110 0001
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHH
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 681 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 681 (710)
...+.+||......++.++|||||||+++||+| |+.|+.+.... ... ..+........+. +....+.+++
T Consensus 167 ~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~~----~~~~~~~~~~~~~---~~~~~~~~~i 237 (261)
T cd05034 167 PIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR--EVL----EQVERGYRMPRPP---NCPEELYDLM 237 (261)
T ss_pred CccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHH----HHHHcCCCCCCCC---CCCHHHHHHH
Confidence 123667888877788999999999999999999 88877532211 001 1111100001011 1134577899
Q ss_pred hhcCCCCCCCCCCHHHHHHHHhc
Q 005177 682 LLCTRSTPSDRPSMEEALKLLSG 704 (710)
Q Consensus 682 ~~Cl~~~p~~RPs~~evl~~L~~ 704 (710)
.+|+..+|++||+++|+.+.|+.
T Consensus 238 ~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 238 LQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HHHcccCcccCCCHHHHHHHHhc
Confidence 99999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=296.12 Aligned_cols=243 Identities=18% Similarity=0.236 Sum_probs=175.1
Q ss_pred hhcCCCCCccEEEEcCC---CcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 453 EAARPQSAAGCKAVLPT---GITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~~~---g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
.||+|+||.||+|...+ ...+|+|.+.... .....+.+|++.++.++||||++++|+|.+.+..++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999997533 4578888876432 235568889999999999999999999999999999999999999
Q ss_pred hhhhhhcC-------CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC----
Q 005177 528 LSEKIRTK-------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD---- 596 (710)
Q Consensus 528 L~~~l~~~-------~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~---- 596 (710)
|.+++... .++.....++.|+++|++|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 99998652 24667789999999999999998 99999999999999999999999999986532211
Q ss_pred CCCcccccccCchhhhh-------ccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCc
Q 005177 597 GSFPAKIAWTESGEFYN-------AMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 668 (710)
Q Consensus 597 ~~~~~~~~~~~~~e~~~-------~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (710)
.........+.+||+.. ....+.++|||||||++|||++ |+.|+........ ........ +.. ...+.
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~--~~~~~~~~-~~~-~~~~~ 234 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQV--LKQVVREQ-DIK-LPKPQ 234 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHH--HHHHhhcc-Ccc-CCCCc
Confidence 01111122256677653 2346778999999999999999 5666653221110 00000000 000 00011
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHh
Q 005177 669 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 703 (710)
Q Consensus 669 ~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~ 703 (710)
........+.+++..|+ .||++|||++||++.|.
T Consensus 235 ~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 235 LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred ccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 11112234456777788 49999999999999874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=306.53 Aligned_cols=233 Identities=16% Similarity=0.130 Sum_probs=181.4
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
..+.||+|+||.||+|.. .+++.||||.+..... ..+.+..|.+++..+ +||+|+++++++.+.+..++||||+
T Consensus 4 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~ 83 (323)
T cd05616 4 FLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYV 83 (323)
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCC
Confidence 567899999999999985 5678999999986421 234456677777666 5899999999999999999999999
Q ss_pred CCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--CC
Q 005177 524 PNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SF 599 (710)
Q Consensus 524 ~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--~~ 599 (710)
++|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++....... ..
T Consensus 84 ~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~ 160 (323)
T cd05616 84 NGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKT 160 (323)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCcccc
Confidence 99999998865 568888999999999999999998 999999999999999999999999999875321111 11
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 679 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (710)
..+...|.+||+.....++.++|||||||++|||+||+.|+.+..... ....+.... ...+. .....+.+
T Consensus 161 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~------~~~~i~~~~-~~~p~---~~s~~~~~ 230 (323)
T cd05616 161 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE------LFQSIMEHN-VAYPK---SMSKEAVA 230 (323)
T ss_pred CCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHH------HHHHHHhCC-CCCCC---cCCHHHHH
Confidence 123455778898888889999999999999999999999987433211 111111111 11111 12345678
Q ss_pred HHhhcCCCCCCCCCCH
Q 005177 680 VALLCTRSTPSDRPSM 695 (710)
Q Consensus 680 l~~~Cl~~~p~~RPs~ 695 (710)
++.+|++.+|++|++.
T Consensus 231 li~~~l~~~p~~R~~~ 246 (323)
T cd05616 231 ICKGLMTKHPGKRLGC 246 (323)
T ss_pred HHHHHcccCHHhcCCC
Confidence 9999999999999984
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=307.06 Aligned_cols=234 Identities=15% Similarity=0.108 Sum_probs=178.0
Q ss_pred hhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHH-HHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 453 EAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEF-ITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e-~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
.||+|+||.||+|.. .++..||+|.+..... ....+.+| ..+++.++||||+++++++.+++..++||||+++|
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG 81 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCC
Confidence 689999999999985 5678999999975321 12233333 44567899999999999999999999999999999
Q ss_pred Chhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Cccc
Q 005177 527 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAK 602 (710)
Q Consensus 527 sL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~~ 602 (710)
+|.+++.. .........++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ ...+
T Consensus 82 ~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~g 158 (325)
T cd05602 82 ELFYHLQRERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCG 158 (325)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccC
Confidence 99999865 356677778999999999999998 9999999999999999999999999998753221111 1123
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
...|.+||+.....++.++||||+||++|||++|+.||....... ....+.... ....+ .....+.+++.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~------~~~~i~~~~-~~~~~---~~~~~~~~li~ 228 (325)
T cd05602 159 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE------MYDNILNKP-LQLKP---NITNSARHLLE 228 (325)
T ss_pred CccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH------HHHHHHhCC-cCCCC---CCCHHHHHHHH
Confidence 445778898888888999999999999999999999987432211 011111111 11111 12245668888
Q ss_pred hcCCCCCCCCCCHHHHH
Q 005177 683 LCTRSTPSDRPSMEEAL 699 (710)
Q Consensus 683 ~Cl~~~p~~RPs~~evl 699 (710)
+|++.+|++||++.+.+
T Consensus 229 ~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 229 GLLQKDRTKRLGAKDDF 245 (325)
T ss_pred HHcccCHHHCCCCCCCH
Confidence 99999999999877433
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=280.44 Aligned_cols=251 Identities=21% Similarity=0.234 Sum_probs=199.5
Q ss_pred hhhhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchh---------HHHHHHHHHHHhccC-CCCceeEEE
Q 005177 440 NDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATR---------IKIVSEFITRIGTVR-HKNLIRLLG 508 (710)
Q Consensus 440 ~~~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~---------~~~~~~e~~~l~~l~-H~niv~l~g 508 (710)
.+..+++. ..+++|+|..+.|-++.. ++|...|+|++...... .+.-.+|+.+|+++. ||+|+++.+
T Consensus 13 ~~fy~~y~--pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D 90 (411)
T KOG0599|consen 13 KGFYAKYE--PKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQD 90 (411)
T ss_pred hhHHhhcC--hHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeee
Confidence 44556666 889999999999988875 78899999999863221 334567899999875 999999999
Q ss_pred EEEcCCceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEccc
Q 005177 509 FCYNRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEF 586 (710)
Q Consensus 509 ~~~~~~~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df 586 (710)
+|+.+...++|+|.|+.|.|+|+|.. .++.....+|+.|+.+|++|||.. .|+|||+||+|||+|++.++||+||
T Consensus 91 ~yes~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDF 167 (411)
T KOG0599|consen 91 VYESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDF 167 (411)
T ss_pred eccCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEecc
Confidence 99999999999999999999999987 457777789999999999999999 9999999999999999999999999
Q ss_pred CccccccccCC-CCcccccccCchhhhh------ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccc
Q 005177 587 GFKYLTQLADG-SFPAKIAWTESGEFYN------AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMY 659 (710)
Q Consensus 587 Gla~~~~~~~~-~~~~~~~~~~~~e~~~------~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~ 659 (710)
|++.-.+.... ...++++.|-+||... ...|+..+|.||.|||+|.|+.|..||.....+ -.+..+.
T Consensus 168 GFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQm------lMLR~Im 241 (411)
T KOG0599|consen 168 GFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQM------LMLRMIM 241 (411)
T ss_pred ceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHH------HHHHHHH
Confidence 99876543211 1223556677777553 235677799999999999999999987532211 0122223
Q ss_pred cccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 660 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
........+.|.+....+-+++.+|++.||++|.|++|++.+
T Consensus 242 eGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 242 EGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred hcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 333233466778888889999999999999999999998863
|
|
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=301.67 Aligned_cols=248 Identities=16% Similarity=0.195 Sum_probs=191.7
Q ss_pred cCCchhhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccc--hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCc
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQ 515 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~ 515 (710)
.|. ..+.||+|+||.||++.. .++..||||.++... ...+.+.+|+++++++ +||||++++++|...+.
T Consensus 36 ~~~--~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 36 NLS--FGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HeE--EcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 355 678899999999999963 245689999987542 2356788999999999 79999999999999999
Q ss_pred eeEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 516 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
.++||||+++|+|.++++. .+++.+...++.|++.||+|||+. +|+|+||||+||+++.++.+|++|||+++.
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~ 190 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGLARD 190 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCccccc
Confidence 9999999999999999975 268999999999999999999998 999999999999999999999999999875
Q ss_pred ccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCC
Q 005177 592 TQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGS 666 (710)
Q Consensus 592 ~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (710)
....... .......+.+||......++.++|||||||++|||+| |+.|+........ ..+.........
T Consensus 191 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~------~~~~~~~~~~~~ 264 (302)
T cd05055 191 IMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK------FYKLIKEGYRMA 264 (302)
T ss_pred ccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH------HHHHHHcCCcCC
Confidence 4322111 0111233677888777778899999999999999998 8888753321110 001111110000
Q ss_pred CcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 667 SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 667 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
. .......+.+++.+|+..+|++|||+.|+++.|+++
T Consensus 265 ~--~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 265 Q--PEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred C--CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 0 011124677899999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-34 Score=290.91 Aligned_cols=240 Identities=17% Similarity=0.221 Sum_probs=190.8
Q ss_pred hhhhhcCCCCCccEEEEcC-CCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCCh
Q 005177 450 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
..+.+|+|++|.||+|... ++..+|+|.+..... .+.+.+|++.+++++||||+++++++.+++..+++|||+++++|
T Consensus 7 ~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L 85 (256)
T cd06612 7 ILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSV 85 (256)
T ss_pred hhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcH
Confidence 7788999999999999874 488999999986433 67899999999999999999999999999999999999999999
Q ss_pred hhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--CCcccc
Q 005177 529 SEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAKI 603 (710)
Q Consensus 529 ~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--~~~~~~ 603 (710)
.+++.. .+++.....++.|+++|+.|||+. +|+||||+|+||++++++.+||+|||++........ ....+.
T Consensus 86 ~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 162 (256)
T cd06612 86 SDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGT 162 (256)
T ss_pred HHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccCccccccccCC
Confidence 999853 568999999999999999999998 999999999999999999999999999876543221 111123
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 683 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 683 (710)
..+.+||+..+..++.++|||||||++|||+||+.|+.......... ...... .............+.+++.+
T Consensus 163 ~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~i~~ 235 (256)
T cd06612 163 PFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF------MIPNKP-PPTLSDPEKWSPEFNDFVKK 235 (256)
T ss_pred ccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh------hhccCC-CCCCCchhhcCHHHHHHHHH
Confidence 34677888888888999999999999999999999986432211100 000000 00001111223457788899
Q ss_pred cCCCCCCCCCCHHHHHH
Q 005177 684 CTRSTPSDRPSMEEALK 700 (710)
Q Consensus 684 Cl~~~p~~RPs~~evl~ 700 (710)
|++.+|++|||+.|+++
T Consensus 236 ~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 236 CLVKDPEERPSAIQLLQ 252 (256)
T ss_pred HHhcChhhCcCHHHHhc
Confidence 99999999999999976
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=307.19 Aligned_cols=247 Identities=21% Similarity=0.228 Sum_probs=185.9
Q ss_pred hhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccc--hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcC-CceeEE
Q 005177 450 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNR-HQAYLL 519 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~-~~~~lv 519 (710)
..+.||+|+||.||+|.. .+++.||||+++... .....+.+|++++.++ +|||||+++++|... ...++|
T Consensus 11 ~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv 90 (343)
T cd05103 11 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 90 (343)
T ss_pred ccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEE
Confidence 678999999999999962 467899999997643 2345678899999999 689999999988654 467999
Q ss_pred EeecCCCChhhhhhc-----------------------------------------------------------------
Q 005177 520 YDYLPNGNLSEKIRT----------------------------------------------------------------- 534 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~----------------------------------------------------------------- 534 (710)
|||+++|+|.++++.
T Consensus 91 ~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (343)
T cd05103 91 VEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQED 170 (343)
T ss_pred EeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhh
Confidence 999999999998853
Q ss_pred ----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC----ccccccc
Q 005177 535 ----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF----PAKIAWT 606 (710)
Q Consensus 535 ----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~----~~~~~~~ 606 (710)
..+|.++.+++.|+++||+|||+. +|+||||||+||+++.++.+|++|||+++......... ......+
T Consensus 171 ~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y 247 (343)
T cd05103 171 LYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 247 (343)
T ss_pred hhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcce
Confidence 135677788999999999999998 99999999999999999999999999987542211110 1111225
Q ss_pred CchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhcC
Q 005177 607 ESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCT 685 (710)
Q Consensus 607 ~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl 685 (710)
.+||......++.++|||||||++|||++ |..|+........ .. ..+........+.. ....+.+++.+||
T Consensus 248 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--~~---~~~~~~~~~~~~~~---~~~~~~~~~~~cl 319 (343)
T cd05103 248 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--FC---RRLKEGTRMRAPDY---TTPEMYQTMLDCW 319 (343)
T ss_pred ECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH--HH---HHHhccCCCCCCCC---CCHHHHHHHHHHc
Confidence 67787777788999999999999999997 7777653221110 00 00000000000111 1235778899999
Q ss_pred CCCCCCCCCHHHHHHHHhccCC
Q 005177 686 RSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 686 ~~~p~~RPs~~evl~~L~~~~~ 707 (710)
+.+|++|||+.|++++|+.+-.
T Consensus 320 ~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 320 HGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred cCChhhCcCHHHHHHHHHHHHh
Confidence 9999999999999999987643
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=307.00 Aligned_cols=233 Identities=16% Similarity=0.135 Sum_probs=181.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCC-CceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHK-NLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~-niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
..+.||+|+||.||+|.. .+++.||||.++... ...+.+..|++++..++|+ +|+++++++.+.+..|+||||+
T Consensus 4 ~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~ 83 (324)
T cd05587 4 FLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYV 83 (324)
T ss_pred EEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCC
Confidence 567899999999999985 567899999998632 2345677888888888765 5888999999999999999999
Q ss_pred CCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--C
Q 005177 524 PNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--F 599 (710)
Q Consensus 524 ~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~ 599 (710)
++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........ .
T Consensus 84 ~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~ 160 (324)
T cd05587 84 NGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRT 160 (324)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCceee
Confidence 99999999865 467888999999999999999998 9999999999999999999999999998643211111 1
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 679 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (710)
..++..|.+||+..+..++.++||||+||++|||+||+.|+.+..... ....+.... ...+. .....+.+
T Consensus 161 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~------~~~~i~~~~-~~~~~---~~~~~~~~ 230 (324)
T cd05587 161 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE------LFQSIMEHN-VSYPK---SLSKEAVS 230 (324)
T ss_pred ecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH------HHHHHHcCC-CCCCC---CCCHHHHH
Confidence 123445778898888888999999999999999999999986432110 011111111 11111 12345678
Q ss_pred HHhhcCCCCCCCCCCH
Q 005177 680 VALLCTRSTPSDRPSM 695 (710)
Q Consensus 680 l~~~Cl~~~p~~RPs~ 695 (710)
++.+|++.||++||+.
T Consensus 231 li~~~l~~~P~~R~~~ 246 (324)
T cd05587 231 ICKGLLTKHPAKRLGC 246 (324)
T ss_pred HHHHHhhcCHHHcCCC
Confidence 8999999999999976
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-34 Score=294.30 Aligned_cols=244 Identities=19% Similarity=0.285 Sum_probs=189.9
Q ss_pred hhhhhcCCCCCccEEEEcC-CC---cEEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVLP-TG---ITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~-~g---~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
..+.+|+|+||.||+|... +| ..||||.++.. ....+.|..|++.+++++||||+++++++.+++..++||||+
T Consensus 8 ~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 87 (269)
T cd05065 8 IEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFM 87 (269)
T ss_pred EEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecC
Confidence 5678999999999999863 33 46999998753 334667899999999999999999999999999999999999
Q ss_pred CCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--
Q 005177 524 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 598 (710)
Q Consensus 524 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~-- 598 (710)
++|+|.+++.. ..++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++........
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 164 (269)
T cd05065 88 ENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT 164 (269)
T ss_pred CCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCccccccccCccccc
Confidence 99999999864 468899999999999999999998 9999999999999999999999999998765322111
Q ss_pred Ccc---c--ccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHH
Q 005177 599 FPA---K--IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 672 (710)
Q Consensus 599 ~~~---~--~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (710)
... + ...+.+||+.....++.++|||||||++|||++ |+.|+....... ......... . ...+ .+
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~---~~~~i~~~~--~-~~~~---~~ 235 (269)
T cd05065 165 YTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD---VINAIEQDY--R-LPPP---MD 235 (269)
T ss_pred cccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH---HHHHHHcCC--c-CCCc---cc
Confidence 000 0 123567888887888999999999999999987 888875332110 000011100 0 1111 12
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 673 EIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
....+.+++.+|++.+|.+||+|++++.+|+.+
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 236 CPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 234567899999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-34 Score=298.77 Aligned_cols=248 Identities=17% Similarity=0.225 Sum_probs=194.8
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
+..+.|. ..+.||+|++|.||++.. .+|..||+|.+..... ..+.+.+|+.+++.++||||+++++++..++..++
T Consensus 16 ~~~~~y~--~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l 93 (297)
T cd06656 16 DPKKKYT--RFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 93 (297)
T ss_pred Chhhhce--eeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEE
Confidence 3345566 778899999999999985 6899999999976432 35667889999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 519 LYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
||||+++++|.+++.. ..++.++..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||++........
T Consensus 94 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~ 170 (297)
T cd06656 94 VMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (297)
T ss_pred eecccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCCcc
Confidence 9999999999999865 568889999999999999999998 999999999999999999999999999875432211
Q ss_pred C--CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHH
Q 005177 598 S--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 675 (710)
Q Consensus 598 ~--~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (710)
. ...+..++.+||......++.++|||||||++|||+||+.|+........... ......+. .........
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~-----~~~~~~~~--~~~~~~~~~ 243 (297)
T cd06656 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-----IATNGTPE--LQNPERLSA 243 (297)
T ss_pred CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee-----eccCCCCC--CCCccccCH
Confidence 1 11234456778888777788999999999999999999999864432211100 00000000 011112234
Q ss_pred HHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 676 LVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 676 ~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
.+.+++.+|++.+|++||++.|+++
T Consensus 244 ~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 244 VFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhc
Confidence 5678889999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-34 Score=292.32 Aligned_cols=240 Identities=19% Similarity=0.241 Sum_probs=187.6
Q ss_pred hhhcCCCCCccEEEEcC--CC--cEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 452 EEAARPQSAAGCKAVLP--TG--ITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~~--~g--~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
+.||+|++|.||+|... .+ ..||||.+..... ..+.+.+|++.+++++|||||++++++.+ ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 36899999999999863 33 3699999987544 46678899999999999999999999988 889999999999
Q ss_pred CChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC---
Q 005177 526 GNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--- 598 (710)
Q Consensus 526 gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--- 598 (710)
|+|.+++.. .++|.....++.|+++||+|||+. +++||||||+||+++.++.+|++|||+++........
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 156 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVM 156 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccccceec
Confidence 999999865 358899999999999999999998 9999999999999999999999999998765432111
Q ss_pred --CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHH
Q 005177 599 --FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 675 (710)
Q Consensus 599 --~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (710)
.......+.+||+.....++.++|||||||++|||+| |+.|+....... .. .. ... .......+ .....
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-~~-~~-~~~--~~~~~~~~---~~~~~ 228 (257)
T cd05040 157 EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ-IL-KK-IDK--EGERLERP---EACPQ 228 (257)
T ss_pred ccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH-HH-HH-HHh--cCCcCCCC---ccCCH
Confidence 1112223678888888889999999999999999999 988875322111 00 00 000 00001101 11234
Q ss_pred HHHHHHhhcCCCCCCCCCCHHHHHHHHh
Q 005177 676 LVLDVALLCTRSTPSDRPSMEEALKLLS 703 (710)
Q Consensus 676 ~~~~l~~~Cl~~~p~~RPs~~evl~~L~ 703 (710)
.+.+++.+|++.+|++||++.|+++.|.
T Consensus 229 ~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 229 DIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred HHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 6778999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=289.71 Aligned_cols=238 Identities=15% Similarity=0.181 Sum_probs=190.3
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.+|+|.||.|-+|.. ..|+.||||.++++.. ..-.+++||++|+.++|||||+++.+|...+.+.|||||..
T Consensus 57 ~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS 136 (668)
T KOG0611|consen 57 ITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYAS 136 (668)
T ss_pred HHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecC
Confidence 778899999999999975 7899999999987543 23457899999999999999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-CCcc
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SFPA 601 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-~~~~ 601 (710)
+|+|+|++.. .++..+..++..||..|+.|+|.. +++|||||-+|||||.++++||+|||++-.+....- ..-+
T Consensus 137 ~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqTFC 213 (668)
T KOG0611|consen 137 GGELYDYISERGSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQTFC 213 (668)
T ss_pred CccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhccccHHHHhc
Confidence 9999999976 567777789999999999999999 999999999999999999999999999877653211 1122
Q ss_pred cccccCchhhhhccCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHH
Q 005177 602 KIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 680 (710)
Q Consensus 602 ~~~~~~~~e~~~~~~~-~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 680 (710)
+.+.|+.||+.++.+| ++.+|.||+||+||-|+.|..||++.... ..+.++-...... ++.+ ....-+
T Consensus 214 GSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk------~lvrQIs~GaYrE-P~~P----SdA~gL 282 (668)
T KOG0611|consen 214 GSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK------RLVRQISRGAYRE-PETP----SDASGL 282 (668)
T ss_pred CCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH------HHHHHhhcccccC-CCCC----chHHHH
Confidence 4566888999887766 66799999999999999999999854321 1122222222111 1111 123345
Q ss_pred HhhcCCCCCCCCCCHHHHHHH
Q 005177 681 ALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 681 ~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+..++..+|++|-|+.||..+
T Consensus 283 IRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 283 IRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred HHHHHhcCcccchhHHHHhhh
Confidence 566777899999999998765
|
|
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=290.15 Aligned_cols=240 Identities=21% Similarity=0.279 Sum_probs=189.8
Q ss_pred hhhcCCCCCccEEEEcCC----CcEEEEEEeeccchh--HHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 452 EEAARPQSAAGCKAVLPT----GITVSVKKIEWGATR--IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~~~----g~~vAvK~l~~~~~~--~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
+.||+|+||.||+|.... +..||||.++..... .+.+.+|++.+.+++|+||+++++++.+.+..++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 368999999999998643 889999999875433 67888999999999999999999999999999999999999
Q ss_pred CChhhhhhc-----------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccc
Q 005177 526 GNLSEKIRT-----------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 594 (710)
Q Consensus 526 gsL~~~l~~-----------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~ 594 (710)
|+|.+++.. ..++..+..++.|+++|++|||+. +|+||||||+||++++++.+|++|||.++....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccccccc
Confidence 999999865 357899999999999999999998 999999999999999999999999999876543
Q ss_pred cC----CCCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcc
Q 005177 595 AD----GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSS 669 (710)
Q Consensus 595 ~~----~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (710)
.. .........+.+||......++.++||||+||++|||++ |..|+....... ....+.+......+
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~------~~~~~~~~~~~~~~-- 229 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE------VLEYLRKGYRLPKP-- 229 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH------HHHHHHcCCCCCCC--
Confidence 21 111112233667888777788999999999999999999 477776432110 01111111101111
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHh
Q 005177 670 LQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 703 (710)
Q Consensus 670 ~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~ 703 (710)
......+.+++.+|++.+|++|||+.|+++.|+
T Consensus 230 -~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 230 -EYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred -ccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 112356778999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-34 Score=296.58 Aligned_cols=242 Identities=22% Similarity=0.278 Sum_probs=188.6
Q ss_pred hhhhhcCCCCCccEEEEcC------CCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVLP------TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~------~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
....+|+|+||.||+|... ++..||+|.+.... ...+.+.+|++++++++||||++++++|..++..++|||
T Consensus 9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 88 (288)
T cd05050 9 YVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFE 88 (288)
T ss_pred ecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEe
Confidence 6788999999999999852 57899999987543 235678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhc------------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC
Q 005177 522 YLPNGNLSEKIRT------------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 577 (710)
Q Consensus 522 y~~~gsL~~~l~~------------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~ 577 (710)
|+++|+|.+++.. .+++.+++.++.|++.||+|||+. +++||||||+||++++
T Consensus 89 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~nil~~~ 165 (288)
T cd05050 89 YMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRNCLVGE 165 (288)
T ss_pred cCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHhheEecC
Confidence 9999999999863 246778899999999999999998 9999999999999999
Q ss_pred CCceEEcccCccccccccCC-----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccc
Q 005177 578 NMEPHLAEFGFKYLTQLADG-----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPI 651 (710)
Q Consensus 578 ~~~~kl~DfGla~~~~~~~~-----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~ 651 (710)
++.+||+|||+++....... ....... +.+||......++.++|||||||++|||++ |..|+.+... ..
T Consensus 166 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~-~~--- 240 (288)
T cd05050 166 NMVVKIADFGLSRNIYSADYYKASENDAIPIR-WMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH-EE--- 240 (288)
T ss_pred CCceEECccccceecccCccccccCCCccChh-hcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-HH---
Confidence 99999999999875432111 0111222 567788777788999999999999999998 7677653221 11
Q ss_pred cccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhc
Q 005177 652 DGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 704 (710)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~ 704 (710)
....+.+......+. .....+.+++.+|++.+|++|||+.|+++.|++
T Consensus 241 --~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 241 --VIYYVRDGNVLSCPD---NCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred --HHHHHhcCCCCCCCC---CCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 111111111011011 123567789999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=300.58 Aligned_cols=243 Identities=15% Similarity=0.103 Sum_probs=190.2
Q ss_pred hcCCchhhhhhcCCCCCccEEEE-cCCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~-~~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
++|. ....||+|+||.||.++ ..+|..+|+|+++++. .+.+-...|-.+|...++|.||+|+-.|++.+.+||
T Consensus 141 ~DFe--~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 141 DDFE--LLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred ccch--hheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 4577 88999999999999997 4789999999999753 245667889999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccc--
Q 005177 519 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL-- 594 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~-- 594 (710)
||||+||||+..+|.. .++......++.+++.|++-+|+. ++|||||||+|+|||..|++|++|||++.....
T Consensus 219 iMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~ 295 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKH 295 (550)
T ss_pred EEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchhhhhh
Confidence 9999999999999976 556666778888999999999999 999999999999999999999999999742100
Q ss_pred -------------c-----CCCC-----------------------------cccccccCchhhhhccCCccccceeeHH
Q 005177 595 -------------A-----DGSF-----------------------------PAKIAWTESGEFYNAMKEEMYMDVYGFG 627 (710)
Q Consensus 595 -------------~-----~~~~-----------------------------~~~~~~~~~~e~~~~~~~~~~~DVySfG 627 (710)
. .... ..+++-|.+||++.+..++..+|.||+|
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG 375 (550)
T KOG0605|consen 296 RIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLG 375 (550)
T ss_pred hhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHH
Confidence 0 0000 1124446678999988999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCccccc-ccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCC---HHHHH
Q 005177 628 EIILEILTNGRLTNAGSSLQNKPID-GLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPS---MEEAL 699 (710)
Q Consensus 628 vvl~Elltg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs---~~evl 699 (710)
||+|||+.|-+||.++.....|... .+.....-|. ......++.+++.+|+. ||++|-- ++||-
T Consensus 376 ~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~-------~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK 443 (550)
T KOG0605|consen 376 CIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPE-------EVDLSDEAKDLITRLLC-DPENRLGSKGAEEIK 443 (550)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCC-------cCcccHHHHHHHHHHhc-CHHHhcCcccHHHHh
Confidence 9999999999999866544333221 1111111111 11223567788889988 9999965 55553
|
|
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-34 Score=296.36 Aligned_cols=249 Identities=18% Similarity=0.184 Sum_probs=192.0
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.||+|+||.||++.. .+|+.||+|.+.... ...+.+.+|++++.+++||||+++++++...+..++||||+++|
T Consensus 9 ~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 88 (284)
T cd06620 9 TISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCG 88 (284)
T ss_pred HHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCC
Confidence 778999999999999985 578999999887542 23567889999999999999999999999999999999999999
Q ss_pred Chhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCccccc
Q 005177 527 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIA 604 (710)
Q Consensus 527 sL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 604 (710)
+|.+++.. ..++.....++.+++.|+.|||+.. +|+||||||+||+++.++.++|+|||++............+..
T Consensus 89 ~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~~~~~~ 166 (284)
T cd06620 89 SLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVGTS 166 (284)
T ss_pred CHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhhccCccccCc
Confidence 99998865 4688899999999999999999732 7999999999999999999999999987654222111122233
Q ss_pred ccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc--cc---cccccccccccccCCCcchHHHHHHHHH
Q 005177 605 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK--PI---DGLLGEMYNENEVGSSSSLQDEIKLVLD 679 (710)
Q Consensus 605 ~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (710)
.+.+||......++.++|||||||++|||+||+.|+......... .. ......+....... . ...+....+.+
T Consensus 167 ~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~ 244 (284)
T cd06620 167 TYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPR-L-PSSDFPEDLRD 244 (284)
T ss_pred ccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCC-C-CchhcCHHHHH
Confidence 466788877778889999999999999999999998743221000 00 01111121111011 0 01113346778
Q ss_pred HHhhcCCCCCCCCCCHHHHHHHH
Q 005177 680 VALLCTRSTPSDRPSMEEALKLL 702 (710)
Q Consensus 680 l~~~Cl~~~p~~RPs~~evl~~L 702 (710)
++.+|++.||++|||+.|++++.
T Consensus 245 li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 245 FVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred HHHHHhcCCcccCcCHHHHhcCc
Confidence 99999999999999999999874
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-34 Score=300.77 Aligned_cols=245 Identities=21% Similarity=0.263 Sum_probs=188.6
Q ss_pred hhhhhcCCCCCccEEEEc--------CCCcEEEEEEeecc--chhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeE
Q 005177 450 ECEEAARPQSAAGCKAVL--------PTGITVSVKKIEWG--ATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~--------~~g~~vAvK~l~~~--~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 518 (710)
....+|+|+||.||+|.. .++..||+|.++.. ....+.+.+|+..++.+ +||||+++++++...+..++
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 98 (304)
T cd05101 19 LGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 98 (304)
T ss_pred ecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEE
Confidence 668899999999999963 23568999998753 23356788999999999 89999999999999999999
Q ss_pred EEeecCCCChhhhhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc
Q 005177 519 LYDYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~ 580 (710)
||||+++|+|.+++.. .++|.++..++.|+++||+|||+. +|+||||||+||++++++.
T Consensus 99 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nili~~~~~ 175 (304)
T cd05101 99 IVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNVLVTENNV 175 (304)
T ss_pred EEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceEEEcCCCc
Confidence 9999999999999864 246788899999999999999998 9999999999999999999
Q ss_pred eEEcccCccccccccCCCC----cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccc
Q 005177 581 PHLAEFGFKYLTQLADGSF----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLL 655 (710)
Q Consensus 581 ~kl~DfGla~~~~~~~~~~----~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~ 655 (710)
+||+|||+++......... ......+.+||......++.++|||||||++|||+| |+.|+.... ... ..
T Consensus 176 ~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-~~~-----~~ 249 (304)
T cd05101 176 MKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEE-----LF 249 (304)
T ss_pred EEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC-HHH-----HH
Confidence 9999999987653221111 111123567787777778999999999999999999 566654221 111 11
Q ss_pred cccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 656 GEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
..+........+ ......+.+++.+||+.+|++||+|.|+++.|+++.
T Consensus 250 ~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~ 297 (304)
T cd05101 250 KLLKEGHRMDKP---ANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRIL 297 (304)
T ss_pred HHHHcCCcCCCC---CCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHH
Confidence 111111100001 122345778899999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-34 Score=293.78 Aligned_cols=243 Identities=16% Similarity=0.203 Sum_probs=188.7
Q ss_pred hhhhhcCCCCCccEEEEcC------CCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVLP------TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~------~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
..+.+|+|+||.||+|... ++..||+|.+.... .....+.+|++++++++||||+++++++...+..++|||
T Consensus 10 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 89 (277)
T cd05032 10 LIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVME 89 (277)
T ss_pred EEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEe
Confidence 6688999999999999753 34789999987543 235568889999999999999999999999999999999
Q ss_pred ecCCCChhhhhhc------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcc
Q 005177 522 YLPNGNLSEKIRT------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK 589 (710)
Q Consensus 522 y~~~gsL~~~l~~------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla 589 (710)
|+++|+|.+++.. ..+|....+++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 90 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl~dfg~~ 166 (277)
T cd05032 90 LMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIGDFGMT 166 (277)
T ss_pred cCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEECCcccc
Confidence 9999999999864 246788999999999999999998 9999999999999999999999999998
Q ss_pred ccccccCC----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccccccccc
Q 005177 590 YLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEV 664 (710)
Q Consensus 590 ~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (710)
+....... ........+.+||......++.++|||||||++||++| |+.|+.+..... ......+....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~------~~~~~~~~~~~ 240 (277)
T cd05032 167 RDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE------VLKFVIDGGHL 240 (277)
T ss_pred hhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH------HHHHHhcCCCC
Confidence 75432211 11111223667788777778999999999999999999 777775322111 00111111101
Q ss_pred CCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhc
Q 005177 665 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 704 (710)
Q Consensus 665 ~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~ 704 (710)
..+.. ....+.+++.+|++.+|++|||+.|+++.|++
T Consensus 241 ~~~~~---~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 241 DLPEN---CPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred CCCCC---CCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 11111 23567789999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=291.89 Aligned_cols=240 Identities=18% Similarity=0.227 Sum_probs=191.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.+|.|+||.||+|.. .++..||+|.+.... ...+.+.+|++++++++||||+++++++.+++..++||||+++|
T Consensus 8 ~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 87 (277)
T cd06640 8 KLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGG 87 (277)
T ss_pred hhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCC
Confidence 678899999999999986 568999999987532 34567888999999999999999999999999999999999999
Q ss_pred Chhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Ccccc
Q 005177 527 NLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAKI 603 (710)
Q Consensus 527 sL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~~~ 603 (710)
+|.+++.. ..++.+...++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++......... .....
T Consensus 88 ~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 164 (277)
T cd06640 88 SALDLLRAGPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGT 164 (277)
T ss_pred cHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccccCc
Confidence 99999875 557788889999999999999998 9999999999999999999999999998765322111 11233
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 683 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 683 (710)
.++.+||+..+...+.++|||||||++|||+||+.|+.+...... .... ... ..+.........+.+++.+
T Consensus 165 ~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~------~~~~-~~~--~~~~~~~~~~~~~~~li~~ 235 (277)
T cd06640 165 PFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV------LFLI-PKN--NPPTLTGEFSKPFKEFIDA 235 (277)
T ss_pred ccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH------hhhh-hcC--CCCCCchhhhHHHHHHHHH
Confidence 456788888777889999999999999999999998864321110 0000 000 0011122344567789999
Q ss_pred cCCCCCCCCCCHHHHHHH
Q 005177 684 CTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 684 Cl~~~p~~RPs~~evl~~ 701 (710)
||+.+|++||++.|+++.
T Consensus 236 ~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 236 CLNKDPSFRPTAKELLKH 253 (277)
T ss_pred HcccCcccCcCHHHHHhC
Confidence 999999999999999765
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-34 Score=292.99 Aligned_cols=242 Identities=17% Similarity=0.173 Sum_probs=184.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
....+|+|+||.||+|.. .++..||+|.+..... ..+.+.+|++++++++||||+++++++..++..++||||+++++
T Consensus 12 ~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 91 (268)
T cd06624 12 ERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGS 91 (268)
T ss_pred ceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCC
Confidence 557899999999999985 5688999999876433 45678899999999999999999999999999999999999999
Q ss_pred hhhhhhc---CC--CHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC-CCceEEcccCccccccccCCC--C
Q 005177 528 LSEKIRT---KR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-NMEPHLAEFGFKYLTQLADGS--F 599 (710)
Q Consensus 528 L~~~l~~---~~--~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~-~~~~kl~DfGla~~~~~~~~~--~ 599 (710)
|.++++. .. ++.....++.|+++|++|||+. +|+||||||+||+++. ++.+||+|||++......... .
T Consensus 92 L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~ 168 (268)
T cd06624 92 LSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTET 168 (268)
T ss_pred HHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCcccc
Confidence 9999975 23 6777889999999999999998 9999999999999986 679999999998754321111 1
Q ss_pred cccccccCchhhhhcc--CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAM--KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~--~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
..+...+.+||+.... .++.++|||||||++|||++|+.|+............. ...... +.........+
T Consensus 169 ~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~ 241 (268)
T cd06624 169 FTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKV---GMFKIH----PEIPESLSAEA 241 (268)
T ss_pred CCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhh---hhhccC----CCCCcccCHHH
Confidence 1123335677876543 36788999999999999999999986432111000000 000000 00111223457
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 678 LDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+++.+||+.+|++|||+.|+++.
T Consensus 242 ~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 242 KNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred HHHHHHHcCCCchhCCCHHHHHhC
Confidence 788999999999999999999763
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=287.74 Aligned_cols=240 Identities=19% Similarity=0.234 Sum_probs=187.6
Q ss_pred hhcCCCCCccEEEEcCCCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChhh
Q 005177 453 EAARPQSAAGCKAVLPTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSE 530 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~~ 530 (710)
.+|+|++|.||++...+|+.||+|.++.... ..+.+.+|++++++++||||+++++++.+.+..++||||+++++|.+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~ 81 (251)
T cd05041 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLT 81 (251)
T ss_pred ccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHH
Confidence 6899999999999987799999999876432 35678899999999999999999999999999999999999999999
Q ss_pred hhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC----Ccccc
Q 005177 531 KIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS----FPAKI 603 (710)
Q Consensus 531 ~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~----~~~~~ 603 (710)
++.. ..++.....++.+++.|++|||+. +++||||||+||+++.++.+||+|||+++........ .....
T Consensus 82 ~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~ 158 (251)
T cd05041 82 FLRKKKNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIP 158 (251)
T ss_pred HHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcce
Confidence 9854 457888899999999999999998 9999999999999999999999999998754311110 01111
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
..|.+||......++.++|||||||++|||+| |..|+...... . ....... ......+ ......+.+++.
T Consensus 159 ~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~-~--~~~~~~~---~~~~~~~---~~~~~~~~~li~ 229 (251)
T cd05041 159 IKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ-Q--TRERIES---GYRMPAP---QLCPEEIYRLML 229 (251)
T ss_pred eccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH-H--HHHHHhc---CCCCCCC---ccCCHHHHHHHH
Confidence 22667888777788999999999999999999 66666432211 0 0000000 0001101 122346778999
Q ss_pred hcCCCCCCCCCCHHHHHHHHhc
Q 005177 683 LCTRSTPSDRPSMEEALKLLSG 704 (710)
Q Consensus 683 ~Cl~~~p~~RPs~~evl~~L~~ 704 (710)
+|+..+|++|||+.|+++.|+.
T Consensus 230 ~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 230 QCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred HHhccChhhCcCHHHHHHHhhC
Confidence 9999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-34 Score=307.10 Aligned_cols=254 Identities=20% Similarity=0.224 Sum_probs=191.1
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcC----
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR---- 513 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~---- 513 (710)
+.+.|. ..+.||+|+||.||++.. ..++.||||++... ....+.+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~ 99 (364)
T cd07875 22 VLKRYQ--NLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE 99 (364)
T ss_pred hhccee--EEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccc
Confidence 445566 778999999999999985 57889999999753 23356678899999999999999999988653
Q ss_pred --CceeEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 514 --HQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 514 --~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
...|+||||++ +++.+.+....++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 100 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 175 (364)
T cd07875 100 EFQDVYIVMELMD-ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART 175 (364)
T ss_pred ccCeEEEEEeCCC-CCHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCCccc
Confidence 35799999997 478888877788999999999999999999998 999999999999999999999999999976
Q ss_pred ccccCCC-CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc------------c----c
Q 005177 592 TQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID------------G----L 654 (710)
Q Consensus 592 ~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~------------~----~ 654 (710)
....... ...+...|++||+..+..++.++|||||||++|||+||+.||.+......+... . .
T Consensus 176 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (364)
T cd07875 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT 255 (364)
T ss_pred cCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHH
Confidence 5322111 112344578889888888899999999999999999999998743321110000 0 0
Q ss_pred ccccccccc--------------c-C-CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 655 LGEMYNENE--------------V-G-SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 655 ~~~~~~~~~--------------~-~-~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
........+ . . ...........+.+++.+|++.||++|||+.|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000000 0 0 000001112467899999999999999999999874
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-34 Score=300.82 Aligned_cols=245 Identities=21% Similarity=0.254 Sum_probs=188.0
Q ss_pred hhhhhcCCCCCccEEEEc--------CCCcEEEEEEeeccc--hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeE
Q 005177 450 ECEEAARPQSAAGCKAVL--------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~--------~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 518 (710)
..+.||+|+||.||++.. .++..+|+|.++... .....+.+|++++.++ +||||++++++|...+..++
T Consensus 22 i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~l 101 (307)
T cd05098 22 LGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV 101 (307)
T ss_pred EeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence 668899999999999874 134579999998542 2345678899999999 79999999999999999999
Q ss_pred EEeecCCCChhhhhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc
Q 005177 519 LYDYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~ 580 (710)
||||+++|+|.+++.. .++|.++.+++.|++.||+|||+. +++||||||+||+++.++.
T Consensus 102 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~~~~~ 178 (307)
T cd05098 102 IVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNV 178 (307)
T ss_pred EEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheEEcCCCc
Confidence 9999999999999964 267889999999999999999998 9999999999999999999
Q ss_pred eEEcccCccccccccCC--CCcc--cccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccc
Q 005177 581 PHLAEFGFKYLTQLADG--SFPA--KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLL 655 (710)
Q Consensus 581 ~kl~DfGla~~~~~~~~--~~~~--~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~ 655 (710)
+|++|||+++....... .... ....+.+||......++.++|||||||++|||++ |+.|+... .... ..
T Consensus 179 ~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~-~~~~-----~~ 252 (307)
T cd05098 179 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEE-----LF 252 (307)
T ss_pred EEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcC-CHHH-----HH
Confidence 99999999875432110 0111 1123567787777778899999999999999999 66666422 1111 00
Q ss_pred cccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 656 GEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
.. ....... .........+.+++.+|++.+|++||+|.||++.|+++.
T Consensus 253 ~~-~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~ 300 (307)
T cd05098 253 KL-LKEGHRM--DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 300 (307)
T ss_pred HH-HHcCCCC--CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 00 0001000 001122346678899999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-34 Score=294.24 Aligned_cols=240 Identities=21% Similarity=0.257 Sum_probs=185.6
Q ss_pred hhcCCCCCccEEEEcCC-------CcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeec
Q 005177 453 EAARPQSAAGCKAVLPT-------GITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~~~-------g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
.+|+|+||.||+|...+ +..+|||.+.... .....+.+|++++++++||||++++++|...+..++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 58999999999998532 3579999987543 34667889999999999999999999999999999999999
Q ss_pred CCCChhhhhhc---------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC-----ceEEcccCcc
Q 005177 524 PNGNLSEKIRT---------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM-----EPHLAEFGFK 589 (710)
Q Consensus 524 ~~gsL~~~l~~---------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~-----~~kl~DfGla 589 (710)
++|+|.+++.. ..+|.++..++.|++.|++|||+. +++|+||||+||+++.+. .+|++|||++
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 99999999864 257888999999999999999988 999999999999999877 8999999998
Q ss_pred ccccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccccccccc
Q 005177 590 YLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEV 664 (710)
Q Consensus 590 ~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (710)
+........ .......+.+||+.....++.++|||||||++|||+| |+.|+........ ...+......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~------~~~~~~~~~~ 232 (269)
T cd05044 159 RDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEV------LQHVTAGGRL 232 (269)
T ss_pred cccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHH------HHHHhcCCcc
Confidence 754221110 0111223667888877788999999999999999998 8888763322110 0000000001
Q ss_pred CCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhc
Q 005177 665 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 704 (710)
Q Consensus 665 ~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~ 704 (710)
..+ ......+.+++.+||..+|++||++.++.+.|++
T Consensus 233 ~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 233 QKP---ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred CCc---ccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 111 1223456789999999999999999999999863
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=312.85 Aligned_cols=241 Identities=14% Similarity=0.115 Sum_probs=182.6
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||++.. .+|+.||||.+.... ...+.+.+|++++.+++||||+++++++.+++..++||||++
T Consensus 5 ~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~ 84 (376)
T cd05598 5 KIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 84 (376)
T ss_pred EEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCC
Confidence 678899999999999985 678999999997532 234567889999999999999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC------
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD------ 596 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~------ 596 (710)
+|+|.+++.. ..+......++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.......
T Consensus 85 ~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~ 161 (376)
T cd05598 85 GGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ 161 (376)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccc
Confidence 9999999975 356777788999999999999998 99999999999999999999999999974221000
Q ss_pred ---------------------------------------CCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCC
Q 005177 597 ---------------------------------------GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNG 637 (710)
Q Consensus 597 ---------------------------------------~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~ 637 (710)
.....++..|.+||+.....++.++|||||||++|||+||+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~ 241 (376)
T cd05598 162 KGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQ 241 (376)
T ss_pred cccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCC
Confidence 00011344577889888888899999999999999999999
Q ss_pred CCCCCCCCCCcccc-cccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCC---CHHHHHHH
Q 005177 638 RLTNAGSSLQNKPI-DGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRP---SMEEALKL 701 (710)
Q Consensus 638 ~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RP---s~~evl~~ 701 (710)
.||.+......... ..+..... .... ......+.+++.+|+ .+|++|+ ++.|++++
T Consensus 242 ~Pf~~~~~~~~~~~i~~~~~~~~----~~~~---~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 242 PPFLADTPAETQLKVINWETTLH----IPSQ---AKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred CCCCCCCHHHHHHHHhccCcccc----CCCC---CCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 99975432111000 00000000 0000 111234455666655 4999999 88888764
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-34 Score=291.96 Aligned_cols=244 Identities=16% Similarity=0.194 Sum_probs=190.6
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch------hHHHHHHHHHHHhccCCCCceeEEEEEEcCCcee
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT------RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~------~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 517 (710)
.|. ..+.+|+|++|.||++.. .+|..||+|.+..... ..+.+.+|++++++++||||+++++++.+++..+
T Consensus 3 ~~~--~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 80 (263)
T cd06625 3 NWR--RGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLS 80 (263)
T ss_pred ccc--ccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEE
Confidence 355 778999999999999985 5789999999875321 2456888999999999999999999999999999
Q ss_pred EEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 518 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
+||||+++++|.+++.. ..++....+++.|++.|++|||+. +|+||||||+||++++++.++|+|||+++.....
T Consensus 81 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~ 157 (263)
T cd06625 81 IFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTI 157 (263)
T ss_pred EEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecccc
Confidence 99999999999999865 457788899999999999999998 9999999999999999999999999998754321
Q ss_pred CC-----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcch
Q 005177 596 DG-----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 670 (710)
Q Consensus 596 ~~-----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (710)
.. ....+..++.+||...+..++.++||||+||++|||++|+.|+........ . .+....... ....
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~-----~~~~~~~~~--~~~~ 229 (263)
T cd06625 158 CSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA-I-----FKIATQPTN--PQLP 229 (263)
T ss_pred ccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHH-H-----HHHhccCCC--CCCC
Confidence 11 111133457788888777789999999999999999999999864322110 0 000000000 0011
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 671 QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 671 ~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
......+.+++.+||..+|++|||+.|++++
T Consensus 230 ~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 230 SHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 1123456788899999999999999999864
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-34 Score=307.91 Aligned_cols=247 Identities=15% Similarity=0.089 Sum_probs=186.3
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
+.|. ..+.||+|+||.||++.. .+++.||+|.+.... ...+.+.+|+++++.++||||+++++++.+++..++
T Consensus 43 ~~y~--i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (371)
T cd05622 43 EDYE--VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYM 120 (371)
T ss_pred hhcE--EEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence 4466 778999999999999986 578899999997522 234567889999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 519 LYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
||||+++|+|.+++.. ..+......++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 121 v~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~ 197 (371)
T cd05622 121 VMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 197 (371)
T ss_pred EEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCc
Confidence 9999999999999875 457777888999999999999998 999999999999999999999999999876532211
Q ss_pred ---CCcccccccCchhhhhcc----CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcch
Q 005177 598 ---SFPAKIAWTESGEFYNAM----KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 670 (710)
Q Consensus 598 ---~~~~~~~~~~~~e~~~~~----~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (710)
....++..|.+||+.... .++.++|||||||++|||++|+.||........ ...+.........+..
T Consensus 198 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~------~~~i~~~~~~~~~~~~ 271 (371)
T cd05622 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT------YSKIMNHKNSLTFPDD 271 (371)
T ss_pred ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHH------HHHHHcCCCcccCCCc
Confidence 112244557788877543 267899999999999999999999874332110 1111111000001111
Q ss_pred HHHHHHHHHHHhhcCCCCCCC--CCCHHHHHHH
Q 005177 671 QDEIKLVLDVALLCTRSTPSD--RPSMEEALKL 701 (710)
Q Consensus 671 ~~~~~~~~~l~~~Cl~~~p~~--RPs~~evl~~ 701 (710)
......+.+++.+|+..++.+ ||++.|+.++
T Consensus 272 ~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 272 NDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred CCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 122345667888898744433 7899998875
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=288.41 Aligned_cols=239 Identities=22% Similarity=0.261 Sum_probs=185.6
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.+|+|+||.||++.. +++.||+|.++... ..+.+.+|+.++++++||||+++++++..+ ..++||||+++|+|.
T Consensus 10 ~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~~~L~ 86 (254)
T cd05083 10 LGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV-TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSKGNLV 86 (254)
T ss_pred eeeeeccCCCCceEeccc-CCCceEEEeecCcc-hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCCCCHH
Confidence 678899999999999974 78889999997543 345688899999999999999999998764 579999999999999
Q ss_pred hhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCcccccc
Q 005177 530 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAW 605 (710)
Q Consensus 530 ~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 605 (710)
+++.. ..++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++............ ..
T Consensus 87 ~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~-~~ 162 (254)
T cd05083 87 NFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLP-VK 162 (254)
T ss_pred HHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCC-ce
Confidence 99864 357888999999999999999998 99999999999999999999999999987543221111112 23
Q ss_pred cCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhc
Q 005177 606 TESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 684 (710)
Q Consensus 606 ~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 684 (710)
|.+||+.....++.++|||||||++|||++ |+.|+..... ... . +........ .........+.+++.+|
T Consensus 163 y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-~~~-~-----~~~~~~~~~--~~~~~~~~~~~~li~~~ 233 (254)
T cd05083 163 WTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL-KEV-K-----ECVEKGYRM--EPPEGCPADVYVLMTSC 233 (254)
T ss_pred ecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH-HHH-H-----HHHhCCCCC--CCCCcCCHHHHHHHHHH
Confidence 667788777788899999999999999998 7777653321 110 0 000000000 00112234567899999
Q ss_pred CCCCCCCCCCHHHHHHHHhc
Q 005177 685 TRSTPSDRPSMEEALKLLSG 704 (710)
Q Consensus 685 l~~~p~~RPs~~evl~~L~~ 704 (710)
++.+|++||++.++++.|++
T Consensus 234 l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 234 WETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred cCCChhhCcCHHHHHHHHcc
Confidence 99999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-34 Score=319.23 Aligned_cols=244 Identities=15% Similarity=0.178 Sum_probs=189.1
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcCC-----
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----- 514 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----- 514 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||.+... ......+.+|+..+..++|+||+++++.+...+
T Consensus 32 ~rY~--i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 32 KKYW--ISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred CCEE--EEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 4455 778999999999999984 68999999999753 223556788999999999999999988775432
Q ss_pred ---ceeEEEeecCCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcc
Q 005177 515 ---QAYLLYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 585 (710)
Q Consensus 515 ---~~~lv~Ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~D 585 (710)
..++||||+++|+|.++++. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~D 186 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLGD 186 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEEe
Confidence 36899999999999999864 356777889999999999999998 999999999999999999999999
Q ss_pred cCccccccccC----CCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccc
Q 005177 586 FGFKYLTQLAD----GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNE 661 (710)
Q Consensus 586 fGla~~~~~~~----~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 661 (710)
||+++...... .....+...|.+||+.....++.++|||||||++|||++|+.||..... .. ........
T Consensus 187 FGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~-~~-----~~~~~~~~ 260 (496)
T PTZ00283 187 FGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM-EE-----VMHKTLAG 260 (496)
T ss_pred cccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH-HH-----HHHHHhcC
Confidence 99987653211 1112244557888988888899999999999999999999999864321 11 01111111
Q ss_pred cccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 662 NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.....+. .....+.+++.+||+.||++||++.+++++
T Consensus 261 ~~~~~~~---~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 261 RYDPLPP---SISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CCCCCCC---CCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 1000111 123457788999999999999999998764
|
|
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=293.39 Aligned_cols=242 Identities=17% Similarity=0.176 Sum_probs=185.6
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
..+.+|+|+||.||+|.. .++..+|+|.+.... ...+.+.+|++++++++||||++++++|..++..++||||+++|+
T Consensus 9 i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~ 88 (282)
T cd06643 9 IIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGA 88 (282)
T ss_pred HHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCc
Confidence 567799999999999986 568899999997643 345678889999999999999999999999999999999999999
Q ss_pred hhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--CCccc
Q 005177 528 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAK 602 (710)
Q Consensus 528 L~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--~~~~~ 602 (710)
|..++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+|++|||+++....... ....+
T Consensus 89 l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 165 (282)
T cd06643 89 VDAVMLELERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIG 165 (282)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccccccccccccccc
Confidence 9988753 468999999999999999999998 999999999999999999999999999865422111 11113
Q ss_pred ccccCchhhhh-----ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 603 IAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 603 ~~~~~~~e~~~-----~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
...|.+||+.. ...++.++|||||||++|||++|+.|+........ .. .. .....+. ...+. .....+
T Consensus 166 ~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-~~-~~-~~~~~~~-~~~~~---~~~~~~ 238 (282)
T cd06643 166 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV-LL-KI-AKSEPPT-LAQPS---RWSSEF 238 (282)
T ss_pred cccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH-HH-HH-hhcCCCC-CCCcc---ccCHHH
Confidence 33466777653 34567789999999999999999998764321110 00 00 0000000 11011 122456
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 678 LDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+++.+||+.+|++||++.+++++
T Consensus 239 ~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 239 KDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred HHHHHHHccCChhhCcCHHHHhcC
Confidence 788999999999999999999864
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-34 Score=297.09 Aligned_cols=242 Identities=14% Similarity=0.118 Sum_probs=186.6
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|.. .+|+.||+|.++.... ..+.+.+|++++.+++|+||+++.+++..++..++||||++
T Consensus 4 ~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 83 (285)
T cd05632 4 QYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMN 83 (285)
T ss_pred EEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEecc
Confidence 557799999999999985 6799999999975422 23456789999999999999999999999999999999999
Q ss_pred CCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC-C
Q 005177 525 NGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-F 599 (710)
Q Consensus 525 ~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~-~ 599 (710)
+|+|.+++.. .+++.....++.|+++||+|||+. +|+||||||+||++++++.+||+|||++......... .
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05632 84 GGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRG 160 (285)
T ss_pred CccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccC
Confidence 9999988854 468999999999999999999998 9999999999999999999999999998654322111 1
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 679 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (710)
..+...+.+||+..+..++.++|||||||++|||+||+.|+........ ............ .... .+....+.+
T Consensus 161 ~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~--~~~~~~~~~~~~-~~~~---~~~~~~~~~ 234 (285)
T cd05632 161 RVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK--REEVDRRVLETE-EVYS---AKFSEEAKS 234 (285)
T ss_pred CCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhhhccc-cccC---ccCCHHHHH
Confidence 1233446788888777889999999999999999999999874332110 000001111111 0001 112235668
Q ss_pred HHhhcCCCCCCCCCC-----HHHHHH
Q 005177 680 VALLCTRSTPSDRPS-----MEEALK 700 (710)
Q Consensus 680 l~~~Cl~~~p~~RPs-----~~evl~ 700 (710)
++..|++.||++||+ +.|++.
T Consensus 235 li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 235 ICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred HHHHHccCCHhHcCCCcccChHHHHc
Confidence 888999999999999 566665
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-34 Score=301.02 Aligned_cols=248 Identities=19% Similarity=0.214 Sum_probs=184.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.+|+|+||.||+|.. .+++.||+|.++.... ....+.+|++++++++||||+++++++..++..++||||+++
T Consensus 10 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~- 88 (309)
T cd07872 10 KLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDK- 88 (309)
T ss_pred EEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCCC-
Confidence 678899999999999985 5788999999975422 244577899999999999999999999999999999999985
Q ss_pred Chhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Ccc
Q 005177 527 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPA 601 (710)
Q Consensus 527 sL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~ 601 (710)
+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ ...
T Consensus 89 ~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 165 (309)
T cd07872 89 DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEV 165 (309)
T ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCCcccccccc
Confidence 88888754 357888889999999999999998 9999999999999999999999999998754322111 112
Q ss_pred cccccCchhhhh-ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc---------------ccccccccccccccccC
Q 005177 602 KIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPIDGLLGEMYNENEVG 665 (710)
Q Consensus 602 ~~~~~~~~e~~~-~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~---------------~~~~~~~~~~~~~~~~~ 665 (710)
....+.+||... ...++.++|||||||++|||+||+.||.+...... |.......+..+.....
T Consensus 166 ~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (309)
T cd07872 166 VTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPK 245 (309)
T ss_pred ccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCc
Confidence 334466777654 34678899999999999999999999864322100 00000000000000000
Q ss_pred C-C----cchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 666 S-S----SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 666 ~-~----~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
. . ...........+++.+|++.||++|||+.|++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 246 YKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred cCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 0 0 0001123456789999999999999999999873
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=291.22 Aligned_cols=244 Identities=15% Similarity=0.183 Sum_probs=186.9
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
..+.||+|+||.||+|.. .+++.||+|.++.... ....+.+|+.+++.++||||+++++++..++..++||||+++|+
T Consensus 13 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~ 92 (267)
T cd06645 13 LIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGS 92 (267)
T ss_pred HHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCc
Confidence 778999999999999985 6789999999876432 34567889999999999999999999999999999999999999
Q ss_pred hhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--CCcccc
Q 005177 528 LSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAKI 603 (710)
Q Consensus 528 L~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--~~~~~~ 603 (710)
|.+++.. ..++.+...++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++........ ....+.
T Consensus 93 L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 169 (267)
T cd06645 93 LQDIYHVTGPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIGT 169 (267)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccccCc
Confidence 9999864 568888999999999999999998 999999999999999999999999999865432111 111233
Q ss_pred cccCchhhhh---ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHH
Q 005177 604 AWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 680 (710)
Q Consensus 604 ~~~~~~e~~~---~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 680 (710)
..+.+||... ...++.++||||+||++|||++|+.|+........... .......+....... .....+.++
T Consensus 170 ~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~l 244 (267)
T cd06645 170 PYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFL--MTKSNFQPPKLKDKM---KWSNSFHHF 244 (267)
T ss_pred ccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHh--hhccCCCCCcccccC---CCCHHHHHH
Confidence 4467788753 34578899999999999999999998864322111000 000000111000000 112346788
Q ss_pred HhhcCCCCCCCCCCHHHHHHH
Q 005177 681 ALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 681 ~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+.+|++.+|++||++++++++
T Consensus 245 i~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 245 VKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred HHHHccCCchhCcCHHHHhcC
Confidence 999999999999999998753
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=310.59 Aligned_cols=247 Identities=18% Similarity=0.201 Sum_probs=185.7
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcCC-----ceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH-----QAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-----~~~lv~ 520 (710)
..+.||+|+||.||++.. .+|+.||||++... ....+.+.+|+++++.++||||+++++++..++ ..|+||
T Consensus 4 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 83 (372)
T cd07853 4 PDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVT 83 (372)
T ss_pred ccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEe
Confidence 678899999999999985 67999999998643 223566888999999999999999999998776 789999
Q ss_pred eecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC
Q 005177 521 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 598 (710)
Q Consensus 521 Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 598 (710)
||+. ++|.+.+.. .+++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 84 e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~ 159 (372)
T cd07853 84 ELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESK 159 (372)
T ss_pred eccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceeecccCccc
Confidence 9997 588887754 468888999999999999999998 9999999999999999999999999998764322111
Q ss_pred C---cccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc-cc---------------cccc
Q 005177 599 F---PAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GL---------------LGEM 658 (710)
Q Consensus 599 ~---~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~-~~---------------~~~~ 658 (710)
. .....+|.+||...+ ..++.++|||||||++|||++|+.||.+.......... .. ....
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 239 (372)
T cd07853 160 HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAH 239 (372)
T ss_pred cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHH
Confidence 1 112345777887665 34788999999999999999999998744321100000 00 0000
Q ss_pred ccccccCCCcch-------HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 659 YNENEVGSSSSL-------QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 659 ~~~~~~~~~~~~-------~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
....... .+.. .+....+.+++.+|++.||++|||+.|++++
T Consensus 240 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 240 ILRGPHK-PPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHhCCCC-CCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 0000000 0000 1113467789999999999999999999874
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-34 Score=299.06 Aligned_cols=242 Identities=17% Similarity=0.232 Sum_probs=190.8
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
..+.+|+|++|.||+|.. .+|+.||+|.+.... ...+.+.+|++.+++++||||+++++++..++..++||||+++|+
T Consensus 23 ~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 102 (296)
T cd06655 23 RYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGS 102 (296)
T ss_pred EEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCc
Confidence 667899999999999984 789999999997543 235678889999999999999999999999999999999999999
Q ss_pred hhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Cccccc
Q 005177 528 LSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAKIA 604 (710)
Q Consensus 528 L~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~~~~ 604 (710)
|.+++.. .+++.++..++.|+++|++|||+. +++||||||+||+++.++.+||+|||+++........ ...+..
T Consensus 103 L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 179 (296)
T cd06655 103 LTDVVTETCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTP 179 (296)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCcCCCc
Confidence 9998876 568999999999999999999998 9999999999999999999999999998754322111 112334
Q ss_pred ccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhc
Q 005177 605 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 684 (710)
Q Consensus 605 ~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 684 (710)
.|.+||......++.++|||||||++|||+||+.|+......... . .+.... .............+.+++.+|
T Consensus 180 ~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~-~-----~~~~~~-~~~~~~~~~~~~~~~~li~~~ 252 (296)
T cd06655 180 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL-Y-----LIATNG-TPELQNPEKLSPIFRDFLNRC 252 (296)
T ss_pred cccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-H-----HHHhcC-CcccCCcccCCHHHHHHHHHH
Confidence 467788877777889999999999999999999998654321110 0 000000 000001112234567888999
Q ss_pred CCCCCCCCCCHHHHHHH
Q 005177 685 TRSTPSDRPSMEEALKL 701 (710)
Q Consensus 685 l~~~p~~RPs~~evl~~ 701 (710)
|+.||++||++.+++++
T Consensus 253 l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 253 LEMDVEKRGSAKELLQH 269 (296)
T ss_pred hhcChhhCCCHHHHhhC
Confidence 99999999999999863
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=299.81 Aligned_cols=248 Identities=17% Similarity=0.165 Sum_probs=182.7
Q ss_pred hhhhcCC--CCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 451 CEEAARP--QSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 451 ~~~ig~g--~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
.++||+| +|+.||++.. .+|+.||||+++... ...+.+.+|+++++.++|||||+++++|.+++..++||||++
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 82 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 82 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence 4689999 6789999985 789999999997542 234567789999999999999999999999999999999999
Q ss_pred CCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC---
Q 005177 525 NGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--- 597 (710)
Q Consensus 525 ~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--- 597 (710)
+|+|.+++.. .+++.....++.|+++||+|||+. +|+||||||+||+++.++.++++|||..........
T Consensus 83 ~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~ 159 (327)
T cd08227 83 YGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLR 159 (327)
T ss_pred CCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhcccccccccc
Confidence 9999999853 468899999999999999999998 999999999999999999999999986432211000
Q ss_pred ------CCcccccccCchhhhhc--cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccc--ccccccccc--------
Q 005177 598 ------SFPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP--IDGLLGEMY-------- 659 (710)
Q Consensus 598 ------~~~~~~~~~~~~e~~~~--~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~--~~~~~~~~~-------- 659 (710)
........+.+||+... ..++.++|||||||++|||+||+.|+.......... .........
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (327)
T cd08227 160 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAE 239 (327)
T ss_pred ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhh
Confidence 01112223566777654 457889999999999999999999986321100000 000000000
Q ss_pred ----------------cccc---cC-------CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 660 ----------------NENE---VG-------SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 660 ----------------~~~~---~~-------~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+... .. ..+........+.+++.+|++.||++|||++|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 240 ELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred hcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 0000 00 000111223467899999999999999999999863
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-34 Score=324.70 Aligned_cols=246 Identities=16% Similarity=0.157 Sum_probs=189.6
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+++..++||||++
T Consensus 6 Ii~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~e 85 (932)
T PRK13184 6 IIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIE 85 (932)
T ss_pred EEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCC
Confidence 678899999999999985 568999999997532 235678899999999999999999999999999999999999
Q ss_pred CCChhhhhhc-------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 525 NGNLSEKIRT-------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 525 ~gsL~~~l~~-------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
+|+|.+++.. ..++....+++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 86 GGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFGLAk~ 162 (932)
T PRK13184 86 GYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWGAAIF 162 (932)
T ss_pred CCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecCccee
Confidence 9999998853 234667789999999999999998 999999999999999999999999999876
Q ss_pred ccccCC--------------------CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc
Q 005177 592 TQLADG--------------------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI 651 (710)
Q Consensus 592 ~~~~~~--------------------~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~ 651 (710)
...... ....++..|.+||...+..++.++|||||||++|||+||+.|+....... ...
T Consensus 163 i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k-i~~ 241 (932)
T PRK13184 163 KKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK-ISY 241 (932)
T ss_pred cccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh-hhh
Confidence 521000 00113445778898888889999999999999999999999986422110 000
Q ss_pred cccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCC-CHHHHHHHHhcc
Q 005177 652 DGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRP-SMEEALKLLSGL 705 (710)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RP-s~~evl~~L~~~ 705 (710)
. ....++.... ...+....+.+++.+|++.||++|| +++++.+.|+..
T Consensus 242 ~---~~i~~P~~~~---p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~ 290 (932)
T PRK13184 242 R---DVILSPIEVA---PYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPH 290 (932)
T ss_pred h---hhccChhhcc---ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 0 1111111010 0112234566888999999999996 567777777654
|
|
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-34 Score=295.51 Aligned_cols=242 Identities=14% Similarity=0.115 Sum_probs=187.4
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||++.. .+++.||||.+..... ..+.+.+|+.++.+++|+||+++++++.+++..++||||++
T Consensus 4 ~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 83 (285)
T cd05630 4 QYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMN 83 (285)
T ss_pred eeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecC
Confidence 557899999999999985 6789999999875321 23456789999999999999999999999999999999999
Q ss_pred CCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC-C
Q 005177 525 NGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-F 599 (710)
Q Consensus 525 ~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~-~ 599 (710)
+|+|.+++.. .+++.++..++.|++.||.|||+. +|+||||||+||++++++.++++|||++......... .
T Consensus 84 g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05630 84 GGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG 160 (285)
T ss_pred CCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccC
Confidence 9999998853 467888999999999999999988 9999999999999999999999999998754322111 1
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 679 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (710)
..+...+.+||......++.++|||||||++|||++|+.|+........+. ......+....... ......+.+
T Consensus 161 ~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~ 234 (285)
T cd05630 161 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE---EVERLVKEVQEEYS---EKFSPDARS 234 (285)
T ss_pred CCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHH---HHHhhhhhhhhhcC---ccCCHHHHH
Confidence 123344678888888888999999999999999999999987432211100 00111111000001 112245678
Q ss_pred HHhhcCCCCCCCCCC-----HHHHHH
Q 005177 680 VALLCTRSTPSDRPS-----MEEALK 700 (710)
Q Consensus 680 l~~~Cl~~~p~~RPs-----~~evl~ 700 (710)
++.+|++.||++||| ++|+++
T Consensus 235 li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 235 LCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred HHHHHhhcCHHHccCCCCCchHHHHc
Confidence 899999999999999 888876
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-34 Score=292.91 Aligned_cols=237 Identities=17% Similarity=0.259 Sum_probs=179.1
Q ss_pred hhhcCCCCCccEEEEcC-C-------CcEEEEEEeeccch-hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 452 EEAARPQSAAGCKAVLP-T-------GITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~~-~-------g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
+.||+|+||.||+|... . ...||+|.+..... ..+.+.+|+.++++++|||||++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 36899999999999752 2 33588998865432 356788899999999999999999999998999999999
Q ss_pred cCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc--------eEEcccCcccc
Q 005177 523 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME--------PHLAEFGFKYL 591 (710)
Q Consensus 523 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~--------~kl~DfGla~~ 591 (710)
+++|+|.++++. ..++..+..++.|++.||+|||+. +|+||||||+||+++.++. ++++|||++..
T Consensus 81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~ 157 (258)
T cd05078 81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT 157 (258)
T ss_pred CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence 999999999965 368899999999999999999998 9999999999999987765 58999998765
Q ss_pred ccccCCCCcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcch
Q 005177 592 TQLADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 670 (710)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (710)
..... ....... +.+||+... ..++.++|||||||++|||++|+.++......... ....... ...+..
T Consensus 158 ~~~~~-~~~~~~~-y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~------~~~~~~~-~~~~~~- 227 (258)
T cd05078 158 VLPKE-ILLERIP-WVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK------LQFYEDR-HQLPAP- 227 (258)
T ss_pred cCCch-hccccCC-ccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH------HHHHHcc-ccCCCC-
Confidence 43211 1112233 567777655 45788999999999999999996544322111100 0011111 000111
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHh
Q 005177 671 QDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 703 (710)
Q Consensus 671 ~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~ 703 (710)
...++.+++.+||+.+|++|||++|+++.|+
T Consensus 228 --~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 228 --KWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred --CcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 1245678999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=295.26 Aligned_cols=246 Identities=16% Similarity=0.204 Sum_probs=186.6
Q ss_pred cCCchhhhhhcCCCCCccEEEEcC------CCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCce
Q 005177 445 SFNSTECEEAARPQSAAGCKAVLP------TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 516 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~~------~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 516 (710)
.|. ..+.+|+|+||.||+|... .+..||+|.+.... .....+.+|+..+++++||||+++++++.+.+..
T Consensus 7 ~~~--i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (288)
T cd05061 7 KIT--LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPT 84 (288)
T ss_pred Hce--eeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence 355 6789999999999998642 35689999987543 2344578899999999999999999999999999
Q ss_pred eEEEeecCCCChhhhhhcC------------CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEc
Q 005177 517 YLLYDYLPNGNLSEKIRTK------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 584 (710)
Q Consensus 517 ~lv~Ey~~~gsL~~~l~~~------------~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~ 584 (710)
++||||+++|+|.++++.. ..+....+++.|++.||+|||+. +|+||||||+||++++++.+|++
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~L~ 161 (288)
T cd05061 85 LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIG 161 (288)
T ss_pred EEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEEEC
Confidence 9999999999999999641 24567788999999999999998 99999999999999999999999
Q ss_pred ccCccccccccCCCC----cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccc
Q 005177 585 EFGFKYLTQLADGSF----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMY 659 (710)
Q Consensus 585 DfGla~~~~~~~~~~----~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 659 (710)
|||+++......... ......+.+||......++.++|||||||++|||++ |+.|+..... .+ ......
T Consensus 162 Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~-~~-----~~~~~~ 235 (288)
T cd05061 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQ-----VLKFVM 235 (288)
T ss_pred cCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH-HH-----HHHHHH
Confidence 999987543211111 111123567787777778999999999999999999 5666643211 10 111111
Q ss_pred cccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhc
Q 005177 660 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 704 (710)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~ 704 (710)
+......+ ......+.+++.+|++.+|++|||+.|+++.|++
T Consensus 236 ~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~ 277 (288)
T cd05061 236 DGGYLDQP---DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 277 (288)
T ss_pred cCCCCCCC---CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 11101101 1123467889999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=296.50 Aligned_cols=245 Identities=21% Similarity=0.274 Sum_probs=187.9
Q ss_pred hhhhhcCCCCCccEEEEc--------CCCcEEEEEEeeccc--hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeE
Q 005177 450 ECEEAARPQSAAGCKAVL--------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~--------~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 518 (710)
..+.+|+|+||.||++.. ..+..||+|.++... .....+..|++++.++ +||||++++++|..++..++
T Consensus 16 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 95 (314)
T cd05099 16 LGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYV 95 (314)
T ss_pred eeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEE
Confidence 668899999999999963 235679999987532 2355678899999999 69999999999999999999
Q ss_pred EEeecCCCChhhhhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc
Q 005177 519 LYDYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~ 580 (710)
||||+++|+|.+++.. .++|.+..+++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 96 v~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~~~~~ 172 (314)
T cd05099 96 IVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVLVTEDNV 172 (314)
T ss_pred EEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEEEcCCCc
Confidence 9999999999999853 257888899999999999999998 9999999999999999999
Q ss_pred eEEcccCccccccccCCC---Cc-ccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccc
Q 005177 581 PHLAEFGFKYLTQLADGS---FP-AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLL 655 (710)
Q Consensus 581 ~kl~DfGla~~~~~~~~~---~~-~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~ 655 (710)
+|++|||+++........ .. .....+.+||......++.++|||||||++|||++ |+.|+.... ... ..
T Consensus 173 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~-~~~-----~~ 246 (314)
T cd05099 173 MKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIP-VEE-----LF 246 (314)
T ss_pred EEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCC-HHH-----HH
Confidence 999999999765321110 11 11123677888777788999999999999999999 777764321 110 00
Q ss_pred cccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 656 GEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
...........+. .....+.+++.+|+..+|++|||+.|+++.|+++.
T Consensus 247 ~~~~~~~~~~~~~---~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~ 294 (314)
T cd05099 247 KLLREGHRMDKPS---NCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVL 294 (314)
T ss_pred HHHHcCCCCCCCC---CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 0111110000011 12245668999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=295.11 Aligned_cols=244 Identities=17% Similarity=0.225 Sum_probs=188.0
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.||+|+||.||++.. .+|..||+|.++.. ......+.+|++++.+++||||+++++++...+..++||||++++
T Consensus 5 ~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (286)
T cd06622 5 VLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAG 84 (286)
T ss_pred hhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCC
Confidence 678899999999999986 47999999998753 223567888999999999999999999999999999999999999
Q ss_pred Chhhhhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCcc
Q 005177 527 NLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPA 601 (710)
Q Consensus 527 sL~~~l~~-----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~ 601 (710)
+|.+++.. ..++.....++.+++.||.|||+.+ +|+||||||+||+++.++.+||+|||+++...........
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 162 (286)
T cd06622 85 SLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTNI 162 (286)
T ss_pred CHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCCccccCC
Confidence 99999876 5788999999999999999999632 8999999999999999999999999998754322222222
Q ss_pred cccccCchhhhhcc------CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHH
Q 005177 602 KIAWTESGEFYNAM------KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 675 (710)
Q Consensus 602 ~~~~~~~~e~~~~~------~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (710)
+...+.+||..... .++.++|||||||++|||+||+.|+........ . .....+.+.... ....+...
T Consensus 163 ~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~--~-~~~~~~~~~~~~---~~~~~~~~ 236 (286)
T cd06622 163 GCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANI--F-AQLSAIVDGDPP---TLPSGYSD 236 (286)
T ss_pred CccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhH--H-HHHHHHhhcCCC---CCCcccCH
Confidence 23335567765433 347789999999999999999999864321110 0 011111111101 11122345
Q ss_pred HHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 676 LVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 676 ~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+.+++.+|++.+|++||+++|+++.
T Consensus 237 ~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 237 DAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred HHHHHHHHHcccCcccCCCHHHHhcC
Confidence 67789999999999999999999874
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=290.76 Aligned_cols=247 Identities=17% Similarity=0.171 Sum_probs=190.9
Q ss_pred hhhhhcCCCCCccEEEEcCC----CcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVLPT----GITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~----g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
..+.+|+|+||.||+|...+ ...||||...... ...+.+.+|+.++++++||||+++++++.+ +..++||||+
T Consensus 10 ~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e~~ 88 (270)
T cd05056 10 LGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMELA 88 (270)
T ss_pred eeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEEcC
Confidence 56789999999999998533 3479999987643 345678899999999999999999999875 5678999999
Q ss_pred CCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--
Q 005177 524 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 598 (710)
Q Consensus 524 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~-- 598 (710)
++|+|.+++.. ..++..+..++.+++.|++|||+. +++||||||+||+++.++.+|++|||+++........
T Consensus 89 ~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 165 (270)
T cd05056 89 PLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKA 165 (270)
T ss_pred CCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeecccccceec
Confidence 99999999965 468999999999999999999998 9999999999999999999999999998765322111
Q ss_pred -CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHH
Q 005177 599 -FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 676 (710)
Q Consensus 599 -~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (710)
.......+.+||......++.++|||||||++|||++ |+.|+........ ...+........+. .....
T Consensus 166 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~------~~~~~~~~~~~~~~---~~~~~ 236 (270)
T cd05056 166 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV------IGRIENGERLPMPP---NCPPT 236 (270)
T ss_pred CCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH------HHHHHcCCcCCCCC---CCCHH
Confidence 1111123667787777778899999999999999986 8888864332110 00110000011111 12345
Q ss_pred HHHHHhhcCCCCCCCCCCHHHHHHHHhccCCCC
Q 005177 677 VLDVALLCTRSTPSDRPSMEEALKLLSGLKPHG 709 (710)
Q Consensus 677 ~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~~ 709 (710)
+.+++.+|+..+|++|||+.|+++.|+++....
T Consensus 237 ~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~~ 269 (270)
T cd05056 237 LYSLMTKCWAYDPSKRPRFTELKAQLSDILQEE 269 (270)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 778889999999999999999999999887543
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=293.62 Aligned_cols=250 Identities=14% Similarity=0.162 Sum_probs=187.2
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhcc-CCCCceeEEEEEEc-----C
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYN-----R 513 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~-----~ 513 (710)
+..++|. ....||+|+||.||++.. .+|+.+|+|.++........+.+|+.++.++ +||||++++++|.. +
T Consensus 15 ~~~~~~~--~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~ 92 (286)
T cd06638 15 DPSDTWE--IIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNG 92 (286)
T ss_pred Cccccee--eeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCC
Confidence 3445566 778899999999999985 6788999999876444456678899999998 69999999999853 4
Q ss_pred CceeEEEeecCCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccC
Q 005177 514 HQAYLLYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG 587 (710)
Q Consensus 514 ~~~~lv~Ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG 587 (710)
+..++||||+++|+|.++++. ..++.....++.|+++||.|||+. +|+||||||+||++++++.+|++|||
T Consensus 93 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~kl~dfg 169 (286)
T cd06638 93 DQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGVKLVDFG 169 (286)
T ss_pred CeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCEEEccCC
Confidence 568999999999999998752 456778889999999999999998 99999999999999999999999999
Q ss_pred ccccccccCC--CCcccccccCchhhhh-----ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccc
Q 005177 588 FKYLTQLADG--SFPAKIAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYN 660 (710)
Q Consensus 588 la~~~~~~~~--~~~~~~~~~~~~e~~~-----~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~ 660 (710)
+++....... ....+...+.+||+.. ...++.++||||+||++|||+||+.|+........... ......
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~---~~~~~~ 246 (286)
T cd06638 170 VSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFK---IPRNPP 246 (286)
T ss_pred ceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhh---ccccCC
Confidence 9875432211 1111333356777653 23468899999999999999999999874432211100 000000
Q ss_pred ccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 005177 661 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLL 702 (710)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L 702 (710)
+. ...+.. ....+.+++.+|++.+|++|||+.|+++..
T Consensus 247 ~~-~~~~~~---~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 247 PT-LHQPEL---WSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred Cc-ccCCCC---cCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 00 110111 123577889999999999999999998753
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=316.49 Aligned_cols=245 Identities=18% Similarity=0.190 Sum_probs=178.1
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcC--------CceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--------HQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--------~~~~lv~ 520 (710)
..+.||+|+||.||+|.. .+|+.||||++.... ....+|+.++++++|||||++++++... ...++||
T Consensus 70 ~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvm 146 (440)
T PTZ00036 70 LGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVM 146 (440)
T ss_pred EeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEE
Confidence 778999999999999986 678999999986432 2345799999999999999999987542 2467999
Q ss_pred eecCCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC-ceEEcccCcccccc
Q 005177 521 DYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM-EPHLAEFGFKYLTQ 593 (710)
Q Consensus 521 Ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~-~~kl~DfGla~~~~ 593 (710)
||+++ ++.+++.. .+++.....++.|+++||+|||+. +|+||||||+|||++.++ .+||+|||+++...
T Consensus 147 E~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~ 222 (440)
T PTZ00036 147 EFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLL 222 (440)
T ss_pred ecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeeccccchhcc
Confidence 99984 77776642 467888899999999999999998 999999999999999664 79999999998653
Q ss_pred ccCCC-CcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc-cccccc-------ccccc
Q 005177 594 LADGS-FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GLLGEM-------YNENE 663 (710)
Q Consensus 594 ~~~~~-~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~-~~~~~~-------~~~~~ 663 (710)
..... ...+..+|.+||+..+ ..++.++|||||||++|||+||+.||.+.......... ...... ..+..
T Consensus 223 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~ 302 (440)
T PTZ00036 223 AGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNY 302 (440)
T ss_pred CCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhh
Confidence 22211 1123455777887654 46889999999999999999999988754321100000 000000 00000
Q ss_pred ----cC--CCcchH-----HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 664 ----VG--SSSSLQ-----DEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 664 ----~~--~~~~~~-----~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.. ...... ....++.+++.+||+.||++|||+.|++++
T Consensus 303 ~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 303 ADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred hcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 00 000011 112467899999999999999999998854
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-35 Score=275.99 Aligned_cols=246 Identities=19% Similarity=0.185 Sum_probs=194.0
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 520 (710)
.++ ..++||+|.|+.||+... ++|+.+|+|.+... +...+.+.+|+++-..++|||||+|.+-+.+.+..|||+
T Consensus 12 ~y~--l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 12 NYD--VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred hhh--HHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 355 788999999999999874 88999999988753 335677899999999999999999999999999999999
Q ss_pred eecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC---CceEEcccCcccccccc
Q 005177 521 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN---MEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 521 Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~---~~~kl~DfGla~~~~~~ 595 (710)
|+|.||+|..-+-. .-+....-.++.||.+||.|+|.. +|||||+||+|++|.+. -.+|++|||+|.-.+..
T Consensus 90 e~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g 166 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDG 166 (355)
T ss_pred ecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEEeCCc
Confidence 99999998755432 335566778999999999999999 99999999999999753 35899999999876621
Q ss_pred C-CCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 596 D-GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 596 ~-~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
. .....+++.+.+||+....+++..+|||+-|||||-|+.|..||.++.. . +...++........++.+....
T Consensus 167 ~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~--~----rlye~I~~g~yd~~~~~w~~is 240 (355)
T KOG0033|consen 167 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--H----RLYEQIKAGAYDYPSPEWDTVT 240 (355)
T ss_pred cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH--H----HHHHHHhccccCCCCcccCcCC
Confidence 1 1111255667788999999999999999999999999999999976331 1 1122222222112233455556
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
++..+++.+++..||.+|.|+.|++++
T Consensus 241 ~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 241 PEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred HHHHHHHHHHhccChhhhccHHHHhCC
Confidence 677788899999999999999888753
|
|
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=295.90 Aligned_cols=245 Identities=19% Similarity=0.262 Sum_probs=186.9
Q ss_pred hhhhhcCCCCCccEEEEc-CCCc----EEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGI----TVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~----~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
..+.||+|+||.||+|.. .+|. .||+|.+..... ....+.+|+.++++++||||++++|+|... ..++|+||
T Consensus 11 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e~ 89 (303)
T cd05110 11 RVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQL 89 (303)
T ss_pred eccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cceeeehh
Confidence 667899999999999985 4454 579998875422 244688899999999999999999999764 56799999
Q ss_pred cCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC
Q 005177 523 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 599 (710)
Q Consensus 523 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 599 (710)
+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 90 ~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~ 166 (303)
T cd05110 90 MPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEY 166 (303)
T ss_pred cCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccccccccccCccccc
Confidence 999999999865 457888999999999999999998 99999999999999999999999999997653221111
Q ss_pred ----cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 600 ----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 600 ----~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
......+.+||...+..++.++|||||||++|||+| |+.|+.+... .. ....... ... ..... ...
T Consensus 167 ~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~-~~--~~~~~~~--~~~-~~~~~---~~~ 237 (303)
T cd05110 167 NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT-RE--IPDLLEK--GER-LPQPP---ICT 237 (303)
T ss_pred ccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH-HH--HHHHHHC--CCC-CCCCC---CCC
Confidence 111223567788777788999999999999999998 8888753221 00 0000000 000 11011 122
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
..+.+++..||..+|++||+|.|+++.|+.+..
T Consensus 238 ~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~ 270 (303)
T cd05110 238 IDVYMVMVKCWMIDADSRPKFKELAAEFSRMAR 270 (303)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 456788999999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=291.38 Aligned_cols=240 Identities=16% Similarity=0.206 Sum_probs=172.1
Q ss_pred hhcCCCCCccEEEEcCCC---cEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 453 EAARPQSAAGCKAVLPTG---ITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~~~g---~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
+||+|+||.||+|...++ ..+++|.++... ...+.+.+|+..++.++|||||+++++|.+....++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 589999999999975433 356677766432 245678899999999999999999999999999999999999999
Q ss_pred hhhhhhcC------CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC----C
Q 005177 528 LSEKIRTK------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD----G 597 (710)
Q Consensus 528 L~~~l~~~------~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~----~ 597 (710)
|.++++.. .++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||++....... .
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 99999742 34556678999999999999998 99999999999999999999999999876422110 0
Q ss_pred CCcccccccCchhhhhc-------cCCccccceeeHHHHHHHHHhCCC-CCCCCCCCCcccc---cccccccccccccCC
Q 005177 598 SFPAKIAWTESGEFYNA-------MKEEMYMDVYGFGEIILEILTNGR-LTNAGSSLQNKPI---DGLLGEMYNENEVGS 666 (710)
Q Consensus 598 ~~~~~~~~~~~~e~~~~-------~~~~~~~DVySfGvvl~Elltg~~-p~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 666 (710)
....+...+.+||+... ...+.++|||||||++|||++++. |+..... ..... ........++. .
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~-~-- 234 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD-REVLNHVIKDQQVKLFKPQ-L-- 234 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHhhcccccCCCc-c--
Confidence 11111222456676532 235678999999999999998654 5532221 11000 00001111111 1
Q ss_pred CcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHh
Q 005177 667 SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 703 (710)
Q Consensus 667 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~ 703 (710)
.. .....+.+++..|| .+|++||+|+||++.|.
T Consensus 235 ~~---~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 235 EL---PYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CC---CCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 11 12234566777899 57999999999998874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-34 Score=301.17 Aligned_cols=233 Identities=16% Similarity=0.127 Sum_probs=181.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccC-CCCceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
..+.||+|+||.||+|.. .+|+.||||.+.... ...+.+..|.+++..+. |++|+++++++.+.+..|+||||+
T Consensus 4 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~ 83 (323)
T cd05615 4 FLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYV 83 (323)
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCC
Confidence 567899999999999985 578999999998532 22455677888888776 577888999999999999999999
Q ss_pred CCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--CC
Q 005177 524 PNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SF 599 (710)
Q Consensus 524 ~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--~~ 599 (710)
++|+|.+++.. .+++.+...++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++....... ..
T Consensus 84 ~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~ 160 (323)
T cd05615 84 NGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRT 160 (323)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCCCCccccC
Confidence 99999999865 568999999999999999999998 999999999999999999999999999875322111 11
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 679 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (710)
..+...+.+||+.....++.++|||||||++|||+||+.|+.+..... ....+.... ...+. .....+.+
T Consensus 161 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~------~~~~i~~~~-~~~p~---~~~~~~~~ 230 (323)
T cd05615 161 FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE------LFQSIMEHN-VSYPK---SLSKEAVS 230 (323)
T ss_pred ccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCC-CCCCc---cCCHHHHH
Confidence 123444778898888888999999999999999999999986432110 111111111 11111 12345678
Q ss_pred HHhhcCCCCCCCCCCH
Q 005177 680 VALLCTRSTPSDRPSM 695 (710)
Q Consensus 680 l~~~Cl~~~p~~RPs~ 695 (710)
++.+|++.+|++|++.
T Consensus 231 li~~~l~~~p~~R~~~ 246 (323)
T cd05615 231 ICKGLMTKHPSKRLGC 246 (323)
T ss_pred HHHHHcccCHhhCCCC
Confidence 8999999999999984
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-33 Score=291.69 Aligned_cols=248 Identities=19% Similarity=0.212 Sum_probs=188.0
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcC--CceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~Ey~~ 524 (710)
..+.+|.|++|.||++.. .+++.+|+|.+..... ....+.+|++++++++||||++++++|.+. +..++||||++
T Consensus 5 ~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 84 (287)
T cd06621 5 ELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCE 84 (287)
T ss_pred EEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecC
Confidence 667899999999999996 5689999999975432 456788899999999999999999998654 46899999999
Q ss_pred CCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC
Q 005177 525 NGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 598 (710)
Q Consensus 525 ~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 598 (710)
+|+|.+++.. .++......++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++.........
T Consensus 85 ~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~ 161 (287)
T cd06621 85 GGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAG 161 (287)
T ss_pred CCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeeccccccccccccc
Confidence 9999988753 356778889999999999999998 9999999999999999999999999998654322111
Q ss_pred CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccccc--ccC-CCcchHHHHH
Q 005177 599 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN--EVG-SSSSLQDEIK 675 (710)
Q Consensus 599 ~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~ 675 (710)
.......+.+||......++.++||||+||++|||+||+.|+........... .......+.. ... ..........
T Consensus 162 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (287)
T cd06621 162 TFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPI-ELLSYIVNMPNPELKDEPGNGIKWSE 240 (287)
T ss_pred cccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChH-HHHHHHhcCCchhhccCCCCCCchHH
Confidence 11223346678887777889999999999999999999999875432111111 0111111100 000 0000011235
Q ss_pred HHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 676 LVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 676 ~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+.+++.+|++.+|++||||.|+++.
T Consensus 241 ~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 241 EFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 67899999999999999999999874
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-33 Score=292.48 Aligned_cols=242 Identities=18% Similarity=0.168 Sum_probs=186.0
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
..+.+|+|+||.||+|.. .+|..||+|.+..... ..+.+.+|++.+++++||||+++++++..++..++||||+++|+
T Consensus 16 i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 95 (292)
T cd06644 16 IIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGA 95 (292)
T ss_pred hhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCc
Confidence 678899999999999986 5689999999976433 35678889999999999999999999999999999999999999
Q ss_pred hhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Cccc
Q 005177 528 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAK 602 (710)
Q Consensus 528 L~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~~ 602 (710)
|..++.. .+++.....++.|+++|++|||+. +|+||||||+||+++.++.+||+|||++......... ...+
T Consensus 96 l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 172 (292)
T cd06644 96 VDAIMLELDRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIG 172 (292)
T ss_pred HHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceeccccccccceecC
Confidence 9888753 568999999999999999999998 9999999999999999999999999987653221111 1112
Q ss_pred ccccCchhhhh-----ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 603 IAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 603 ~~~~~~~e~~~-----~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
...|.+||+.. ...++.++|||||||++|||+||+.|+........ ..+..... .............+
T Consensus 173 ~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~~~~ 245 (292)
T cd06644 173 TPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV------LLKIAKSE-PPTLSQPSKWSMEF 245 (292)
T ss_pred CccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHH------HHHHhcCC-CccCCCCcccCHHH
Confidence 33466777653 33467789999999999999999988764321110 01111100 00000111223457
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 678 LDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+++.+||..+|++||+++|+++.
T Consensus 246 ~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 246 RDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred HHHHHHHhcCCcccCcCHHHHhcC
Confidence 788999999999999999999763
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-33 Score=288.07 Aligned_cols=241 Identities=17% Similarity=0.247 Sum_probs=188.0
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccc-------hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA-------TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~-------~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
..+.||+|+||.||+|...+|..+|||.++... ...+.+.+|++.+++++|+||++++++|.+.+..++||||
T Consensus 4 ~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (265)
T cd06631 4 KGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEF 83 (265)
T ss_pred ccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEec
Confidence 567899999999999998899999999987532 1235688899999999999999999999999999999999
Q ss_pred cCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC---
Q 005177 523 LPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--- 597 (710)
Q Consensus 523 ~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--- 597 (710)
+++|+|.+++.. ..++.....++.|++.||+|||+. +|+|+||||+||++++++.+|++|||+++.......
T Consensus 84 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (265)
T cd06631 84 VPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGT 160 (265)
T ss_pred CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhhhcccccc
Confidence 999999999965 467888899999999999999998 999999999999999999999999999875421110
Q ss_pred -----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHH
Q 005177 598 -----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 672 (710)
Q Consensus 598 -----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (710)
....+...+.+||+..+..++.++|||||||++|||+||+.|+.................. .+. . +. .
T Consensus 161 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~-~--~~---~ 233 (265)
T cd06631 161 HSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGL-MPR-L--PD---S 233 (265)
T ss_pred ccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCC-CCC-C--CC---C
Confidence 0111334467788887778889999999999999999999998643211110000000000 000 1 11 1
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 673 EIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
....+.+++.+|++.+|++||++.|+++
T Consensus 234 ~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 234 FSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 2345678889999999999999999875
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-34 Score=311.52 Aligned_cols=245 Identities=15% Similarity=0.107 Sum_probs=185.0
Q ss_pred chhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 448 STECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 448 ~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
+.....||+|+||.||++.. .+++.||||.... ..+.+|++++++++|||||++++++..++..++||||+. |
T Consensus 171 y~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-----~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~ 244 (461)
T PHA03211 171 FAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-----ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-S 244 (461)
T ss_pred eEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-----cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-C
Confidence 33778899999999999986 4588999997532 335689999999999999999999999999999999995 7
Q ss_pred Chhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC----C
Q 005177 527 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS----F 599 (710)
Q Consensus 527 sL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~----~ 599 (710)
+|.+++.. .++|.++..|+.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++........ .
T Consensus 245 ~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 321 (461)
T PHA03211 245 DLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYG 321 (461)
T ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceecccccccccccc
Confidence 89888854 478999999999999999999998 9999999999999999999999999998765322111 1
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCC-Cccccc----ccccc--c-ccc----------
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSL-QNKPID----GLLGE--M-YNE---------- 661 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~-~~~~~~----~~~~~--~-~~~---------- 661 (710)
..++..|.+||+..+..++.++|||||||++|||++|+.+++..... ...... ..+.+ . .+.
T Consensus 322 ~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~ 401 (461)
T PHA03211 322 IAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLV 401 (461)
T ss_pred cCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHH
Confidence 12344577889888888999999999999999999998776532211 000000 00000 0 000
Q ss_pred -----------cccCCCcchH---HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 662 -----------NEVGSSSSLQ---DEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 662 -----------~~~~~~~~~~---~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
........+. .....+.+++.+|++.||++|||+.|++++
T Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 402 SQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0000001111 112357789999999999999999999875
|
|
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-33 Score=289.22 Aligned_cols=245 Identities=18% Similarity=0.245 Sum_probs=189.8
Q ss_pred hhhhhcCCCCCccEEEEc-CCCc----EEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGI----TVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~----~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
..+.||+|+||.||+|.. .+|. .||+|.+..... ....+.+|++.+++++||||++++++|.. +..++||||
T Consensus 11 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~ 89 (279)
T cd05057 11 KIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLITQL 89 (279)
T ss_pred EcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEEEec
Confidence 668899999999999985 2333 689999876532 35678899999999999999999999987 788999999
Q ss_pred cCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC
Q 005177 523 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 599 (710)
Q Consensus 523 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 599 (710)
+++|+|.+++.. ..++....+++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++.........
T Consensus 90 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 166 (279)
T cd05057 90 MPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEY 166 (279)
T ss_pred CCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCcccccccCcccce
Confidence 999999999975 467999999999999999999997 99999999999999999999999999987654222111
Q ss_pred c---c-cccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 600 P---A-KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 600 ~---~-~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
. . ....+.+||......++.++|||||||++||++| |+.|+..... ... ...+........+. ...
T Consensus 167 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-~~~-----~~~~~~~~~~~~~~---~~~ 237 (279)
T cd05057 167 HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA-VEI-----PDLLEKGERLPQPP---ICT 237 (279)
T ss_pred ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH-HHH-----HHHHhCCCCCCCCC---CCC
Confidence 1 0 1123556777777778899999999999999999 8888764321 110 01111111011111 112
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
..+.+++.+||..+|.+||++.++++.|+++..
T Consensus 238 ~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 238 IDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 356788899999999999999999999988643
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-33 Score=286.54 Aligned_cols=241 Identities=16% Similarity=0.212 Sum_probs=190.3
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.+|+|+||.||.+.. .+|..+|+|.+... ....+.+.+|++++++++|+||+++++++.+.+..++||||+++
T Consensus 4 ~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~ 83 (256)
T cd08221 4 PIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANG 83 (256)
T ss_pred EeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCC
Confidence 668899999999998874 67899999998753 33456788999999999999999999999999999999999999
Q ss_pred CChhhhhhcC----CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--CC
Q 005177 526 GNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SF 599 (710)
Q Consensus 526 gsL~~~l~~~----~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--~~ 599 (710)
|+|.+++... .++.+...++.|+++|++|||+. +++||||||+||++++++.+||+|||+++....... ..
T Consensus 84 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~ 160 (256)
T cd08221 84 GTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAET 160 (256)
T ss_pred CcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEcccccccccc
Confidence 9999999653 67888999999999999999998 999999999999999999999999999876533221 11
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 679 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (710)
..+...+.+||...+...+.++||||||+++|||++|+.|+....... ...++.... .. +........+.+
T Consensus 161 ~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~------~~~~~~~~~-~~--~~~~~~~~~~~~ 231 (256)
T cd08221 161 VVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN------LVVKIVQGN-YT--PVVSVYSSELIS 231 (256)
T ss_pred cCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHcCC-CC--CCccccCHHHHH
Confidence 113344677888777778889999999999999999999886432111 011111111 00 111122345778
Q ss_pred HHhhcCCCCCCCCCCHHHHHHHH
Q 005177 680 VALLCTRSTPSDRPSMEEALKLL 702 (710)
Q Consensus 680 l~~~Cl~~~p~~RPs~~evl~~L 702 (710)
++.+|+..+|++||++.|+++++
T Consensus 232 ~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 232 LVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred HHHHHcccCcccCCCHHHHhhCc
Confidence 88999999999999999998753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=291.65 Aligned_cols=249 Identities=20% Similarity=0.238 Sum_probs=187.4
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
....+|+|++|.||+|.. .+|+.||+|++..... ..+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 5 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~ 84 (286)
T cd07847 5 KLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDH 84 (286)
T ss_pred eeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCc
Confidence 567899999999999986 4689999999875321 245678999999999999999999999999999999999999
Q ss_pred CChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Ccc
Q 005177 526 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPA 601 (710)
Q Consensus 526 gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~ 601 (710)
+.+..++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++......... ...
T Consensus 85 ~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 161 (286)
T cd07847 85 TVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDYV 161 (286)
T ss_pred cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCCcccccCcc
Confidence 988888754 578999999999999999999998 9999999999999999999999999998765432211 111
Q ss_pred cccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc-ccc----cc-------------cccccccc
Q 005177 602 KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK-PID----GL-------------LGEMYNEN 662 (710)
Q Consensus 602 ~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~-~~~----~~-------------~~~~~~~~ 662 (710)
...++.+||...+ ..++.++|||||||++|||+||+.|+.+....... ... .. ......+.
T Consensus 162 ~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (286)
T cd07847 162 ATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPE 241 (286)
T ss_pred cccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCC
Confidence 2344667777654 45788999999999999999999998743321100 000 00 00000000
Q ss_pred ccCCCc---chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 663 EVGSSS---SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 663 ~~~~~~---~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.....+ ........+.+++.+|++.+|++||++.|++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 242 PETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred cccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 000000 011123567799999999999999999998753
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=294.23 Aligned_cols=248 Identities=17% Similarity=0.177 Sum_probs=187.3
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhcc-CCCCceeEEEEEEcC-----C
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNR-----H 514 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~-----~ 514 (710)
..++|. ..+.+|+|+||.||++.. .+|+.+|+|.+.........+.+|+.++.++ +|||++++++++... +
T Consensus 20 ~~~~y~--~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 97 (291)
T cd06639 20 PTDTWE--IIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGG 97 (291)
T ss_pred CCCCeE--EEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCC
Confidence 345566 778899999999999986 6789999999976544456678889999988 799999999998753 3
Q ss_pred ceeEEEeecCCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCc
Q 005177 515 QAYLLYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 588 (710)
Q Consensus 515 ~~~lv~Ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl 588 (710)
..++||||+++|+|.++++. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 98 ~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~kl~dfg~ 174 (291)
T cd06639 98 QLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVKLVDFGV 174 (291)
T ss_pred eeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEeeccc
Confidence 58999999999999998752 468889999999999999999998 999999999999999999999999999
Q ss_pred cccccccCCC--CcccccccCchhhhhcc-----CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccc
Q 005177 589 KYLTQLADGS--FPAKIAWTESGEFYNAM-----KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNE 661 (710)
Q Consensus 589 a~~~~~~~~~--~~~~~~~~~~~e~~~~~-----~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 661 (710)
++........ ...+...+.+||..... .++.++|||||||++|||++|+.|+........ ..++...
T Consensus 175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~------~~~~~~~ 248 (291)
T cd06639 175 SAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT------LFKIPRN 248 (291)
T ss_pred chhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH------HHHHhcC
Confidence 8754322111 11223336677765432 357899999999999999999999864321110 0011000
Q ss_pred cccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 662 NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.... .....+....+.+++.+|++.+|++||++.|++++
T Consensus 249 ~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 249 PPPT-LLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred CCCC-CCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 0000 00111223457789999999999999999999763
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=287.52 Aligned_cols=240 Identities=16% Similarity=0.177 Sum_probs=188.1
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.+|+|+||.||++.. .++..+|+|.++.. ....+.+.+|+.++++++||||+++++++.+++..++||||+++|
T Consensus 4 ~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 83 (255)
T cd08219 4 VLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGG 83 (255)
T ss_pred EEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCC
Confidence 567899999999999985 57889999998643 234567788999999999999999999999999999999999999
Q ss_pred Chhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Cc
Q 005177 527 NLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FP 600 (710)
Q Consensus 527 sL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~ 600 (710)
+|.+++.. ..+.....+++.|++.||.|||+. +|+|+||||+||++++++.++++|||.++........ ..
T Consensus 84 ~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 160 (255)
T cd08219 84 DLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTY 160 (255)
T ss_pred cHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeecccccccccc
Confidence 99998854 346778889999999999999998 9999999999999999999999999998755322111 11
Q ss_pred ccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHH
Q 005177 601 AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 680 (710)
Q Consensus 601 ~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 680 (710)
.+...+.+||......++.++||||||+++|||++|+.|+....... .............+. .....+.++
T Consensus 161 ~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~l 231 (255)
T cd08219 161 VGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKN------LILKVCQGSYKPLPS---HYSYELRSL 231 (255)
T ss_pred cCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHH------HHHHHhcCCCCCCCc---ccCHHHHHH
Confidence 13334667888887788999999999999999999999986432110 000110010000011 122456788
Q ss_pred HhhcCCCCCCCCCCHHHHHHH
Q 005177 681 ALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 681 ~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+.+||+.||++||++.|++..
T Consensus 232 i~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 232 IKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHHHHhCCcccCCCHHHHhhc
Confidence 899999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=295.88 Aligned_cols=242 Identities=17% Similarity=0.274 Sum_probs=189.0
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
....||+|+||.||++.. .++..||||++.... ...+.+.+|+..+++++||||+++++++..++..++||||+++++
T Consensus 26 ~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~ 105 (292)
T cd06658 26 SFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGA 105 (292)
T ss_pred hhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCc
Confidence 345689999999999985 578999999987543 235668899999999999999999999999999999999999999
Q ss_pred hhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Cccccc
Q 005177 528 LSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAKIA 604 (710)
Q Consensus 528 L~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~~~~ 604 (710)
|.+++.. .+++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......... ...+..
T Consensus 106 L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~ 182 (292)
T cd06658 106 LTDIVTHTRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTP 182 (292)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCc
Confidence 9998855 568899999999999999999998 9999999999999999999999999998654321111 111334
Q ss_pred ccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhc
Q 005177 605 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 684 (710)
Q Consensus 605 ~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 684 (710)
.+.+||......++.++|||||||++|||++|+.|+........ .. .......+. .... ......+.+++.+|
T Consensus 183 ~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~--~~-~~~~~~~~~-~~~~---~~~~~~~~~li~~~ 255 (292)
T cd06658 183 YWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA--MR-RIRDNLPPR-VKDS---HKVSSVLRGFLDLM 255 (292)
T ss_pred cccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HH-HHHhcCCCc-cccc---cccCHHHHHHHHHH
Confidence 46788888777888999999999999999999999864332110 00 011111111 1101 11223466788899
Q ss_pred CCCCCCCCCCHHHHHHH
Q 005177 685 TRSTPSDRPSMEEALKL 701 (710)
Q Consensus 685 l~~~p~~RPs~~evl~~ 701 (710)
+..||++|||++|+++.
T Consensus 256 l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 256 LVREPSQRATAQELLQH 272 (292)
T ss_pred ccCChhHCcCHHHHhhC
Confidence 99999999999999875
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-34 Score=294.02 Aligned_cols=244 Identities=23% Similarity=0.275 Sum_probs=188.3
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHH---HHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIK---IVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~---~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.||+|+||.||++.. .++..||+|.+........ ...+|+..+++++||||+++++++.+.+..++||||+++
T Consensus 3 ~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~ 82 (260)
T PF00069_consen 3 LVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPG 82 (260)
T ss_dssp EEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETT
T ss_pred EeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccccc
Confidence 457899999999999986 5677999999997644322 334589999999999999999999999999999999999
Q ss_pred CChhhhhh--cCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC--CCCcc
Q 005177 526 GNLSEKIR--TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--GSFPA 601 (710)
Q Consensus 526 gsL~~~l~--~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~--~~~~~ 601 (710)
++|.+++. ...++..+..++.|+++||+|||+. +|+||||||+||++++++.++|+|||.+....... .....
T Consensus 83 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 159 (260)
T PF00069_consen 83 GSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFV 159 (260)
T ss_dssp EBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSS
T ss_pred ccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccccccc
Confidence 99999997 4678999999999999999999998 99999999999999999999999999987531111 11112
Q ss_pred cccccCchhhhh-ccCCccccceeeHHHHHHHHHhCCCCCCCCCCC-CcccccccccccccccccCCCcchHHHHHHHHH
Q 005177 602 KIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSL-QNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 679 (710)
Q Consensus 602 ~~~~~~~~e~~~-~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (710)
....+.+||... ....+.++||||+|++++||++|+.|+...... ................ ..........+.+
T Consensus 160 ~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~ 235 (260)
T PF00069_consen 160 GTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSS----SQQSREKSEELRD 235 (260)
T ss_dssp SSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHH----TTSHTTSHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccccccc----ccccchhHHHHHH
Confidence 344577888877 778899999999999999999999998744100 0000000000000000 0000011257789
Q ss_pred HHhhcCCCCCCCCCCHHHHHH
Q 005177 680 VALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 680 l~~~Cl~~~p~~RPs~~evl~ 700 (710)
++.+|++.||++||++.|+++
T Consensus 236 li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 236 LIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHHHHSSSSGGGSTTHHHHHT
T ss_pred HHHHHccCChhHCcCHHHHhc
Confidence 999999999999999999975
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=290.06 Aligned_cols=247 Identities=21% Similarity=0.288 Sum_probs=186.8
Q ss_pred chhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-----------hHHHHHHHHHHHhccCCCCceeEEEEEEcCCc
Q 005177 448 STECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-----------RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ 515 (710)
Q Consensus 448 ~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-----------~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 515 (710)
+...+.+|+|++|.||+|.. .+|+.||||.++.... ..+.+.+|++.+++++||||+++++++...+.
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 82 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY 82 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence 34678899999999999985 5789999999864211 13457889999999999999999999999999
Q ss_pred eeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccc
Q 005177 516 AYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~ 593 (710)
.++||||+++|+|.++++. .+++..+..++.|++.|+.|||+. +++||||||+||+++.++.++++|||+++...
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~ 159 (272)
T cd06629 83 LSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGISKKSD 159 (272)
T ss_pred eEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeecccccccc
Confidence 9999999999999999876 467888889999999999999998 99999999999999999999999999987543
Q ss_pred ccCCC----CcccccccCchhhhhccC--CccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCC
Q 005177 594 LADGS----FPAKIAWTESGEFYNAMK--EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSS 667 (710)
Q Consensus 594 ~~~~~----~~~~~~~~~~~e~~~~~~--~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (710)
..... ...+...+.+||...... ++.++||||||+++||+++|+.|+......... . .......... .. .
T Consensus 160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~-~-~~~~~~~~~~-~~-~ 235 (272)
T cd06629 160 DIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAM-F-KLGNKRSAPP-IP-P 235 (272)
T ss_pred ccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHH-H-HhhccccCCc-CC-c
Confidence 21111 111223356777765443 788999999999999999999998643221110 0 0000000000 00 1
Q ss_pred cchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 668 SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 668 ~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
....+....+.+++.+|+..+|++||+++||+++
T Consensus 236 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 236 DVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred cccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 1111223567788999999999999999999864
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=295.30 Aligned_cols=242 Identities=16% Similarity=0.247 Sum_probs=189.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
....||+|+||.||++.. .+++.||+|.+.... ...+.+.+|+..+.+++||||+++++++..++..++||||+++++
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~ 104 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA 104 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence 455799999999999985 578999999997532 235667889999999999999999999999999999999999999
Q ss_pred hhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--CCccccc
Q 005177 528 LSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAKIA 604 (710)
Q Consensus 528 L~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--~~~~~~~ 604 (710)
|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....+..
T Consensus 105 L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~ 181 (297)
T cd06659 105 LTDIVSQTRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTP 181 (297)
T ss_pred HHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCc
Confidence 9998865 568999999999999999999998 999999999999999999999999999865432211 1112334
Q ss_pred ccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhc
Q 005177 605 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 684 (710)
Q Consensus 605 ~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 684 (710)
.+.+||+.....++.++|||||||++|||++|+.|+......... ........+. . .........+.+++.+|
T Consensus 182 ~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~---~~~~~~~~~~-~---~~~~~~~~~l~~~i~~~ 254 (297)
T cd06659 182 YWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM---KRLRDSPPPK-L---KNAHKISPVLRDFLERM 254 (297)
T ss_pred cccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHhccCCCC-c---cccCCCCHHHHHHHHHH
Confidence 467888887778899999999999999999999998743321100 0000000000 0 00111223567888899
Q ss_pred CCCCCCCCCCHHHHHHH
Q 005177 685 TRSTPSDRPSMEEALKL 701 (710)
Q Consensus 685 l~~~p~~RPs~~evl~~ 701 (710)
++.+|++||+++|+++.
T Consensus 255 l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 255 LTREPQERATAQELLDH 271 (297)
T ss_pred hcCCcccCcCHHHHhhC
Confidence 99999999999999874
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=287.92 Aligned_cols=239 Identities=18% Similarity=0.233 Sum_probs=181.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc------hhHHHHHHHHHHHhccCCCCceeEEEEEEc--CCceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA------TRIKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~------~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~lv~ 520 (710)
..+.+|+|+||.||+|.. .+|..||+|++.... ...+.+.+|++++++++||||+++++++.+ ++..+++|
T Consensus 6 ~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~ 85 (266)
T cd06651 6 RGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFM 85 (266)
T ss_pred ccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEE
Confidence 678999999999999985 568999999986431 234568889999999999999999999876 35788999
Q ss_pred eecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC--
Q 005177 521 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD-- 596 (710)
Q Consensus 521 Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~-- 596 (710)
||+++++|.+++.. .+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 86 e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 162 (266)
T cd06651 86 EYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMS 162 (266)
T ss_pred eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCcccccccccc
Confidence 99999999999875 467888899999999999999988 99999999999999999999999999987543211
Q ss_pred -C--CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 597 -G--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 597 -~--~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
. ....+...+.+||+.....++.++|||||||++|||+||+.|+........ ..........+. .....
T Consensus 163 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~------~~~~~ 234 (266)
T cd06651 163 GTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAA--IFKIATQPTNPQ------LPSHI 234 (266)
T ss_pred CCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHH--HHHHhcCCCCCC------Cchhc
Confidence 0 011133346778888777788999999999999999999999864321111 000000000110 01111
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
...+.+++ +|+..+|++||+|+|+++
T Consensus 235 ~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 235 SEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred CHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 12333444 788899999999999975
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-34 Score=306.43 Aligned_cols=191 Identities=14% Similarity=0.133 Sum_probs=162.8
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||++.. .+|+.||||.++... ...+.+.+|++++.+++||||+++++++.+++..++||||++
T Consensus 5 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~ 84 (360)
T cd05627 5 SLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLP 84 (360)
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCC
Confidence 668899999999999985 578999999997532 234567889999999999999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-----
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG----- 597 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~----- 597 (710)
+|+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 85 gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~ 161 (360)
T cd05627 85 GGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYR 161 (360)
T ss_pred CccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCccccccccccccc
Confidence 9999999865 467888889999999999999998 999999999999999999999999999864321100
Q ss_pred --------------------------------CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCC
Q 005177 598 --------------------------------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAG 643 (710)
Q Consensus 598 --------------------------------~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~ 643 (710)
....++..|.+||+.....++.++|||||||++|||+||+.||...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~ 239 (360)
T cd05627 162 NLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSE 239 (360)
T ss_pred ccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCC
Confidence 0011344577889888888999999999999999999999998744
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-33 Score=288.72 Aligned_cols=241 Identities=20% Similarity=0.236 Sum_probs=191.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
....+|.|++|.||+|.. .+|..||+|.+.... .....+.+|++++++++||||+++++++.++...++||||++++
T Consensus 5 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 84 (274)
T cd06609 5 LLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGG 84 (274)
T ss_pred hhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCC
Confidence 668899999999999985 578999999987542 23566888999999999999999999999999999999999999
Q ss_pred Chhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Ccccc
Q 005177 527 NLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAKI 603 (710)
Q Consensus 527 sL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~~~ 603 (710)
+|.+++.. ..++.....++.|++.|+.|||+. +|+||||||+||++++++.++++|||+++........ ...+.
T Consensus 85 ~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 161 (274)
T cd06609 85 SCLDLLKPGKLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGT 161 (274)
T ss_pred cHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeecccccccccccCC
Confidence 99999986 578999999999999999999998 9999999999999999999999999998765432111 11233
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 683 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 683 (710)
..+.+||+.....++.++|||||||++|||+||+.|+........ .. .......+. .. .. .....+.+++.+
T Consensus 162 ~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~--~~-~~~~~~~~~-~~--~~--~~~~~~~~~l~~ 233 (274)
T cd06609 162 PFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV--LF-LIPKNNPPS-LE--GN--KFSKPFKDFVSL 233 (274)
T ss_pred ccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH--HH-HhhhcCCCC-Cc--cc--ccCHHHHHHHHH
Confidence 346788888877899999999999999999999999864321110 00 000000000 00 00 023456788999
Q ss_pred cCCCCCCCCCCHHHHHHH
Q 005177 684 CTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 684 Cl~~~p~~RPs~~evl~~ 701 (710)
|+..+|++|||+++++++
T Consensus 234 ~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 234 CLNKDPKERPSAKELLKH 251 (274)
T ss_pred HhhCChhhCcCHHHHhhC
Confidence 999999999999999864
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-33 Score=287.56 Aligned_cols=245 Identities=18% Similarity=0.211 Sum_probs=185.6
Q ss_pred hhhhhcCCCCCccEEEEcCC--CcEEEEEEeeccc-----------hhHHHHHHHHHHHh-ccCCCCceeEEEEEEcCCc
Q 005177 450 ECEEAARPQSAAGCKAVLPT--GITVSVKKIEWGA-----------TRIKIVSEFITRIG-TVRHKNLIRLLGFCYNRHQ 515 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~--g~~vAvK~l~~~~-----------~~~~~~~~e~~~l~-~l~H~niv~l~g~~~~~~~ 515 (710)
..+.||+|+||.||+|.... ++.+|||.+.... .....+..|++++. .++||||+++++++.+++.
T Consensus 4 ~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~ 83 (269)
T cd08528 4 VLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDR 83 (269)
T ss_pred hhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCe
Confidence 67889999999999999744 7899999886321 12344566777776 4799999999999999999
Q ss_pred eeEEEeecCCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcc
Q 005177 516 AYLLYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK 589 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla 589 (710)
.++||||+++++|.+++.. ..++..+++++.|++.|+.|||+.. +|+||||||+||+++.++.+||+|||++
T Consensus 84 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~nil~~~~~~~~l~dfg~~ 161 (269)
T cd08528 84 LYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNIMLGEDDKVTITDFGLA 161 (269)
T ss_pred EEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHEEECCCCcEEEecccce
Confidence 9999999999999988742 4577888999999999999999631 7999999999999999999999999998
Q ss_pred ccccccCC-CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCc
Q 005177 590 YLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 668 (710)
Q Consensus 590 ~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (710)
........ ....+...+.+||......++.++|||||||++|||++|+.|+....... ......+........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~ 235 (269)
T cd08528 162 KQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLS------LATKIVEAVYEPLPE 235 (269)
T ss_pred eecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHH------HHHHHhhccCCcCCc
Confidence 76543211 11112233667888877778999999999999999999999876332110 000111111000000
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhc
Q 005177 669 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 704 (710)
Q Consensus 669 ~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~ 704 (710)
......+.+++.+|++.||++||++.|+..++++
T Consensus 236 --~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 236 --GMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred --ccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 0123456788899999999999999999998863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-33 Score=296.28 Aligned_cols=187 Identities=21% Similarity=0.272 Sum_probs=150.9
Q ss_pred hhhhcCCCCCccEEEEcC---CCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEc--CCceeEEEeecCC
Q 005177 451 CEEAARPQSAAGCKAVLP---TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQAYLLYDYLPN 525 (710)
Q Consensus 451 ~~~ig~g~~g~vy~~~~~---~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~lv~Ey~~~ 525 (710)
...+|+|+||.||+|... +++.||+|.++.... ...+.+|++++++++|||||++++++.. +...++||||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~- 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE- 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-
Confidence 468999999999999853 568999999975432 3456789999999999999999999865 456899999996
Q ss_pred CChhhhhhc-----------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe----cCCCceEEcccCccc
Q 005177 526 GNLSEKIRT-----------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF----DENMEPHLAEFGFKY 590 (710)
Q Consensus 526 gsL~~~l~~-----------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl----~~~~~~kl~DfGla~ 590 (710)
++|.+++.. .+++.....++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07868 84 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence 588887642 356777889999999999999998 99999999999999 456789999999997
Q ss_pred cccccCC-----CCcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCC
Q 005177 591 LTQLADG-----SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNA 642 (710)
Q Consensus 591 ~~~~~~~-----~~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~ 642 (710)
....... ....++.+|.+||+..+ ..++.++||||+||++|||+||+.||..
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred ccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 6532211 11123445778887765 4578899999999999999999999863
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=290.78 Aligned_cols=247 Identities=20% Similarity=0.250 Sum_probs=183.4
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.||+|++|.||+|.. .+|..||||+++.... ..+.+.+|+.++.+++||||+++++++.+++..++||||++
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~- 82 (285)
T cd07861 4 KIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS- 82 (285)
T ss_pred EeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-
Confidence 567899999999999986 5789999999875322 24567889999999999999999999999999999999998
Q ss_pred CChhhhhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC-
Q 005177 526 GNLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF- 599 (710)
Q Consensus 526 gsL~~~l~~-----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~- 599 (710)
|+|.+++.. .+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 83 ~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (285)
T cd07861 83 MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYT 159 (285)
T ss_pred CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCccccc
Confidence 688888753 467888999999999999999998 99999999999999999999999999987543221111
Q ss_pred -cccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc---------------cccccccccccccc
Q 005177 600 -PAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPIDGLLGEMYNEN 662 (710)
Q Consensus 600 -~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~---------------~~~~~~~~~~~~~~ 662 (710)
......+.+||.... ..++.++|||||||++|||+||+.|+.+...... |.............
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (285)
T cd07861 160 HEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTF 239 (285)
T ss_pred CCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhc
Confidence 112344667786643 4568899999999999999999988864321100 00000000000000
Q ss_pred ccCCCcc----hHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 663 EVGSSSS----LQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 663 ~~~~~~~----~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
....... ......++.+++.+|++.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 240 PKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred cccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000000 0112345678999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-33 Score=296.78 Aligned_cols=248 Identities=17% Similarity=0.147 Sum_probs=203.3
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccC-CCCceeEEEEEEcCCce
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQA 516 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~ 516 (710)
.+.|. ..+++|+|.||.||+++. .+|+.+|+|.+.+... ....+.+|+++|+++. |||||.++++|.+.+..
T Consensus 34 ~~~Y~--l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~ 111 (382)
T KOG0032|consen 34 KEKYE--LGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSV 111 (382)
T ss_pred cccEE--ehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeE
Confidence 33455 668999999999999996 4599999999987533 3468899999999999 99999999999999999
Q ss_pred eEEEeecCCCChhhhhhcC-CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC----CceEEcccCcccc
Q 005177 517 YLLYDYLPNGNLSEKIRTK-RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN----MEPHLAEFGFKYL 591 (710)
Q Consensus 517 ~lv~Ey~~~gsL~~~l~~~-~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~----~~~kl~DfGla~~ 591 (710)
++|||++.||.|++.+... .+......++.|++.|+.|||+. +|+|||+||+|+|+... +.+|++|||+++.
T Consensus 112 ~lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~ 188 (382)
T KOG0032|consen 112 YLVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKF 188 (382)
T ss_pred EEEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCCceE
Confidence 9999999999999999876 78888899999999999999998 99999999999999743 4799999999987
Q ss_pred cccc-CCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcch
Q 005177 592 TQLA-DGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 670 (710)
Q Consensus 592 ~~~~-~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (710)
.... ......++++|.+||......++..+||||.||++|.|++|..||.+...... ...+....+....+.+
T Consensus 189 ~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~------~~~i~~~~~~f~~~~w 262 (382)
T KOG0032|consen 189 IKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEI------FLAILRGDFDFTSEPW 262 (382)
T ss_pred ccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHH------HHHHHcCCCCCCCCCc
Confidence 7541 11233467778889998888999999999999999999999999986543221 1122222212223445
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 671 QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 671 ~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
......+-+++..++..||.+|+|+.+++++
T Consensus 263 ~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 263 DDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred cccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 5556677789999999999999999999885
|
|
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-33 Score=289.55 Aligned_cols=242 Identities=18% Similarity=0.197 Sum_probs=186.6
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
..+.+|+|++|.||++.. .++..||+|.++.... ..+.+.+|++++++++||||+++++++.+++..++||||+++|+
T Consensus 9 i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 88 (280)
T cd06611 9 IIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGA 88 (280)
T ss_pred HHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCc
Confidence 778899999999999986 5789999999976432 35678889999999999999999999999999999999999999
Q ss_pred hhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Cccc
Q 005177 528 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAK 602 (710)
Q Consensus 528 L~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~~ 602 (710)
|.+++.. .+++.....++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++......... ...+
T Consensus 89 L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 165 (280)
T cd06611 89 LDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIG 165 (280)
T ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhcccccccceeec
Confidence 9999864 468889999999999999999998 9999999999999999999999999987654321111 1112
Q ss_pred ccccCchhhhh-----ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 603 IAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 603 ~~~~~~~e~~~-----~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
...+.+||... ...++.++|||||||++|||++|+.|+........ ...+....... ..........+
T Consensus 166 ~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~------~~~~~~~~~~~-~~~~~~~~~~~ 238 (280)
T cd06611 166 TPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRV------LLKILKSEPPT-LDQPSKWSSSF 238 (280)
T ss_pred chhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHH------HHHHhcCCCCC-cCCcccCCHHH
Confidence 33356677653 34467789999999999999999999864321110 01111110000 00011122456
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 678 LDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+++.+|++.+|++||++.++++.
T Consensus 239 ~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 239 NDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred HHHHHHHhccChhhCcCHHHHhcC
Confidence 788899999999999999999875
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-33 Score=285.68 Aligned_cols=243 Identities=17% Similarity=0.210 Sum_probs=189.3
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
..+.+|+|++|.||+|.. .+++.+|+|.+..... ..+.+.+|++++++++||||+++++++..++..++||||+++++
T Consensus 7 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~ 86 (262)
T cd06613 7 LIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGS 86 (262)
T ss_pred EEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCc
Confidence 567899999999999986 5688999999986432 45778899999999999999999999999999999999999999
Q ss_pred hhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--CCccc
Q 005177 528 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAK 602 (710)
Q Consensus 528 L~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--~~~~~ 602 (710)
|.+++.. .++..+...++.|++.|++|||+. +|+|+||||+||++++++.+||+|||++........ ....+
T Consensus 87 l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 163 (262)
T cd06613 87 LQDIYQVTRGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIG 163 (262)
T ss_pred HHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhhhhccccccC
Confidence 9998854 567888899999999999999998 999999999999999999999999999875432211 11123
Q ss_pred ccccCchhhhhcc---CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHH
Q 005177 603 IAWTESGEFYNAM---KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 679 (710)
Q Consensus 603 ~~~~~~~e~~~~~---~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (710)
..++.+||..... .++.++|||||||++|||+||+.|+.+...... ..........+. . ..........+.+
T Consensus 164 ~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~--~~~~~~~~~~~~-~--~~~~~~~~~~~~~ 238 (262)
T cd06613 164 TPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA--LFLISKSNFPPP-K--LKDKEKWSPVFHD 238 (262)
T ss_pred CccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHhccCCCc-c--ccchhhhhHHHHH
Confidence 3346677877655 778899999999999999999999864321110 000000100111 0 1111223456788
Q ss_pred HHhhcCCCCCCCCCCHHHHHH
Q 005177 680 VALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 680 l~~~Cl~~~p~~RPs~~evl~ 700 (710)
++.+|+..+|.+|||+.|++.
T Consensus 239 li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 239 FIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred HHHHHcCCChhhCCCHHHHhc
Confidence 999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=298.59 Aligned_cols=191 Identities=16% Similarity=0.099 Sum_probs=160.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc----chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~----~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||++.. .+++.||||.+... ....+.+.+|+.++..++||||+++++++.+++..|+||||++
T Consensus 5 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 84 (331)
T cd05597 5 ILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYV 84 (331)
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCC
Confidence 668899999999999985 57899999999752 2234568889999999999999999999999999999999999
Q ss_pred CCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC---
Q 005177 525 NGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--- 598 (710)
Q Consensus 525 ~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--- 598 (710)
+|+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 85 g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 161 (331)
T cd05597 85 GGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSN 161 (331)
T ss_pred CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCcccc
Confidence 9999999864 467888889999999999999998 9999999999999999999999999998654322111
Q ss_pred CcccccccCchhhhhc-----cCCccccceeeHHHHHHHHHhCCCCCCCC
Q 005177 599 FPAKIAWTESGEFYNA-----MKEEMYMDVYGFGEIILEILTNGRLTNAG 643 (710)
Q Consensus 599 ~~~~~~~~~~~e~~~~-----~~~~~~~DVySfGvvl~Elltg~~p~~~~ 643 (710)
...+...|.+||.... ..++.++|||||||++|||++|+.|+...
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~ 211 (331)
T cd05597 162 VAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 211 (331)
T ss_pred ceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC
Confidence 1123444677787652 35678899999999999999999998743
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-33 Score=291.93 Aligned_cols=247 Identities=19% Similarity=0.211 Sum_probs=179.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhcc---CCCCceeEEEEEEc-----CCcee
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTV---RHKNLIRLLGFCYN-----RHQAY 517 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l---~H~niv~l~g~~~~-----~~~~~ 517 (710)
..+.||+|+||.||+|.. .+|+.||+|.++.... ....+.+|+++++++ +||||+++++++.. ....+
T Consensus 4 ~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~ 83 (288)
T cd07863 4 PVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVT 83 (288)
T ss_pred EeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEE
Confidence 567899999999999985 5789999999875321 123455666666554 79999999999865 24579
Q ss_pred EEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccc
Q 005177 518 LLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~ 593 (710)
+||||++ ++|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 84 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~ 159 (288)
T cd07863 84 LVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGLARIYS 159 (288)
T ss_pred EEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCcccccc
Confidence 9999998 588888864 367888999999999999999998 99999999999999999999999999987654
Q ss_pred ccCCCC-cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCC---------------ccccccc-cc
Q 005177 594 LADGSF-PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKPIDGL-LG 656 (710)
Q Consensus 594 ~~~~~~-~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~---------------~~~~~~~-~~ 656 (710)
...... ..+...+.+||......++.++||||+||++|||++|+.|+....... .|..... ..
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T cd07863 160 CQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPR 239 (288)
T ss_pred CcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccc
Confidence 222111 113344778888877788999999999999999999988875332110 0000000 00
Q ss_pred ccccccccCC-CcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 657 EMYNENEVGS-SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 657 ~~~~~~~~~~-~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
....+..... ....++....+.+++.+|++.||++|||+.|++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 240 GAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred cccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000000000 0000122345678999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=294.31 Aligned_cols=248 Identities=18% Similarity=0.241 Sum_probs=184.3
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.||+|+||.||+|.. .+++.||+|.++.... ....+.+|++++++++||||+++++++..++..++||||++ +
T Consensus 10 ~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~-~ 88 (301)
T cd07873 10 KLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-K 88 (301)
T ss_pred EeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc-c
Confidence 668899999999999986 5788999999875322 24457789999999999999999999999999999999997 5
Q ss_pred Chhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC--cc
Q 005177 527 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF--PA 601 (710)
Q Consensus 527 sL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~--~~ 601 (710)
+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++......... ..
T Consensus 89 ~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 165 (301)
T cd07873 89 DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEV 165 (301)
T ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccccc
Confidence 89888864 457888899999999999999998 99999999999999999999999999987543221111 11
Q ss_pred cccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc---------cccccccccccccc-----cC-
Q 005177 602 KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK---------PIDGLLGEMYNENE-----VG- 665 (710)
Q Consensus 602 ~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~---------~~~~~~~~~~~~~~-----~~- 665 (710)
....+.+||.... ..++.++|||||||++|||+||+.|+......... +.......+..... ..
T Consensus 166 ~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (301)
T cd07873 166 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPK 245 (301)
T ss_pred eeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCc
Confidence 2344667776543 45778899999999999999999988743211000 00000000000000 00
Q ss_pred C-Ccch----HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 666 S-SSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 666 ~-~~~~----~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
. .... ......+.+++.+|++.||.+|||+.|++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 246 YRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred cccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0 0000 0122356789999999999999999999873
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=293.89 Aligned_cols=243 Identities=20% Similarity=0.271 Sum_probs=191.5
Q ss_pred hhhhhcCCCCCccEEEEcC---CC--cEEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVLP---TG--ITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~---~g--~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
...+||.|.||.||+|+.. .| ..||||.-+.+ ....+.|..|..+|++++|||||+|+|+|.+ ...+||||.
T Consensus 393 l~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~WivmEL 471 (974)
T KOG4257|consen 393 LKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVMEL 471 (974)
T ss_pred HHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEEec
Confidence 5688999999999999852 33 46899988763 3347789999999999999999999999976 568999999
Q ss_pred cCCCChhhhhhcC---CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC-
Q 005177 523 LPNGNLSEKIRTK---RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 598 (710)
Q Consensus 523 ~~~gsL~~~l~~~---~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~- 598 (710)
++-|.|..+|... ++..+-..+++|++.||+|||+. ++|||||...|||+.+...+|++|||++|......-.
T Consensus 472 ~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYk 548 (974)
T KOG4257|consen 472 APLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYK 548 (974)
T ss_pred ccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhhccccchhh
Confidence 9999999999864 45566678999999999999999 9999999999999999999999999999987543211
Q ss_pred ---CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 599 ---FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 599 ---~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
....+.|++ ||-.+..++++++|||-|||.+||++. |..||.+-.+. +.+..+-+...++.++ ...
T Consensus 549 aS~~kLPIKWma-PESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNs------DVI~~iEnGeRlP~P~---nCP 618 (974)
T KOG4257|consen 549 ASRGKLPIKWMA-PESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNS------DVIGHIENGERLPCPP---NCP 618 (974)
T ss_pred ccccccceeecC-ccccchhcccchhhHHHHHHHHHHHHHhcCCcccccccc------ceEEEecCCCCCCCCC---CCC
Confidence 112466664 466777889999999999999999976 67787632221 1222222222222222 334
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
+.+..++.+||+.+|.+||.+.|+...|+++.
T Consensus 619 p~LYslmskcWayeP~kRPrftei~~~lsdv~ 650 (974)
T KOG4257|consen 619 PALYSLMSKCWAYEPSKRPRFTEIKAILSDVL 650 (974)
T ss_pred hHHHHHHHHHhccCcccCCcHHHHHHHHHHHH
Confidence 55668999999999999999999999887764
|
|
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-33 Score=296.16 Aligned_cols=245 Identities=22% Similarity=0.265 Sum_probs=188.5
Q ss_pred hhhhhcCCCCCccEEEEcC--------CCcEEEEEEeeccc--hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeE
Q 005177 450 ECEEAARPQSAAGCKAVLP--------TGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~--------~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 518 (710)
..+.||+|+||.||++... .+..||+|.++... ...+.+.+|++++.++ +||||++++++|.+++..++
T Consensus 16 i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 95 (334)
T cd05100 16 LGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 95 (334)
T ss_pred ecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEE
Confidence 6688999999999999631 23479999887532 2356788999999999 79999999999999999999
Q ss_pred EEeecCCCChhhhhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc
Q 005177 519 LYDYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~ 580 (710)
||||+++|+|.+++.. .++|.++..++.|+++||+|||.. +|+||||||+||+++.++.
T Consensus 96 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nill~~~~~ 172 (334)
T cd05100 96 LVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLVTEDNV 172 (334)
T ss_pred EEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCc
Confidence 9999999999999853 257888999999999999999998 9999999999999999999
Q ss_pred eEEcccCccccccccCCC--C--cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccc
Q 005177 581 PHLAEFGFKYLTQLADGS--F--PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLL 655 (710)
Q Consensus 581 ~kl~DfGla~~~~~~~~~--~--~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~ 655 (710)
+||+|||+++........ . ......|.+||......++.++|||||||++|||++ |+.|+.+.. ... ..
T Consensus 173 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-~~~-----~~ 246 (334)
T cd05100 173 MKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP-VEE-----LF 246 (334)
T ss_pred EEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC-HHH-----HH
Confidence 999999998764322111 0 111123667788777788899999999999999999 666664321 111 01
Q ss_pred cccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 656 GEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
..+........+ ......+.+++.+|++.+|++||+|.|+++.|+.+.
T Consensus 247 ~~~~~~~~~~~~---~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 247 KLLKEGHRMDKP---ANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred HHHHcCCCCCCC---CCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 111111100001 112345778999999999999999999999998775
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=301.50 Aligned_cols=254 Identities=19% Similarity=0.265 Sum_probs=187.7
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcC---
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--- 513 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--- 513 (710)
++.+.|. ..+.||+|+||.||+|.. .++..||||++.... ...+.+.+|++++++++|||||++++++...
T Consensus 12 ~~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07878 12 EVPERYQ--NLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSI 89 (343)
T ss_pred hhhhhhh--hheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccc
Confidence 3455566 778999999999999985 678899999997532 2345577899999999999999999988643
Q ss_pred ---CceeEEEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcc
Q 005177 514 ---HQAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK 589 (710)
Q Consensus 514 ---~~~~lv~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla 589 (710)
...+++|||+ +++|.+++.. .+++.....++.|+++||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 90 ~~~~~~~~~~~~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~ 165 (343)
T cd07878 90 ENFNEVYLVTNLM-GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLA 165 (343)
T ss_pred cccCcEEEEeecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCCccc
Confidence 3579999988 6899988864 578889999999999999999998 9999999999999999999999999998
Q ss_pred ccccccCCCCcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccc---------ccccccc--
Q 005177 590 YLTQLADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP---------IDGLLGE-- 657 (710)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~---------~~~~~~~-- 657 (710)
+......... .+..+|.+||+... ..++.++|||||||++|||++|+.|+.+........ .......
T Consensus 166 ~~~~~~~~~~-~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (343)
T cd07878 166 RQADDEMTGY-VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKIS 244 (343)
T ss_pred eecCCCcCCc-cccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcc
Confidence 7654322222 23445677887654 567889999999999999999999986432111000 0000000
Q ss_pred ------cccccccCCCcch----HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 658 ------MYNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 658 ------~~~~~~~~~~~~~----~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
............. ......+.+++.+|++.||++|||+.|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 245 SEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred hhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000000000 0112346789999999999999999999864
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=285.22 Aligned_cols=244 Identities=18% Similarity=0.223 Sum_probs=183.6
Q ss_pred hhhhhcCCCCCccEEEEc----CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcCC------ce
Q 005177 450 ECEEAARPQSAAGCKAVL----PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH------QA 516 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~----~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~------~~ 516 (710)
..+.||+|+||.||+|.. .+|..||||.+... ....+.+.+|++.+++++||||+++++++...+ ..
T Consensus 3 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 82 (273)
T cd05074 3 LGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIP 82 (273)
T ss_pred chhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccce
Confidence 567899999999999985 34789999998753 234566888999999999999999999986532 24
Q ss_pred eEEEeecCCCChhhhhhc--------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCc
Q 005177 517 YLLYDYLPNGNLSEKIRT--------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 588 (710)
Q Consensus 517 ~lv~Ey~~~gsL~~~l~~--------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl 588 (710)
++++||+++|+|.+++.. .+++....+++.|++.|++|||+. +|+||||||+||++++++.+|++|||+
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg~ 159 (273)
T cd05074 83 MVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADFGL 159 (273)
T ss_pred EEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcccc
Confidence 789999999999988742 356788899999999999999998 999999999999999999999999999
Q ss_pred cccccccCC----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccc
Q 005177 589 KYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENE 663 (710)
Q Consensus 589 a~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 663 (710)
++....... ........+.+||......++.++|||||||++|||++ |+.|+..... .. ....+.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~-~~-----~~~~~~~~~~ 233 (273)
T cd05074 160 SKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN-SE-----IYNYLIKGNR 233 (273)
T ss_pred cccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH-HH-----HHHHHHcCCc
Confidence 875432111 11111122455676666677889999999999999999 6666643221 11 0001111110
Q ss_pred cCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 664 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 664 ~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
..... .....+.+++.+|++.+|++||++.|+++.|+++
T Consensus 234 ~~~~~---~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 234 LKQPP---DCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11011 1235678899999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=278.42 Aligned_cols=243 Identities=15% Similarity=0.217 Sum_probs=197.1
Q ss_pred CCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 446 FNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 446 ~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
|+ ..+.+|+|+||.||||.+ .+|.+||||++.... ..+++.+||.++.+...|++|++||-|.....+++|||||-
T Consensus 35 FD--i~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s-DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 35 FD--IVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT-DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HH--HHHHhcCCcchHHHHHHHhccCcEEEEEecCccc-hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence 55 788999999999999986 789999999997543 45667789999999999999999999988889999999999
Q ss_pred CCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC--CCC
Q 005177 525 NGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--GSF 599 (710)
Q Consensus 525 ~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~--~~~ 599 (710)
.||+.|.++. .+...+...|....++||+|||.. .=||||||+.||||+.+|.+|++|||+|.-....- ...
T Consensus 112 AGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNT 188 (502)
T KOG0574|consen 112 AGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNT 188 (502)
T ss_pred CCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCc
Confidence 9999999864 567777888999999999999987 77999999999999999999999999986443211 112
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 679 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (710)
.-+++++.+||+...-.|++++||||+|+...||..|++|+.+-..... .+ ++...+.+....+.+...++-+
T Consensus 189 VIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRA-----IF--MIPT~PPPTF~KPE~WS~~F~D 261 (502)
T KOG0574|consen 189 VIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRA-----IF--MIPTKPPPTFKKPEEWSSEFND 261 (502)
T ss_pred cccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccce-----eE--eccCCCCCCCCChHhhhhHHHH
Confidence 2256667788888888899999999999999999999999874332211 11 1111112222334556678889
Q ss_pred HHhhcCCCCCCCCCCHHHHHHH
Q 005177 680 VALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 680 l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
++..|+...|++|-|+.+++++
T Consensus 262 Fi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 262 FIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred HHHHHhcCCHHHHHHHHHHhhh
Confidence 9999999999999999988765
|
|
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=302.81 Aligned_cols=185 Identities=17% Similarity=0.120 Sum_probs=155.3
Q ss_pred chhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 448 STECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 448 ~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
+...+.||+|+||.||+|.. .++..||+|..... ....|+.++++++|||||++++++.+++..++||||+. |
T Consensus 68 y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 141 (357)
T PHA03209 68 YTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS-S 141 (357)
T ss_pred cEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-C
Confidence 33788999999999999986 46789999975432 23468899999999999999999999999999999995 6
Q ss_pred Chhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-CCccc
Q 005177 527 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SFPAK 602 (710)
Q Consensus 527 sL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-~~~~~ 602 (710)
+|.+++.. .++|..+.+|+.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++....... ....+
T Consensus 142 ~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~g 218 (357)
T PHA03209 142 DLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLAG 218 (357)
T ss_pred cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccccCcccccccc
Confidence 89888854 468999999999999999999998 999999999999999999999999999875332111 11123
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCC
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTN 641 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~ 641 (710)
...+.+||+.....++.++|||||||++|||+++..++.
T Consensus 219 t~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f 257 (357)
T PHA03209 219 TVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIF 257 (357)
T ss_pred cccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccc
Confidence 444677888877788999999999999999999877765
|
|
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=298.13 Aligned_cols=243 Identities=16% Similarity=0.097 Sum_probs=182.6
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||++.. .+++.||+|.+.... .....+.+|+.++..++|+||+++++++.+++..|+||||++
T Consensus 5 i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~ 84 (331)
T cd05624 5 IIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYV 84 (331)
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCC
Confidence 668899999999999985 578899999997532 234557888999999999999999999999999999999999
Q ss_pred CCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC---
Q 005177 525 NGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--- 598 (710)
Q Consensus 525 ~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--- 598 (710)
+|+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 85 gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 161 (331)
T cd05624 85 GGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSS 161 (331)
T ss_pred CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceeec
Confidence 9999999964 467888889999999999999998 9999999999999999999999999998765322111
Q ss_pred CcccccccCchhhhhc-----cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccccc-ccCCCcchHH
Q 005177 599 FPAKIAWTESGEFYNA-----MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN-EVGSSSSLQD 672 (710)
Q Consensus 599 ~~~~~~~~~~~e~~~~-----~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 672 (710)
...+...|.+||+... ..++.++|||||||++|||+||+.|+........ ...+.... ....+....+
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~------~~~i~~~~~~~~~p~~~~~ 235 (331)
T cd05624 162 VAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET------YGKIMNHEERFQFPSHITD 235 (331)
T ss_pred cccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHH------HHHHHcCCCcccCCCcccc
Confidence 1123344677887654 3577889999999999999999999874332110 11111100 0111111112
Q ss_pred HHHHHHHHHhhcCCCCCCC--CCCHHHHHHH
Q 005177 673 EIKLVLDVALLCTRSTPSD--RPSMEEALKL 701 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~--RPs~~evl~~ 701 (710)
....+.+++.+|+..++++ |++++++.++
T Consensus 236 ~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 236 VSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred CCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 2345667777777765544 5688888654
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=297.54 Aligned_cols=243 Identities=16% Similarity=0.086 Sum_probs=181.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||++.. .+++.+|+|.+.... .....+.+|+.++..++|+||+++++++.+++..++||||++
T Consensus 5 ~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~ 84 (332)
T cd05623 5 ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYV 84 (332)
T ss_pred EEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccC
Confidence 668899999999999986 567899999997522 224457889999999999999999999999999999999999
Q ss_pred CCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC---
Q 005177 525 NGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--- 598 (710)
Q Consensus 525 ~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--- 598 (710)
+|+|.++++. .+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 85 ~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~ 161 (332)
T cd05623 85 GGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSS 161 (332)
T ss_pred CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheecccCCcceec
Confidence 9999999965 467888899999999999999998 9999999999999999999999999998654221111
Q ss_pred CcccccccCchhhhh-----ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccc-cCCCcchHH
Q 005177 599 FPAKIAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENE-VGSSSSLQD 672 (710)
Q Consensus 599 ~~~~~~~~~~~e~~~-----~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 672 (710)
...++..|.+||+.. ...++.++|||||||++|||++|+.||........ ...+..... ...+.....
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~------~~~i~~~~~~~~~p~~~~~ 235 (332)
T cd05623 162 VAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET------YGKIMNHKERFQFPAQVTD 235 (332)
T ss_pred ccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHH------HHHHhCCCccccCCCcccc
Confidence 112344567788765 34578899999999999999999999874432111 011111000 000111112
Q ss_pred HHHHHHHHHhhcCCC--CCCCCCCHHHHHHH
Q 005177 673 EIKLVLDVALLCTRS--TPSDRPSMEEALKL 701 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~--~p~~RPs~~evl~~ 701 (710)
....+.+++.+|+.. ++..||+++|++++
T Consensus 236 ~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 236 VSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred CCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 233455666666644 44447899998765
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-33 Score=285.43 Aligned_cols=240 Identities=19% Similarity=0.238 Sum_probs=186.8
Q ss_pred hhhhhcCCCCCccEEEEcC-CCcEEEEEEeeccc------hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA------TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~-~g~~vAvK~l~~~~------~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
..+.||+|++|.||+|+.. ++..||+|.+.... ...+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 4 ~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 83 (258)
T cd06632 4 KGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLEL 83 (258)
T ss_pred ccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEe
Confidence 5678999999999999875 89999999987532 2356788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC-CCC
Q 005177 523 LPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD-GSF 599 (710)
Q Consensus 523 ~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~-~~~ 599 (710)
+++++|.+++.. ..++.....++.|+++|++|||+. +|+|+||||+||+++.++.+||+|||++....... ...
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~ 160 (258)
T cd06632 84 VPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKS 160 (258)
T ss_pred cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceeccccccccc
Confidence 999999999965 367888999999999999999998 99999999999999999999999999987643221 111
Q ss_pred cccccccCchhhhhccC-CccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAMK-EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 678 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~-~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (710)
..+...+.+||...... ++.++|||||||++|||++|+.|+........ .. ......... .........+.
T Consensus 161 ~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~-~~-----~~~~~~~~~--~~~~~~~~~~~ 232 (258)
T cd06632 161 FKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAA-VF-----KIGRSKELP--PIPDHLSDEAK 232 (258)
T ss_pred cCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHH-HH-----HHHhcccCC--CcCCCcCHHHH
Confidence 11233356677665554 88899999999999999999999864331110 00 000000000 00111234566
Q ss_pred HHHhhcCCCCCCCCCCHHHHHH
Q 005177 679 DVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 679 ~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
+++.+|++.+|++||++.|++.
T Consensus 233 ~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 233 DFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred HHHHHHhhcCcccCcCHHHHhc
Confidence 8889999999999999999975
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=300.81 Aligned_cols=191 Identities=21% Similarity=0.269 Sum_probs=165.0
Q ss_pred CchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccC-CC-----CceeEEEEEEcCCceeEE
Q 005177 447 NSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR-HK-----NLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 447 ~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~-H~-----niv~l~g~~~~~~~~~lv 519 (710)
.|...+.||+|.||.|.||.. .+++.||||.++....-..+...|+++|..++ |. |+|++++||..+++.|||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciV 266 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIV 266 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeee
Confidence 445889999999999999984 77999999999987766777888999999998 43 899999999999999999
Q ss_pred EeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC--CceEEcccCcccccc
Q 005177 520 YDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN--MEPHLAEFGFKYLTQ 593 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~--~~~kl~DfGla~~~~ 593 (710)
+|.+. -+|+++|+. .++......++.||+.||.+||+. +|||+||||+||||.+- ..+||+|||.+....
T Consensus 267 fELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~ 342 (586)
T KOG0667|consen 267 FELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSSCFES 342 (586)
T ss_pred ehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEecccccccC
Confidence 99886 499999986 567888899999999999999998 99999999999999754 479999999987654
Q ss_pred ccCCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCC
Q 005177 594 LADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNA 642 (710)
Q Consensus 594 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~ 642 (710)
...- .-....+|.+||++.+.+|+.+.||||||||++||+||.+.|.+
T Consensus 343 q~vy-tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG 390 (586)
T KOG0667|consen 343 QRVY-TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPG 390 (586)
T ss_pred Ccce-eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCC
Confidence 3221 11145679999999999999999999999999999999665553
|
|
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-33 Score=287.18 Aligned_cols=246 Identities=21% Similarity=0.235 Sum_probs=190.7
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.||+|++|.||++.. .+++.||+|++.... ...+.+.+|++.+++++||||+++++++..++..++||||++++
T Consensus 5 ~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (265)
T cd06605 5 YLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGG 84 (265)
T ss_pred HHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCC
Confidence 668899999999999986 478999999998653 34567888999999999999999999999999999999999999
Q ss_pred Chhhhhhc---CCCHHHHHHHHHHHHHHHHHHhc-CCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCccc
Q 005177 527 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHH-DCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK 602 (710)
Q Consensus 527 sL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~ 602 (710)
+|.+++.. ..+.....+++.|+++|++|||+ . +++||||||+||+++.++.+||+|||.+............+
T Consensus 85 ~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 161 (265)
T cd06605 85 SLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVG 161 (265)
T ss_pred cHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcccC
Confidence 99999974 45778888999999999999999 7 99999999999999999999999999986543211111122
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
...+.+||+.....++.++|||||||++|||++|+.|+........... ..............+. ......+.+++.
T Consensus 162 ~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~li~ 238 (265)
T cd06605 162 TSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIF-ELLQYIVNEPPPRLPS--GKFSPDFQDFVN 238 (265)
T ss_pred ChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHH-HHHHHHhcCCCCCCCh--hhcCHHHHHHHH
Confidence 2335677888777889999999999999999999999874421111110 1111111111011011 113455778899
Q ss_pred hcCCCCCCCCCCHHHHHHH
Q 005177 683 LCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 683 ~Cl~~~p~~RPs~~evl~~ 701 (710)
+|+..+|++|||+.|++.+
T Consensus 239 ~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 239 LCLIKDPRERPSYKELLEH 257 (265)
T ss_pred HHcCCCchhCcCHHHHhhC
Confidence 9999999999999999763
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-33 Score=287.24 Aligned_cols=239 Identities=18% Similarity=0.251 Sum_probs=186.3
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----------hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----------RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----------~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
....||+|++|.||+|.. .+++.||+|.+..... ..+.+.+|++++++++||||+++++++.+.+..++
T Consensus 4 ~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (267)
T cd06628 4 KGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLNI 83 (267)
T ss_pred ccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEE
Confidence 457899999999999985 5688999998865321 13567889999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC
Q 005177 519 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 596 (710)
||||+++++|.+++.. .+++.....++.|++.|++|||+. +++||||||+||++++++.+||+|||+++......
T Consensus 84 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06628 84 FLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISKKLEANS 160 (267)
T ss_pred EEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCccccccc
Confidence 9999999999999965 467888899999999999999998 99999999999999999999999999987654211
Q ss_pred CC--------CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCc
Q 005177 597 GS--------FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 668 (710)
Q Consensus 597 ~~--------~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (710)
.. ...+...+.+||......++.++||||+||++|||+||+.|+........ . .+..... . +.
T Consensus 161 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~----~~~~~~~-~--~~ 231 (267)
T cd06628 161 LSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA--I----FKIGENA-S--PE 231 (267)
T ss_pred ccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH--H----HHHhccC-C--Cc
Confidence 00 01122336677877777788899999999999999999999874322110 0 0100000 0 00
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 669 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 669 ~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
........+.+++.+||+.||.+||++.|+++
T Consensus 232 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 232 IPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred CCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 11122345678889999999999999999976
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=299.36 Aligned_cols=235 Identities=14% Similarity=0.054 Sum_probs=174.6
Q ss_pred hcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhcc---CCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 454 AARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTV---RHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 454 ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l---~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
||+|+||.||+|.. .+|+.||||++..... ....+..|..++.+. +||||+++++++.+++..|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 69999999999985 5789999999975321 122344455565544 699999999999999999999999999
Q ss_pred CChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Ccc
Q 005177 526 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPA 601 (710)
Q Consensus 526 gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~ 601 (710)
|+|.+++.. .+++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++........ ...
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 157 (330)
T cd05586 81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFC 157 (330)
T ss_pred ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCcc
Confidence 999998865 467888899999999999999998 9999999999999999999999999998753221111 112
Q ss_pred cccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHH
Q 005177 602 KIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 680 (710)
Q Consensus 602 ~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 680 (710)
+...|.+||..... .++.++||||+||++|||+||+.|+....... ....+.... ...+.. .....+.++
T Consensus 158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~------~~~~i~~~~-~~~~~~--~~~~~~~~l 228 (330)
T cd05586 158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQ------MYRNIAFGK-VRFPKN--VLSDEGRQF 228 (330)
T ss_pred CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHH------HHHHHHcCC-CCCCCc--cCCHHHHHH
Confidence 33446777876543 47889999999999999999999986432111 001111111 000100 112355688
Q ss_pred HhhcCCCCCCCCCC----HHHHHH
Q 005177 681 ALLCTRSTPSDRPS----MEEALK 700 (710)
Q Consensus 681 ~~~Cl~~~p~~RPs----~~evl~ 700 (710)
+.+|++.||++||+ +.|+++
T Consensus 229 i~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 229 VKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred HHHHcCCCHHHCCCCCCCHHHHhc
Confidence 89999999999984 566554
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-33 Score=285.83 Aligned_cols=240 Identities=16% Similarity=0.198 Sum_probs=189.4
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.+|+|+||.+|++.. .+|+.||+|++... ....+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 4 ~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd08218 4 KVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEG 83 (256)
T ss_pred EEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCC
Confidence 678899999999999985 57899999999753 23356788999999999999999999999999999999999999
Q ss_pred CChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--C
Q 005177 526 GNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--F 599 (710)
Q Consensus 526 gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~ 599 (710)
++|.+++.. ..++.+..+++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++......... .
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~ 160 (256)
T cd08218 84 GDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELART 160 (256)
T ss_pred CcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhh
Confidence 999998864 357888899999999999999998 9999999999999999999999999998765322111 1
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 679 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (710)
..+...+.+||+......+.++|||||||+++||+||+.|+..+... . ...++.... . +.........+.+
T Consensus 161 ~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~-~-----~~~~~~~~~-~--~~~~~~~~~~~~~ 231 (256)
T cd08218 161 CIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK-N-----LVLKIIRGS-Y--PPVSSHYSYDLRN 231 (256)
T ss_pred ccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH-H-----HHHHHhcCC-C--CCCcccCCHHHHH
Confidence 11223366788887778889999999999999999999988643211 0 011111111 0 0111122345778
Q ss_pred HHhhcCCCCCCCCCCHHHHHHH
Q 005177 680 VALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 680 l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
++.+|++.+|++||+|.||+++
T Consensus 232 li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 232 LVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred HHHHHhhCChhhCcCHHHHhhC
Confidence 9999999999999999999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=305.43 Aligned_cols=243 Identities=16% Similarity=0.118 Sum_probs=184.4
Q ss_pred hhhhhcCCCCCccEEEEc---CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVL---PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~---~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
....||+|+||.||++.. ..+..||||.+... +...+|++++++++|||||++++++..++..++||||+. +
T Consensus 96 i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 170 (392)
T PHA03207 96 ILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK-C 170 (392)
T ss_pred EEEeecCCCCeEEEEEEEcCCccceeEEEEecccc----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-C
Confidence 778899999999999974 35678999998743 345679999999999999999999999999999999996 6
Q ss_pred Chhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC----Cc
Q 005177 527 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS----FP 600 (710)
Q Consensus 527 sL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~----~~ 600 (710)
+|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........ ..
T Consensus 171 ~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~ 247 (392)
T PHA03207 171 DLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGW 247 (392)
T ss_pred CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccccCccccccccccc
Confidence 88888854 578999999999999999999998 9999999999999999999999999998754322111 11
Q ss_pred ccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc-ccccc----------------------ccc
Q 005177 601 AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK-PIDGL----------------------LGE 657 (710)
Q Consensus 601 ~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~-~~~~~----------------------~~~ 657 (710)
.++..|.+||+.....++.++|||||||++|||++|+.|+.+....... ..... ..+
T Consensus 248 ~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (392)
T PHA03207 248 SGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQ 327 (392)
T ss_pred ccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHh
Confidence 2344567889888888899999999999999999999998753321100 00000 000
Q ss_pred c---ccccccCCCcchH--HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 658 M---YNENEVGSSSSLQ--DEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 658 ~---~~~~~~~~~~~~~--~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
. ..+. ...+.... .....+.+++.+|+..||++|||+.|++.+
T Consensus 328 ~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 328 YAIVLRPP-YTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred hcccccCC-ccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0 0000 00000000 012345678889999999999999999875
|
|
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=322.28 Aligned_cols=246 Identities=17% Similarity=0.199 Sum_probs=186.4
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEc--CCcee
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQAY 517 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~ 517 (710)
..|. ....||+|+||.||++.. .++..||+|.+... ......+..|+.++.+++|||||+++++|.+ .+..|
T Consensus 13 ~~Ye--Il~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly 90 (1021)
T PTZ00266 13 NEYE--VIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY 90 (1021)
T ss_pred CCEE--EEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence 4455 778999999999999985 56789999998753 2235678889999999999999999998865 35689
Q ss_pred EEEeecCCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCC----CCceecCCCCCCeEecCC---------
Q 005177 518 LLYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCY----PAIPHGDLKASNIVFDEN--------- 578 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~----~~iiHrDlk~~NiLl~~~--------- 578 (710)
+||||+++|+|.++|.. .+++...+.|+.||+.||+|||+... .+||||||||+|||++.+
T Consensus 91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~ 170 (1021)
T PTZ00266 91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITA 170 (1021)
T ss_pred EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccc
Confidence 99999999999999864 47888999999999999999998531 369999999999999642
Q ss_pred --------CceEEcccCccccccccCC-CCcccccccCchhhhhc--cCCccccceeeHHHHHHHHHhCCCCCCCCCCCC
Q 005177 579 --------MEPHLAEFGFKYLTQLADG-SFPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ 647 (710)
Q Consensus 579 --------~~~kl~DfGla~~~~~~~~-~~~~~~~~~~~~e~~~~--~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~ 647 (710)
..+||+|||+++....... ....++..|.+||+... ..++.++||||||||+|||+||+.||.......
T Consensus 171 ~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~ 250 (1021)
T PTZ00266 171 QANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFS 250 (1021)
T ss_pred cccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHH
Confidence 3489999999876532211 11124445778887643 457889999999999999999999987443221
Q ss_pred cccccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 648 NKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
. ....+....... . ......+.+++..||+.+|.+||++.|++.
T Consensus 251 q-----li~~lk~~p~lp-i---~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 251 Q-----LISELKRGPDLP-I---KGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred H-----HHHHHhcCCCCC-c---CCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 1 111111111011 0 112345778999999999999999999984
|
|
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-33 Score=294.37 Aligned_cols=187 Identities=21% Similarity=0.273 Sum_probs=150.4
Q ss_pred hhhhcCCCCCccEEEEcC---CCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEc--CCceeEEEeecCC
Q 005177 451 CEEAARPQSAAGCKAVLP---TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQAYLLYDYLPN 525 (710)
Q Consensus 451 ~~~ig~g~~g~vy~~~~~---~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~lv~Ey~~~ 525 (710)
...||+|+||.||+|... ++..||+|.++... ....+.+|++++++++|||||++++++.. +...++||||+++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH 84 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence 357999999999999853 45789999987543 23457789999999999999999999854 4578999999974
Q ss_pred CChhhhhhc-----------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe----cCCCceEEcccCccc
Q 005177 526 GNLSEKIRT-----------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF----DENMEPHLAEFGFKY 590 (710)
Q Consensus 526 gsL~~~l~~-----------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl----~~~~~~kl~DfGla~ 590 (710)
+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 77777642 356778889999999999999998 99999999999999 566789999999998
Q ss_pred cccccCCC-----CcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCC
Q 005177 591 LTQLADGS-----FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNA 642 (710)
Q Consensus 591 ~~~~~~~~-----~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~ 642 (710)
........ ...+...|.+||.... ..++.++|||||||++|||+||+.||..
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred ccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 65322111 1123445677887655 4578899999999999999999998863
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-33 Score=287.34 Aligned_cols=240 Identities=19% Similarity=0.233 Sum_probs=189.7
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.||+|+||.||+|.. .++..||||.+.... ...+.+.+|++.+++++||||+++++++..++..++||||+++|
T Consensus 8 ~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 87 (277)
T cd06641 8 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGG 87 (277)
T ss_pred hheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCC
Confidence 667899999999999985 678999999986432 23567889999999999999999999999999999999999999
Q ss_pred Chhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Ccccc
Q 005177 527 NLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAKI 603 (710)
Q Consensus 527 sL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~~~ 603 (710)
+|.+++.. ..++.....++.|++.|++|||+. +++|+||||+||+++.++.++++|||+++........ ...+.
T Consensus 88 ~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 164 (277)
T cd06641 88 SALDLLEPGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGT 164 (277)
T ss_pred cHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccchhhhccccCC
Confidence 99999875 568999999999999999999998 9999999999999999999999999998754322111 11234
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 683 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 683 (710)
.++.+||.......+.++|||||||++|||++|+.|+....... ....+.... . +.........+.+++.+
T Consensus 165 ~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~-~--~~~~~~~~~~~~~~i~~ 235 (277)
T cd06641 165 PFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK------VLFLIPKNN-P--PTLEGNYSKPLKEFVEA 235 (277)
T ss_pred ccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH------HHHHHhcCC-C--CCCCcccCHHHHHHHHH
Confidence 45678888777778889999999999999999999876322110 000010000 0 00011123456788999
Q ss_pred cCCCCCCCCCCHHHHHHH
Q 005177 684 CTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 684 Cl~~~p~~RPs~~evl~~ 701 (710)
|++.+|++||+|.|++++
T Consensus 236 ~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 236 CLNKEPSFRPTAKELLKH 253 (277)
T ss_pred HccCChhhCcCHHHHHhC
Confidence 999999999999999874
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=292.11 Aligned_cols=247 Identities=19% Similarity=0.251 Sum_probs=184.7
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.+|+|++|.||+|.. .+|+.||+|+++.... ..+.+.+|++++++++||||+++++++.+.+..++|+||++
T Consensus 4 ~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~- 82 (284)
T cd07839 4 KLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCD- 82 (284)
T ss_pred eEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCC-
Confidence 557899999999999986 5799999999975322 23567789999999999999999999999999999999997
Q ss_pred CChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCc--
Q 005177 526 GNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFP-- 600 (710)
Q Consensus 526 gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~-- 600 (710)
++|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 83 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 159 (284)
T cd07839 83 QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAE 159 (284)
T ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCC
Confidence 588887753 468899999999999999999998 999999999999999999999999999875432211111
Q ss_pred ccccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc----------c---ccccccccccc--
Q 005177 601 AKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID----------G---LLGEMYNENEV-- 664 (710)
Q Consensus 601 ~~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~----------~---~~~~~~~~~~~-- 664 (710)
.....+.+||...+. .++.++|||||||++|||+||+.|+..+......... . ...+..+....
T Consensus 160 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd07839 160 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPM 239 (284)
T ss_pred ccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCC
Confidence 123446778876553 4688999999999999999999997643321110000 0 00000000000
Q ss_pred -CCCc----chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 665 -GSSS----SLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 665 -~~~~----~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
.... ........+.+++.+|++.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 240 YPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred CCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 0000 01112356778999999999999999999976
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=287.60 Aligned_cols=249 Identities=18% Similarity=0.248 Sum_probs=195.3
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEEcC-CCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
+..+.|. ..+.+|+|++|.||+|... ++..||+|.+.......+.+.+|++.+++++|+||+++++++...+..++|
T Consensus 16 ~~~~~~~--~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 93 (286)
T cd06614 16 DPRELYK--NLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVV 93 (286)
T ss_pred Cccccch--HhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEE
Confidence 3445566 7789999999999999975 789999999986554566788999999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC
Q 005177 520 YDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 596 (710)
|||+++++|.+++.. .+++..+..++.|++.||+|||+. +|+|+||||+||+++.++.++|+|||++.......
T Consensus 94 ~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 170 (286)
T cd06614 94 MEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK 170 (286)
T ss_pred EeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhccch
Confidence 999999999999976 468999999999999999999998 99999999999999999999999999876543221
Q ss_pred CC--CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 597 GS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 597 ~~--~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
.. ...+...+.+||......++.++|||||||++|||++|+.|+......... ....... ...........
T Consensus 171 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~ 243 (286)
T cd06614 171 SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRAL------FLITTKG-IPPLKNPEKWS 243 (286)
T ss_pred hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHH------HHHHhcC-CCCCcchhhCC
Confidence 11 111233467788877777889999999999999999999997643221100 0000000 00011111123
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..+.+++.+|++.+|.+||++.+++++
T Consensus 244 ~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 244 PEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 457788999999999999999999864
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-33 Score=283.47 Aligned_cols=240 Identities=15% Similarity=0.168 Sum_probs=187.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcC-CceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR-HQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-~~~~lv~Ey~~ 524 (710)
..+.+|+|++|.||++.. .+++.||+|++.... ...+.+.+|++++++++|||++++++.+... ...++||||++
T Consensus 4 ~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~ 83 (257)
T cd08223 4 FVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCE 83 (257)
T ss_pred EEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccC
Confidence 567899999999999985 567899999997532 2355688899999999999999999987644 46799999999
Q ss_pred CCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--
Q 005177 525 NGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 598 (710)
Q Consensus 525 ~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~-- 598 (710)
+++|.+++.. .+++.+...++.+++.|++|||+. +|+||||||+||+++.++.++|+|||+++........
T Consensus 84 ~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 160 (257)
T cd08223 84 GGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAS 160 (257)
T ss_pred CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEecccCCccc
Confidence 9999999864 368899999999999999999998 9999999999999999999999999998765322111
Q ss_pred CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHH
Q 005177 599 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 678 (710)
Q Consensus 599 ~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (710)
...+...+.+||......++.++|||||||+++||++|+.|+..... .... ....... .. .........+.
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~-~~~~-----~~~~~~~-~~--~~~~~~~~~~~ 231 (257)
T cd08223 161 TLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM-NSLV-----YRIIEGK-LP--PMPKDYSPELG 231 (257)
T ss_pred cccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-HHHH-----HHHHhcC-CC--CCccccCHHHH
Confidence 11133446788988888888999999999999999999998763321 1100 0010000 10 11112335677
Q ss_pred HHHhhcCCCCCCCCCCHHHHHHH
Q 005177 679 DVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 679 ~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+++.+|++.+|++||++.|++++
T Consensus 232 ~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 232 ELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred HHHHHHhccCcccCCCHHHHhcC
Confidence 89999999999999999999763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=284.89 Aligned_cols=243 Identities=19% Similarity=0.207 Sum_probs=186.2
Q ss_pred hhhhhcCCCCCccEEEEcC------CCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVLP------TGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~------~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
....+|+|+||.||+|... +...||+|.+..... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 88 (275)
T cd05046 9 EITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILE 88 (275)
T ss_pred eeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEE
Confidence 6778999999999999852 356899999875433 25678999999999999999999999999899999999
Q ss_pred ecCCCChhhhhhc-----------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccc
Q 005177 522 YLPNGNLSEKIRT-----------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 590 (710)
Q Consensus 522 y~~~gsL~~~l~~-----------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~ 590 (710)
|+++|+|.++++. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.++++|||+++
T Consensus 89 ~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~~~~~~ 165 (275)
T cd05046 89 YTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLLSLSK 165 (275)
T ss_pred ecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEccccccc
Confidence 9999999999864 357899999999999999999998 99999999999999999999999999986
Q ss_pred cccccCC---CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccccccc-ccC
Q 005177 591 LTQLADG---SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNEN-EVG 665 (710)
Q Consensus 591 ~~~~~~~---~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~ 665 (710)
....... ........+.+||.......+.++|||||||++|||++ |..|+...... . ......... ...
T Consensus 166 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~-~-----~~~~~~~~~~~~~ 239 (275)
T cd05046 166 DVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE-E-----VLNRLQAGKLELP 239 (275)
T ss_pred ccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH-H-----HHHHHHcCCcCCC
Confidence 4321110 01111222667787766677889999999999999999 56666432211 0 000110000 000
Q ss_pred CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhc
Q 005177 666 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 704 (710)
Q Consensus 666 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~ 704 (710)
... .....+.+++.+|++.+|++||++.|++++|++
T Consensus 240 ~~~---~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 240 VPE---GCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred CCC---CCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 011 112457789999999999999999999998853
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=294.32 Aligned_cols=243 Identities=23% Similarity=0.281 Sum_probs=188.3
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchh----HHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATR----IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~----~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
+-|. +...||.|+||.||-|.. .+..+||||++.-+..+ -.++.+||+.|.+++|||+|.+.|||..+...+|
T Consensus 26 klf~--dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWL 103 (948)
T KOG0577|consen 26 KLFS--DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWL 103 (948)
T ss_pred HHHH--HHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHH
Confidence 3466 788999999999999984 67889999999864332 3567889999999999999999999999999999
Q ss_pred EEeecCCCChhhhh---hcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 519 LYDYLPNGNLSEKI---RTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 519 v~Ey~~~gsL~~~l---~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
|||||- ||-.|++ +.++..-....|+.|+..||+|||+. +.||||||+.||||.+.|.+|++|||-|.+....
T Consensus 104 VMEYCl-GSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA 179 (948)
T KOG0577|consen 104 VMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA 179 (948)
T ss_pred HHHHHh-ccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCch
Confidence 999997 4655555 45667777888999999999999999 9999999999999999999999999998776543
Q ss_pred CCCCcccccccCchhhhh---ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHH
Q 005177 596 DGSFPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 672 (710)
Q Consensus 596 ~~~~~~~~~~~~~~e~~~---~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (710)
. ++. +++|+++||++. .+.|+-|+||||+|+++.||..+++|.+.-... .....-.-+..+....+.|
T Consensus 180 n-sFv-GTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAM-----SALYHIAQNesPtLqs~eW-- 250 (948)
T KOG0577|consen 180 N-SFV-GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-----SALYHIAQNESPTLQSNEW-- 250 (948)
T ss_pred h-ccc-CCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHH-----HHHHHHHhcCCCCCCCchh--
Confidence 2 333 455566667654 346899999999999999999999887632211 0011111112212223334
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 005177 673 EIKLVLDVALLCTRSTPSDRPSMEEALKLL 702 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L 702 (710)
...++.++..|++.-|.+|||.++++++-
T Consensus 251 -S~~F~~Fvd~CLqKipqeRptse~ll~H~ 279 (948)
T KOG0577|consen 251 -SDYFRNFVDSCLQKIPQERPTSEELLKHR 279 (948)
T ss_pred -HHHHHHHHHHHHhhCcccCCcHHHHhhcc
Confidence 44566777789999999999999988753
|
|
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=299.63 Aligned_cols=239 Identities=21% Similarity=0.270 Sum_probs=185.1
Q ss_pred hhhhcCCCCCccEEEEc-CCCcEEEEEEeec-----cchhHHHHHHHHHHHhccCCCCceeEEEEEEcCC--ceeEEEee
Q 005177 451 CEEAARPQSAAGCKAVL-PTGITVSVKKIEW-----GATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH--QAYLLYDY 522 (710)
Q Consensus 451 ~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~-----~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~--~~~lv~Ey 522 (710)
..++|+|+|-+||||.. .+|..||---++. .....+.|.+|+.+|+.++|||||+++.++.+.. ..-+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 37899999999999986 5688887544433 2223578999999999999999999999998765 47899999
Q ss_pred cCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC-CCceEEcccCccccccccCCCC
Q 005177 523 LPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-NMEPHLAEFGFKYLTQLADGSF 599 (710)
Q Consensus 523 ~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~-~~~~kl~DfGla~~~~~~~~~~ 599 (710)
|..|+|..|+++ ..+......++.||.+||.|||++ .|||||||||..||+++. .|.+||+|.|+|.+........
T Consensus 125 ~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aks 203 (632)
T KOG0584|consen 125 FTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKS 203 (632)
T ss_pred ccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhccccce
Confidence 999999999976 557777889999999999999996 789999999999999995 5899999999998875432222
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHH-HHHHHH
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD-EIKLVL 678 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 678 (710)
.-+++-.++||.+. ..|++.+||||||+.++||+|+..|+.+-.+... ...++.... . +..+.. .-+++.
T Consensus 204 vIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQ-----IYKKV~SGi-K--P~sl~kV~dPevr 274 (632)
T KOG0584|consen 204 VIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQ-----IYKKVTSGI-K--PAALSKVKDPEVR 274 (632)
T ss_pred eccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHH-----HHHHHHcCC-C--HHHhhccCCHHHH
Confidence 23445455677766 6789999999999999999999999875433211 111111111 0 000000 124677
Q ss_pred HHHhhcCCCCCCCCCCHHHHHH
Q 005177 679 DVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 679 ~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
+++.+|+.. .++|||+.|+++
T Consensus 275 ~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 275 EFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred HHHHHHhcC-chhccCHHHHhh
Confidence 888999999 999999999876
|
|
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-33 Score=290.53 Aligned_cols=248 Identities=21% Similarity=0.239 Sum_probs=185.6
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch------hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT------RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~------~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
..+.||+|++|.||+|.. .+|+.||||++..... ....+..|++.+++++|+||+++++++.+.+..++||||
T Consensus 4 ~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 83 (298)
T cd07841 4 KGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEF 83 (298)
T ss_pred eeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEcc
Confidence 557799999999999985 5789999999986432 234567899999999999999999999999999999999
Q ss_pred cCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC
Q 005177 523 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 599 (710)
Q Consensus 523 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 599 (710)
+ +|+|.+++.. .+++..+..++.|+++||+|||+. +|+|+||||+||+++.++.+||+|||+++.........
T Consensus 84 ~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~ 159 (298)
T cd07841 84 M-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKM 159 (298)
T ss_pred c-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeeccCCCccc
Confidence 9 8999999975 368999999999999999999998 99999999999999999999999999987654321111
Q ss_pred c--ccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc---------------ccccccccccccc
Q 005177 600 P--AKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPIDGLLGEMYNE 661 (710)
Q Consensus 600 ~--~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~---------------~~~~~~~~~~~~~ 661 (710)
. .....+.+||...+ ..++.++|||||||++|||++|..|+........ |+...........
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (298)
T cd07841 160 THQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEF 239 (298)
T ss_pred cccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccc
Confidence 1 12234667776643 4568889999999999999999666553222110 0000000000000
Q ss_pred cccC---CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 662 NEVG---SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 662 ~~~~---~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.... ...........+.+++.+|++.+|++|||+.|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 240 KPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred cccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0000 000111224567899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-33 Score=287.96 Aligned_cols=244 Identities=18% Similarity=0.202 Sum_probs=185.8
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhcc-CCCCceeEEEEEEc------CCc
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYN------RHQ 515 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~------~~~ 515 (710)
..|. ..+.+|+|+||.||+|.. .+++.||+|.+.........+..|+.++.++ +||||+++++++.. .+.
T Consensus 16 ~~~~--~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 93 (282)
T cd06636 16 GIFE--LVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQ 93 (282)
T ss_pred hhhh--hheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCE
Confidence 3455 668899999999999986 6789999999976655566788889999888 69999999999853 457
Q ss_pred eeEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 516 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
.++||||+++|+|.+++.. ..++.....++.|+++|++|||+. +|+||||||+||++++++.++|+|||+++.
T Consensus 94 ~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~~~l~dfg~~~~ 170 (282)
T cd06636 94 LWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 170 (282)
T ss_pred EEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCcchhh
Confidence 8999999999999998864 356777889999999999999998 999999999999999999999999999875
Q ss_pred ccccCCC--CcccccccCchhhhh-----ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccccccc
Q 005177 592 TQLADGS--FPAKIAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 664 (710)
Q Consensus 592 ~~~~~~~--~~~~~~~~~~~e~~~-----~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (710)
....... ...+...|.+||... ...++.++|||||||++|||+||+.|+.+...... ........ .
T Consensus 171 ~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~------~~~~~~~~-~ 243 (282)
T cd06636 171 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA------LFLIPRNP-P 243 (282)
T ss_pred hhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhh------hhhHhhCC-C
Confidence 4321111 111333466777654 34577889999999999999999999864322111 00110110 0
Q ss_pred CCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 665 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 665 ~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
. ..........+.+++.+||+.||++||++.|+++
T Consensus 244 ~-~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 244 P-KLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred C-CCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 0 0011122346788999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=288.78 Aligned_cols=246 Identities=17% Similarity=0.235 Sum_probs=192.1
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
..|. ..+.+|+|+||.||++.. .++..||+|.+.... ...+.+.+|+.++++++||||++++++|...+..++|||
T Consensus 19 ~~~~--~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e 96 (293)
T cd06647 19 KKYT--RFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVME 96 (293)
T ss_pred hhce--eeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEe
Confidence 4465 668899999999999984 578899999987532 335668889999999999999999999999999999999
Q ss_pred ecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--
Q 005177 522 YLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 598 (710)
Q Consensus 522 y~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~-- 598 (710)
|+++|+|.+++.. ..++..+..++.|++.|+.|||+. +++||||||+||+++.++.+||+|||++.........
T Consensus 97 ~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~ 173 (293)
T cd06647 97 YLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 173 (293)
T ss_pred cCCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceecccccccccc
Confidence 9999999999976 568889999999999999999998 9999999999999999999999999987654322211
Q ss_pred CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHH
Q 005177 599 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 678 (710)
Q Consensus 599 ~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (710)
...+...+.+||......++.++|||||||++||+++|+.|+........... ....+. ............+.
T Consensus 174 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~-----~~~~~~--~~~~~~~~~~~~l~ 246 (293)
T cd06647 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-----IATNGT--PELQNPEKLSAIFR 246 (293)
T ss_pred cccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee-----hhcCCC--CCCCCccccCHHHH
Confidence 11123346677877777788899999999999999999999874432211000 000111 00111112234567
Q ss_pred HHHhhcCCCCCCCCCCHHHHHHH
Q 005177 679 DVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 679 ~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+++.+||+.+|++||+++|++.+
T Consensus 247 ~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 247 DFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred HHHHHHccCChhhCcCHHHHhcC
Confidence 88999999999999999999875
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=296.84 Aligned_cols=238 Identities=18% Similarity=0.266 Sum_probs=189.9
Q ss_pred hhhhhcCCCCCccEEEEc--CCCc--EEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVL--PTGI--TVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~--~~g~--~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
..++||+|.||.|.+|.+ ++|+ .||||.++.+.. ...+|.+|+..|.+++|||+|+|||+..+ ....||||.+
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELa 192 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELA 192 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhc
Confidence 678999999999999985 5554 689999987543 47789999999999999999999999987 7789999999
Q ss_pred CCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC
Q 005177 524 PNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 599 (710)
Q Consensus 524 ~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 599 (710)
+.|||.+.|+. .+-...-..++.|||+||+||..+ +.|||||.+.|+|+...-.+||+|||+.|........+
T Consensus 193 plGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Y 269 (1039)
T KOG0199|consen 193 PLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMY 269 (1039)
T ss_pred ccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCCCCcce
Confidence 99999999987 233556679999999999999998 99999999999999999999999999999876554443
Q ss_pred cc------cccccCchhhhhccCCccccceeeHHHHHHHHHhCC-CCCCCCCCCCcccccccccccccccccCCCcchHH
Q 005177 600 PA------KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNG-RLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 672 (710)
Q Consensus 600 ~~------~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (710)
.. ..+| .+||.+...+++.++|||+|||.+|||+|++ .||.+-... .++..+-+...+..+. .
T Consensus 270 vm~p~rkvPfAW-CaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~------qIL~~iD~~erLpRPk---~ 339 (1039)
T KOG0199|consen 270 VMAPQRKVPFAW-CAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI------QILKNIDAGERLPRPK---Y 339 (1039)
T ss_pred EecCCCcCcccc-cCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH------HHHHhccccccCCCCC---C
Confidence 22 3443 3568888999999999999999999999954 455432211 1122222222122222 3
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 673 EIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..+++.+++.+||+.+|.+|||+.++.+.
T Consensus 340 csedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 340 CSEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred ChHHHHHHHHHhccCCccccccHHHHHHh
Confidence 45678899999999999999999999744
|
|
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=311.32 Aligned_cols=252 Identities=15% Similarity=0.122 Sum_probs=181.9
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCC------CCceeEEEEEEcC-Cc
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRH------KNLIRLLGFCYNR-HQ 515 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H------~niv~l~g~~~~~-~~ 515 (710)
..|. ..+.||+|+||.||+|.. .+++.||||+++......+.+..|++++++++| ++++++++++..+ +.
T Consensus 129 ~~y~--i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~ 206 (467)
T PTZ00284 129 QRFK--ILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGH 206 (467)
T ss_pred CcEE--EEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCce
Confidence 3455 778999999999999985 568899999997543334455667777776655 4589999998764 57
Q ss_pred eeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC--------------
Q 005177 516 AYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM-------------- 579 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~-------------- 579 (710)
.++||||+ +++|.+++.. .+++.....|+.|++.||+|||+.+ +||||||||+|||++.++
T Consensus 207 ~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~--gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~ 283 (467)
T PTZ00284 207 MCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTEL--HLMHTDLKPENILMETSDTVVDPVTNRALPPD 283 (467)
T ss_pred EEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcC--CeecCCCCHHHEEEecCCcccccccccccCCC
Confidence 89999988 6789988865 5788899999999999999999732 899999999999998765
Q ss_pred --ceEEcccCccccccccCCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc-cccc-
Q 005177 580 --EPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-DGLL- 655 (710)
Q Consensus 580 --~~kl~DfGla~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~-~~~~- 655 (710)
.+||+|||.+........ ...++.+|.+||+..+..++.++|||||||++|||+||+.||........... ....
T Consensus 284 ~~~vkl~DfG~~~~~~~~~~-~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g 362 (467)
T PTZ00284 284 PCRVRICDLGGCCDERHSRT-AIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLG 362 (467)
T ss_pred CceEEECCCCccccCccccc-cccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcC
Confidence 499999998754322211 12244557888988888899999999999999999999999874332110000 0000
Q ss_pred ---------------cccccccc----cCCC---------cchHH--HHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 656 ---------------GEMYNENE----VGSS---------SSLQD--EIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 656 ---------------~~~~~~~~----~~~~---------~~~~~--~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.++++... ...+ ....+ ....+.+++.+|++.||++|||++|++++
T Consensus 363 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~H 438 (467)
T PTZ00284 363 RLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTH 438 (467)
T ss_pred CCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcC
Confidence 00000000 0000 00000 12456799999999999999999999873
|
|
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=298.78 Aligned_cols=238 Identities=21% Similarity=0.264 Sum_probs=190.2
Q ss_pred hhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 452 EEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
-++|+|.||+||-|.. .+...+|||-+.... ...+-+.+||.+-++++|+|||+++|.|.+++.+-|.||-+|||||.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 4789999999999985 567789999997643 33566889999999999999999999999999999999999999999
Q ss_pred hhhhc---CC--CHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC-CCceEEcccCcccccccc---CCCCc
Q 005177 530 EKIRT---KR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-NMEPHLAEFGFKYLTQLA---DGSFP 600 (710)
Q Consensus 530 ~~l~~---~~--~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~-~~~~kl~DfGla~~~~~~---~~~~~ 600 (710)
++|+. ++ +..+.-.+..||.+||.|||.. .|||||||-.|||++. .|.+||+|||-+|..... ...+.
T Consensus 661 sLLrskWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFT 737 (1226)
T KOG4279|consen 661 SLLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFT 737 (1226)
T ss_pred HHHHhccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccCCccccccc
Confidence 99986 23 5667778899999999999999 9999999999999984 789999999987754322 22334
Q ss_pred ccccccCchhhhhc--cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHH
Q 005177 601 AKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 678 (710)
Q Consensus 601 ~~~~~~~~~e~~~~--~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (710)
++.. |++||++.. ..|+.++|||||||.+.||.||++||.+-...+..++.. .++.. .++.+.+...++.
T Consensus 738 GTLQ-YMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkV---GmyKv----HP~iPeelsaeak 809 (1226)
T KOG4279|consen 738 GTLQ-YMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKV---GMYKV----HPPIPEELSAEAK 809 (1226)
T ss_pred cchh-hhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhh---cceec----CCCCcHHHHHHHH
Confidence 4556 456676654 358889999999999999999999998655444322221 11111 1333455667788
Q ss_pred HHHhhcCCCCCCCCCCHHHHHH
Q 005177 679 DVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 679 ~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
.++++|..+||.+||++.+++.
T Consensus 810 ~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 810 NFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHcCCCcccCccHHHhcc
Confidence 9999999999999999999875
|
|
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=292.11 Aligned_cols=248 Identities=23% Similarity=0.319 Sum_probs=186.2
Q ss_pred hhhhhcCCCCCccEEEEcC-CCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.+|+|++|.||+|... +|+.||+|++..... ..+.+.+|++++++++||||+++++++.+++..++||||+++
T Consensus 5 ~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 84 (286)
T cd07846 5 NLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDH 84 (286)
T ss_pred EeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCc
Confidence 6688999999999999874 689999999865322 245678899999999999999999999999999999999999
Q ss_pred CChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC--cc
Q 005177 526 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF--PA 601 (710)
Q Consensus 526 gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~--~~ 601 (710)
+++.++... .++|.+...++.|+++||+|||+. +|+|||+||+||++++++.+||+|||+++......... ..
T Consensus 85 ~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 161 (286)
T cd07846 85 TVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYV 161 (286)
T ss_pred cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCccc
Confidence 999888754 468999999999999999999998 99999999999999999999999999987643222111 11
Q ss_pred cccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc--------ccccccccc------ccccC-
Q 005177 602 KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI--------DGLLGEMYN------ENEVG- 665 (710)
Q Consensus 602 ~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~--------~~~~~~~~~------~~~~~- 665 (710)
+..++.+||+..+ ..++.++|||||||++|||+||+.|+........+.. ........+ .....
T Consensus 162 ~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (286)
T cd07846 162 ATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPE 241 (286)
T ss_pred ceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhcccccc
Confidence 2334667777654 4567889999999999999999888764332110000 000000000 00000
Q ss_pred --CCc----chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 666 --SSS----SLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 666 --~~~----~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
... ..+.....+.+++.+|++.+|++||+|.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 242 VKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred ccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 000 00122356788999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=282.79 Aligned_cols=242 Identities=22% Similarity=0.275 Sum_probs=188.3
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.||+|++|.||+|.. .++..||+|.++.... ..+.+.+|++++++++|+||+++++++...+..++|+||+++
T Consensus 4 ~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (264)
T cd06626 4 RGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSG 83 (264)
T ss_pred eeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCC
Confidence 567899999999999985 5789999999986533 467789999999999999999999999999999999999999
Q ss_pred CChhhhhhcC--CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC----
Q 005177 526 GNLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---- 599 (710)
Q Consensus 526 gsL~~~l~~~--~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~---- 599 (710)
++|.+++... .++..+..++.++++|++|||+. +|+|+||||+||++++++.+||+|||++..........
T Consensus 84 ~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~ 160 (264)
T cd06626 84 GTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEV 160 (264)
T ss_pred CcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccc
Confidence 9999999764 68888999999999999999998 99999999999999999999999999987653221111
Q ss_pred --cccccccCchhhhhccC---CccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 600 --PAKIAWTESGEFYNAMK---EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 600 --~~~~~~~~~~e~~~~~~---~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
......+.+||+..... .+.++||||||++++||++|+.|+........... .... ... .. .+......
T Consensus 161 ~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~--~~~~--~~~-~~-~~~~~~~~ 234 (264)
T cd06626 161 QSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMF--HVGA--GHK-PP-IPDSLQLS 234 (264)
T ss_pred cCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHH--HHhc--CCC-CC-CCcccccC
Confidence 11122355677766554 78899999999999999999999864321111000 0001 110 00 11111123
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
..+.+++.+|++.+|++||++.|++.
T Consensus 235 ~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 235 PEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHhc
Confidence 45668889999999999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=286.81 Aligned_cols=241 Identities=16% Similarity=0.261 Sum_probs=189.0
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
..+.||+|++|.||++.. .++..||+|++..... ..+.+.+|+.++++++||||+++++++...+..++|+||+++++
T Consensus 23 ~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~ 102 (285)
T cd06648 23 NFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGA 102 (285)
T ss_pred cceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCC
Confidence 557899999999999985 6789999999875432 34567889999999999999999999999999999999999999
Q ss_pred hhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Cccccc
Q 005177 528 LSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAKIA 604 (710)
Q Consensus 528 L~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~~~~ 604 (710)
|.+++.. .+++.....++.|++.|++|||+. +|+||||||+||+++.++.++++|||++......... ...+..
T Consensus 103 L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 179 (285)
T cd06648 103 LTDIVTHTRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTP 179 (285)
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCCc
Confidence 9999876 568888999999999999999998 9999999999999999999999999987654321111 111334
Q ss_pred ccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhc
Q 005177 605 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 684 (710)
Q Consensus 605 ~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 684 (710)
.+.+||......++.++|||||||++|||++|+.|+........ .. .......+. .. ........+.+++.+|
T Consensus 180 ~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~--~~-~~~~~~~~~-~~---~~~~~~~~l~~li~~~ 252 (285)
T cd06648 180 YWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQA--MK-RIRDNLPPK-LK---NLHKVSPRLRSFLDRM 252 (285)
T ss_pred cccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHH--HH-HHHhcCCCC-Cc---ccccCCHHHHHHHHHH
Confidence 46778887777788999999999999999999999864332110 00 000110000 10 1111234677899999
Q ss_pred CCCCCCCCCCHHHHHH
Q 005177 685 TRSTPSDRPSMEEALK 700 (710)
Q Consensus 685 l~~~p~~RPs~~evl~ 700 (710)
++.+|++||++.|+++
T Consensus 253 l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 253 LVRDPAQRATAAELLN 268 (285)
T ss_pred cccChhhCcCHHHHcc
Confidence 9999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=283.41 Aligned_cols=241 Identities=19% Similarity=0.246 Sum_probs=186.7
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc--chhHHHHHHHHHHHhccC---CCCceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG--ATRIKIVSEFITRIGTVR---HKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~---H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
..+.+|+|+||.||+|.. .+|..||+|.+... ....+.+.+|++++++++ |||++++++++..++..++||||+
T Consensus 5 ~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06917 5 RLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYA 84 (277)
T ss_pred hhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecC
Confidence 668899999999999985 68999999998753 223566788999988887 999999999999999999999999
Q ss_pred CCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Cc
Q 005177 524 PNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FP 600 (710)
Q Consensus 524 ~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~ 600 (710)
++++|.+++.. .+++.....++.|+++||.|||+. +|+||||||+||++++++.++++|||++......... ..
T Consensus 85 ~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (277)
T cd06917 85 EGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTF 161 (277)
T ss_pred CCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccccccc
Confidence 99999999865 568889999999999999999998 9999999999999999999999999998765432211 11
Q ss_pred ccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHH
Q 005177 601 AKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 679 (710)
Q Consensus 601 ~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (710)
.+...+.+||.... ..++.++|||||||++|||++|+.|+........ . . .......+. .. . ......+.+
T Consensus 162 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~-~-~-~~~~~~~~~-~~-~---~~~~~~~~~ 233 (277)
T cd06917 162 VGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA-M-M-LIPKSKPPR-LE-D---NGYSKLLRE 233 (277)
T ss_pred cCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh-h-h-ccccCCCCC-CC-c---ccCCHHHHH
Confidence 12333556776543 4568899999999999999999999864322111 0 0 000000000 11 0 012346778
Q ss_pred HHhhcCCCCCCCCCCHHHHHHH
Q 005177 680 VALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 680 l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
++.+|+..||++||++.|++++
T Consensus 234 ~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 234 FVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred HHHHHcCCCcccCcCHHHHhhC
Confidence 9999999999999999999764
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=281.34 Aligned_cols=244 Identities=20% Similarity=0.290 Sum_probs=188.9
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.+|.|++|.||+|.. .++..+|+|++.... ...+.+.+|++.+++++|+||+++++.+..++..++||||++++
T Consensus 5 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~ 84 (267)
T cd06610 5 LIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGG 84 (267)
T ss_pred eeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCC
Confidence 677899999999999984 578899999997532 24677899999999999999999999999999999999999999
Q ss_pred Chhhhhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC--
Q 005177 527 NLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF-- 599 (710)
Q Consensus 527 sL~~~l~~-----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~-- 599 (710)
+|.++++. ..++.....++.|++.|++|||+. +|+||||||+||++++++.+|++|||++..........
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~ 161 (267)
T cd06610 85 SLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRK 161 (267)
T ss_pred cHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcccccc
Confidence 99999864 357888899999999999999998 99999999999999999999999999987553221110
Q ss_pred ----cccccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 600 ----PAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 600 ----~~~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
..+...+.+||..... ..+.++|||||||++|||++|+.|+........ ....... .+.............
T Consensus 162 ~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~ 237 (267)
T cd06610 162 VRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV--LMLTLQN--DPPSLETGADYKKYS 237 (267)
T ss_pred ccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh--HHHHhcC--CCCCcCCcccccccc
Confidence 1123335567776655 678899999999999999999999864332111 0000111 000011011111234
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
..+.+++.+|++.||++||++.|+++
T Consensus 238 ~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 238 KSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 56778999999999999999999976
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=290.19 Aligned_cols=244 Identities=14% Similarity=0.119 Sum_probs=186.1
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.+|+|+||.||++.. .+++.||+|.+..... ..+.+.+|+++++.++||||+++++++.+++..++||||++
T Consensus 5 ~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 84 (305)
T cd05609 5 TIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVE 84 (305)
T ss_pred EeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCC
Confidence 667899999999999985 5688999999986432 34567789999999999999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-----
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG----- 597 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~----- 597 (710)
+|+|.+++.. ..++.....++.|+++|++|||+. +|+||||||+||+++.++.+|++|||+++.......
T Consensus 85 g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (305)
T cd05609 85 GGDCATLLKNIGALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYE 161 (305)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccc
Confidence 9999999965 457888889999999999999998 999999999999999999999999999874210000
Q ss_pred ------------CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccC
Q 005177 598 ------------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 665 (710)
Q Consensus 598 ------------~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (710)
....+...+.+||......++.++|||||||++|||+||+.|+.+... .. ......... ..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~-~~-----~~~~~~~~~-~~ 234 (305)
T cd05609 162 GHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP-EE-----LFGQVISDD-IE 234 (305)
T ss_pred cccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HH-----HHHHHHhcc-cC
Confidence 000122235677877777788999999999999999999999864321 11 111111110 00
Q ss_pred CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHh
Q 005177 666 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 703 (710)
Q Consensus 666 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~ 703 (710)
.+.........+.+++.+|++.+|++||++.++.+.|+
T Consensus 235 ~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 235 WPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred CCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 00000112345678999999999999999766655554
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-33 Score=284.09 Aligned_cols=253 Identities=18% Similarity=0.263 Sum_probs=184.9
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHH--hccCCCCceeEEEEEEcCC----ceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRI--GTVRHKNLIRLLGFCYNRH----QAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l--~~l~H~niv~l~g~~~~~~----~~~lv~Ey~ 523 (710)
..+++|+|+||.||||.+ +++.||||++... ..+.|..|-++. -.++|+||++++++-.... +++||+||.
T Consensus 214 l~eli~~Grfg~V~KaqL-~~~~VAVKifp~~--~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh 290 (534)
T KOG3653|consen 214 LLELIGRGRFGCVWKAQL-DNRLVAVKIFPEQ--EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFH 290 (534)
T ss_pred hHHHhhcCccceeehhhc-cCceeEEEecCHH--HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeec
Confidence 678999999999999998 5589999999754 345666666554 4778999999999877655 899999999
Q ss_pred CCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCC------CCCceecCCCCCCeEecCCCceEEcccCccccccccC
Q 005177 524 PNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDC------YPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 524 ~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~------~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 596 (710)
++|||.++|+. ..+|..-.+|+..+++||+|||+.. .|+|+|||||++|||+..|+++.|+|||+|..+....
T Consensus 291 ~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~ 370 (534)
T KOG3653|consen 291 PKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGK 370 (534)
T ss_pred cCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCC
Confidence 99999999987 5799999999999999999999854 4799999999999999999999999999998765322
Q ss_pred CC----CcccccccCchhhhhccC-Cc-----cccceeeHHHHHHHHHhCCCCCC-CCCCCCccccccc---------cc
Q 005177 597 GS----FPAKIAWTESGEFYNAMK-EE-----MYMDVYGFGEIILEILTNGRLTN-AGSSLQNKPIDGL---------LG 656 (710)
Q Consensus 597 ~~----~~~~~~~~~~~e~~~~~~-~~-----~~~DVySfGvvl~Elltg~~p~~-~~~~~~~~~~~~~---------~~ 656 (710)
.. ...++..|++||+.++.- .. .+.||||.|.|+|||+++....+ +.......++... +.
T Consensus 371 ~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq 450 (534)
T KOG3653|consen 371 PQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQ 450 (534)
T ss_pred CCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHH
Confidence 11 122455577777765421 11 23799999999999999765443 1111111122111 11
Q ss_pred c-cccccccC-CCcchH--HHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 657 E-MYNENEVG-SSSSLQ--DEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 657 ~-~~~~~~~~-~~~~~~--~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
+ ++..+..+ .+..+. ..+..+.+.+..||+.||+.|-|+.=|-+++.++
T Consensus 451 ~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l 503 (534)
T KOG3653|consen 451 ELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAEL 503 (534)
T ss_pred HHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHH
Confidence 1 11111011 111121 2355677889999999999999987777666544
|
|
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=280.86 Aligned_cols=244 Identities=18% Similarity=0.208 Sum_probs=192.9
Q ss_pred hhhhhcCCCCCccEEEEcC-CCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.||+|++|.||+|+.. +|+.||||++.... ...+.+.+|++.+.+++||||+++++++...+..++||||++++
T Consensus 5 ~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (264)
T cd06623 5 RVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGG 84 (264)
T ss_pred eeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCC
Confidence 5688999999999999864 59999999998654 34677899999999999999999999999999999999999999
Q ss_pred Chhhhhhc--CCCHHHHHHHHHHHHHHHHHHhc-CCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC--cc
Q 005177 527 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHH-DCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF--PA 601 (710)
Q Consensus 527 sL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~--~~ 601 (710)
+|.+++.. .+++..+..++.|+++|++|||+ . +++||||+|+||+++.++.++++|||+++......... ..
T Consensus 85 ~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~ 161 (264)
T cd06623 85 SLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFV 161 (264)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccCCCccccee
Confidence 99999964 56888899999999999999999 8 99999999999999999999999999987654322221 12
Q ss_pred cccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHH
Q 005177 602 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 681 (710)
Q Consensus 602 ~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 681 (710)
....+.+||......++.++||||||+++|||+||+.|+....... .......+........... .....+.+++
T Consensus 162 ~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~--~~~~~l~~li 236 (264)
T cd06623 162 GTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPS---FFELMQAICDGPPPSLPAE--EFSPEFRDFI 236 (264)
T ss_pred ecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccC---HHHHHHHHhcCCCCCCCcc--cCCHHHHHHH
Confidence 3334667888777788889999999999999999999986443100 0011111111110110111 0235677888
Q ss_pred hhcCCCCCCCCCCHHHHHHH
Q 005177 682 LLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 682 ~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+|++.+|++||++.|++++
T Consensus 237 ~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 237 SACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred HHHccCChhhCCCHHHHHhC
Confidence 99999999999999999874
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=288.86 Aligned_cols=243 Identities=24% Similarity=0.288 Sum_probs=186.2
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCcee
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 517 (710)
.+.|. ..+.+|+|++|.||+|.. .+|+.||+|.+.... ...+.+.+|++++++++||||++++++|.+++..+
T Consensus 14 ~~~y~--~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~ 91 (307)
T cd06607 14 EKLFT--DLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAW 91 (307)
T ss_pred chhhh--hheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEE
Confidence 34466 778999999999999986 578999999986432 23456888999999999999999999999999999
Q ss_pred EEEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccc
Q 005177 518 LLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 594 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~ 594 (710)
+||||++ |++.+.+.. .+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 92 lv~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 92 LVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSP 167 (307)
T ss_pred EEHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence 9999997 577776642 578999999999999999999998 999999999999999999999999999876532
Q ss_pred cCCCCcccccccCchhhhh---ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchH
Q 005177 595 ADGSFPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 671 (710)
Q Consensus 595 ~~~~~~~~~~~~~~~e~~~---~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (710)
.. ... +...+.+||... ...++.++|||||||++|||+||+.|+........ ........ .. .....
T Consensus 168 ~~-~~~-~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~------~~~~~~~~-~~-~~~~~ 237 (307)
T cd06607 168 AN-SFV-GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------LYHIAQND-SP-TLSSN 237 (307)
T ss_pred CC-Ccc-CCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH------HHHHhcCC-CC-CCCch
Confidence 21 111 223356677653 34578899999999999999999998764321110 00000000 00 00111
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 672 DEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 672 ~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.....+.+++.+||+.+|++||+|.+++.+
T Consensus 238 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 238 DWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred hhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 233467889999999999999999999875
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-32 Score=278.22 Aligned_cols=241 Identities=21% Similarity=0.289 Sum_probs=187.2
Q ss_pred hhhhhcCCCCCccEEEEcCC-----CcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVLPT-----GITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~-----g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
..+.+|+|+||.||++.... +..||+|.+..... ..+.+.+|++.+.+++||||+++++++.+.+..+++|||
T Consensus 3 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~ 82 (258)
T smart00219 3 LGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEY 82 (258)
T ss_pred ccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEec
Confidence 45778999999999998633 48899999986543 467889999999999999999999999999999999999
Q ss_pred cCCCChhhhhhc--C--CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC
Q 005177 523 LPNGNLSEKIRT--K--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 598 (710)
Q Consensus 523 ~~~gsL~~~l~~--~--~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 598 (710)
+++++|.+++.. . .++.+...++.|++.|++|||+. +++||||||+||++++++.++++|||+++........
T Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~ 159 (258)
T smart00219 83 MEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYY 159 (258)
T ss_pred cCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceeccccccc
Confidence 999999999864 2 78999999999999999999998 9999999999999999999999999998765432111
Q ss_pred Cc---ccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 599 FP---AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 599 ~~---~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
.. .....+.+||......++.++||||+||+++||++ |+.|+.... ... ....+.......... ...
T Consensus 160 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~-~~~-----~~~~~~~~~~~~~~~---~~~ 230 (258)
T smart00219 160 KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS-NEE-----VLEYLKKGYRLPKPE---NCP 230 (258)
T ss_pred ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC-HHH-----HHHHHhcCCCCCCCC---cCC
Confidence 11 11233567787777778999999999999999999 555554311 110 000111111011111 123
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKLL 702 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~L 702 (710)
..+.+++.+|+..+|++|||+.|+++.|
T Consensus 231 ~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 231 PEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 4677899999999999999999998764
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-33 Score=248.00 Aligned_cols=247 Identities=21% Similarity=0.266 Sum_probs=188.8
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchh---HHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATR---IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.||+|.||+||||+- .+++.||+|+++.+... .....+||-+++.++|+|||+++++...+...-+|+|||..
T Consensus 6 kmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cdq 85 (292)
T KOG0662|consen 6 KMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ 85 (292)
T ss_pred HHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhhH
Confidence 678999999999999984 77899999999874322 45678899999999999999999999999999999999975
Q ss_pred CChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCcc-
Q 005177 526 GNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPA- 601 (710)
Q Consensus 526 gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~- 601 (710)
+|..+... .++.......+.|+.+||.|+|++ .+.|||+||.|.|++.+|+.|++|||+++........++.
T Consensus 86 -dlkkyfdslng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipvrcysae 161 (292)
T KOG0662|consen 86 -DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAE 161 (292)
T ss_pred -HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeece
Confidence 77666543 567777889999999999999999 9999999999999999999999999999987654333333
Q ss_pred -cccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCC----------------cccccccccccccccc
Q 005177 602 -KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ----------------NKPIDGLLGEMYNENE 663 (710)
Q Consensus 602 -~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~----------------~~~~~~~~~~~~~~~~ 663 (710)
.+-||.+|.+..+ .-+++..|+||.|||+.|+.-.++|.+.+.+.. .|+....+.+.. +.+
T Consensus 162 vvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk-~yp 240 (292)
T KOG0662|consen 162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYK-PYP 240 (292)
T ss_pred eeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCc-ccC
Confidence 4568888866544 447888999999999999988778866443321 122111111110 000
Q ss_pred -cCCCcchHHHHH----HHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 664 -VGSSSSLQDEIK----LVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 664 -~~~~~~~~~~~~----~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+....+.+.++ ...++..+.+..+|.+|.++++++++
T Consensus 241 ~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 241 IYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred CccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 011122333333 45677788888899999999998764
|
|
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-32 Score=284.54 Aligned_cols=247 Identities=20% Similarity=0.288 Sum_probs=182.1
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.+|+|++|.||+|.. .+|+.||||.+..... ....+.+|++++++++||||+++++++.+++..++||||++ +
T Consensus 9 ~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~ 87 (291)
T cd07844 9 KLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLD-T 87 (291)
T ss_pred EEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCC-C
Confidence 668899999999999986 4789999999875322 23456789999999999999999999999999999999998 5
Q ss_pred Chhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC--cc
Q 005177 527 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF--PA 601 (710)
Q Consensus 527 sL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~--~~ 601 (710)
+|.+++.. ..++.....++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+++......... ..
T Consensus 88 ~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 164 (291)
T cd07844 88 DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNEV 164 (291)
T ss_pred CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCCCccccccc
Confidence 99998864 457888899999999999999998 99999999999999999999999999986543211111 11
Q ss_pred cccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc----------ccccccccc------ccccc-
Q 005177 602 KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK----------PIDGLLGEM------YNENE- 663 (710)
Q Consensus 602 ~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~----------~~~~~~~~~------~~~~~- 663 (710)
....+.+||...+ ..++.++||||+||++|||++|+.|+.+....... ......... .....
T Consensus 165 ~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (291)
T cd07844 165 VTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFP 244 (291)
T ss_pred cccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccccccccc
Confidence 2233567787654 45788999999999999999999988643311000 000000000 00000
Q ss_pred cCCCcch----H--HHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 664 VGSSSSL----Q--DEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 664 ~~~~~~~----~--~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
....... . .....+.+++.+|++.+|++|||+.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 245 FYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred ccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0000000 0 01245678999999999999999999875
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=282.80 Aligned_cols=245 Identities=20% Similarity=0.220 Sum_probs=186.9
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCC------c
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRH------Q 515 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~------~ 515 (710)
+.|. ..+.+|+|++|.||+|.. .++..+|+|.+.......+.+.+|+++++++ +||||+++++++.... .
T Consensus 6 ~~y~--~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 83 (275)
T cd06608 6 GIFE--LVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQ 83 (275)
T ss_pred hhee--heeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceE
Confidence 3455 678899999999999986 4688999999987666667889999999998 6999999999997644 4
Q ss_pred eeEEEeecCCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcc
Q 005177 516 AYLLYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK 589 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla 589 (710)
.++||||+++++|.+++.. .+++.....++.|+++||+|||+. +|+|+||+|+||++++++.+|++|||++
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~~~~ 160 (275)
T cd06608 84 LWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGVS 160 (275)
T ss_pred EEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCCccc
Confidence 8999999999999998753 457888899999999999999998 9999999999999999999999999998
Q ss_pred ccccccCCC--CcccccccCchhhhhc-----cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccccc
Q 005177 590 YLTQLADGS--FPAKIAWTESGEFYNA-----MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN 662 (710)
Q Consensus 590 ~~~~~~~~~--~~~~~~~~~~~e~~~~-----~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 662 (710)
......... ...+...+.+||.... ..++.++|||||||+++||+||+.|+........ ..++....
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~------~~~~~~~~ 234 (275)
T cd06608 161 AQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRA------LFKIPRNP 234 (275)
T ss_pred eecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHH------HHHhhccC
Confidence 654321111 1112333556676532 3467789999999999999999999864321110 01111110
Q ss_pred ccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 663 EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 663 ~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
.............+.+++.+|+..||++|||+.|+++
T Consensus 235 -~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 235 -PPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred -CCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 0001111123456778999999999999999999976
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-33 Score=289.72 Aligned_cols=247 Identities=19% Similarity=0.231 Sum_probs=183.0
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.+|+|++|.||+|.. .+|..||||+++.... ..+.+.+|++.+++++||||+++++++.+++..++||||++
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~- 82 (284)
T cd07860 4 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH- 82 (284)
T ss_pred eeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-
Confidence 667899999999999985 5789999999875322 23568889999999999999999999999999999999996
Q ss_pred CChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCc-
Q 005177 526 GNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFP- 600 (710)
Q Consensus 526 gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~- 600 (710)
++|.+++.. .+++.....++.|+++||+|||+. +++||||||+||++++++.+|++|||+++..........
T Consensus 83 ~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (284)
T cd07860 83 QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 159 (284)
T ss_pred cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCcccccc
Confidence 689888754 458889999999999999999998 999999999999999999999999999875532211111
Q ss_pred -ccccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc-ccc--------------ccccccccc
Q 005177 601 -AKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-DGL--------------LGEMYNENE 663 (710)
Q Consensus 601 -~~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~-~~~--------------~~~~~~~~~ 663 (710)
....++.+||...+. .++.++|||||||++|||+||+.|+........... ... ..+......
T Consensus 160 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd07860 160 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFP 239 (284)
T ss_pred ccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcc
Confidence 123346677765443 357889999999999999999998864332110000 000 000000000
Q ss_pred cCCCcch----HHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 664 VGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 664 ~~~~~~~----~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
....... ......+.+++.+|++.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 240 KWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred cccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 0000000 011245678999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=281.66 Aligned_cols=240 Identities=16% Similarity=0.169 Sum_probs=182.9
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc------hhHHHHHHHHHHHhccCCCCceeEEEEEEcC--CceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA------TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~------~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ 520 (710)
..+.+|+|+||.||+|.. .+|..||||.+.... ...+.+.+|++++++++||||+++++++.+. ...++||
T Consensus 6 ~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~ 85 (265)
T cd06652 6 LGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFM 85 (265)
T ss_pred EeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEE
Confidence 678899999999999985 568999999986421 2245788899999999999999999998764 4678999
Q ss_pred eecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC--
Q 005177 521 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD-- 596 (710)
Q Consensus 521 Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~-- 596 (710)
||+++|+|.+++.. ..++....+++.|++.||+|||+. +|+|+||||+||+++.++.+||+|||+++......
T Consensus 86 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~ 162 (265)
T cd06652 86 EHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLS 162 (265)
T ss_pred EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCcccccccccccc
Confidence 99999999999865 457788889999999999999998 99999999999999999999999999987543211
Q ss_pred ---CCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 597 ---GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 597 ---~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
.....+...+.+||......++.++|||||||++|||++|+.|+........ .... ...+. . +......
T Consensus 163 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~--~~~~---~~~~~-~--~~~~~~~ 234 (265)
T cd06652 163 GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAA--IFKI---ATQPT-N--PVLPPHV 234 (265)
T ss_pred ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHH--HHHH---hcCCC-C--CCCchhh
Confidence 0111123346678887777788999999999999999999999864321110 0000 00110 0 1111223
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
...+.+++.+|+. +|++||+++|+++.
T Consensus 235 ~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 235 SDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred CHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 3456677788885 99999999999753
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=284.14 Aligned_cols=239 Identities=12% Similarity=0.050 Sum_probs=177.5
Q ss_pred hhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHH---HhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 453 EAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITR---IGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~---l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
.||+|+||.||++.. .+|+.+|+|.+..... ..+.+.+|..+ +...+||||+.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 479999999999986 5689999999875321 12333444433 334579999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCccc
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK 602 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~ 602 (710)
+|+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+||++++++.++++|||++............+
T Consensus 81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 157 (279)
T cd05633 81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG 157 (279)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCC
Confidence 9999998864 578999999999999999999998 99999999999999999999999999986543222222223
Q ss_pred ccccCchhhhh-ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHH
Q 005177 603 IAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 681 (710)
Q Consensus 603 ~~~~~~~e~~~-~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 681 (710)
...+.+||... ...++.++|||||||++|||+||+.||......... ...+.........+ ......+.+++
T Consensus 158 ~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~li 230 (279)
T cd05633 158 THGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH----EIDRMTLTVNVELP---DSFSPELKSLL 230 (279)
T ss_pred CcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH----HHHHHhhcCCcCCc---cccCHHHHHHH
Confidence 33466777665 355788999999999999999999998643211100 00111000000001 12234567888
Q ss_pred hhcCCCCCCCCC-----CHHHHHHH
Q 005177 682 LLCTRSTPSDRP-----SMEEALKL 701 (710)
Q Consensus 682 ~~Cl~~~p~~RP-----s~~evl~~ 701 (710)
.+|+..||++|| +++|++++
T Consensus 231 ~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 231 EGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred HHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 899999999999 59998875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=280.75 Aligned_cols=243 Identities=20% Similarity=0.255 Sum_probs=187.8
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEc--CCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~lv~Ey~ 523 (710)
..+.+|.|++|.||++.. .+|..||+|.+... ....+.+.+|++++++++||||+++++++.. +...++||||+
T Consensus 4 ~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~ 83 (265)
T cd08217 4 VLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYC 83 (265)
T ss_pred eeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhc
Confidence 567899999999999985 67889999998753 2235567889999999999999999998864 34679999999
Q ss_pred CCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCC--CCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 524 PNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDC--YPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 524 ~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~--~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
++|+|.+++.. .+++.....++.|+++|++|||..+ ..+|+|+||||+||+++.++.+|++|||+++.....
T Consensus 84 ~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~ 163 (265)
T cd08217 84 EGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHD 163 (265)
T ss_pred cCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccCC
Confidence 99999999853 4688899999999999999999332 339999999999999999999999999998865432
Q ss_pred CC--CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 596 DG--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 596 ~~--~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
.. ....+...+.+||......++.++||||||++++||++|+.|+...... . ....+.... .. ......
T Consensus 164 ~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~-----~~~~~~~~~-~~--~~~~~~ 234 (265)
T cd08217 164 SSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL-Q-----LASKIKEGK-FR--RIPYRY 234 (265)
T ss_pred cccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH-H-----HHHHHhcCC-CC--CCcccc
Confidence 21 1112334467788877777888999999999999999999998643211 0 001111111 10 111123
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
...+.+++.+|++.+|++||++.||+++
T Consensus 235 ~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 235 SSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred CHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 3567789999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-32 Score=283.80 Aligned_cols=241 Identities=18% Similarity=0.191 Sum_probs=178.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHH-HhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITR-IGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~-l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.||+|+||.||++.. .+|+.||+|+++... .....+..|+.. ++..+|||||++++++..++..++||||++
T Consensus 5 ~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~- 83 (283)
T cd06617 5 VIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMD- 83 (283)
T ss_pred EEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhc-
Confidence 667899999999999986 579999999997642 223344445554 667789999999999999999999999997
Q ss_pred CChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC
Q 005177 526 GNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 599 (710)
Q Consensus 526 gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 599 (710)
|+|.+++.. ..++....+++.|++.||+|||+.+ +++||||||+||+++.++.+||+|||+++.........
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 161 (283)
T cd06617 84 TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKT 161 (283)
T ss_pred ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 688877753 4578889999999999999999753 79999999999999999999999999987543221111
Q ss_pred -cccccccCchhhhhc----cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 600 -PAKIAWTESGEFYNA----MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 600 -~~~~~~~~~~e~~~~----~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
..+...+.+||.... ..++.++|||||||++|||++|+.|+........ .............+ .....
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~ 234 (283)
T cd06617 162 IDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQ-----QLKQVVEEPSPQLP--AEKFS 234 (283)
T ss_pred cccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHH-----HHHHHHhcCCCCCC--ccccC
Confidence 112333567776543 3467889999999999999999999863221100 01111111100000 01123
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
..+.+++.+|+..+|++||++.|+++
T Consensus 235 ~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 235 PEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 45778999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.4e-32 Score=279.65 Aligned_cols=240 Identities=16% Similarity=0.174 Sum_probs=187.1
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.+|+|++|.||++.. .++..+|||.+.... ...+.+.+|++++++++||||+++++++..++..++||||+++
T Consensus 4 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd08220 4 KIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPG 83 (256)
T ss_pred EEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCC
Confidence 667899999999999985 578899999997532 2356788999999999999999999999999999999999999
Q ss_pred CChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC-CceEEcccCccccccccCCC-C
Q 005177 526 GNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-MEPHLAEFGFKYLTQLADGS-F 599 (710)
Q Consensus 526 gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~-~~~kl~DfGla~~~~~~~~~-~ 599 (710)
++|.+++.. ..++..+.+++.++++|++|||+. +|+||||||+||+++.+ +.+|++|||+++........ .
T Consensus 84 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~ 160 (256)
T cd08220 84 GTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYT 160 (256)
T ss_pred CCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccccc
Confidence 999999965 367888999999999999999998 99999999999999854 56899999998765432211 1
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 679 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (710)
..+...+.+||.......+.++|||||||++|||++|+.|+..... .... .......... ........+.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~-~~~~-----~~~~~~~~~~---~~~~~~~~l~~ 231 (256)
T cd08220 161 VVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL-PALV-----LKIMSGTFAP---ISDRYSPDLRQ 231 (256)
T ss_pred cccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch-HHHH-----HHHHhcCCCC---CCCCcCHHHHH
Confidence 1123346677887777788899999999999999999998864321 1111 1111111000 00112345678
Q ss_pred HHhhcCCCCCCCCCCHHHHHHH
Q 005177 680 VALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 680 l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
++.+||+.+|++|||++|++++
T Consensus 232 li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 232 LILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred HHHHHccCChhhCCCHHHHhhC
Confidence 8999999999999999999763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.2e-33 Score=299.35 Aligned_cols=244 Identities=20% Similarity=0.305 Sum_probs=190.9
Q ss_pred hhhhhcCCCCCccEEEEc-CCC----cEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVL-PTG----ITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g----~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
...+||.|+||+||||.+ +.| .+||+|.+.... ...+++.+|.-.|.+++|||+++|+|+|.... ..||++|
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~ 778 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQL 778 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHh
Confidence 567899999999999984 665 479999998643 34778999999999999999999999998765 8899999
Q ss_pred cCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC
Q 005177 523 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 599 (710)
Q Consensus 523 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 599 (710)
||.|+|.|+++. .+.-...+.|.+|||+||.|||.+ +++||||-++|||+.+-..+||.|||+|+.........
T Consensus 779 mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey 855 (1177)
T KOG1025|consen 779 MPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEY 855 (1177)
T ss_pred cccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCcccccc
Confidence 999999999976 334566789999999999999998 99999999999999999999999999999876554443
Q ss_pred cc-----cccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccccc-ccccCCCcchHH
Q 005177 600 PA-----KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYN-ENEVGSSSSLQD 672 (710)
Q Consensus 600 ~~-----~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 672 (710)
.. .+.|++. |.....+++.++|||||||.+||++| |.+|+++-. ..+ +.+.+. +..+..++ -
T Consensus 856 ~~~~gK~pikwmal-e~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~-~~e------I~dlle~geRLsqPp---i 924 (1177)
T KOG1025|consen 856 SAPGGKVPIKWMAL-ESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIP-AEE------IPDLLEKGERLSQPP---I 924 (1177)
T ss_pred cccccccCcHHHHH-HHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCC-HHH------hhHHHhccccCCCCC---C
Confidence 32 2333322 55567789999999999999999999 556665322 111 111111 11121122 2
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCCC
Q 005177 673 EIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 708 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~ 708 (710)
...++..++.+||..|+..||+++++...+.++.++
T Consensus 925 CtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 925 CTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred ccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 345677888999999999999999999988776544
|
|
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.3e-33 Score=287.67 Aligned_cols=242 Identities=17% Similarity=0.179 Sum_probs=185.8
Q ss_pred chhhhhhcCCCCCccEEEEcCCCcEEEEEEeeccc---hhHHHHHHHHHHHhccC-CCCceeEEEEEEcCCceeEEEeec
Q 005177 448 STECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 448 ~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
|...+.||+||.+.|||+...+.+.+|+|++.... .....|..|+..|.+++ |.+||+|++|-..++.+||||||-
T Consensus 363 Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~G 442 (677)
T KOG0596|consen 363 YEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECG 442 (677)
T ss_pred hhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeecc
Confidence 33889999999999999999888999999987532 23667999999999996 999999999999999999999987
Q ss_pred CCCChhhhhhcC----CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC
Q 005177 524 PNGNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 599 (710)
Q Consensus 524 ~~gsL~~~l~~~----~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 599 (710)
+ -||..+|+.. .+| .+..+..|++.|+.++|.+ +|||.||||.|.|+- +|.+||+|||+|...+......
T Consensus 443 d-~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI 516 (677)
T KOG0596|consen 443 D-IDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSI 516 (677)
T ss_pred c-ccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEE-eeeEEeeeechhcccCccccce
Confidence 5 5999999862 245 6778999999999999999 999999999999887 4799999999999876543321
Q ss_pred ----cccccccCchhhhhc-----------cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccccccc
Q 005177 600 ----PAKIAWTESGEFYNA-----------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 664 (710)
Q Consensus 600 ----~~~~~~~~~~e~~~~-----------~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (710)
..++..|++||.+.. .+.+.++||||+|||+|+|+.|+.||..-... | ..+..+.++...
T Consensus 517 ~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~--~---aKl~aI~~P~~~ 591 (677)
T KOG0596|consen 517 VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQ--I---AKLHAITDPNHE 591 (677)
T ss_pred eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHH--H---HHHHhhcCCCcc
Confidence 123444556664432 23667899999999999999999998632211 1 123344454311
Q ss_pred CCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 665 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 665 ~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
...+...+ -.++++++..|+++||++||++.|++++
T Consensus 592 Iefp~~~~-~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 592 IEFPDIPE-NDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred ccccCCCC-chHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 11111111 1127899999999999999999999864
|
|
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.7e-32 Score=286.44 Aligned_cols=245 Identities=21% Similarity=0.264 Sum_probs=187.8
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
.|. ..+.+|+|+||.||+|+. .+|..||+|.+.... ...+.+.+|++.+++++|||+|++++++.+++..++|
T Consensus 26 ~f~--~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 103 (317)
T cd06635 26 LFT--DLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLV 103 (317)
T ss_pred hhh--hhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEE
Confidence 355 778899999999999985 578999999987532 2245688899999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC
Q 005177 520 YDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 596 (710)
|||++ |++.+.+.. .++|.++..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 104 ~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (317)
T cd06635 104 MEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASPAN 179 (317)
T ss_pred EeCCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCCcc
Confidence 99997 588777743 568999999999999999999998 99999999999999999999999999886543221
Q ss_pred CCCcccccccCchhhhh---ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 597 GSFPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 597 ~~~~~~~~~~~~~e~~~---~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
...+...+.+||+.. ....+.++|||||||++|||++|+.|+........ ...+....... ......
T Consensus 180 --~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~------~~~~~~~~~~~--~~~~~~ 249 (317)
T cd06635 180 --SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------LYHIAQNESPT--LQSNEW 249 (317)
T ss_pred --cccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH------HHHHHhccCCC--CCCccc
Confidence 112333466777753 34578899999999999999999998764321110 00111111000 001122
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
...+.+++.+|++.+|++||++.|+++..-..
T Consensus 250 ~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~ 281 (317)
T cd06635 250 SDYFRNFVDSCLQKIPQDRPTSEELLKHMFVL 281 (317)
T ss_pred cHHHHHHHHHHccCCcccCcCHHHHHhChhhh
Confidence 34577889999999999999999999865433
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.98 E-value=3e-32 Score=284.46 Aligned_cols=244 Identities=18% Similarity=0.198 Sum_probs=182.0
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccC-CCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.||+|+||.||++.. .+|+.||+|.+.... .....+.+|+..+.++. |||||++++++..++..++||||++.
T Consensus 8 ~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~ 87 (288)
T cd06616 8 DLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDI 87 (288)
T ss_pred HHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccC
Confidence 668899999999999985 578999999987532 34566788999999996 99999999999999999999999874
Q ss_pred CChhhhhh-------cCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-
Q 005177 526 GNLSEKIR-------TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 597 (710)
Q Consensus 526 gsL~~~l~-------~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~- 597 (710)
++.++.. ..+++....+++.+++.||+|||+.+ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 88 -~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 164 (288)
T cd06616 88 -SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAK 164 (288)
T ss_pred -CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhccCCcc
Confidence 5554321 24678888999999999999999742 899999999999999999999999999875432111
Q ss_pred CCcccccccCchhhhhcc---CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccc-cCCCcchHHH
Q 005177 598 SFPAKIAWTESGEFYNAM---KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENE-VGSSSSLQDE 673 (710)
Q Consensus 598 ~~~~~~~~~~~~e~~~~~---~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 673 (710)
....+...+.+||..... .++.++|||||||++|||++|+.|+........ ...+...... ..........
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T cd06616 165 TRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFD-----QLTQVVKGDPPILSNSEEREF 239 (288)
T ss_pred ccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHH-----HHhhhcCCCCCcCCCcCCCcc
Confidence 111122235667776554 678899999999999999999999864331110 0111111100 0001111223
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
...+.+++.+|++.+|++|||++||++.
T Consensus 240 ~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 240 SPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 4567899999999999999999999874
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.6e-32 Score=281.19 Aligned_cols=240 Identities=15% Similarity=0.191 Sum_probs=186.9
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.+|+|+||.||+|.. .+|..||+|.+.... ...+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (257)
T cd08225 4 IIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDG 83 (257)
T ss_pred EEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCC
Confidence 567899999999999986 568899999997532 2355678899999999999999999999999999999999999
Q ss_pred CChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC-ceEEcccCccccccccCCC--
Q 005177 526 GNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM-EPHLAEFGFKYLTQLADGS-- 598 (710)
Q Consensus 526 gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~-~~kl~DfGla~~~~~~~~~-- 598 (710)
++|.+++.. ..++..+..++.|+++|++|||+. +|+|+||||+||++++++ .+|++|||.+.........
T Consensus 84 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~ 160 (257)
T cd08225 84 GDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAY 160 (257)
T ss_pred CcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCCccccc
Confidence 999999864 358999999999999999999998 999999999999999875 5699999998765422111
Q ss_pred CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHH
Q 005177 599 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 678 (710)
Q Consensus 599 ~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (710)
...+...+.+||+.....++.++|||||||+++||++|+.|+..... ..... ........+. .+ .....+.
T Consensus 161 ~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-~~~~~-~~~~~~~~~~----~~---~~~~~~~ 231 (257)
T cd08225 161 TCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL-HQLVL-KICQGYFAPI----SP---NFSRDLR 231 (257)
T ss_pred ccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH-HHHHH-HHhcccCCCC----CC---CCCHHHH
Confidence 11123336678887777788999999999999999999999863321 11111 0111111111 11 1224577
Q ss_pred HHHhhcCCCCCCCCCCHHHHHHH
Q 005177 679 DVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 679 ~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+++.+|++.+|++|||+.|+++.
T Consensus 232 ~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 232 SLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred HHHHHHhccChhhCcCHHHHhhC
Confidence 88899999999999999999763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.9e-32 Score=285.10 Aligned_cols=242 Identities=15% Similarity=0.258 Sum_probs=188.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
....+|+|+||.||++.. .+|..||||++.... .....+.+|+..+++++||||+++++++..++..++||||+++++
T Consensus 24 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 103 (292)
T cd06657 24 NFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 103 (292)
T ss_pred hHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCc
Confidence 346799999999999986 689999999986533 235668889999999999999999999999999999999999999
Q ss_pred hhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Cccccc
Q 005177 528 LSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAKIA 604 (710)
Q Consensus 528 L~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~~~~ 604 (710)
|.+++.. ..++.....++.|++.|++|||+. +|+|+||||+||++++++.++|+|||++......... ...+..
T Consensus 104 L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 180 (292)
T cd06657 104 LTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTP 180 (292)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCc
Confidence 9998855 568888999999999999999998 9999999999999999999999999987654321111 111334
Q ss_pred ccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhc
Q 005177 605 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 684 (710)
Q Consensus 605 ~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 684 (710)
.+.+||......++.++|||||||++|||++|+.|+........ . ....+...+. .. ........+.+++.+|
T Consensus 181 ~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~--~-~~~~~~~~~~-~~---~~~~~~~~l~~li~~~ 253 (292)
T cd06657 181 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA--M-KMIRDNLPPK-LK---NLHKVSPSLKGFLDRL 253 (292)
T ss_pred cccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--H-HHHHhhCCcc-cC---CcccCCHHHHHHHHHH
Confidence 46778887777788899999999999999999999864322110 0 0000111111 00 0111223466788899
Q ss_pred CCCCCCCCCCHHHHHHH
Q 005177 685 TRSTPSDRPSMEEALKL 701 (710)
Q Consensus 685 l~~~p~~RPs~~evl~~ 701 (710)
++.+|.+||++.|++++
T Consensus 254 l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 254 LVRDPAQRATAAELLKH 270 (292)
T ss_pred HhCCcccCcCHHHHhcC
Confidence 99999999999999873
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.6e-32 Score=281.39 Aligned_cols=238 Identities=15% Similarity=0.122 Sum_probs=182.0
Q ss_pred hcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCCh
Q 005177 454 AARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 454 ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
||+|+||.||++.. .+|+.||+|.+.... ...+.+.+|++++++++||||+++++++...+..|+||||+++|+|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 68999999999974 679999999997532 2244567899999999999999999999999999999999999999
Q ss_pred hhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC-Ccccc
Q 005177 529 SEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-FPAKI 603 (710)
Q Consensus 529 ~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~-~~~~~ 603 (710)
.+++.. ..++.....++.|++.|+.|||+. +++||||||+||+++.++.+|++|||+++........ ...+.
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 157 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGT 157 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCC
Confidence 999864 467888899999999999999998 9999999999999999999999999998754321111 11123
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 683 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 683 (710)
..+.+||...+..++.++|||||||+++||++|+.|+........ ...+.+.........+. .....+.+++.+
T Consensus 158 ~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~li~~ 231 (277)
T cd05577 158 PGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVE---KEELKRRTLEMAVEYPD---KFSPEAKDLCEA 231 (277)
T ss_pred CCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccccc---HHHHHhccccccccCCc---cCCHHHHHHHHH
Confidence 346788887777788899999999999999999999864332110 00000100000011111 123456788999
Q ss_pred cCCCCCCCCC-----CHHHHHH
Q 005177 684 CTRSTPSDRP-----SMEEALK 700 (710)
Q Consensus 684 Cl~~~p~~RP-----s~~evl~ 700 (710)
|++.+|++|| ++.++++
T Consensus 232 ~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 232 LLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred HccCChhHccCCCcccHHHHHh
Confidence 9999999999 6666654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=7e-32 Score=290.21 Aligned_cols=254 Identities=21% Similarity=0.246 Sum_probs=190.2
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcC----
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR---- 513 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~---- 513 (710)
+.+.|. ..+.+|+|+||.||+|.. .+|+.||||.+... ....+.+.+|++++++++||||+++++++...
T Consensus 14 ~~~~y~--~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (353)
T cd07850 14 VLKRYQ--NLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLE 91 (353)
T ss_pred hhcceE--EEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcc
Confidence 345566 778999999999999985 68999999998642 22345677899999999999999999998653
Q ss_pred --CceeEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 514 --HQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 514 --~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
...|+||||+. |+|.+.+...+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 92 ~~~~~~lv~e~~~-~~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 167 (353)
T cd07850 92 EFQDVYLVMELMD-ANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART 167 (353)
T ss_pred ccCcEEEEEeccC-CCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCcccee
Confidence 35799999996 589998877788889999999999999999998 999999999999999999999999999876
Q ss_pred ccccCCCC-cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc---------c-------cc
Q 005177 592 TQLADGSF-PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI---------D-------GL 654 (710)
Q Consensus 592 ~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~---------~-------~~ 654 (710)
........ ......+++||......++.++|||||||++|||++|+.|+........+.. . ..
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (353)
T cd07850 168 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPT 247 (353)
T ss_pred CCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhh
Confidence 54321111 1133446788888888889999999999999999999999864321110000 0 00
Q ss_pred ccccccccc--------------cC---CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 655 LGEMYNENE--------------VG---SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 655 ~~~~~~~~~--------------~~---~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.....+... .. ...........+.+++.+|++.||++|||+.|+++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 248 VRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred hhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000000 00 000011223457799999999999999999999864
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.6e-32 Score=281.33 Aligned_cols=248 Identities=21% Similarity=0.240 Sum_probs=186.7
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.+|+|++|.||+|.. .+|+.||||++.... ...+.+.+|+.++++++||||+++++++..++..++||||+ +
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~ 82 (286)
T cd07832 4 ILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-P 82 (286)
T ss_pred EEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-C
Confidence 567899999999999985 578999999998643 23567889999999999999999999999999999999999 9
Q ss_pred CChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC---CC
Q 005177 526 GNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG---SF 599 (710)
Q Consensus 526 gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~---~~ 599 (710)
++|.+++.. ..++.++..++.|+++||+|||+. +|+|+||||+||+++.++.++++|||+++....... ..
T Consensus 83 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 159 (286)
T cd07832 83 SDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSH 159 (286)
T ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCcccc
Confidence 999999864 468899999999999999999998 999999999999999999999999999876543221 11
Q ss_pred cccccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCc---------------ccccccc---ccccc
Q 005177 600 PAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPIDGLL---GEMYN 660 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~---------------~~~~~~~---~~~~~ 660 (710)
..+..++.+||..... .++.++||||+||+++||+||+.|+........ |+..... ..+..
T Consensus 160 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (286)
T cd07832 160 QVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITF 239 (286)
T ss_pred ccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccC
Confidence 1234456777766443 468899999999999999999666643321110 0000000 00000
Q ss_pred ccccC--CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 661 ENEVG--SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 661 ~~~~~--~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+.... ......+....+.+++.+|++.+|++||++++++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 240 PESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred CCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00000 000011223677899999999999999999999864
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.5e-32 Score=278.59 Aligned_cols=243 Identities=21% Similarity=0.263 Sum_probs=187.4
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-------hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-------TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-------~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
..+.+|+|++|.||+|.. .+|+.||+|.+.... ...+.+.+|++.+++++||||+++++++.+.+..++|||
T Consensus 4 ~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e 83 (268)
T cd06630 4 KGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVE 83 (268)
T ss_pred ccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEe
Confidence 668899999999999984 778999999997532 124678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC-ceEEcccCccccccccCCC
Q 005177 522 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM-EPHLAEFGFKYLTQLADGS 598 (710)
Q Consensus 522 y~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~-~~kl~DfGla~~~~~~~~~ 598 (710)
|+++++|.+++.. .+++....+++.|++.||.|||+. +++||||||+||+++.++ .+||+|||.++........
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 160 (268)
T cd06630 84 WMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTG 160 (268)
T ss_pred ccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccccccccccccccc
Confidence 9999999999965 567888899999999999999998 999999999999998776 5999999998654322110
Q ss_pred ------CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHH
Q 005177 599 ------FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 672 (710)
Q Consensus 599 ------~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (710)
...+...+.+||......++.++||||+||+++||++|+.|+........ .....+..... ..+.....
T Consensus 161 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~--~~~~~~~~ 235 (268)
T cd06630 161 AGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH---LALIFKIASAT--TAPSIPEH 235 (268)
T ss_pred CCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch---HHHHHHHhccC--CCCCCchh
Confidence 01122235677887777788999999999999999999998863321110 00000110000 00111122
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 673 EIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
....+.+++.+|+..+|++||++.|+++
T Consensus 236 ~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 236 LSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred hCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 3456778999999999999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.2e-32 Score=284.69 Aligned_cols=247 Identities=19% Similarity=0.233 Sum_probs=180.6
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.||+|+||.||+|.. .+|..||+|.+..... ....+.+|++.+++++|+||+++++++.+++..++||||++ +
T Consensus 9 ~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~ 87 (291)
T cd07870 9 NLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-T 87 (291)
T ss_pred EEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-C
Confidence 678899999999999985 5789999999975432 23467789999999999999999999999999999999996 6
Q ss_pred Chhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Ccc
Q 005177 527 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPA 601 (710)
Q Consensus 527 sL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~ 601 (710)
++.+.+.. ...+.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ ...
T Consensus 88 ~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 164 (291)
T cd07870 88 DLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEV 164 (291)
T ss_pred CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCCcc
Confidence 77776643 356788888999999999999998 9999999999999999999999999998754321111 111
Q ss_pred cccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc----------cccc------ccccccccccc
Q 005177 602 KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK----------PIDG------LLGEMYNENEV 664 (710)
Q Consensus 602 ~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~----------~~~~------~~~~~~~~~~~ 664 (710)
....+.+||.... ..++.++|||||||++|||+||+.|+......... +... ...........
T Consensus 165 ~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (291)
T cd07870 165 VTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFL 244 (291)
T ss_pred ccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhcc
Confidence 2334667776654 34678899999999999999999998643221000 0000 00000000000
Q ss_pred C-CCcchH------HHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 665 G-SSSSLQ------DEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 665 ~-~~~~~~------~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
. ...... .....+.+++.+|++.||++|||+.|++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 245 PCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred ccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 0 000000 01245678899999999999999999875
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.1e-32 Score=277.47 Aligned_cols=237 Identities=16% Similarity=0.151 Sum_probs=185.3
Q ss_pred hcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCCh
Q 005177 454 AARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 454 ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
+|.|++|.||++.. .+++.||+|.+.... ...+.+.+|++++++++||||+++++++.+++..++||||+++|+|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 68999999999996 458999999997532 2356788999999999999999999999999999999999999999
Q ss_pred hhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC-Ccccccc
Q 005177 529 SEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-FPAKIAW 605 (710)
Q Consensus 529 ~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~-~~~~~~~ 605 (710)
.+++.. .+++..+..++.|++.||+|||+. +++|+||||+||+++.++.+|++|||+++........ ...+...
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~ 157 (262)
T cd05572 81 WTILRDRGLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPE 157 (262)
T ss_pred HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcC
Confidence 999975 457888899999999999999998 9999999999999999999999999998765432111 1112334
Q ss_pred cCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccc-ccccCCCcchHHHHHHHHHHHhhc
Q 005177 606 TESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYN-ENEVGSSSSLQDEIKLVLDVALLC 684 (710)
Q Consensus 606 ~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~C 684 (710)
+.+||......++.++|+||||+++|||++|+.|+....... ......+.+ ......+.. ....+.+++.+|
T Consensus 158 ~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~ 230 (262)
T cd05572 158 YVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP----MEIYNDILKGNGKLEFPNY---IDKAAKDLIKQL 230 (262)
T ss_pred ccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH----HHHHHHHhccCCCCCCCcc---cCHHHHHHHHHH
Confidence 667788777778899999999999999999999987443111 001111111 110111111 135678899999
Q ss_pred CCCCCCCCCC-----HHHHHH
Q 005177 685 TRSTPSDRPS-----MEEALK 700 (710)
Q Consensus 685 l~~~p~~RPs-----~~evl~ 700 (710)
|+.+|++||+ ++|+++
T Consensus 231 l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 231 LRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred ccCChhhCcCCcccCHHHHhc
Confidence 9999999999 677665
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.7e-32 Score=282.55 Aligned_cols=250 Identities=18% Similarity=0.204 Sum_probs=184.7
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchh---HHHHHHHHHHHhccCCCCceeEEEEEEcC--CceeE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATR---IKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYL 518 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~l 518 (710)
+|. ..+.||+|++|.||+|.. .+|+.||+|.++..... ...+.+|+.++.+++||||+++++++... +..++
T Consensus 6 ~y~--~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l 83 (293)
T cd07843 6 EYE--KLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM 83 (293)
T ss_pred hhh--hhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence 455 778999999999999986 46899999999854322 33567899999999999999999999877 88999
Q ss_pred EEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 519 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
||||++ ++|.+++.. .+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 84 v~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 159 (293)
T cd07843 84 VMEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYGSP 159 (293)
T ss_pred EehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeeccCC
Confidence 999998 599888864 368999999999999999999998 9999999999999999999999999998765432
Q ss_pred CCCC--cccccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCc---------------ccccccccc
Q 005177 596 DGSF--PAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPIDGLLGE 657 (710)
Q Consensus 596 ~~~~--~~~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~---------------~~~~~~~~~ 657 (710)
.... ......+.+||..... ..+.++||||+||++|||++|+.|+........ |.....+..
T Consensus 160 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (293)
T cd07843 160 LKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPG 239 (293)
T ss_pred ccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccch
Confidence 1111 1123345677766543 468899999999999999999988864321100 000000000
Q ss_pred cc-----cccccCCCcchHH--HHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 658 MY-----NENEVGSSSSLQD--EIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 658 ~~-----~~~~~~~~~~~~~--~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
.. ............. ....+.+++.+|++.+|++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 240 AKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred hcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 00 0000000000111 1345678999999999999999999975
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.3e-32 Score=283.61 Aligned_cols=237 Identities=16% Similarity=0.148 Sum_probs=187.1
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|++|.||++.. .+++.||+|.+.... ...+.+.+|++++++++||||+++++++.+++..++||||++
T Consensus 5 ~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 84 (290)
T cd05580 5 FIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVP 84 (290)
T ss_pred EEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCC
Confidence 567899999999999985 578999999997532 235668889999999999999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCccc
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK 602 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~ 602 (710)
+|+|.+++.. .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++....... ...+
T Consensus 85 ~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~-~~~~ 160 (290)
T cd05580 85 GGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTY-TLCG 160 (290)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCC-CCCC
Confidence 9999999865 467888899999999999999998 999999999999999999999999999876543321 1123
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
...+.+||.......+.++||||||+++|||+||+.|+....... ....+.... ...+... ...+.+++.
T Consensus 161 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~-~~~~~~~---~~~l~~li~ 230 (290)
T cd05580 161 TPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQ------IYEKILEGK-VRFPSFF---SPDAKDLIR 230 (290)
T ss_pred CccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHhcCC-ccCCccC---CHHHHHHHH
Confidence 344667787777778889999999999999999999986433110 011111111 1111111 245668889
Q ss_pred hcCCCCCCCCC-----CHHHHHH
Q 005177 683 LCTRSTPSDRP-----SMEEALK 700 (710)
Q Consensus 683 ~Cl~~~p~~RP-----s~~evl~ 700 (710)
+||+.+|++|| +++|+++
T Consensus 231 ~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 231 NLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred HHccCCHHHccCcccCCHHHHHc
Confidence 99999999999 6677654
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.7e-32 Score=286.06 Aligned_cols=248 Identities=20% Similarity=0.244 Sum_probs=186.8
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.||+|++|.||+|.. .+++.||||+++... ...+.+.+|++++++++|+||+++++++..++..++||||+++
T Consensus 5 ~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~ 84 (288)
T cd07833 5 VLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVER 84 (288)
T ss_pred EEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCC
Confidence 667899999999999986 468899999987532 2356788999999999999999999999999999999999998
Q ss_pred CChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-C--Cc
Q 005177 526 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-S--FP 600 (710)
Q Consensus 526 gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-~--~~ 600 (710)
+.+..+... ..++.....++.|+++|++|||+. +|+|||+||+||++++++.+||+|||++........ . ..
T Consensus 85 ~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~ 161 (288)
T cd07833 85 TLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDY 161 (288)
T ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccCc
Confidence 777766643 467888999999999999999998 999999999999999999999999999876543221 1 11
Q ss_pred ccccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCc-cc---------cc--ccc--ccccccccc-
Q 005177 601 AKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN-KP---------ID--GLL--GEMYNENEV- 664 (710)
Q Consensus 601 ~~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~-~~---------~~--~~~--~~~~~~~~~- 664 (710)
....++.+||+.... .++.++||||||+++|||++|+.|+........ +. .. ... .........
T Consensus 162 ~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (288)
T cd07833 162 VATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFP 241 (288)
T ss_pred ccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccC
Confidence 133456788887766 788999999999999999999988764321100 00 00 000 000000000
Q ss_pred --CCCcch-----HHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 665 --GSSSSL-----QDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 665 --~~~~~~-----~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
...... ......+.+++.+||..+|++||+++++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 242 EPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred CCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 000000 011456889999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.5e-32 Score=280.69 Aligned_cols=238 Identities=17% Similarity=0.193 Sum_probs=184.0
Q ss_pred hcCCCCCccEEEEcC-CCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCCh
Q 005177 454 AARPQSAAGCKAVLP-TGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 454 ig~g~~g~vy~~~~~-~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
+|+|+||.||+++.. +|+.+|+|.+..... ..+.+.+|++++.+++||||+++++.+.+++..++||||+++|+|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 588999999999975 599999999975432 356788899999999999999999999999999999999999999
Q ss_pred hhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC---------
Q 005177 529 SEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--------- 597 (710)
Q Consensus 529 ~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--------- 597 (710)
.++++. ..++..+..++.|+++||+|||+. +++||||+|+||++++++.+|++|||++........
T Consensus 81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 157 (265)
T cd05579 81 ASLLENVGSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKE 157 (265)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccc
Confidence 999875 568889999999999999999998 999999999999999999999999999875432211
Q ss_pred -CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHH
Q 005177 598 -SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 676 (710)
Q Consensus 598 -~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (710)
........+.+||.......+.++||||||+++||++||+.|+....... ......... ...+. .......
T Consensus 158 ~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~------~~~~~~~~~-~~~~~-~~~~~~~ 229 (265)
T cd05579 158 DKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEE------IFQNILNGK-IEWPE-DVEVSDE 229 (265)
T ss_pred ccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHhcCC-cCCCc-cccCCHH
Confidence 01112234567787776678889999999999999999999986433110 011111101 00011 0011356
Q ss_pred HHHHHhhcCCCCCCCCCCHHHHHHHH
Q 005177 677 VLDVALLCTRSTPSDRPSMEEALKLL 702 (710)
Q Consensus 677 ~~~l~~~Cl~~~p~~RPs~~evl~~L 702 (710)
+.+++.+|++.+|++|||+.++.+.|
T Consensus 230 ~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 230 AIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred HHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 77899999999999999995555444
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.7e-32 Score=274.58 Aligned_cols=242 Identities=17% Similarity=0.260 Sum_probs=191.0
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
..+.+|+|++|.||++.. .+|..+|+|++..... ..+.+.+|++.+++++||||+++++++...+..++++||+++++
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~ 83 (253)
T cd05122 4 ILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGS 83 (253)
T ss_pred eeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCc
Confidence 567899999999999997 4789999999986543 56778899999999999999999999999999999999999999
Q ss_pred hhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC-CCCcccc
Q 005177 528 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD-GSFPAKI 603 (710)
Q Consensus 528 L~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~-~~~~~~~ 603 (710)
|.+++.. .+++..+..++.|+++|++|||.. +++||||||+||++++++.++|+|||.+....... .....+.
T Consensus 84 L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~ 160 (253)
T cd05122 84 LKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGT 160 (253)
T ss_pred HHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeeccccccccccccccceecC
Confidence 9999865 468899999999999999999997 99999999999999999999999999987654322 1112233
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 683 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 683 (710)
..+.+||+......+.++||||||++++||++|+.|+........... ... ......... ......+.+++.+
T Consensus 161 ~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~---~~~-~~~~~~~~~---~~~~~~~~~~i~~ 233 (253)
T cd05122 161 PYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFK---IAT-NGPPGLRNP---EKWSDEFKDFLKK 233 (253)
T ss_pred CcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHH---HHh-cCCCCcCcc---cccCHHHHHHHHH
Confidence 346778888777788999999999999999999998864321111000 000 000001101 1113457788899
Q ss_pred cCCCCCCCCCCHHHHHHH
Q 005177 684 CTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 684 Cl~~~p~~RPs~~evl~~ 701 (710)
|++.||++|||+.|++++
T Consensus 234 ~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 234 CLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred HccCChhhCCCHHHHhcC
Confidence 999999999999999753
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.7e-32 Score=278.87 Aligned_cols=240 Identities=16% Similarity=0.125 Sum_probs=188.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.+|.|+||.||++.. .+|..||+|.+.... ...+.+.+|++.+++++||||+++++++.+++..++||||++
T Consensus 4 ~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 83 (258)
T cd05578 4 LLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLL 83 (258)
T ss_pred EEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCC
Confidence 567899999999999986 468999999997532 346778899999999999999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-CCcc
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SFPA 601 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-~~~~ 601 (710)
+++|.+++.. .+++.....++.|+++||.|||+. +|+|+||||+||++++++.++++|||++........ ....
T Consensus 84 ~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~ 160 (258)
T cd05578 84 GGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTS 160 (258)
T ss_pred CCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCCccccccC
Confidence 9999999965 467888899999999999999998 999999999999999999999999999875432211 1111
Q ss_pred cccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHH
Q 005177 602 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 681 (710)
Q Consensus 602 ~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 681 (710)
+...+.+||+......+.++||||||+++|||++|+.|+............. ...... ...+. .....+.+++
T Consensus 161 ~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~---~~~~~~-~~~~~---~~~~~~~~~i 233 (258)
T cd05578 161 GTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRA---KQETAD-VLYPA---TWSTEAIDAI 233 (258)
T ss_pred CChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHH---Hhcccc-ccCcc---cCcHHHHHHH
Confidence 2334667888877778999999999999999999999987443210000000 110011 11111 1235677889
Q ss_pred hhcCCCCCCCCCCH--HHHH
Q 005177 682 LLCTRSTPSDRPSM--EEAL 699 (710)
Q Consensus 682 ~~Cl~~~p~~RPs~--~evl 699 (710)
.+|+..||.+||++ +|+.
T Consensus 234 ~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 234 NKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred HHHccCChhHcCCccHHHHh
Confidence 99999999999999 6654
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=4e-32 Score=284.44 Aligned_cols=247 Identities=19% Similarity=0.205 Sum_probs=181.3
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccC-CCCceeEEEEEEcCCc-----eeEE
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQ-----AYLL 519 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~-----~~lv 519 (710)
..+.+|+|+||.||+|.. .+|+.||||.++.... ....+.+|++++++++ ||||+++++++...+. .|+|
T Consensus 5 ~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv 84 (295)
T cd07837 5 KLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLV 84 (295)
T ss_pred EeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEE
Confidence 678899999999999985 5799999999875422 2356788999999996 6999999999987665 8999
Q ss_pred EeecCCCChhhhhhc-------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC-CCceEEcccCcccc
Q 005177 520 YDYLPNGNLSEKIRT-------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-NMEPHLAEFGFKYL 591 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~-------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~-~~~~kl~DfGla~~ 591 (710)
|||+++ +|.+++.. ..++.....++.||++||+|||+. +|+||||||+||+++. ++.+||+|||+++.
T Consensus 85 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~ 160 (295)
T cd07837 85 FEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLGLGRA 160 (295)
T ss_pred eeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeeccccee
Confidence 999985 89888753 357888999999999999999998 9999999999999998 89999999999875
Q ss_pred ccccCCC--CcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc---------cccccccc
Q 005177 592 TQLADGS--FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI---------DGLLGEMY 659 (710)
Q Consensus 592 ~~~~~~~--~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~---------~~~~~~~~ 659 (710)
....... ......++.+||+... ..++.++|||||||++|||+||+.|+........... ........
T Consensus 161 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T cd07837 161 FSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVS 240 (295)
T ss_pred cCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchh
Confidence 4322111 1112334667786643 4568899999999999999999988864332111000 00000000
Q ss_pred ccc-----ccCCCcc----hHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 660 NEN-----EVGSSSS----LQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 660 ~~~-----~~~~~~~----~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
... ....... .+.....+.+++.+|++.+|++||++.|++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 241 KLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred hccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000 0000000 0122356778999999999999999999875
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.5e-32 Score=279.25 Aligned_cols=239 Identities=12% Similarity=0.061 Sum_probs=178.2
Q ss_pred hhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHH---HHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 453 EAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFI---TRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~---~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
+||+|+||.||++.. .+|+.||+|.+..... ....+.+|. +.++...||||+++++++.+++..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 479999999999985 5689999999875321 122233343 33445679999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCccc
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK 602 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~ 602 (710)
+|+|.+++.. .+++..+..++.|+++|++|||+. +|+||||||+||++++++.+|++|||+++...........+
T Consensus 81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 157 (278)
T cd05606 81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG 157 (278)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCC
Confidence 9999998865 468999999999999999999998 99999999999999999999999999987543222222223
Q ss_pred ccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHH
Q 005177 603 IAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 681 (710)
Q Consensus 603 ~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 681 (710)
...+.+||.... ..++.++||||+||++|||++|+.|+.+............. ...... . +. .....+.+++
T Consensus 158 ~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~-~--~~---~~s~~~~~li 230 (278)
T cd05606 158 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT-LTMAVE-L--PD---SFSPELRSLL 230 (278)
T ss_pred CcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHh-hccCCC-C--CC---cCCHHHHHHH
Confidence 344667787653 35788999999999999999999998744211100000000 000000 1 11 1235677888
Q ss_pred hhcCCCCCCCCC-----CHHHHHHH
Q 005177 682 LLCTRSTPSDRP-----SMEEALKL 701 (710)
Q Consensus 682 ~~Cl~~~p~~RP-----s~~evl~~ 701 (710)
.+|+..+|++|| ++.|++++
T Consensus 231 ~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 231 EGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred HHHhhcCHHhccCCCCCCHHHHHhC
Confidence 999999999999 99998863
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.1e-32 Score=277.94 Aligned_cols=238 Identities=19% Similarity=0.180 Sum_probs=190.8
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+-+|+|.|..|-.|.+ -+|..||||++.+... ....+.+|++.|+-++|||||+||.+......+|||.|.-.+
T Consensus 22 LekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~ 101 (864)
T KOG4717|consen 22 LEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDG 101 (864)
T ss_pred hhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCC
Confidence 667899999999988873 7999999999987543 355677899999999999999999999999999999999999
Q ss_pred CChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec-CCCceEEcccCccccccccC-C-CC
Q 005177 526 GNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-ENMEPHLAEFGFKYLTQLAD-G-SF 599 (710)
Q Consensus 526 gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~-~~~~~kl~DfGla~~~~~~~-~-~~ 599 (710)
|+|+|+|-. .+......++..||..|+.|+|+. .+|||||||+||..- .-|-+|+.|||++-.+.... - ..
T Consensus 102 GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~Ts 178 (864)
T KOG4717|consen 102 GDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTTS 178 (864)
T ss_pred chHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCCcchhhcc
Confidence 999999954 567788899999999999999998 899999999998776 45889999999986554322 1 12
Q ss_pred cccccccCchhhhhccCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 678 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~-~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (710)
.+..+ |.+||+..+..| -+++||||+|||||-|+.|+.||....+-+. +-.++|-. ...+.-...++.
T Consensus 179 CGSLA-YSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET------LTmImDCK----YtvPshvS~eCr 247 (864)
T KOG4717|consen 179 CGSLA-YSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET------LTMIMDCK----YTVPSHVSKECR 247 (864)
T ss_pred cchhh-ccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh------hhhhhccc----ccCchhhhHHHH
Confidence 23455 667787776655 4568999999999999999999986544322 22233322 111223456788
Q ss_pred HHHhhcCCCCCCCCCCHHHHHHH
Q 005177 679 DVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 679 ~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+++..++..||++|.+.+||+..
T Consensus 248 dLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 248 DLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred HHHHHHHhcCchhhccHHHHhcc
Confidence 99999999999999999999864
|
|
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.5e-32 Score=279.91 Aligned_cols=247 Identities=19% Similarity=0.164 Sum_probs=180.8
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccC-CCCceeEEEEEEcC--CceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVR-HKNLIRLLGFCYNR--HQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~--~~~~lv~Ey~ 523 (710)
..+.+|+|+||.||+|.. .++..||+|+++... .......+|+..+.++. ||||+++++++.++ +..++||||+
T Consensus 3 ~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~ 82 (282)
T cd07831 3 ILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELM 82 (282)
T ss_pred eEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecC
Confidence 457799999999999985 578999999987532 22333456788888885 99999999999987 8899999999
Q ss_pred CCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC-C
Q 005177 524 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-F 599 (710)
Q Consensus 524 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~-~ 599 (710)
+ |++.+.+.. ..+|.+...++.|+++||+|||+. +|+||||||+||+++. +.+||+|||+++........ .
T Consensus 83 ~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~~ 157 (282)
T cd07831 83 D-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYTE 157 (282)
T ss_pred C-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccccCCCcCC
Confidence 7 588888764 468999999999999999999998 9999999999999999 99999999998765322111 1
Q ss_pred cccccccCchhhhh-ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc--cc-------cccc---c--ccccccccc
Q 005177 600 PAKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN--KP-------IDGL---L--GEMYNENEV 664 (710)
Q Consensus 600 ~~~~~~~~~~e~~~-~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~--~~-------~~~~---~--~~~~~~~~~ 664 (710)
..+..++.+||... ...++.++|||||||++|||++|+.|+........ +. .... . ....+....
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (282)
T cd07831 158 YISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFP 237 (282)
T ss_pred CCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCc
Confidence 11334466777654 34568899999999999999999988864321100 00 0000 0 000000000
Q ss_pred -CCCcc----hHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 665 -GSSSS----LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 665 -~~~~~----~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..... .......+.+++.+|++.+|++||+++|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 238 SKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred ccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 00000 11234678899999999999999999999763
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.2e-32 Score=277.10 Aligned_cols=239 Identities=15% Similarity=0.120 Sum_probs=177.2
Q ss_pred hhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHH-HHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 452 EEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFIT-RIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~-~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
+.+|+|++|.||+|.. .+|+.||||.+..... ....+..|.. .....+||||+++++++..++..++||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 4589999999999986 5689999999975321 1222333433 34556899999999999999999999999999
Q ss_pred CChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCcccc
Q 005177 526 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKI 603 (710)
Q Consensus 526 gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 603 (710)
|+|.+++.. ..++....+++.|++.||.|||+. +|+||||||+||+++.++.+|++|||+++...... .. .+.
T Consensus 82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-~~-~~~ 156 (260)
T cd05611 82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENK-KF-VGT 156 (260)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccccc-cC-CCC
Confidence 999999965 567888899999999999999998 99999999999999999999999999987543211 11 122
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 683 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 683 (710)
..+.+||......++.++||||||+++|||+||+.|+........ . ..+..................+.+++.+
T Consensus 157 ~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 230 (260)
T cd05611 157 PDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAV--F----DNILSRRINWPEEVKEFCSPEAVDLINR 230 (260)
T ss_pred cCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHH--H----HHHHhcccCCCCcccccCCHHHHHHHHH
Confidence 335677777666688999999999999999999999864322110 0 0000000000001111223567899999
Q ss_pred cCCCCCCCCCCHHHHHHH
Q 005177 684 CTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 684 Cl~~~p~~RPs~~evl~~ 701 (710)
|++.+|++||++.++.+.
T Consensus 231 ~l~~~p~~R~~~~~~~~~ 248 (260)
T cd05611 231 LLCMDPAKRLGANGYQEI 248 (260)
T ss_pred HccCCHHHccCCCcHHHH
Confidence 999999999977544443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-32 Score=282.67 Aligned_cols=247 Identities=20% Similarity=0.249 Sum_probs=184.1
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.+|+|++|.||+|.. .+|..||+|++..... ..+.+.+|++.+++++||||+++++++.+++..++||||++
T Consensus 3 ~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~- 81 (283)
T cd07835 3 KVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD- 81 (283)
T ss_pred hheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-
Confidence 567899999999999985 5799999999975432 23567889999999999999999999999999999999995
Q ss_pred CChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC--
Q 005177 526 GNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF-- 599 (710)
Q Consensus 526 gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~-- 599 (710)
++|.+++.. ..++..+..++.|+++||+|||+. +++||||+|+||+++.++.++|+|||+++.........
T Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 158 (283)
T cd07835 82 LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTH 158 (283)
T ss_pred cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCc
Confidence 689998865 368999999999999999999998 99999999999999999999999999987543221111
Q ss_pred cccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc---------------ccccccccccccccc
Q 005177 600 PAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPIDGLLGEMYNENE 663 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~---------------~~~~~~~~~~~~~~~ 663 (710)
......+.+||+... ..++.++|||||||++|||+||+.|+........ |.......+......
T Consensus 159 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd07835 159 EVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFP 238 (283)
T ss_pred cccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcc
Confidence 112334667786544 3468889999999999999999998864322100 000000000000000
Q ss_pred cCCCcc----hHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 664 VGSSSS----LQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 664 ~~~~~~----~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
...... .......+.+++.+|++.+|++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 239 KWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred cccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000000 1112246778999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-31 Score=272.78 Aligned_cols=242 Identities=20% Similarity=0.252 Sum_probs=191.4
Q ss_pred hhhhhcCCCCCccEEEEcC-CCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcC--CceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~Ey~ 523 (710)
..+.+|+|++|.||+|... +|+.|++|.+.... ...+.+.+|++.+++++||||+++++++.+. +..++||||+
T Consensus 4 ~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 83 (260)
T cd06606 4 RGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYV 83 (260)
T ss_pred eeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEec
Confidence 5678999999999999864 79999999998654 3467788999999999999999999999988 8899999999
Q ss_pred CCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC----
Q 005177 524 PNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG---- 597 (710)
Q Consensus 524 ~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~---- 597 (710)
++++|.+++.. ..++..+..++.|+++|++|||+. +++|+||+|+||+++.++.++|+|||.+........
T Consensus 84 ~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 160 (260)
T cd06606 84 SGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGT 160 (260)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEecccccccccc
Confidence 99999999875 568999999999999999999998 999999999999999999999999999876543321
Q ss_pred CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 598 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 598 ~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
........+.+||.......+.++||||||++++||++|+.|+.......... ......... ..........+
T Consensus 161 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~-----~~~~~~~~~--~~~~~~~~~~l 233 (260)
T cd06606 161 GSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAAL-----YKIGSSGEP--PEIPEHLSEEA 233 (260)
T ss_pred cCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHH-----HhccccCCC--cCCCcccCHHH
Confidence 11122333567788777778999999999999999999999987443111000 011000000 00111123567
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 678 LDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+++.+|++.+|++||++.|+++.
T Consensus 234 ~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 234 KDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred HHHHHHhCcCChhhCCCHHHHhhC
Confidence 788899999999999999999763
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-31 Score=283.27 Aligned_cols=244 Identities=17% Similarity=0.146 Sum_probs=177.4
Q ss_pred hcCCCCCccEEEEcCCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChhh
Q 005177 454 AARPQSAAGCKAVLPTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSE 530 (710)
Q Consensus 454 ig~g~~g~vy~~~~~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~~ 530 (710)
.|.|+++.+|++.. +|+.||||++... ....+.+.+|++.+++++||||+++++++.+.+..+++|||+++|+|.+
T Consensus 10 ~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 88 (314)
T cd08216 10 FEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCED 88 (314)
T ss_pred hcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHH
Confidence 34444555555554 7999999999754 3345678999999999999999999999999999999999999999999
Q ss_pred hhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC---------
Q 005177 531 KIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--------- 597 (710)
Q Consensus 531 ~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--------- 597 (710)
++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+|++|||.+........
T Consensus 89 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~ 165 (314)
T cd08216 89 LLKTHFPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFP 165 (314)
T ss_pred HHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccccccccccccc
Confidence 9875 356778889999999999999998 999999999999999999999999998764321111
Q ss_pred CCcccccccCchhhhhc--cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccc--cccc----------------ccc
Q 005177 598 SFPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP--IDGL----------------LGE 657 (710)
Q Consensus 598 ~~~~~~~~~~~~e~~~~--~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~--~~~~----------------~~~ 657 (710)
........+.+||+... ..++.++|||||||++|||++|+.||.......... .... ..+
T Consensus 166 ~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (314)
T cd08216 166 KSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQ 245 (314)
T ss_pred ccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCc
Confidence 00112223566777654 357889999999999999999999987432110000 0000 000
Q ss_pred ----ccccccc--CCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 658 ----MYNENEV--GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 658 ----~~~~~~~--~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..++... ............+.+++.+||..||++|||++|++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 246 SRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred ccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 0000000 0001112234567789999999999999999999874
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-31 Score=282.93 Aligned_cols=245 Identities=20% Similarity=0.241 Sum_probs=181.5
Q ss_pred hhhcCC--CCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 452 EEAARP--QSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 452 ~~ig~g--~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..||+| +||.||++.. .+|+.||||.+.... ...+.+.+|+.+++.++|||||+++++|..++..++||||+++
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 567777 8889999985 689999999987532 2356788899999999999999999999999999999999999
Q ss_pred CChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC---
Q 005177 526 GNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--- 598 (710)
Q Consensus 526 gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--- 598 (710)
|++.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+|++|||.+.........
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 999999875 367888889999999999999988 9999999999999999999999999854322111000
Q ss_pred ------CcccccccCchhhhhc--cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc----------ccc-c------
Q 005177 599 ------FPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK----------PID-G------ 653 (710)
Q Consensus 599 ------~~~~~~~~~~~e~~~~--~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~----------~~~-~------ 653 (710)
.......+.+||+... ..++.++|||||||++|||++|+.|+.+....... +.. .
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEE 240 (328)
T ss_pred cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhh
Confidence 0111222556777654 34678999999999999999999998643211000 000 0
Q ss_pred -------------ccc---------ccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 654 -------------LLG---------EMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 654 -------------~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
... .+.... . ..+........+.+++.+|++.||++|||+.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 241 SRMKNSQSGVDSGIGESVVAAGMTQTMTSER-L-RTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred hhhccchhhhhcccccchhcccccccccccc-c-cchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 000 000000 0 011122344678899999999999999999999863
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=284.20 Aligned_cols=240 Identities=17% Similarity=0.126 Sum_probs=187.0
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.+|+|++|.||++.. .+|..||+|.+..... ..+.+.+|++.+.+++||||+++++++.+++..++||||++
T Consensus 5 ~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 84 (316)
T cd05574 5 KIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCP 84 (316)
T ss_pred EeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecC
Confidence 667899999999999986 4589999999976432 34568889999999999999999999999999999999999
Q ss_pred CCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC-
Q 005177 525 NGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF- 599 (710)
Q Consensus 525 ~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~- 599 (710)
+++|.+++.. .+++.....++.|+++||+|||.. +++||||||+||+++.++.++|+|||++..........
T Consensus 85 ~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (316)
T cd05574 85 GGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVS 161 (316)
T ss_pred CCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhcccccccccc
Confidence 9999999864 467888899999999999999998 99999999999999999999999999876542111000
Q ss_pred ------------------------------cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc
Q 005177 600 ------------------------------PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK 649 (710)
Q Consensus 600 ------------------------------~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~ 649 (710)
..+...+.+||+.....++.++|||||||++|||++|+.|+........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~- 240 (316)
T cd05574 162 KALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDET- 240 (316)
T ss_pred cccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHH-
Confidence 0112336678887777788899999999999999999999864332111
Q ss_pred cccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCC----HHHHHH
Q 005177 650 PIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPS----MEEALK 700 (710)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs----~~evl~ 700 (710)
..++.+.. .. .+........+.+++.+|++.+|++||| ++|+++
T Consensus 241 -----~~~~~~~~-~~-~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 241 -----FSNILKKE-VT-FPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred -----HHHHhcCC-cc-CCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 11111111 11 0111113456788999999999999999 666665
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-32 Score=262.60 Aligned_cols=243 Identities=16% Similarity=0.184 Sum_probs=178.6
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhc-cCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGT-VRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~-l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
....+|.|..|.|.|+.. .+|..+|||.+.... ...+.+...+.++.+ -..|.||+-+|||..+..++++||.|..
T Consensus 96 ~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~ 175 (391)
T KOG0983|consen 96 NLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST 175 (391)
T ss_pred hHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH
Confidence 567899999999999986 679999999998642 233444444555443 3479999999999999999999999863
Q ss_pred CChhhhhhc-CCCHHHH--HHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccc-cccCCCCcc
Q 005177 526 GNLSEKIRT-KRDWAAK--YKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT-QLADGSFPA 601 (710)
Q Consensus 526 gsL~~~l~~-~~~~~~~--~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~-~~~~~~~~~ 601 (710)
..+.+++. ..+.+++ -++...+.+||.||.+.+ +|||||+||+|||+|+.|.+|+||||++... .....+.++
T Consensus 176 -C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsA 252 (391)
T KOG0983|consen 176 -CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSA 252 (391)
T ss_pred -HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeeccccccccc
Confidence 55665554 3344444 488889999999999875 9999999999999999999999999998654 333333334
Q ss_pred cccccCchhhhh---ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHH
Q 005177 602 KIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 678 (710)
Q Consensus 602 ~~~~~~~~e~~~---~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (710)
+.+.|++||.+. ..+|+.++||||||+.++||+||+.|+.+-... .+.+..+.+..+.. -+........+.
T Consensus 253 GC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td-----Fe~ltkvln~ePP~-L~~~~gFSp~F~ 326 (391)
T KOG0983|consen 253 GCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD-----FEVLTKVLNEEPPL-LPGHMGFSPDFQ 326 (391)
T ss_pred CCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc-----HHHHHHHHhcCCCC-CCcccCcCHHHH
Confidence 444466666543 446889999999999999999999998742211 11223333332211 111122557788
Q ss_pred HHHhhcCCCCCCCCCCHHHHHHH
Q 005177 679 DVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 679 ~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+++..|+.+|+.+||...+++++
T Consensus 327 ~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 327 SFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred HHHHHHhhcCcccCcchHHHhcC
Confidence 89999999999999999988764
|
|
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.9e-32 Score=284.20 Aligned_cols=258 Identities=19% Similarity=0.272 Sum_probs=184.8
Q ss_pred hhhhhhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcC
Q 005177 438 TANDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNR 513 (710)
Q Consensus 438 ~~~~~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~ 513 (710)
...+..+.|. ....+|+|+||.||+|.. .+|+.||||.+..... ....+.+|++++++++||||++++++|...
T Consensus 6 ~~~~~~~~y~--~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 83 (310)
T cd07865 6 PFCDEVSKYE--KLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTK 83 (310)
T ss_pred cccchhhheE--EEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecc
Confidence 3344455566 778999999999999985 5799999999875321 233456799999999999999999998765
Q ss_pred C--------ceeEEEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceE
Q 005177 514 H--------QAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 582 (710)
Q Consensus 514 ~--------~~~lv~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~k 582 (710)
+ ..++||||+. +++.+.+.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~k 159 (310)
T cd07865 84 ATPYNRYKGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILK 159 (310)
T ss_pred cccccCCCceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEE
Confidence 4 3599999997 488887765 468899999999999999999998 999999999999999999999
Q ss_pred EcccCccccccccCCC------CcccccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc---
Q 005177 583 LAEFGFKYLTQLADGS------FPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID--- 652 (710)
Q Consensus 583 l~DfGla~~~~~~~~~------~~~~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~--- 652 (710)
|+|||++......... .......+.+||..... .++.++|||||||++|||+||+.|+............
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~ 239 (310)
T cd07865 160 LADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQL 239 (310)
T ss_pred ECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 9999998754322111 11122335677866543 4678899999999999999999887643211100000
Q ss_pred ------ccc-----cccccccccCC--CcchHH------HHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 653 ------GLL-----GEMYNENEVGS--SSSLQD------EIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 653 ------~~~-----~~~~~~~~~~~--~~~~~~------~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
... ....+...... ...... ....+.+++.+|+..||++|||++|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 240 CGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred hCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 000 00000000000 000000 12356789999999999999999999753
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-33 Score=268.94 Aligned_cols=242 Identities=16% Similarity=0.168 Sum_probs=179.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHH-HhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITR-IGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~-l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
+...||.|.||+|+|..+ ++|+.+|||+++... ..++.+..|.+. ++.=+.||||+++|.+..++..+++||.|.
T Consensus 68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd- 146 (361)
T KOG1006|consen 68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD- 146 (361)
T ss_pred HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-
Confidence 678899999999999986 889999999998743 345667777765 445568999999999999999999999997
Q ss_pred CChhhhhhc-------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc--C
Q 005177 526 GNLSEKIRT-------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA--D 596 (710)
Q Consensus 526 gsL~~~l~~-------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~--~ 596 (710)
.|++.+.+. ..+..-.-+|..-+.+||.||.... .|||||+||+|||+|..|.+|+||||++.-.... .
T Consensus 147 ~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAk 224 (361)
T KOG1006|consen 147 ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAK 224 (361)
T ss_pred hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHHHHHh
Confidence 477665432 3455555677888899999998764 8999999999999999999999999987643211 1
Q ss_pred CCCcccccccCchhhhh-cc-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccc--cCCCcchHH
Q 005177 597 GSFPAKIAWTESGEFYN-AM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENE--VGSSSSLQD 672 (710)
Q Consensus 597 ~~~~~~~~~~~~~e~~~-~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 672 (710)
+...+..+|+ +||... .. .++.++||||+|++|+|+.||+.|+....+. .+.+.+++...+ +..+....+
T Consensus 225 T~daGCrpYm-APERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~sv-----feql~~Vv~gdpp~l~~~~~~~~ 298 (361)
T KOG1006|consen 225 TVDAGCRPYM-APERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSV-----FEQLCQVVIGDPPILLFDKECVH 298 (361)
T ss_pred hhccCCcccc-ChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHH-----HHHHHHHHcCCCCeecCcccccc
Confidence 1222345544 455443 33 4899999999999999999999998643321 122233333221 111222233
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 673 EIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
....+..++-.|+-+|-++||+..++.+
T Consensus 299 ~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 299 YSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred cCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 4567888888999999999999988654
|
|
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.7e-32 Score=279.87 Aligned_cols=247 Identities=19% Similarity=0.269 Sum_probs=184.7
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.+|.|++|.||+|+. .+|..||||.++.... ..+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~- 82 (284)
T cd07836 4 QLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDK- 82 (284)
T ss_pred EeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCc-
Confidence 668899999999999996 5789999999976432 345677899999999999999999999999999999999984
Q ss_pred Chhhhhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC--
Q 005177 527 NLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF-- 599 (710)
Q Consensus 527 sL~~~l~~-----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~-- 599 (710)
+|.+++.. .+++....+++.|+++||+|||+. +|+||||||+||++++++.+|++|||+++.........
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~ 159 (284)
T cd07836 83 DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSN 159 (284)
T ss_pred cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcccccc
Confidence 88888754 368899999999999999999988 99999999999999999999999999987543221111
Q ss_pred cccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccc---------ccccc------cccccccc
Q 005177 600 PAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP---------IDGLL------GEMYNENE 663 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~---------~~~~~------~~~~~~~~ 663 (710)
.....++.+||.... ..++.++|||||||++|||+||+.|+.+........ ..... .......+
T Consensus 160 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd07836 160 EVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFP 239 (284)
T ss_pred ccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhccccc
Confidence 112344677887644 346888999999999999999999886443211000 00000 00000000
Q ss_pred cCCCcc----hHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 664 VGSSSS----LQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 664 ~~~~~~----~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
...... .+.....+.+++.+|++.||++||++.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 240 RYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred CCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000000 0112345678999999999999999999875
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-32 Score=289.71 Aligned_cols=252 Identities=20% Similarity=0.274 Sum_probs=185.2
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEcCC-----c
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH-----Q 515 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-----~ 515 (710)
++|. ..+.+|+|++|.||+|.. .+|+.||||.+... ......+.+|++++++++||||+++++++...+ .
T Consensus 5 ~~y~--i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 5 PRYQ--NLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred cceE--EEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 3455 678999999999999984 67999999998642 223456778999999999999999999876543 5
Q ss_pred eeEEEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccc
Q 005177 516 AYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 594 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~ 594 (710)
.++||||++ +++.+.+.. .+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~ 158 (336)
T cd07849 83 VYIVQELME-TDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARIADP 158 (336)
T ss_pred EEEEehhcc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccceeeccc
Confidence 799999997 488888765 578899999999999999999998 999999999999999999999999999876432
Q ss_pred cCCCC-----cccccccCchhhhh-ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccc---------ccccccccc
Q 005177 595 ADGSF-----PAKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP---------IDGLLGEMY 659 (710)
Q Consensus 595 ~~~~~-----~~~~~~~~~~e~~~-~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~---------~~~~~~~~~ 659 (710)
..... ..+..++.+||... ...++.++||||+||++|||+||+.|+.+......+. ..+....+.
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (336)
T cd07849 159 EHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCII 238 (336)
T ss_pred cccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhh
Confidence 21110 11233466777654 3467889999999999999999998886432110000 000000000
Q ss_pred cc--------cccCCCcc----hHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 660 NE--------NEVGSSSS----LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 660 ~~--------~~~~~~~~----~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+. ........ .+.....+.+++.+|++.+|++|||+.|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 239 SLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred chhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 00000000 11223567899999999999999999999886
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-31 Score=273.81 Aligned_cols=240 Identities=17% Similarity=0.192 Sum_probs=191.1
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.+|+|++|.||++.. .+|..+|+|.+.... .....+.+|++.+++++||||+++++++.+.+..++||||+++
T Consensus 4 ~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (256)
T cd08530 4 VLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPF 83 (256)
T ss_pred EeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCC
Confidence 567899999999999974 678899999997532 3355677899999999999999999999999999999999999
Q ss_pred CChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC
Q 005177 526 GNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 599 (710)
Q Consensus 526 gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 599 (710)
++|.+++.. ..++.....++.|+++|++|||+. +++|+||||+||++++++.+|++|||+++.........
T Consensus 84 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~ 160 (256)
T cd08530 84 GDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKT 160 (256)
T ss_pred CCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccCCccc
Confidence 999998854 467888999999999999999998 99999999999999999999999999987764332222
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 679 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (710)
..+...+.+||......++.++|+||+|+++|||++|+.|+....... . ........ . +.........+.+
T Consensus 161 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~---~---~~~~~~~~-~--~~~~~~~~~~~~~ 231 (256)
T cd08530 161 QIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD---L---RYKVQRGK-Y--PPIPPIYSQDLQN 231 (256)
T ss_pred ccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---H---HHHHhcCC-C--CCCchhhCHHHHH
Confidence 223445678888877788889999999999999999999986432110 0 00111111 1 1111233456789
Q ss_pred HHhhcCCCCCCCCCCHHHHHHH
Q 005177 680 VALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 680 l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
++.+|+..+|++||++.|+++.
T Consensus 232 li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 232 FIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred HHHHHcCCCcccCCCHHHHhcC
Confidence 9999999999999999999763
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-32 Score=265.81 Aligned_cols=252 Identities=21% Similarity=0.261 Sum_probs=185.6
Q ss_pred CCchhhhhhcCCCCCccEEEEcCC-----CcEEEEEEeeccchh---HHHHHHHHHHHhccCCCCceeEEEEEEc-CCce
Q 005177 446 FNSTECEEAARPQSAAGCKAVLPT-----GITVSVKKIEWGATR---IKIVSEFITRIGTVRHKNLIRLLGFCYN-RHQA 516 (710)
Q Consensus 446 ~~~~~~~~ig~g~~g~vy~~~~~~-----g~~vAvK~l~~~~~~---~~~~~~e~~~l~~l~H~niv~l~g~~~~-~~~~ 516 (710)
|.|.....||+|.||.||||+-.+ .+.+|+|+++..... .....+|+.+++.++|||||.|..++.+ +..+
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 334488899999999999997422 347999999864321 4567789999999999999999999877 7789
Q ss_pred eEEEeecCCCChhhhhhc-------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC----CceEEcc
Q 005177 517 YLLYDYLPNGNLSEKIRT-------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN----MEPHLAE 585 (710)
Q Consensus 517 ~lv~Ey~~~gsL~~~l~~-------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~----~~~kl~D 585 (710)
++++||.+. ||.+.|+- .++-.....|..||..|+.|||+. -|+|||+||+|||+..+ |.+||+|
T Consensus 104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEeec
Confidence 999999997 99998864 335556789999999999999998 89999999999999888 8999999
Q ss_pred cCccccccccCCC-----CcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCC-CCcc-ccc-----
Q 005177 586 FGFKYLTQLADGS-----FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSS-LQNK-PID----- 652 (710)
Q Consensus 586 fGla~~~~~~~~~-----~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~-~~~~-~~~----- 652 (710)
+|++|+....-.. ....+-||.+||...+ ..|+.++||||.|||+.||+|-++.|.+... .... ++.
T Consensus 180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~ 259 (438)
T KOG0666|consen 180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLD 259 (438)
T ss_pred ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHH
Confidence 9999987543211 1224568999987765 4588889999999999999998776663321 1111 111
Q ss_pred ---ccccccccccccC--CCcc-----------------hHHH-------HHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 653 ---GLLGEMYNENEVG--SSSS-----------------LQDE-------IKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 653 ---~~~~~~~~~~~~~--~~~~-----------------~~~~-------~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+.++.-.+..|.. .-+. .... .+..+++..+++..||.+|.|++++++.
T Consensus 260 rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh 337 (438)
T KOG0666|consen 260 RIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEH 337 (438)
T ss_pred HHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcc
Confidence 1111111111110 0000 0110 1236789999999999999999999874
|
|
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.6e-32 Score=283.10 Aligned_cols=243 Identities=16% Similarity=0.187 Sum_probs=178.8
Q ss_pred hhhhhcCCCCCccEEEEcC-CCcEEEEEEeeccc--hhHHHHHHHHHHHhccC-CCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA--TRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.+|+|++|.||+|... +|..||||.++... .....+.+|++.+.+.. ||||++++++|.++...++||||++
T Consensus 19 ~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~- 97 (296)
T cd06618 19 NLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMS- 97 (296)
T ss_pred eeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccC-
Confidence 6789999999999999975 49999999997542 23445566777666665 9999999999999999999999986
Q ss_pred CChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC-cc
Q 005177 526 GNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF-PA 601 (710)
Q Consensus 526 gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~-~~ 601 (710)
+++.+.+.. .+++..+.+++.|+++|++|||+. ++|+||||||+||++++++.+||+|||+++......... ..
T Consensus 98 ~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~~~~ 175 (296)
T cd06618 98 TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSA 175 (296)
T ss_pred cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccchhccCCCcccCCC
Confidence 466665543 578889999999999999999973 289999999999999999999999999987543211111 11
Q ss_pred cccccCchhhhhcc----CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 602 KIAWTESGEFYNAM----KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 602 ~~~~~~~~e~~~~~----~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
+...+.+||..... .++.++|||||||++|||++|+.|+........ ............ .+........+
T Consensus 176 ~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~l 249 (296)
T cd06618 176 GCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFE-----VLTKILQEEPPS-LPPNEGFSPDF 249 (296)
T ss_pred CCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHH-----HHHHHhcCCCCC-CCCCCCCCHHH
Confidence 22235667776544 377899999999999999999999864221100 011111111000 00001123457
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 678 LDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+++.+|++.||++||++++++++
T Consensus 250 ~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 250 CSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred HHHHHHHccCChhhCCCHHHHhcC
Confidence 789999999999999999999865
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-31 Score=275.38 Aligned_cols=247 Identities=21% Similarity=0.225 Sum_probs=181.1
Q ss_pred hhhhhcCCCCCccEEEEcC-CCcEEEEEEeeccch---hHHHHHHHHHHHhcc---CCCCceeEEEEEEcCCc-----ee
Q 005177 450 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT---RIKIVSEFITRIGTV---RHKNLIRLLGFCYNRHQ-----AY 517 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l---~H~niv~l~g~~~~~~~-----~~ 517 (710)
..+.+|+|++|.||+|+.. +|..||+|+++.... ....+.+|++++.++ +||||+++++++...+. .+
T Consensus 3 ~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~ 82 (287)
T cd07838 3 ELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLT 82 (287)
T ss_pred EEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeE
Confidence 5678999999999999974 589999999975321 133455677666544 69999999999988776 99
Q ss_pred EEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccc
Q 005177 518 LLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~ 593 (710)
++|||++ ++|.+++.. .+++..+..++.|+++||+|||+. +++|+||||+||+++.++.+||+|||+++...
T Consensus 83 l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~ 158 (287)
T cd07838 83 LVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLARIYS 158 (287)
T ss_pred EEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence 9999997 589888754 368999999999999999999998 99999999999999999999999999987654
Q ss_pred ccCCCC-cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc---------------ccccccc-c
Q 005177 594 LADGSF-PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPIDGLL-G 656 (710)
Q Consensus 594 ~~~~~~-~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~---------------~~~~~~~-~ 656 (710)
...... ......+.+||......++.++|||||||++|||+||+.|+........ |+..... .
T Consensus 159 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07838 159 FEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPR 238 (287)
T ss_pred CCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccch
Confidence 321111 1123346678887777889999999999999999999877764321100 0000000 0
Q ss_pred cccccccc-CCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 657 EMYNENEV-GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 657 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
........ .......+....+.+++.+||+.||++||++.|++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 239 SSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred hhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 00000000 001111233456778999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-31 Score=277.05 Aligned_cols=248 Identities=19% Similarity=0.256 Sum_probs=181.1
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.||+|++|.||+|.. .+|+.||+|.+.... ...+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 6 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~- 84 (294)
T PLN00009 6 KVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLD- 84 (294)
T ss_pred EEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEeccc-
Confidence 667899999999999986 578999999986532 224567889999999999999999999999999999999996
Q ss_pred CChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC-CCceEEcccCccccccccCCCC-
Q 005177 526 GNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-NMEPHLAEFGFKYLTQLADGSF- 599 (710)
Q Consensus 526 gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~-~~~~kl~DfGla~~~~~~~~~~- 599 (710)
+++.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++.........
T Consensus 85 ~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~ 161 (294)
T PLN00009 85 LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFT 161 (294)
T ss_pred ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCCCccccc
Confidence 588887754 235667778999999999999998 9999999999999985 5679999999987543221111
Q ss_pred -cccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccc---------cccc------cccccccc
Q 005177 600 -PAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP---------IDGL------LGEMYNEN 662 (710)
Q Consensus 600 -~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~---------~~~~------~~~~~~~~ 662 (710)
..+...+.+||+... ..++.++||||+||++|||+||+.|+.......... .... ........
T Consensus 162 ~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (294)
T PLN00009 162 HEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAF 241 (294)
T ss_pred cCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhc
Confidence 112344677887654 357889999999999999999998886432110000 0000 00000000
Q ss_pred ccCCCcc----hHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 663 EVGSSSS----LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 663 ~~~~~~~----~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
....... .+.....+.+++.+|++.+|++||++.+++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 242 PKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred ccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000000 01123457789999999999999999999863
|
|
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.8e-32 Score=287.52 Aligned_cols=256 Identities=20% Similarity=0.252 Sum_probs=187.2
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcC-----Cc
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR-----HQ 515 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-----~~ 515 (710)
.|. ..+.+|+|+||.||+|.. .+|..||||.+... ....+.+.+|+.++++++||||+++++++... ..
T Consensus 6 ~y~--~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 6 KYV--PIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred cee--EEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 455 677899999999999985 67999999998753 22345667899999999999999999988654 34
Q ss_pred eeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccc
Q 005177 516 AYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~ 593 (710)
.++||||+. ++|.+++.. .+++.....++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 159 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLARTTS 159 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccccccC
Confidence 799999996 689888865 467888899999999999999998 99999999999999999999999999987654
Q ss_pred ccCCC--CcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCC---------------cc--cccc
Q 005177 594 LADGS--FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NK--PIDG 653 (710)
Q Consensus 594 ~~~~~--~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~---------------~~--~~~~ 653 (710)
..... ...+..++.+||.... ..++.++|||||||++|||++|+.|+....... .+ ....
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd07858 160 EKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNE 239 (337)
T ss_pred CCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCch
Confidence 32111 1112334667776543 458889999999999999999999886432100 00 0000
Q ss_pred cccccccccccCCCc----chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH--HhccC
Q 005177 654 LLGEMYNENEVGSSS----SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL--LSGLK 706 (710)
Q Consensus 654 ~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~--L~~~~ 706 (710)
............... ...+....+.+++.+|++.+|++|||++|+++. ++.++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~ 298 (337)
T cd07858 240 KARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH 298 (337)
T ss_pred hhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence 000000000000000 011234567899999999999999999999876 55443
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-33 Score=314.68 Aligned_cols=241 Identities=20% Similarity=0.224 Sum_probs=188.8
Q ss_pred hhhhhcCCCCCccEEEE-cCCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~-~~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
....||.|.||.||-|+ ..+|...|||-++.. ....+...+|+.++..++|||+|+++|+-.+++..+|.||||++
T Consensus 1239 rg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~ 1318 (1509)
T KOG4645|consen 1239 RGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEG 1318 (1509)
T ss_pred cccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhcc
Confidence 66789999999999998 578999999988753 22356688999999999999999999999999999999999999
Q ss_pred CChhhhhhcC--CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC----
Q 005177 526 GNLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---- 599 (710)
Q Consensus 526 gsL~~~l~~~--~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~---- 599 (710)
|+|.+.+... .+......+..|++.|++|||++ +||||||||+||+||.+|..|.+|||.|..........
T Consensus 1319 GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el 1395 (1509)
T KOG4645|consen 1319 GSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGEL 1395 (1509)
T ss_pred CcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHH
Confidence 9999999764 34444456788999999999999 99999999999999999999999999987654332111
Q ss_pred --cccccccCchhhhhcc---CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 600 --PAKIAWTESGEFYNAM---KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 600 --~~~~~~~~~~e~~~~~---~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
..+++.|++||++.+. ...-+.||||+|||++||+||++|+..-.+ +|.+.-.+...-. +..+....
T Consensus 1396 ~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn--e~aIMy~V~~gh~------Pq~P~~ls 1467 (1509)
T KOG4645|consen 1396 QSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN--EWAIMYHVAAGHK------PQIPERLS 1467 (1509)
T ss_pred HhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc--hhHHHhHHhccCC------CCCchhhh
Confidence 1245556677766432 345568999999999999999999974332 3443321111111 12223356
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+..+++.+|++.||++|-++.|+++.
T Consensus 1468 ~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1468 SEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred HhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 678899999999999999888887664
|
|
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.8e-32 Score=283.62 Aligned_cols=252 Identities=20% Similarity=0.271 Sum_probs=184.8
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchh---HHHHHHHHHHHhccCCCCceeEEEEEEcC--Ccee
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATR---IKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAY 517 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~ 517 (710)
++|. ..+.||+|+||.||+|.. .+|+.||+|.++..... ...+.+|++++++++|+||+++++++.+. +..+
T Consensus 7 ~~y~--~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 7 TEFE--KLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred ccee--EeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 3455 778899999999999986 57999999999753221 23456799999999999999999998765 4689
Q ss_pred EEEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccc
Q 005177 518 LLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 594 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~ 594 (710)
+||||+. ++|.+++.. .+++.+...++.|+++|++|||+. +++||||||+||+++.++.+||+|||+++....
T Consensus 85 lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 85 LVMEYCE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTYGL 160 (309)
T ss_pred EEEecCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence 9999997 478887754 468999999999999999999998 999999999999999999999999999876543
Q ss_pred cCCCCc--ccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc---------ccccccccc--
Q 005177 595 ADGSFP--AKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI---------DGLLGEMYN-- 660 (710)
Q Consensus 595 ~~~~~~--~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~---------~~~~~~~~~-- 660 (710)
...... .....|.+||...+ ..++.++||||+||++|||++|+.|+........... ........+
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
T cd07845 161 PAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLP 240 (309)
T ss_pred ccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhccc
Confidence 211111 12344677787654 4578899999999999999999988864322110000 000000000
Q ss_pred ---cccc--CCCcch----HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 661 ---ENEV--GSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 661 ---~~~~--~~~~~~----~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.... ...... ......+.+++.+|++.||++|||++|++.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 241 LVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred ccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0000 000000 1123556789999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-31 Score=286.41 Aligned_cols=254 Identities=22% Similarity=0.280 Sum_probs=185.9
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhcc-CCCCceeEEEEEEcC--C
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNR--H 514 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~--~ 514 (710)
+.+.|. ..+.+|+|+||.||+|.. .+|..||||++... ......+.+|++++.++ +||||++++++|... .
T Consensus 5 ~~~~y~--~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~ 82 (337)
T cd07852 5 ILRKYE--ILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDK 82 (337)
T ss_pred hhhHHH--HhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCc
Confidence 344566 778999999999999986 46889999998642 22345577899999999 999999999998754 3
Q ss_pred ceeEEEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccc
Q 005177 515 QAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 515 ~~~lv~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~ 593 (710)
..++||||++ ++|.+++.. ..+|..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~ 158 (337)
T cd07852 83 DIYLVFEYME-TDLHAVIRANILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARSLS 158 (337)
T ss_pred eEEEEecccc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchhccc
Confidence 6899999997 599998876 568889999999999999999998 99999999999999999999999999987653
Q ss_pred ccCCC----C---cccccccCchhhhh-ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc---------c----
Q 005177 594 LADGS----F---PAKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI---------D---- 652 (710)
Q Consensus 594 ~~~~~----~---~~~~~~~~~~e~~~-~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~---------~---- 652 (710)
..... . ..+..++.+||... ....+.++|||||||++|||+||+.|+........... .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (337)
T cd07852 159 ELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIE 238 (337)
T ss_pred cccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence 22111 0 11233466777553 34577889999999999999999998864321110000 0
Q ss_pred ----cccccccc----ccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 653 ----GLLGEMYN----ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 653 ----~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
....++.+ ...........+....+.+++.+|++.+|++|||+.++++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 239 SIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 00000000 00000000011123567889999999999999999999875
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-31 Score=276.19 Aligned_cols=247 Identities=21% Similarity=0.250 Sum_probs=184.8
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcC--CceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~Ey~ 523 (710)
..+.+|+|++|.||+|.. .+|+.+|+|++.... ...+.+.+|++++++++|||++++++++... +..++||||+
T Consensus 3 ~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 82 (287)
T cd07840 3 KIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYM 82 (287)
T ss_pred eeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEeccc
Confidence 557899999999999986 468999999998652 2345678899999999999999999999987 7899999999
Q ss_pred CCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC---
Q 005177 524 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--- 597 (710)
Q Consensus 524 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--- 597 (710)
++ +|.+++.. ..++.....++.|+++||+|||+. +++|+||||+||++++++.+|++|||++........
T Consensus 83 ~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~ 158 (287)
T cd07840 83 DH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADY 158 (287)
T ss_pred cc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccc
Confidence 84 89888865 468889999999999999999998 999999999999999999999999999876543221
Q ss_pred CCcccccccCchhhhh-ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCC---------------cccccccc--cccc
Q 005177 598 SFPAKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKPIDGLL--GEMY 659 (710)
Q Consensus 598 ~~~~~~~~~~~~e~~~-~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~---------------~~~~~~~~--~~~~ 659 (710)
.......++.+||... ...++.++|||||||++|||+||+.|+....... .|...... .+..
T Consensus 159 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07840 159 TNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENL 238 (287)
T ss_pred cccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhc
Confidence 1111233466777544 3457889999999999999999998886432110 00000000 0000
Q ss_pred cccccCCCcc----hHH-HHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 660 NENEVGSSSS----LQD-EIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 660 ~~~~~~~~~~----~~~-~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+. ...... ..+ ....+.+++.+|+..+|++||+++++++.
T Consensus 239 ~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 239 KPK-KPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred ccc-ccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 000 000000 011 14567899999999999999999999763
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-31 Score=271.56 Aligned_cols=239 Identities=20% Similarity=0.277 Sum_probs=189.3
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.+|+|++|.+|++.. .++..||+|.+.... ...+.+.+|++++.+++|||++++++++.+++..++||||+++
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (254)
T cd06627 4 LGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAEN 83 (254)
T ss_pred eeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCC
Confidence 567899999999999985 578899999998754 2456789999999999999999999999999999999999999
Q ss_pred CChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Ccc
Q 005177 526 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPA 601 (710)
Q Consensus 526 gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~ 601 (710)
++|.+++.. .+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.++|+|||++......... ...
T Consensus 84 ~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 160 (254)
T cd06627 84 GSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVV 160 (254)
T ss_pred CcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCcccccccc
Confidence 999999865 578999999999999999999998 9999999999999999999999999998765432221 111
Q ss_pred cccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHH
Q 005177 602 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 681 (710)
Q Consensus 602 ~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 681 (710)
+...+.+||......++.++||||+|++++||++|+.|+........ ..+.........+. .....+.+++
T Consensus 161 ~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~------~~~~~~~~~~~~~~---~~~~~~~~~i 231 (254)
T cd06627 161 GTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAA------LFRIVQDDHPPLPE---GISPELKDFL 231 (254)
T ss_pred cchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHH------HHHHhccCCCCCCC---CCCHHHHHHH
Confidence 33346677877766788899999999999999999998864322110 00000000000011 1234567888
Q ss_pred hhcCCCCCCCCCCHHHHHH
Q 005177 682 LLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 682 ~~Cl~~~p~~RPs~~evl~ 700 (710)
.+|+..+|++||++.|++.
T Consensus 232 ~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 232 MQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred HHHHhCChhhCcCHHHHhc
Confidence 9999999999999999875
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.7e-32 Score=287.64 Aligned_cols=252 Identities=19% Similarity=0.255 Sum_probs=186.2
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEc----CCc
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYN----RHQ 515 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~ 515 (710)
..|. ..+.||+|++|.||+|.. .+|..||+|++.... ...+.+.+|+.++++++||||+++++++.. ...
T Consensus 5 ~~y~--~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (334)
T cd07855 5 SRYK--PIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKD 82 (334)
T ss_pred hcee--eeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCce
Confidence 3455 667899999999999985 679999999987532 234567789999999999999999998764 346
Q ss_pred eeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccc
Q 005177 516 AYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~ 593 (710)
.++||||+. |+|.+++.. .+++.....++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 158 (334)
T cd07855 83 VYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMARGLS 158 (334)
T ss_pred EEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccceeec
Confidence 899999996 689998864 468889999999999999999998 99999999999999999999999999987543
Q ss_pred ccCCC------CcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc---------c-------
Q 005177 594 LADGS------FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK---------P------- 650 (710)
Q Consensus 594 ~~~~~------~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~---------~------- 650 (710)
..... ...+..++.+||.... ..++.++|||||||++|||++|+.||.+....... +
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~ 238 (334)
T cd07855 159 SSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNR 238 (334)
T ss_pred ccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhh
Confidence 21111 1113344667786544 45788999999999999999999998643221000 0
Q ss_pred -ccccccccccccccCCCcch----HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 651 -IDGLLGEMYNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 651 -~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
......+..+.........+ ......+.+++.+|++.+|++||++.|++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 239 IGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 00000000000000001111 1234567899999999999999999998874
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.9e-32 Score=301.26 Aligned_cols=254 Identities=15% Similarity=0.154 Sum_probs=176.2
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEcC--CCcEEEEE------------------EeeccchhHHHHHHHHHHHhccCCC
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVLP--TGITVSVK------------------KIEWGATRIKIVSEFITRIGTVRHK 501 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~~--~g~~vAvK------------------~l~~~~~~~~~~~~e~~~l~~l~H~ 501 (710)
..+.|. ..+.||+|+||.||++... ++..+++| +++........+.+|++++++++||
T Consensus 146 ~~~~Y~--ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hp 223 (501)
T PHA03210 146 FLAHFR--VIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHE 223 (501)
T ss_pred hhhccE--EEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCC
Confidence 445566 7889999999999998642 22222222 2222222345678999999999999
Q ss_pred CceeEEEEEEcCCceeEEEeecCCCChhhhhhc-CC------CHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeE
Q 005177 502 NLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRT-KR------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIV 574 (710)
Q Consensus 502 niv~l~g~~~~~~~~~lv~Ey~~~gsL~~~l~~-~~------~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiL 574 (710)
|||++++++.+++..|+|+||+. +++.+++.. .. ...+...|+.|++.||+|||+. +|+||||||+|||
T Consensus 224 nIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NIL 299 (501)
T PHA03210 224 NILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIF 299 (501)
T ss_pred CcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEE
Confidence 99999999999999999999996 577777643 12 2345568999999999999998 9999999999999
Q ss_pred ecCCCceEEcccCccccccccCCCC---cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCC-CCccc
Q 005177 575 FDENMEPHLAEFGFKYLTQLADGSF---PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSS-LQNKP 650 (710)
Q Consensus 575 l~~~~~~kl~DfGla~~~~~~~~~~---~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~-~~~~~ 650 (710)
++.++.+||+|||+++......... ..+...|.+||+.....++.++|||||||++|||++|+.++..... .....
T Consensus 300 l~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~ 379 (501)
T PHA03210 300 LNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQ 379 (501)
T ss_pred ECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHH
Confidence 9999999999999997654321111 1234446788988888899999999999999999999865442211 10000
Q ss_pred ccccc-------ccc----------ccccccC-CCcchHHH------HHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 651 IDGLL-------GEM----------YNENEVG-SSSSLQDE------IKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 651 ~~~~~-------~~~----------~~~~~~~-~~~~~~~~------~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..... .+. ++..... ........ ...+.+++.+|++.||++|||+.|++++
T Consensus 380 ~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 380 LLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 00000 000 0000000 00001111 1245567889999999999999999864
|
|
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=279.11 Aligned_cols=248 Identities=20% Similarity=0.247 Sum_probs=187.7
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.||+|++|.||+|.. .+|+.+|+|.+..... ....+.+|++.+++++||||+++++++.+++..++||||+++
T Consensus 3 ~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 82 (283)
T cd05118 3 KLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT 82 (283)
T ss_pred cceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC
Confidence 456799999999999986 5789999999875432 356778899999999999999999999999999999999985
Q ss_pred CChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Cc
Q 005177 526 GNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FP 600 (710)
Q Consensus 526 gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~ 600 (710)
++.+++.. ..++.++..++.|+++||+|||+. +|+|+||||+||+++.++.+||+|||.+......... ..
T Consensus 83 -~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~ 158 (283)
T cd05118 83 -DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHY 158 (283)
T ss_pred -CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCc
Confidence 88888765 568899999999999999999998 9999999999999999999999999998765432211 11
Q ss_pred ccccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc---------ccccccccccc----------
Q 005177 601 AKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK---------PIDGLLGEMYN---------- 660 (710)
Q Consensus 601 ~~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~---------~~~~~~~~~~~---------- 660 (710)
....++.+||..... .++.++||||+||++|||+||+.|+......... ..........+
T Consensus 159 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd05118 159 VVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFP 238 (283)
T ss_pred cCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhc
Confidence 233446777876655 6888999999999999999999888643321100 00000000000
Q ss_pred -ccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 661 -ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 661 -~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
...........+....+.+++.+|++.||.+||++.|++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 239 KKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred cccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 00000001112234578899999999999999999999763
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-31 Score=276.29 Aligned_cols=248 Identities=19% Similarity=0.242 Sum_probs=183.1
Q ss_pred hhhhhcCCCCCccEEEEcC-CCcEEEEEEeeccch--hHHHHHHHHHHHhccC-CCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT--RIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.||+|++|.||+|... +++.||||++..... ......+|+..+.+++ ||||+++++++.+++..++||||+ +
T Consensus 3 ~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~ 81 (283)
T cd07830 3 VIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-E 81 (283)
T ss_pred eheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-C
Confidence 5578999999999999974 588999999875422 2334456889999999 999999999999999999999999 7
Q ss_pred CChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC-c
Q 005177 526 GNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF-P 600 (710)
Q Consensus 526 gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~-~ 600 (710)
|+|.+++.. ..+|.....++.|+++||.|||+. +++|+||||+||++++++.++|+|||+++......... .
T Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 158 (283)
T cd07830 82 GNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDY 158 (283)
T ss_pred CCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCC
Confidence 899998865 458999999999999999999998 99999999999999999999999999987654321111 1
Q ss_pred ccccccCchhhh-hccCCccccceeeHHHHHHHHHhCCCCCCCCCCCC---------------ccccccccccccccccc
Q 005177 601 AKIAWTESGEFY-NAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKPIDGLLGEMYNENEV 664 (710)
Q Consensus 601 ~~~~~~~~~e~~-~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~---------------~~~~~~~~~~~~~~~~~ 664 (710)
.+..++.+||.. ....++.++||||||++++||+||+.|+....... .|..........+....
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd07830 159 VSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFP 238 (283)
T ss_pred CCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccccc
Confidence 123345667755 34457889999999999999999998875332110 00000000000000000
Q ss_pred -CCCcch----HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 665 -GSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 665 -~~~~~~----~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
...... ......+.+++.+|++.+|++|||++|++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 239 QFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred ccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 000000 1113568899999999999999999999763
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-31 Score=283.43 Aligned_cols=246 Identities=20% Similarity=0.211 Sum_probs=182.1
Q ss_pred hhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchh---------------HHHHHHHHHHHhccCCCCceeEEEEEEcCC
Q 005177 451 CEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATR---------------IKIVSEFITRIGTVRHKNLIRLLGFCYNRH 514 (710)
Q Consensus 451 ~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~---------------~~~~~~e~~~l~~l~H~niv~l~g~~~~~~ 514 (710)
.+.||+|+||.||+|.. .+|+.||||.++..... ...+.+|++++++++||||+++++++..++
T Consensus 14 ~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 93 (335)
T PTZ00024 14 GAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGD 93 (335)
T ss_pred hhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCC
Confidence 46799999999999985 57999999998753221 124678999999999999999999999999
Q ss_pred ceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccc
Q 005177 515 QAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 592 (710)
Q Consensus 515 ~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~ 592 (710)
..++||||++ |+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+|++|||+++..
T Consensus 94 ~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl~dfg~~~~~ 169 (335)
T PTZ00024 94 FINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKIADFGLARRY 169 (335)
T ss_pred cEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEECCccceeec
Confidence 9999999997 699998865 457888899999999999999998 9999999999999999999999999998754
Q ss_pred ccc--------------CCC--CcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc-------
Q 005177 593 QLA--------------DGS--FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN------- 648 (710)
Q Consensus 593 ~~~--------------~~~--~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~------- 648 (710)
... ... ......++.+||...+ ..++.++||||+||++|||+||+.|+........
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~ 249 (335)
T PTZ00024 170 GYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFEL 249 (335)
T ss_pred ccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 310 000 0112334667776654 3468899999999999999999988864332110
Q ss_pred --------ccccccccccccccccCCCcch----HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 649 --------KPIDGLLGEMYNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 649 --------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
|......... .+.....+... ......+.+++.+|++.+|++||+++|++.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 250 LGTPNEDNWPQAKKLPLY-TEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred hCCCchhhCcchhhcccc-cccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 0000000000 00000000101 1123467799999999999999999999864
|
|
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-31 Score=286.35 Aligned_cols=256 Identities=19% Similarity=0.236 Sum_probs=187.8
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCC-----
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----- 514 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----- 514 (710)
..|. ..+.||+|++|.||+|+. .+|..||||++.... .....+.+|++++++++||||+++++++....
T Consensus 15 ~~y~--~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 92 (342)
T cd07879 15 ERYT--SLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEF 92 (342)
T ss_pred cceE--EEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCC
Confidence 3455 678999999999999985 579999999987531 22455788999999999999999999987542
Q ss_pred -ceeEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccc
Q 005177 515 -QAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 515 -~~~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~ 593 (710)
..++|+||+.. ++.++.....++.....++.|+++||+|||+. +|+||||||+||+++.++.+|++|||+++...
T Consensus 93 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~ 168 (342)
T cd07879 93 QDFYLVMPYMQT-DLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGLARHAD 168 (342)
T ss_pred ceEEEEeccccc-CHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCCCcCCC
Confidence 46999999974 88877766788999999999999999999998 99999999999999999999999999987643
Q ss_pred ccCCCCcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc-c-----------cc-----
Q 005177 594 LADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-G-----------LL----- 655 (710)
Q Consensus 594 ~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~-~-----------~~----- 655 (710)
.... ......++.+||.... ..++.++|||||||++|||++|+.||.+.......... . ..
T Consensus 169 ~~~~-~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (342)
T cd07879 169 AEMT-GYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAA 247 (342)
T ss_pred CCCC-CceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccch
Confidence 2211 1122344667787654 46788999999999999999999998743211100000 0 00
Q ss_pred cccccccccCCCcc----hHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH--HhccC
Q 005177 656 GEMYNENEVGSSSS----LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL--LSGLK 706 (710)
Q Consensus 656 ~~~~~~~~~~~~~~----~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~--L~~~~ 706 (710)
.......+...... .+.....+.+++.+|++.||++||++.|++.+ ++..+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 248 KSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred HHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence 00000000000000 01122457799999999999999999999865 55554
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.7e-31 Score=276.24 Aligned_cols=240 Identities=20% Similarity=0.241 Sum_probs=183.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc----chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~----~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.+|+|++|.||+|.. .++..||+|.+... ....+.+.+|++++++++|||++++++++..++..++||||+.
T Consensus 19 ~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 98 (308)
T cd06634 19 DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL 98 (308)
T ss_pred HHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccC
Confidence 678899999999999985 56889999998742 1234567789999999999999999999999999999999997
Q ss_pred CCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCcc
Q 005177 525 NGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPA 601 (710)
Q Consensus 525 ~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~ 601 (710)
|++.+.+.. .+++.++..++.|++.|+.|||+. +++||||||+||+++.++.+|++|||++....... .. .
T Consensus 99 -~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~-~~-~ 172 (308)
T cd06634 99 -GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN-XF-V 172 (308)
T ss_pred -CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecCcc-cc-c
Confidence 688877643 467888899999999999999998 99999999999999999999999999987654221 11 1
Q ss_pred cccccCchhhhh---ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHH
Q 005177 602 KIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 678 (710)
Q Consensus 602 ~~~~~~~~e~~~---~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (710)
+...+.+||... ....+.++|||||||++|||++|+.|+........ . ....... .. ..........+.
T Consensus 173 ~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~-----~~~~~~~-~~-~~~~~~~~~~~~ 244 (308)
T cd06634 173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-L-----YHIAQNE-SP-ALQSGHWSEYFR 244 (308)
T ss_pred CCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHH-H-----HHHhhcC-CC-CcCcccccHHHH
Confidence 223466777753 34578899999999999999999998764321100 0 0000000 00 000112234567
Q ss_pred HHHhhcCCCCCCCCCCHHHHHHHHh
Q 005177 679 DVALLCTRSTPSDRPSMEEALKLLS 703 (710)
Q Consensus 679 ~l~~~Cl~~~p~~RPs~~evl~~L~ 703 (710)
+++.+||+.+|++||++.++++.-.
T Consensus 245 ~li~~cl~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 245 NFVDSCLQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred HHHHHHhhCCcccCCCHHHHhhCcc
Confidence 8899999999999999999987643
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.7e-31 Score=277.11 Aligned_cols=246 Identities=19% Similarity=0.242 Sum_probs=180.8
Q ss_pred hhhhhcCCCCCccEEEEcC---CCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcC--CceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVLP---TGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~---~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ 520 (710)
..+.||+|++|.||+|... +|..||+|.+.... ...+.+.+|++++++++||||+++++++.+. +..++||
T Consensus 4 ~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 83 (316)
T cd07842 4 IEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLF 83 (316)
T ss_pred EEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEE
Confidence 5577999999999999863 58999999998632 2245677899999999999999999999988 7899999
Q ss_pred eecCCCChhhhhhc-------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC----CCceEEcccCcc
Q 005177 521 DYLPNGNLSEKIRT-------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE----NMEPHLAEFGFK 589 (710)
Q Consensus 521 Ey~~~gsL~~~l~~-------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~----~~~~kl~DfGla 589 (710)
||+++ ++.+.+.. .++......++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||++
T Consensus 84 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 84 DYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred eCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 99975 77776642 346677889999999999999998 9999999999999999 899999999998
Q ss_pred ccccccCCC-----CcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc--cccc-----ccc-
Q 005177 590 YLTQLADGS-----FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN--KPID-----GLL- 655 (710)
Q Consensus 590 ~~~~~~~~~-----~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~--~~~~-----~~~- 655 (710)
+........ ......++.+||...+ ..++.++|||||||+++||++|+.|+........ .+.. ...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (316)
T cd07842 160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFE 239 (316)
T ss_pred cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHH
Confidence 765322110 1112334677786654 4578899999999999999999998874322110 0000 000
Q ss_pred -------------------cc---cccccccCCCcchH-------HHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 656 -------------------GE---MYNENEVGSSSSLQ-------DEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 656 -------------------~~---~~~~~~~~~~~~~~-------~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
.. ..... ........ .....+.+++.+|++.||++|||+.|+++
T Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 240 VLGTPTEKDWPDIKKMPEYDTLMKDFKTK-TYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HhCCCchhHHHHHhhcccchhhhhhccCC-CCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00 00000 00001111 12346789999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-31 Score=278.92 Aligned_cols=252 Identities=20% Similarity=0.270 Sum_probs=183.7
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCC----
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRH---- 514 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~---- 514 (710)
.++|+ ..+.+|+|++|.||+|.. .+|+.||||+++.... ....+.+|++++++++||||+++++++.+.+
T Consensus 6 ~~~~~--~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 6 VDKFD--IIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhh--eeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 34566 678899999999999996 5689999999975422 2356678999999999999999999987654
Q ss_pred ------ceeEEEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcc
Q 005177 515 ------QAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 585 (710)
Q Consensus 515 ------~~~lv~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~D 585 (710)
..++||||+++ ++.+.+.. ..++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~kl~d 159 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKLAD 159 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEEeCc
Confidence 78999999986 77777754 468999999999999999999998 999999999999999999999999
Q ss_pred cCccccccccCCC-C--cccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc---------ccc
Q 005177 586 FGFKYLTQLADGS-F--PAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK---------PID 652 (710)
Q Consensus 586 fGla~~~~~~~~~-~--~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~---------~~~ 652 (710)
||+++........ . ......+.+||.... ...+.++|||||||+++||++|+.|+......... +..
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (302)
T cd07864 160 FGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCP 239 (302)
T ss_pred ccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence 9998765322211 1 112233566776543 35678899999999999999999888643211000 000
Q ss_pred cccccc--------ccccccC---CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 653 GLLGEM--------YNENEVG---SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 653 ~~~~~~--------~~~~~~~---~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
.....+ .+..... ...........+.+++.+|++.+|++||++.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 240 AVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred hhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000000 0000000 00000112346789999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-31 Score=276.98 Aligned_cols=246 Identities=13% Similarity=0.077 Sum_probs=184.8
Q ss_pred hhhhhcCCCCCccEEEEc----CCCcEEEEEEeeccc-----hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEE
Q 005177 450 ECEEAARPQSAAGCKAVL----PTGITVSVKKIEWGA-----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~----~~g~~vAvK~l~~~~-----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv 519 (710)
..+.||+|++|.||++.. .+++.||||.++... ...+.+.+|++++.++ +||||+++++.+..++..++|
T Consensus 4 ~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 83 (288)
T cd05583 4 LLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLI 83 (288)
T ss_pred EEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEE
Confidence 567899999999999874 467899999997532 1245678899999999 599999999999999999999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
|||+++|+|.+++.. ..++.....++.|+++||+|||+. +++||||||+||+++.++.++++|||+++.......
T Consensus 84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 160 (288)
T cd05583 84 LDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEE 160 (288)
T ss_pred EecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECccccccccccc
Confidence 999999999999864 457888889999999999999988 999999999999999999999999999875432211
Q ss_pred CC---cccccccCchhhhhccC--CccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHH
Q 005177 598 SF---PAKIAWTESGEFYNAMK--EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 672 (710)
Q Consensus 598 ~~---~~~~~~~~~~e~~~~~~--~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (710)
.. ..+...+.+||...+.. .+.++||||||+++|||+||+.|+......... ......+.... ...+. .
T Consensus 161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~--~~~~~~~~~~~-~~~~~---~ 234 (288)
T cd05583 161 ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQ--SEISRRILKSK-PPFPK---T 234 (288)
T ss_pred cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchH--HHHHHHHHccC-CCCCc---c
Confidence 11 11223355677765544 678899999999999999999998633211100 00011111111 11111 1
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhc
Q 005177 673 EIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 704 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~ 704 (710)
....+.+++.+|++.+|++|||+.+|.+.|+.
T Consensus 235 ~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 235 MSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred cCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 22456688899999999999999888776643
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-31 Score=282.46 Aligned_cols=239 Identities=18% Similarity=0.196 Sum_probs=187.6
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchh---HHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATR---IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
....||+|.|+.|..|.. .+|..||||.++++... .+.+.+|+++|..++|||||+++.+...+..+|+||||+.+
T Consensus 60 i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~ 139 (596)
T KOG0586|consen 60 IIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASG 139 (596)
T ss_pred eeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccC
Confidence 677899999999999985 67999999999876432 34488999999999999999999999999999999999999
Q ss_pred CChhhhhhcC--CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC-CCCccc
Q 005177 526 GNLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD-GSFPAK 602 (710)
Q Consensus 526 gsL~~~l~~~--~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~-~~~~~~ 602 (710)
|.+++++... ........+..|+.+|++|||++ .|+|||||++|||||.++.+||+|||++..+.... .....+
T Consensus 140 ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lqt~cg 216 (596)
T KOG0586|consen 140 GELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQTFCG 216 (596)
T ss_pred chhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeecccccccccCC
Confidence 9999999763 34456678889999999999999 99999999999999999999999999988765321 112234
Q ss_pred ccccCchhhhhccCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHH
Q 005177 603 IAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 681 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~-~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 681 (710)
.+-|++||++++.++ ++.+|+||+||++|-|+.|..||++..-.. .........+.-+ ... ..++-+++
T Consensus 217 sppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~-Lr~rvl~gk~rIp------~~m---s~dce~lL 286 (596)
T KOG0586|consen 217 SPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKE-LRPRVLRGKYRIP------FYM---SCDCEDLL 286 (596)
T ss_pred CCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccc-ccchheeeeeccc------cee---echhHHHH
Confidence 455888998887654 778999999999999999999998543211 1111111111111 111 12344666
Q ss_pred hhcCCCCCCCCCCHHHHHHH
Q 005177 682 LLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 682 ~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+.+..+|.+|++++++.+.
T Consensus 287 rk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 287 RKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred HHhhccCccccCCHHHhhhh
Confidence 77888999999999998764
|
|
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-32 Score=283.91 Aligned_cols=241 Identities=19% Similarity=0.206 Sum_probs=185.9
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
+...+|.|+||.||||+- .++-..|.|.|.... .....+.-||++|....||+||+|++.|+.++.++|..|||.||-
T Consensus 36 IiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGA 115 (1187)
T KOG0579|consen 36 IIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGA 115 (1187)
T ss_pred HHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCch
Confidence 667889999999999986 445567888887533 346678889999999999999999999999999999999999999
Q ss_pred hhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccc---ccCCCCcc
Q 005177 528 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ---LADGSFPA 601 (710)
Q Consensus 528 L~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~---~~~~~~~~ 601 (710)
++.++-. .+...+...++++++.||.|||+. .|||||||+.|||+.-+|.++++|||++-... ....++.
T Consensus 116 VDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFI- 191 (1187)
T KOG0579|consen 116 VDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFI- 191 (1187)
T ss_pred HhHHHHHhccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchhHHhhhcccc-
Confidence 9887743 678889999999999999999999 99999999999999999999999999863321 1122333
Q ss_pred cccccCchhhh-----hccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHH
Q 005177 602 KIAWTESGEFY-----NAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 676 (710)
Q Consensus 602 ~~~~~~~~e~~-----~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (710)
+++|+++||+. ...+|+.++||||||+.|.||.-+.+|..+-..+ ..+-.+....+.. .-.+......
T Consensus 192 GTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpM------RVllKiaKSePPT-LlqPS~Ws~~ 264 (1187)
T KOG0579|consen 192 GTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPM------RVLLKIAKSEPPT-LLQPSHWSRS 264 (1187)
T ss_pred CCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchH------HHHHHHhhcCCCc-ccCcchhhhH
Confidence 44555566544 3567999999999999999999998876532211 1112222111111 1112234556
Q ss_pred HHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 677 VLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 677 ~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+.++..+|+..+|..||++.+++++
T Consensus 265 F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 265 FSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred HHHHHHHHHhcCCccCCCHHHHhhC
Confidence 7788899999999999999998864
|
|
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-31 Score=275.98 Aligned_cols=242 Identities=14% Similarity=0.094 Sum_probs=181.0
Q ss_pred hhhhhcCCCCCccEEEEc----CCCcEEEEEEeeccc-----hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEE
Q 005177 450 ECEEAARPQSAAGCKAVL----PTGITVSVKKIEWGA-----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~----~~g~~vAvK~l~~~~-----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv 519 (710)
..+.+|+|+||.||++.. .+|..||+|.+.... ...+.+.+|++++.++ +|+||+++++++..++..++|
T Consensus 4 ~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (290)
T cd05613 4 LLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLI 83 (290)
T ss_pred eeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEE
Confidence 567899999999999975 478999999997532 1245678899999999 589999999999999999999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
|||+++|+|.+++.. .+.+.....++.|+++||+|||+. +++||||||+||+++.++.+||+|||+++.......
T Consensus 84 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (290)
T cd05613 84 LDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV 160 (290)
T ss_pred EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccceecccccc
Confidence 999999999999865 456777888899999999999998 999999999999999999999999999876532211
Q ss_pred C---CcccccccCchhhhhc--cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHH
Q 005177 598 S---FPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 672 (710)
Q Consensus 598 ~---~~~~~~~~~~~e~~~~--~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (710)
. ...+...+.+||.... ...+.++|||||||++|||+||+.|+........ .......+.... ...+ ..
T Consensus 161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~--~~~~~~~~~~~~-~~~~---~~ 234 (290)
T cd05613 161 ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNS--QAEISRRILKSE-PPYP---QE 234 (290)
T ss_pred cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcccc--HHHHHHHhhccC-CCCC---cc
Confidence 1 1112333566776543 2467789999999999999999999863221100 001111111111 1101 11
Q ss_pred HHHHHHHHHhhcCCCCCCCCC-----CHHHHHH
Q 005177 673 EIKLVLDVALLCTRSTPSDRP-----SMEEALK 700 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RP-----s~~evl~ 700 (710)
....+.+++.+|++.+|++|| ++++++.
T Consensus 235 ~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 235 MSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 234567888999999999997 6677655
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.2e-31 Score=270.50 Aligned_cols=233 Identities=18% Similarity=0.173 Sum_probs=174.8
Q ss_pred hcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChhhhh
Q 005177 454 AARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKI 532 (710)
Q Consensus 454 ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~~~l 532 (710)
+|+|+||.||++.. .+|..+|+|.+........ ..++..+. .+||||+++++++..++..++||||+++|+|.+++
T Consensus 24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--e~~~~~~~-~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l 100 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI--EPMVHQLM-KDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLL 100 (267)
T ss_pred ecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh--hHHHHHHh-hcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHH
Confidence 59999999999985 6788999999875322211 11111111 26999999999999999999999999999999999
Q ss_pred hc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC-ceEEcccCccccccccCCCCcccccccCch
Q 005177 533 RT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM-EPHLAEFGFKYLTQLADGSFPAKIAWTESG 609 (710)
Q Consensus 533 ~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~-~~kl~DfGla~~~~~~~~~~~~~~~~~~~~ 609 (710)
.. .++|.+...++.|+++|++|||+. +++||||||+||+++.++ .++|+|||+++...... ...+...+.+|
T Consensus 101 ~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~y~aP 175 (267)
T PHA03390 101 KKEGKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPS--CYDGTLDYFSP 175 (267)
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecCccceecCCCc--cCCCCCcccCh
Confidence 76 568999999999999999999998 999999999999999988 99999999987653221 11223336678
Q ss_pred hhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCC
Q 005177 610 EFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTP 689 (710)
Q Consensus 610 e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p 689 (710)
|+.....++.++|||||||++|||+||+.|+...... ........... ... . .........+.+++.+|++.+|
T Consensus 176 E~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~-~~~-~---~~~~~~~~~~~~li~~~l~~~p 249 (267)
T PHA03390 176 EKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDE-ELDLESLLKRQ-QKK-L---PFIKNVSKNANDFVQSMLKYNI 249 (267)
T ss_pred hhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcc-hhhHHHHHHhh-ccc-C---CcccccCHHHHHHHHHHhccCh
Confidence 8887778889999999999999999999998733211 10001111111 111 1 1112234567788899999999
Q ss_pred CCCCC-HHHHHH
Q 005177 690 SDRPS-MEEALK 700 (710)
Q Consensus 690 ~~RPs-~~evl~ 700 (710)
++||+ ++|+++
T Consensus 250 ~~R~~~~~~~l~ 261 (267)
T PHA03390 250 NYRLTNYNEIIK 261 (267)
T ss_pred hhCCchHHHHhc
Confidence 99996 688874
|
|
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-31 Score=276.70 Aligned_cols=244 Identities=13% Similarity=0.110 Sum_probs=172.2
Q ss_pred hhhhhcCCCCCccEEEEcCC----CcEEEEEEeeccchh------------HHHHHHHHHHHhccCCCCceeEEEEEEcC
Q 005177 450 ECEEAARPQSAAGCKAVLPT----GITVSVKKIEWGATR------------IKIVSEFITRIGTVRHKNLIRLLGFCYNR 513 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~----g~~vAvK~l~~~~~~------------~~~~~~e~~~l~~l~H~niv~l~g~~~~~ 513 (710)
..+.||+|+||.||+|...+ +..+|+|........ ......+...+..+.|+||+++++++...
T Consensus 16 i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~ 95 (294)
T PHA02882 16 IDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGSFK 95 (294)
T ss_pred EeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeeeEe
Confidence 77899999999999998643 456666654322111 01112233455677899999999987654
Q ss_pred C----ceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccC
Q 005177 514 H----QAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG 587 (710)
Q Consensus 514 ~----~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG 587 (710)
. ..++++|++.. ++.+.+.. ..++.....|+.|+++||+|||+. +|+||||||+|||++.++.++|+|||
T Consensus 96 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~~~~l~DFG 171 (294)
T PHA02882 96 RCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNRGYIIDYG 171 (294)
T ss_pred cCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCcEEEEEcC
Confidence 3 34788887753 66666544 246777889999999999999998 99999999999999999999999999
Q ss_pred ccccccccCC---------CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc---ccc
Q 005177 588 FKYLTQLADG---------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID---GLL 655 (710)
Q Consensus 588 la~~~~~~~~---------~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~---~~~ 655 (710)
+++....... ....++.+|++||...+..++.++|||||||++|||+||+.||............ +..
T Consensus 172 la~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~ 251 (294)
T PHA02882 172 IASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFI 251 (294)
T ss_pred CceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHH
Confidence 9876432110 1112455677889888888999999999999999999999999754221111100 111
Q ss_pred cccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 005177 656 GEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLL 702 (710)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L 702 (710)
.++..+. .. .+ .....+.+++..|+..+|++||+++++.+.+
T Consensus 252 ~~~~~~~-~~-~~---~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 252 KRLHEGK-IK-IK---NANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHhhhhh-hc-cC---CCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 1111111 11 11 1124567888899999999999999999876
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-31 Score=257.72 Aligned_cols=250 Identities=16% Similarity=0.205 Sum_probs=194.2
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhc-cCCCCceeEEEEEEc----CC
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGT-VRHKNLIRLLGFCYN----RH 514 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~-l~H~niv~l~g~~~~----~~ 514 (710)
.++++|+.. .+++|-|-.|.|-.+.. .+|+.+|+|.+.... ..++|++.--. -.|||||.++++|.. ..
T Consensus 58 ~itedY~is-~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~----KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rk 132 (400)
T KOG0604|consen 58 SITEDYSIS-WQVLGAGINGKVVQCVHKRTQEKFALKVLLDSP----KARREVELHWMASGHPHIVSIIDVYENSYQGRK 132 (400)
T ss_pred cchhhheeh-hhhhccccCCceEEEEeccchhhhHHHHHhcCH----HHHhHhhhhhhhcCCCceEEeehhhhhhccCce
Confidence 355666643 48899999999988875 689999999998543 45567766332 359999999999864 45
Q ss_pred ceeEEEeecCCCChhhhhhcCC----CHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC---CCceEEcccC
Q 005177 515 QAYLLYDYLPNGNLSEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLAEFG 587 (710)
Q Consensus 515 ~~~lv~Ey~~~gsL~~~l~~~~----~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~---~~~~kl~DfG 587 (710)
.+.+|||.|+||.|+..+.... ...+.-.|+.||+.|++|||+. .|.||||||+|+|... +...|++|||
T Consensus 133 cLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfG 209 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFG 209 (400)
T ss_pred eeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEecccc
Confidence 6789999999999999997744 3555679999999999999999 9999999999999975 4568999999
Q ss_pred ccccccccC-CCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc-ccccccccccccC
Q 005177 588 FKYLTQLAD-GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GLLGEMYNENEVG 665 (710)
Q Consensus 588 la~~~~~~~-~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~ 665 (710)
+|+...... -..+.-++||.+||+....+++...|+||+||++|-|+.|-.||...... ++. +...++.....-.
T Consensus 210 FAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~---aispgMk~rI~~gqy~F 286 (400)
T KOG0604|consen 210 FAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL---AISPGMKRRIRTGQYEF 286 (400)
T ss_pred cccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCc---cCChhHHhHhhccCccC
Confidence 999765322 23444678899999999999999999999999999999999998743221 111 1112222222223
Q ss_pred CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 666 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 666 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..+.|.+..+..-+++...+..+|++|-|++|+++.
T Consensus 287 P~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 287 PEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred CChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 355677777788899999999999999999999864
|
|
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=268.85 Aligned_cols=239 Identities=16% Similarity=0.193 Sum_probs=183.3
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc------chhHHHHHHHHHHHhccCCCCceeEEEEEEcC--CceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG------ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~------~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ 520 (710)
..+.+|+|++|.||+|.. .+|..||+|.+... ....+.+.+|++++++++||||+++++++.+. +..++||
T Consensus 6 ~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~ 85 (264)
T cd06653 6 LGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFV 85 (264)
T ss_pred eeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEE
Confidence 678999999999999985 57999999988532 12345788899999999999999999998764 4588999
Q ss_pred eecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-
Q 005177 521 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 597 (710)
Q Consensus 521 Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~- 597 (710)
||+++++|.+++.. .+++....+++.|++.|+.|||+. +|+||||||+||+++.++.++|+|||+++.......
T Consensus 86 e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~ 162 (264)
T cd06653 86 EYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMS 162 (264)
T ss_pred EeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcccccccccccccc
Confidence 99999999999865 467888899999999999999998 999999999999999999999999999875432110
Q ss_pred ----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 598 ----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 598 ----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
....+...+.+||+......+.++|||||||++|||++|+.|+.+..... ...+....... +......
T Consensus 163 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~~--~~~p~~~ 234 (264)
T cd06653 163 GTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA------AIFKIATQPTK--PMLPDGV 234 (264)
T ss_pred CccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH------HHHHHHcCCCC--CCCCccc
Confidence 01113344677888877778899999999999999999999986432111 01111110000 1111122
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
...+.+++.+|+. +|.+||+..+++.
T Consensus 235 ~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 235 SDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred CHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 3456788889999 5799999998865
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=266.93 Aligned_cols=240 Identities=16% Similarity=0.192 Sum_probs=189.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.+|+|++|.||++.. .++..||+|++.... ...+.+.+|++.+++++|||++++++.+..++..++||||+++
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~ 83 (258)
T cd08215 4 IIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADG 83 (258)
T ss_pred EEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCC
Confidence 567899999999999986 468999999998643 3466788999999999999999999999999999999999999
Q ss_pred CChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--
Q 005177 526 GNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-- 597 (710)
Q Consensus 526 gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-- 597 (710)
++|.+++.. ..++.+...++.++++|++|||+. +++|+||||+||+++.++.++|+|||++........
T Consensus 84 ~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~ 160 (258)
T cd08215 84 GDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLA 160 (258)
T ss_pred CcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccCccee
Confidence 999999864 357889999999999999999998 999999999999999999999999999876543211
Q ss_pred CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 598 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 598 ~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
....+...+.+||......++.++||||+|++++||++|+.|+...... . .............+. .....+
T Consensus 161 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-~-----~~~~~~~~~~~~~~~---~~~~~~ 231 (258)
T cd08215 161 KTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL-E-----LALKILKGQYPPIPS---QYSSEL 231 (258)
T ss_pred cceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH-H-----HHHHHhcCCCCCCCC---CCCHHH
Confidence 1111333466778777777888999999999999999999998643211 0 011111111001111 122456
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 678 LDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+++.+|+..+|++||++.|+++.
T Consensus 232 ~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 232 RNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred HHHHHHHcCCChhhCcCHHHHhcC
Confidence 788899999999999999999763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=275.24 Aligned_cols=238 Identities=20% Similarity=0.252 Sum_probs=182.0
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.+|+|++|.||+|+. .+|..||+|++.... ...+.+.+|++++++++|||++++++++.+.+..++||||++
T Consensus 25 ~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 104 (313)
T cd06633 25 GLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL 104 (313)
T ss_pred cceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC
Confidence 456799999999999985 578999999997532 224567889999999999999999999999999999999996
Q ss_pred CCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCcc
Q 005177 525 NGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPA 601 (710)
Q Consensus 525 ~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~ 601 (710)
|++.+.+.. .+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++...... ....
T Consensus 105 -~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~--~~~~ 178 (313)
T cd06633 105 -GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSPA--NSFV 178 (313)
T ss_pred -CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCCC--CCcc
Confidence 578777753 568999999999999999999998 9999999999999999999999999987643221 1112
Q ss_pred cccccCchhhhh---ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHH
Q 005177 602 KIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 678 (710)
Q Consensus 602 ~~~~~~~~e~~~---~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (710)
+...+.+||+.. ...++.++|||||||++|||++|+.|+........ ... . .....+. .. .. .....+.
T Consensus 179 ~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~-~~~-~-~~~~~~~-~~-~~---~~~~~l~ 250 (313)
T cd06633 179 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYH-I-AQNDSPT-LQ-SN---EWTDSFR 250 (313)
T ss_pred ccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH-HHH-H-HhcCCCC-CC-cc---ccCHHHH
Confidence 333466777753 34577889999999999999999999864332110 000 0 0000000 00 11 1123467
Q ss_pred HHHhhcCCCCCCCCCCHHHHHHH
Q 005177 679 DVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 679 ~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+++.+|++.+|++||++.|++..
T Consensus 251 ~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 251 GFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred HHHHHHccCChhhCcCHHHHhcC
Confidence 88899999999999999999864
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-31 Score=282.35 Aligned_cols=253 Identities=21% Similarity=0.251 Sum_probs=190.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcCC-----ceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH-----QAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-----~~~lv~ 520 (710)
..+.||+|++|.||+|.. .+|..||||++... ....+.+.+|++.+++++||||+++++++...+ ..|+||
T Consensus 4 i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~ 83 (330)
T cd07834 4 LLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVT 83 (330)
T ss_pred eeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEe
Confidence 567899999999999986 45899999999753 234567889999999999999999999998775 789999
Q ss_pred eecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC--
Q 005177 521 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD-- 596 (710)
Q Consensus 521 Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~-- 596 (710)
||++ ++|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.++|+|||++.......
T Consensus 84 e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~ 159 (330)
T cd07834 84 ELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDE 159 (330)
T ss_pred cchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEeecccccc
Confidence 9998 589998876 468899999999999999999998 99999999999999999999999999987654321
Q ss_pred ---CCCcccccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCc---------------cc--ccccc
Q 005177 597 ---GSFPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KP--IDGLL 655 (710)
Q Consensus 597 ---~~~~~~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~---------------~~--~~~~~ 655 (710)
........++.+||..... .++.++|||||||++|||++|+.|+........ +. .....
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 239 (330)
T cd07834 160 KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKA 239 (330)
T ss_pred cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccch
Confidence 1111234457788877666 788899999999999999999998864321100 00 00000
Q ss_pred cccccccccCCCcc----hHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH--HhccC
Q 005177 656 GEMYNENEVGSSSS----LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL--LSGLK 706 (710)
Q Consensus 656 ~~~~~~~~~~~~~~----~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~--L~~~~ 706 (710)
.+............ ..+....+.+++.+||+.+|++||++++++.+ +++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~ 296 (330)
T cd07834 240 RNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLH 296 (330)
T ss_pred hhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhc
Confidence 00000000000000 11123567889999999999999999999975 55544
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=263.87 Aligned_cols=242 Identities=17% Similarity=0.137 Sum_probs=188.5
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
.|. ....+|.|.-|+||.+.+ .++...|+|++.+... .......|-++|+.+.||.++.||+.++.++..|+|
T Consensus 78 ~f~--llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 78 HFR--LLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHH--HHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence 355 778899999999999997 4468999999987533 245567788999999999999999999999999999
Q ss_pred EeecCCCChhhhhhcC----CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccc-
Q 005177 520 YDYLPNGNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL- 594 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~~----~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~- 594 (710)
||||+||+|....+.+ .+......+|.+|.-||+|||-. |||.|||||+|||+-++|++.++||.++.-...
T Consensus 156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 9999999999988763 35667778899999999999999 999999999999999999999999998532100
Q ss_pred ------c-------------------------C-CC-----------------Ccc--------cccccCchhhhhccCC
Q 005177 595 ------A-------------------------D-GS-----------------FPA--------KIAWTESGEFYNAMKE 617 (710)
Q Consensus 595 ------~-------------------------~-~~-----------------~~~--------~~~~~~~~e~~~~~~~ 617 (710)
. . .. .+. ++..|-+||++.+...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 0 0 00 000 1222446677788888
Q ss_pred ccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCC---
Q 005177 618 EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPS--- 694 (710)
Q Consensus 618 ~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs--- 694 (710)
+.++|.|+|||++|||+.|.-||.+....+. +..++... +. .+...+.+..+.+++.+.+.+||++|--
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~T------l~NIv~~~-l~-Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~r 384 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKET------LRNIVGQP-LK-FPEEPEVSSAAKDLIRKLLVKDPSKRLGSKR 384 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCchhh------HHHHhcCC-Cc-CCCCCcchhHHHHHHHHHhccChhhhhcccc
Confidence 9999999999999999999999986654322 22333222 11 1122245567889999999999999987
Q ss_pred -HHHHH
Q 005177 695 -MEEAL 699 (710)
Q Consensus 695 -~~evl 699 (710)
+.||-
T Consensus 385 GA~eIK 390 (459)
T KOG0610|consen 385 GAAEIK 390 (459)
T ss_pred chHHhh
Confidence 66654
|
|
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.2e-31 Score=272.85 Aligned_cols=247 Identities=22% Similarity=0.261 Sum_probs=186.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
....+|+|++|.||+|+. .+++.||+|.+.... ...+.+..|++++++++||||+++++++.+.+..++||||++
T Consensus 3 ~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~- 81 (282)
T cd07829 3 KLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD- 81 (282)
T ss_pred eehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-
Confidence 456799999999999986 459999999998642 224567789999999999999999999999999999999998
Q ss_pred CChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCc--
Q 005177 526 GNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFP-- 600 (710)
Q Consensus 526 gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~-- 600 (710)
++|.+++.. ..++..+.+++.++++||+|||+. +|+||||||+||++++++.+||+|||+++..........
T Consensus 82 ~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 158 (282)
T cd07829 82 MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHE 158 (282)
T ss_pred cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCcc
Confidence 599999965 468899999999999999999998 999999999999999999999999999876543221111
Q ss_pred ccccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCc---------------ccccccc---cccccc
Q 005177 601 AKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPIDGLL---GEMYNE 661 (710)
Q Consensus 601 ~~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~---------------~~~~~~~---~~~~~~ 661 (710)
....++.+||..... .++.++|||||||++|||++|+.|+........ |...... ......
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (282)
T cd07829 159 VVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPK 238 (282)
T ss_pred ccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccc
Confidence 123346677876555 788899999999999999999888764321100 0000000 000000
Q ss_pred cccC--CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 662 NEVG--SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 662 ~~~~--~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
. .. .....+.....+.+++.+|++.+|++||++.|++..
T Consensus 239 ~-~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 239 F-PPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred c-CccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 0 00 000011123568899999999999999999999763
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=9e-31 Score=280.57 Aligned_cols=253 Identities=21% Similarity=0.284 Sum_probs=185.2
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcC----
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR---- 513 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~---- 513 (710)
+.+.|. ..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|++++.+++||||+++++++...
T Consensus 15 ~~~~y~--~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~ 92 (345)
T cd07877 15 VPERYQ--NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE 92 (345)
T ss_pred ccCceE--EEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccc
Confidence 345566 778899999999999984 679999999997532 2345677899999999999999999988643
Q ss_pred --CceeEEEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccc
Q 005177 514 --HQAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 590 (710)
Q Consensus 514 --~~~~lv~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~ 590 (710)
...++++|++ +++|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 93 ~~~~~~lv~~~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~dfg~~~ 168 (345)
T cd07877 93 EFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 168 (345)
T ss_pred ccccEEEEehhc-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCEEEecccccc
Confidence 3468888887 6899888765 578999999999999999999998 99999999999999999999999999987
Q ss_pred cccccCCCCcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc---------ccccccccccc
Q 005177 591 LTQLADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK---------PIDGLLGEMYN 660 (710)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~---------~~~~~~~~~~~ 660 (710)
........ ..+..++.+||.... ..++.++|||||||++|||++|+.|+......... ........+.+
T Consensus 169 ~~~~~~~~-~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (345)
T cd07877 169 HTDDEMTG-YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 247 (345)
T ss_pred cccccccc-cccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhccc
Confidence 64322111 123344667787654 46788999999999999999999988643211100 00000000000
Q ss_pred c--------cccCCCcchH----HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 661 E--------NEVGSSSSLQ----DEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 661 ~--------~~~~~~~~~~----~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
. .+........ .....+.+++.+|++.||++||++.|++.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 248 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 0 0000000000 113457799999999999999999998864
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-31 Score=280.92 Aligned_cols=252 Identities=20% Similarity=0.269 Sum_probs=185.3
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCC---
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH--- 514 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~--- 514 (710)
+.+.|. ..+.||+|++|.||++.. .+|..||||++.... ...+.+.+|++++++++||||+++++++....
T Consensus 13 ~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07880 13 VPDRYR--DLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD 90 (343)
T ss_pred cccceE--EEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence 334455 778999999999999984 689999999986432 22456778999999999999999999987643
Q ss_pred ---ceeEEEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccc
Q 005177 515 ---QAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 590 (710)
Q Consensus 515 ---~~~lv~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~ 590 (710)
..++||||+ +++|.+++.. ..++.....++.|+++|++|||+. +|+||||||+||+++.++.+|++|||+++
T Consensus 91 ~~~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg~~~ 166 (343)
T cd07880 91 RFHDFYLVMPFM-GTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLAR 166 (343)
T ss_pred ccceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeccccc
Confidence 458999999 6799888865 678999999999999999999998 99999999999999999999999999987
Q ss_pred cccccCCCCcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccc---------cccccccc--
Q 005177 591 LTQLADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP---------IDGLLGEM-- 658 (710)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~---------~~~~~~~~-- 658 (710)
......... ....++.+||.... ..++.++||||+||++||+++|+.|+.......... .......+
T Consensus 167 ~~~~~~~~~-~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (343)
T cd07880 167 QTDSEMTGY-VVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQS 245 (343)
T ss_pred ccccCcccc-ccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcc
Confidence 654221111 22334667776654 457888999999999999999999986432110000 00000000
Q ss_pred ------ccccccCCCcch----HHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 659 ------YNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 659 ------~~~~~~~~~~~~----~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
....+....... ......+.+++.+|++.||++|||+.+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 246 EDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred hhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000000000 112345778999999999999999999984
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=277.36 Aligned_cols=251 Identities=20% Similarity=0.269 Sum_probs=184.5
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEc-CCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYN-RHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-~~~~~l 518 (710)
+.|. ....||+|+||.||++.. .+|..||||++... ....+.+.+|++++.+++|||||++++++.. .+..++
T Consensus 10 ~~y~--~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~l 87 (328)
T cd07856 10 NRYV--DLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYF 87 (328)
T ss_pred cceE--EEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEE
Confidence 3455 678999999999999984 68999999998642 2234667789999999999999999999876 567899
Q ss_pred EEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 519 LYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
||||+ +++|.++++. ..++.....++.|+++||+|||+. +|+||||||+||++++++.+|++|||+++.......
T Consensus 88 v~e~~-~~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~ 163 (328)
T cd07856 88 VTELL-GTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLARIQDPQMT 163 (328)
T ss_pred Eeehh-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCccccccccCCCcC
Confidence 99998 4689988865 567778888999999999999998 999999999999999999999999999875432211
Q ss_pred CCcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc---------ccccccccccc-------
Q 005177 598 SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK---------PIDGLLGEMYN------- 660 (710)
Q Consensus 598 ~~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~---------~~~~~~~~~~~------- 660 (710)
.. .+...+.+||...+ ..++.++|||||||++|||+||+.|+......... +..+......+
T Consensus 164 ~~-~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (328)
T cd07856 164 GY-VSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFV 242 (328)
T ss_pred CC-cccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHH
Confidence 11 12333566776544 46788999999999999999999888643210000 00000000000
Q ss_pred -ccccCCCcchH----HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 661 -ENEVGSSSSLQ----DEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 661 -~~~~~~~~~~~----~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
........... .....+.+++.+|++.+|++||++.|++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 243 QSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred hhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000011 123567889999999999999999999875
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-31 Score=277.40 Aligned_cols=251 Identities=20% Similarity=0.235 Sum_probs=181.6
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCC-----
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----- 514 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----- 514 (710)
++|. ..+.||+|++|.||+|.. .+|+.||||++..... ....+.+|++++++++||||+++++++.+..
T Consensus 8 ~~y~--~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 8 RDYE--ILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred ccEE--EEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 3455 778899999999999985 5789999999875322 2345678999999999999999999876533
Q ss_pred ---ceeEEEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCc
Q 005177 515 ---QAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 588 (710)
Q Consensus 515 ---~~~lv~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl 588 (710)
..++||||+.. ++.+.+.. ..++.....++.|+++||+|||+. +|+||||||+||++++++.+|++|||+
T Consensus 86 ~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 161 (311)
T cd07866 86 KRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFGL 161 (311)
T ss_pred cCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcCcc
Confidence 46999999974 77777653 578999999999999999999998 999999999999999999999999999
Q ss_pred cccccccCCCC-------------cccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCC-------
Q 005177 589 KYLTQLADGSF-------------PAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ------- 647 (710)
Q Consensus 589 a~~~~~~~~~~-------------~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~------- 647 (710)
++......... ..+...+.+||.... ..++.++|||||||++|||++|+.|+.+.....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~ 241 (311)
T cd07866 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFK 241 (311)
T ss_pred chhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 87543211100 012334667776543 457889999999999999999998876432210
Q ss_pred --------cccccccccccccccc-cCCCcch----HHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 648 --------NKPIDGLLGEMYNENE-VGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 648 --------~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
.+..........+... ...+... ......+.+++.+|++.+|++|||+.|++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 242 LCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 0000000000000000 0001111 112246789999999999999999999875
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-31 Score=273.72 Aligned_cols=243 Identities=16% Similarity=0.167 Sum_probs=196.2
Q ss_pred CCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 446 FNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 446 ~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
|..+..+++|+|.||+||-|+. .+|+.||||.|.+-. .+....+.|+++|.+++||.||.|--.|++.+.++.|||
T Consensus 564 YQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVME 643 (888)
T KOG4236|consen 564 YQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVME 643 (888)
T ss_pred HHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEeh
Confidence 4445678999999999999986 789999999998743 346778999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC---CceEEcccCccccccc
Q 005177 522 YLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN---MEPHLAEFGFKYLTQL 594 (710)
Q Consensus 522 y~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~---~~~kl~DfGla~~~~~ 594 (710)
-+. ||..+.|-. .++......++.||..||.|||.. +|+|+|+||+||||.+. -.+|+||||+||+..+
T Consensus 644 Kl~-GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE 719 (888)
T KOG4236|consen 644 KLH-GDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE 719 (888)
T ss_pred hhc-chHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecch
Confidence 995 676666632 344445567889999999999999 99999999999999754 3699999999999865
Q ss_pred cCCC-CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 595 ADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 595 ~~~~-~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
..-. ...+++.|-+||+.....|...-|+||.|||+|--++|..||.++.++.+ ++.+...+-++..|.+.
T Consensus 720 ksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdInd--------QIQNAaFMyPp~PW~ei 791 (888)
T KOG4236|consen 720 KSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDIND--------QIQNAAFMYPPNPWSEI 791 (888)
T ss_pred hhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhH--------HhhccccccCCCchhhc
Confidence 4222 12255568889999999999999999999999999999999987665432 23233322234456777
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
....++++...++..-++|-|.+..+.
T Consensus 792 s~~AidlIn~LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 792 SPEAIDLINNLLQVKMRKRYSVDKSLS 818 (888)
T ss_pred CHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence 788889999999989999998877654
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-31 Score=296.43 Aligned_cols=247 Identities=19% Similarity=0.258 Sum_probs=179.2
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcC----
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR---- 513 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~---- 513 (710)
....+|. +..++|+||||.|||++- -||+.+|||+|.... .......+|++.+++++|||||+++..+.+.
T Consensus 476 RY~~DFE--EL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~ 553 (1351)
T KOG1035|consen 476 RYLNDFE--ELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAEL 553 (1351)
T ss_pred hHhhhhH--HHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcc
Confidence 4455677 899999999999999984 589999999998753 2345577899999999999999988544210
Q ss_pred --------------------------------------------------------------------------------
Q 005177 514 -------------------------------------------------------------------------------- 513 (710)
Q Consensus 514 -------------------------------------------------------------------------------- 513 (710)
T Consensus 554 ~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~t 633 (1351)
T KOG1035|consen 554 TVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNT 633 (1351)
T ss_pred ccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccc
Confidence
Q ss_pred -----------------------------------CceeEEEeecCCCChhhhhhcCCC---HHHHHHHHHHHHHHHHHH
Q 005177 514 -----------------------------------HQAYLLYDYLPNGNLSEKIRTKRD---WAAKYKIVLGVARGLCFL 555 (710)
Q Consensus 514 -----------------------------------~~~~lv~Ey~~~gsL~~~l~~~~~---~~~~~~i~~~ia~gL~yL 555 (710)
...||=||||+...+.++++...- -...+++..+|++||+|+
T Consensus 634 S~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYI 713 (1351)
T KOG1035|consen 634 SDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYI 713 (1351)
T ss_pred cccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHH
Confidence 013577889988777777765322 345689999999999999
Q ss_pred hcCCCCCceecCCCCCCeEecCCCceEEcccCcccccc------c-----------cCC-C--CcccccccCchhhhhcc
Q 005177 556 HHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ------L-----------ADG-S--FPAKIAWTESGEFYNAM 615 (710)
Q Consensus 556 H~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~------~-----------~~~-~--~~~~~~~~~~~e~~~~~ 615 (710)
|+. +||||||||.||+||++..+||+|||+|.... . ... . ...+++.|++||+....
T Consensus 714 H~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~ 790 (1351)
T KOG1035|consen 714 HDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDT 790 (1351)
T ss_pred HhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccc
Confidence 999 99999999999999999999999999987611 0 000 1 11156678889887654
Q ss_pred ---CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCC
Q 005177 616 ---KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDR 692 (710)
Q Consensus 616 ---~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~R 692 (710)
+|+.|+|+||+|||++||+. ||...+... ..+....++.....+..+.+.+..-..++..+++.||.+|
T Consensus 791 ~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa-----~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kR 862 (1351)
T KOG1035|consen 791 SSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERA-----SILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKR 862 (1351)
T ss_pred ccccccchhhhHHHHHHHHHHhc---cCCchHHHH-----HHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccC
Confidence 59999999999999999976 444322111 1112222222111111123334444577788999999999
Q ss_pred CCHHHHHH
Q 005177 693 PSMEEALK 700 (710)
Q Consensus 693 Ps~~evl~ 700 (710)
||+.|+++
T Consensus 863 PtA~eLL~ 870 (1351)
T KOG1035|consen 863 PTATELLN 870 (1351)
T ss_pred CCHHHHhh
Confidence 99999875
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.6e-31 Score=280.86 Aligned_cols=191 Identities=19% Similarity=0.187 Sum_probs=158.9
Q ss_pred hhhhhcCCCCCccEEEE-cCCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcC------CceeEEE
Q 005177 450 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR------HQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~-~~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~------~~~~lv~ 520 (710)
..+.+|+|+||.||+|+ -.+|..||||..+... ...+...+|+++|++++|||||+++|.-.+. +...+||
T Consensus 17 ~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvm 96 (732)
T KOG4250|consen 17 MDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVM 96 (732)
T ss_pred ehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEE
Confidence 56789999999999999 5889999999998632 3467788999999999999999999876543 3578999
Q ss_pred eecCCCChhhhhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec--CCCc--eEEcccCcccc
Q 005177 521 DYLPNGNLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD--ENME--PHLAEFGFKYL 591 (710)
Q Consensus 521 Ey~~~gsL~~~l~~-----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~--~~~~--~kl~DfGla~~ 591 (710)
|||++|||+..+.. .++..+.+.+..+++.||.|||+. +|+||||||.||++- ++|+ -||+|||.||.
T Consensus 97 EyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Are 173 (732)
T KOG4250|consen 97 EYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARE 173 (732)
T ss_pred eecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeeccccccc
Confidence 99999999999976 578888999999999999999988 999999999999985 3343 69999999998
Q ss_pred ccccCCCCc-ccccccCchhhhh-ccCCccccceeeHHHHHHHHHhCCCCCCCC
Q 005177 592 TQLADGSFP-AKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAG 643 (710)
Q Consensus 592 ~~~~~~~~~-~~~~~~~~~e~~~-~~~~~~~~DVySfGvvl~Elltg~~p~~~~ 643 (710)
.+......+ .++.-|-.||.+. ...++..+|.|||||++||.+||..||-..
T Consensus 174 l~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~ 227 (732)
T KOG4250|consen 174 LDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF 227 (732)
T ss_pred CCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence 764432111 1333355667777 477888999999999999999999998743
|
|
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=265.22 Aligned_cols=231 Identities=15% Similarity=0.132 Sum_probs=181.9
Q ss_pred hcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCCh
Q 005177 454 AARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 454 ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
+|+|++|.||++.. .+|+.+|+|.+..... ....+.+|++++++++||||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 68999999999986 4689999999886432 355788999999999999999999999999999999999999999
Q ss_pred hhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC--CCCccccc
Q 005177 529 SEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--GSFPAKIA 604 (710)
Q Consensus 529 ~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~--~~~~~~~~ 604 (710)
.+++.. .+++.....++.|+++|+.|+|+. +++|+||||+||+++.++.++++|||++....... ........
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~ 157 (250)
T cd05123 81 FSHLSKEGRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTP 157 (250)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCc
Confidence 999976 468889999999999999999997 99999999999999999999999999987653321 11112233
Q ss_pred ccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhc
Q 005177 605 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 684 (710)
Q Consensus 605 ~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 684 (710)
.+.+||.......+.++|+||||+++||+++|+.|+...... . ....+.... ...+... ...+.+++.+|
T Consensus 158 ~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~-~-----~~~~~~~~~-~~~~~~~---~~~l~~~i~~~ 227 (250)
T cd05123 158 EYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRK-E-----IYEKILKDP-LRFPEFL---SPEARDLISGL 227 (250)
T ss_pred cccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-H-----HHHHHhcCC-CCCCCCC---CHHHHHHHHHH
Confidence 466778777777888999999999999999999998643210 0 011111111 1111111 24567889999
Q ss_pred CCCCCCCCCCHHH
Q 005177 685 TRSTPSDRPSMEE 697 (710)
Q Consensus 685 l~~~p~~RPs~~e 697 (710)
+..||++||++.+
T Consensus 228 l~~~p~~R~~~~~ 240 (250)
T cd05123 228 LQKDPTKRLGSGG 240 (250)
T ss_pred hcCCHhhCCCccc
Confidence 9999999999943
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=267.38 Aligned_cols=238 Identities=14% Similarity=0.135 Sum_probs=179.5
Q ss_pred hhhhhcCCCCCccEEEEcC-CCcEEEEEEeecc------chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWG------ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~-~g~~vAvK~l~~~------~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
..+.||+|+||.||++... .+..+++|.++.. ......+..|+.++++++||||+++++++.+.+..++||||
T Consensus 4 i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (260)
T cd08222 4 LQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEY 83 (260)
T ss_pred eeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEe
Confidence 5678999999999999853 3445556655431 11234566788999999999999999999998999999999
Q ss_pred cCCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC
Q 005177 523 LPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 523 ~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 596 (710)
+++++|.+++.. ..++.....++.|+++|+.|||+. +++|+||||+||++++ +.+|++|||+++......
T Consensus 84 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~ 159 (260)
T cd08222 84 CEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC 159 (260)
T ss_pred CCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence 999999988853 468899999999999999999998 9999999999999985 569999999987653221
Q ss_pred CC--CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 597 GS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 597 ~~--~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
.. ...+...+.+||......++.++||||||+++|||++|+.|+.+..... ......... . +.......
T Consensus 160 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~------~~~~~~~~~-~--~~~~~~~~ 230 (260)
T cd08222 160 DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS------VVLRIVEGP-T--PSLPETYS 230 (260)
T ss_pred ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH------HHHHHHcCC-C--CCCcchhc
Confidence 11 1112333667888777778889999999999999999999886332111 001111111 0 01112233
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
..+.+++.+|+..+|++||++.|+++
T Consensus 231 ~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 231 RQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 56778999999999999999999976
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-31 Score=282.23 Aligned_cols=252 Identities=22% Similarity=0.289 Sum_probs=186.4
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCc---
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ--- 515 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~--- 515 (710)
.++|. ....||+|++|.||+|.. .++..||||++... ....+.+.+|+.++++++||||+++++++...+.
T Consensus 14 ~~~y~--~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 14 PDRYQ--NLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cCceE--EEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 34455 678899999999999986 56889999998753 2234567789999999999999999998876554
Q ss_pred ---eeEEEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 516 ---AYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 516 ---~~lv~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
.++|+||+ +++|.+++.. .+++.....++.|+++|++|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg~~~~ 167 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGLARH 167 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccccccc
Confidence 89999999 5699998876 578999999999999999999998 999999999999999999999999999876
Q ss_pred ccccCCCCcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccc---------cccccc-----
Q 005177 592 TQLADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP---------IDGLLG----- 656 (710)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~---------~~~~~~----- 656 (710)
........ .....+.+||.... ..++.++|||||||++|||+||+.|+.+........ ......
T Consensus 168 ~~~~~~~~-~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 246 (343)
T cd07851 168 TDDEMTGY-VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSE 246 (343)
T ss_pred ccccccCC-cccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccch
Confidence 53221111 22334667776643 467889999999999999999999986433211000 000000
Q ss_pred ---ccccccccCCCcch----HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 657 ---EMYNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 657 ---~~~~~~~~~~~~~~----~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
......+....... ......+.+++.+|++.+|++|||+.|+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 247 SARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred hHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 00000000000001 1124567899999999999999999999763
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-31 Score=279.48 Aligned_cols=327 Identities=23% Similarity=0.188 Sum_probs=192.0
Q ss_pred EEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEEC
Q 005177 77 VVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDA 156 (710)
Q Consensus 77 v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L 156 (710)
+..+|++.+.++..=+..+.+ +++|+.++|.+|.++ .||.......+|+.|+|.+|.|+..-.+++..++.|+.|||
T Consensus 80 t~~LdlsnNkl~~id~~~f~n--l~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDL 156 (873)
T KOG4194|consen 80 TQTLDLSNNKLSHIDFEFFYN--LPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDL 156 (873)
T ss_pred eeeeeccccccccCcHHHHhc--CCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhh
Confidence 344666666655433333334 667777777777775 56655455556777777777777666667777777788888
Q ss_pred CCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccccccccccccccccccccc
Q 005177 157 FSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGN 236 (710)
Q Consensus 157 ~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~ 236 (710)
|.|.|+..--..|..-.++++|+|++|.++..-...|.++.+|.+|.|+.|+++...+..|.+|++|+.|+|..|++.-.
T Consensus 157 SrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~iriv 236 (873)
T KOG4194|consen 157 SRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIV 236 (873)
T ss_pred hhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeee
Confidence 88877754445566667788888888888766666777888888888888888766666677788888888887766422
Q ss_pred CCccccCCCccchhccccccCCc------------------------cCchhccCCCCCcEEEccccccCCCCCccccCC
Q 005177 237 IPWQLGNMSEVQYLDIAGANLSG------------------------SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRV 292 (710)
Q Consensus 237 ~p~~l~~l~~L~~L~ls~n~l~g------------------------~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l 292 (710)
--..|..+.+|+.|.|..|++.. .-..++.++++|+.|+||.|.+...-+..++..
T Consensus 237 e~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsft 316 (873)
T KOG4194|consen 237 EGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFT 316 (873)
T ss_pred hhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhc
Confidence 12234444444444444444443 333334444444444444444444444444444
Q ss_pred CCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCc---ccCCCCCCcE
Q 005177 293 TTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPE---NLGRNSKLRW 369 (710)
Q Consensus 293 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~---~l~~~~~L~~ 369 (710)
++|+.|+|++|+++...+.+|..+..|+.|+|++|.+...--..|..+.+|+.|||++|.+++.+.+ .+..+++|+.
T Consensus 317 qkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~Lrk 396 (873)
T KOG4194|consen 317 QKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRK 396 (873)
T ss_pred ccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhh
Confidence 4444444444444444444444444444444444444433333444555566666666655544432 2444566666
Q ss_pred EECCCCcCCccCcccccCCCceeeEecccCCcccchh
Q 005177 370 VDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 370 L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~l~g~i~ 406 (710)
|++.+|++...--..+..+..|+.|+|.+|.+..+-|
T Consensus 397 L~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~ 433 (873)
T KOG4194|consen 397 LRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQP 433 (873)
T ss_pred eeecCceeeecchhhhccCcccceecCCCCcceeecc
Confidence 6666666653222345556666777776666655443
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=262.85 Aligned_cols=218 Identities=17% Similarity=0.074 Sum_probs=167.9
Q ss_pred CCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChhhhhhc-
Q 005177 457 PQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRT- 534 (710)
Q Consensus 457 g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~~~l~~- 534 (710)
|.+|.||++.. .+|+.||+|++.... .+.+|...+....||||+++++++.+.+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~ 79 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKF 79 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHh
Confidence 78999999985 678999999997543 233445555566799999999999999999999999999999998865
Q ss_pred -CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCcccccccCchhhhh
Q 005177 535 -KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYN 613 (710)
Q Consensus 535 -~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~e~~~ 613 (710)
.+++.....++.|+++||+|||+. +|+||||||+||+++.++.++++|||.+.......... .....+.+||...
T Consensus 80 ~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~-~~~~~y~aPE~~~ 155 (237)
T cd05576 80 LNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGE-AVENMYCAPEVGG 155 (237)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccccccC-CcCccccCCcccC
Confidence 478899999999999999999998 99999999999999999999999999876543221111 1223356778777
Q ss_pred ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCC
Q 005177 614 AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRP 693 (710)
Q Consensus 614 ~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RP 693 (710)
...++.++||||+||++|||++|+.|+........ .... ...+. .....+.+++.+|++.||++||
T Consensus 156 ~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~--------~~~~---~~~~~---~~~~~~~~li~~~l~~dp~~R~ 221 (237)
T cd05576 156 ISEETEACDWWSLGAILFELLTGKTLVECHPSGIN--------THTT---LNIPE---WVSEEARSLLQQLLQFNPTERL 221 (237)
T ss_pred CCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc--------cccc---cCCcc---cCCHHHHHHHHHHccCCHHHhc
Confidence 77788899999999999999999877542211000 0000 00011 1224567888899999999999
Q ss_pred CHH
Q 005177 694 SME 696 (710)
Q Consensus 694 s~~ 696 (710)
++.
T Consensus 222 ~~~ 224 (237)
T cd05576 222 GAG 224 (237)
T ss_pred CCC
Confidence 973
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.3e-31 Score=271.97 Aligned_cols=238 Identities=19% Similarity=0.199 Sum_probs=186.9
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc----chhHHHHHHHHHHHhccC-CCCceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG----ATRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~----~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
..+.||+|++|.||+|.. .+|..||+|.+... ....+.+.+|++++.+++ ||||+++++++.+.+..++||||+
T Consensus 5 ~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (280)
T cd05581 5 FGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYA 84 (280)
T ss_pred EeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCC
Confidence 567899999999999986 57999999998753 223567888999999999 999999999999999999999999
Q ss_pred CCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC---
Q 005177 524 PNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--- 598 (710)
Q Consensus 524 ~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--- 598 (710)
++++|.+++.. .+++.....++.|++.||+|||+. +++|+||||+||+++.++.++++|||++.........
T Consensus 85 ~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~ 161 (280)
T cd05581 85 PNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESN 161 (280)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccCCccccccC
Confidence 99999999976 478999999999999999999998 9999999999999999999999999998754322110
Q ss_pred -------------------CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccc
Q 005177 599 -------------------FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMY 659 (710)
Q Consensus 599 -------------------~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~ 659 (710)
...+...+.+||......++.++||||||++++|+++|+.|+....... ....+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~ 235 (280)
T cd05581 162 KGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL------TFQKIL 235 (280)
T ss_pred CCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH------HHHHHH
Confidence 0011233566787766778889999999999999999999987433111 011111
Q ss_pred cccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCH----HHHHH
Q 005177 660 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSM----EEALK 700 (710)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~----~evl~ 700 (710)
+.. ...+. .....+.+++.+|++.+|++||++ +|+++
T Consensus 236 ~~~-~~~~~---~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 236 KLE-YSFPP---NFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred hcC-CCCCC---ccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 111 11111 123457789999999999999999 77654
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-32 Score=282.05 Aligned_cols=325 Identities=21% Similarity=0.201 Sum_probs=285.9
Q ss_pred CCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCE
Q 005177 74 NTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLV 153 (710)
Q Consensus 74 ~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~ 153 (710)
.++++.++|..+-++..-..++.. ++.|+.||||.|.|+..--++|..-.++++|+|++|+|+..--+.|.++.+|.+
T Consensus 124 sghl~~L~L~~N~I~sv~se~L~~--l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~t 201 (873)
T KOG4194|consen 124 SGHLEKLDLRHNLISSVTSEELSA--LPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLT 201 (873)
T ss_pred ccceeEEeeeccccccccHHHHHh--HhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchhee
Confidence 467888888888777554555555 889999999999998544456667789999999999999888889999999999
Q ss_pred EECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccc
Q 005177 154 LDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFY 233 (710)
Q Consensus 154 L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~ 233 (710)
|.|+.|+++...+..|.+|++|+.|+|..|++.-.--..|.+|++|+.|.|..|.++..-...|..+.++++|+|..|++
T Consensus 202 lkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l 281 (873)
T KOG4194|consen 202 LKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRL 281 (873)
T ss_pred eecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchh
Confidence 99999999977778888899999999999999744456799999999999999999877778889999999999999999
Q ss_pred cccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccc
Q 005177 234 QGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESF 313 (710)
Q Consensus 234 ~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 313 (710)
+..-..++.++++|+.|++|.|.+...-++.+.-.++|++|+|+.|+++...+..|..+..|+.|+|++|+++..--..|
T Consensus 282 ~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af 361 (873)
T KOG4194|consen 282 QAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAF 361 (873)
T ss_pred hhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHH
Confidence 87777778899999999999999998889999999999999999999999889999999999999999999997777789
Q ss_pred cCCCCCCEEEcccccCcccCCc---ccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCc
Q 005177 314 ADLKNLRLLSLMYNEMSGTVPE---SLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGV 390 (710)
Q Consensus 314 ~~l~~L~~L~Ls~N~l~g~~p~---~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~ 390 (710)
..+++|+.|||++|.++..+-+ .|..+++|+.|++.+|++.......+..+..|+.|||.+|.+...-|..|..+ .
T Consensus 362 ~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~ 440 (873)
T KOG4194|consen 362 VGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-E 440 (873)
T ss_pred HHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-h
Confidence 9999999999999999977643 47789999999999999996555789999999999999999998778777776 8
Q ss_pred eeeEecccCCc
Q 005177 391 LFKLILFSNNF 401 (710)
Q Consensus 391 L~~l~l~~N~l 401 (710)
|..|.+.+-+|
T Consensus 441 Lk~Lv~nSssf 451 (873)
T KOG4194|consen 441 LKELVMNSSSF 451 (873)
T ss_pred hhhhhhcccce
Confidence 88888766544
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-31 Score=253.10 Aligned_cols=248 Identities=19% Similarity=0.310 Sum_probs=183.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcC--------Ccee
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNR--------HQAY 517 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--------~~~~ 517 (710)
....+|+|.||.||||.. .+|+.||+|++-.... -.....+|+++|..++|+|++.++..|... ..+|
T Consensus 21 k~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~y 100 (376)
T KOG0669|consen 21 KLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFY 100 (376)
T ss_pred HHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceee
Confidence 678899999999999985 5688899998754211 133456789999999999999999988652 3589
Q ss_pred EEEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccc
Q 005177 518 LLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 594 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~ 594 (710)
+||++|+. ||...|.+ ..+..+..+++.++..||.|+|+. .|+|||+|++|+||+.++..|++|||+++.+..
T Consensus 101 lVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGlar~fs~ 176 (376)
T KOG0669|consen 101 LVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGLARAFST 176 (376)
T ss_pred eeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeeccccccceec
Confidence 99999986 89998876 457788899999999999999999 999999999999999999999999999987643
Q ss_pred cCCC----Cc--ccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCC---------------Cccccc
Q 005177 595 ADGS----FP--AKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSL---------------QNKPID 652 (710)
Q Consensus 595 ~~~~----~~--~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~---------------~~~~~~ 652 (710)
.... +. ..+-||.+||...+ ..++.+.|||..|||+.||.||.+.+.+.... ..|+..
T Consensus 177 ~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~ 256 (376)
T KOG0669|consen 177 SKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNV 256 (376)
T ss_pred ccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCc
Confidence 2211 11 13557888887654 56899999999999999999987766533221 122221
Q ss_pred cccc--ccccccccC--CCcchHHHHH------HHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 653 GLLG--EMYNENEVG--SSSSLQDEIK------LVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 653 ~~~~--~~~~~~~~~--~~~~~~~~~~------~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..+. +.+...+++ ......+... ..++++.+.+..||.+|+++.+++++
T Consensus 257 d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 257 DNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred ccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 1100 000000010 0111122222 57788889999999999999998864
|
|
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=252.82 Aligned_cols=248 Identities=19% Similarity=0.184 Sum_probs=188.5
Q ss_pred hhhhhcCCCCCccEEEE-cCCCcEEEEEEeeccch-hHHHHHHHHHHHhccC-CCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT-RIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~-~~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+++|+|+|+.|--++ +.+|..+|||.+.+... .+....+|++++.+.+ |+||++|++||+++..+|||||-|.||
T Consensus 82 t~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GG 161 (463)
T KOG0607|consen 82 TSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGG 161 (463)
T ss_pred HHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCc
Confidence 45889999999998887 68999999999987533 4566778899988775 999999999999999999999999999
Q ss_pred Chhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC---ceEEcccCccccccccCC----
Q 005177 527 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM---EPHLAEFGFKYLTQLADG---- 597 (710)
Q Consensus 527 sL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~---~~kl~DfGla~~~~~~~~---- 597 (710)
+|..+|++ ..+..+..+++.+||.||.|||.+ +|.|||+||+|||-.+.. .+||+||.++.-......
T Consensus 162 plLshI~~~~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spa 238 (463)
T KOG0607|consen 162 PLLSHIQKRKHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPA 238 (463)
T ss_pred hHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCC
Confidence 99999976 446667789999999999999999 999999999999987543 489999988643221111
Q ss_pred -----CCcccccccCchhhhh-----ccCCccccceeeHHHHHHHHHhCCCCCCCCC-CCCccccc--------cccccc
Q 005177 598 -----SFPAKIAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGS-SLQNKPID--------GLLGEM 658 (710)
Q Consensus 598 -----~~~~~~~~~~~~e~~~-----~~~~~~~~DVySfGvvl~Elltg~~p~~~~~-~~~~~~~~--------~~~~~~ 658 (710)
..+.+.+.+++||+.. ...|+.+.|.||+|||+|-|++|-.||.+.- ....|... ..+..+
T Consensus 239 stP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesI 318 (463)
T KOG0607|consen 239 STPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESI 318 (463)
T ss_pred CCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHH
Confidence 1122333445555432 3457888999999999999999999988432 23455543 122233
Q ss_pred ccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 659 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
-+...-.+...|.....+.-+++...+..||.+|-++.++++
T Consensus 319 QEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 319 QEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred hccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 333322233445556667778888888999999999998876
|
|
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=278.79 Aligned_cols=248 Identities=20% Similarity=0.261 Sum_probs=180.4
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcC--------------
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR-------------- 513 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-------------- 513 (710)
..+.||.|+||.||+|.. .+|..||+|.+.... ...+.+.+|++++++++||||+++++++...
T Consensus 9 ~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~ 88 (342)
T cd07854 9 DLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTEL 88 (342)
T ss_pred EEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccccccc
Confidence 678899999999999985 678999999987643 2356688899999999999999999876553
Q ss_pred CceeEEEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC-CCceEEcccCcccc
Q 005177 514 HQAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-NMEPHLAEFGFKYL 591 (710)
Q Consensus 514 ~~~~lv~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~-~~~~kl~DfGla~~ 591 (710)
...++||||++ ++|.+++.. .+++.....++.|+++||+|||+. +|+||||||+||+++. ++.+|++|||+++.
T Consensus 89 ~~~~lv~e~~~-~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~kl~dfg~~~~ 164 (342)
T cd07854 89 NSVYIVQEYME-TDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLKIGDFGLARI 164 (342)
T ss_pred ceEEEEeeccc-ccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEEECCccccee
Confidence 35789999997 589888864 578889999999999999999998 9999999999999984 56789999999875
Q ss_pred ccccCC-----CCcccccccCchhhhh-ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc-------cc------c
Q 005177 592 TQLADG-----SFPAKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK-------PI------D 652 (710)
Q Consensus 592 ~~~~~~-----~~~~~~~~~~~~e~~~-~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~-------~~------~ 652 (710)
...... ....+..++.+||... ...++.++|||||||++|||++|+.|+......... +. .
T Consensus 165 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (342)
T cd07854 165 VDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRN 244 (342)
T ss_pred cCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhh
Confidence 432111 0111233466778654 345788999999999999999999998643211100 00 0
Q ss_pred cc---ccc-cccccccCCCc---chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 653 GL---LGE-MYNENEVGSSS---SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 653 ~~---~~~-~~~~~~~~~~~---~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.. ... +.........+ .......++.+++.+|++.||++|||+.|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 245 ELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred hhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 00 000 00000000000 001123457789999999999999999999853
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.4e-30 Score=289.71 Aligned_cols=242 Identities=23% Similarity=0.323 Sum_probs=186.1
Q ss_pred hhhcCCCCCccEEEEc----CC----CcEEEEEEeeccc--hhHHHHHHHHHHHhccC-CCCceeEEEEEEcCCceeEEE
Q 005177 452 EEAARPQSAAGCKAVL----PT----GITVSVKKIEWGA--TRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~----~~----g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ 520 (710)
+.+|+|.||.|++|.. +. ...||||.++... .+.+.+..|+++|+.+. |||||.++|+|..++..++|+
T Consensus 302 ~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~ 381 (609)
T KOG0200|consen 302 KYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIV 381 (609)
T ss_pred ceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEE
Confidence 4899999999999974 22 4589999998753 34778999999999875 999999999999999999999
Q ss_pred eecCCCChhhhhhc-C-----------------CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceE
Q 005177 521 DYLPNGNLSEKIRT-K-----------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 582 (710)
Q Consensus 521 Ey~~~gsL~~~l~~-~-----------------~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~k 582 (710)
||+..|+|.++++. . +.....+.++.|||+|++||++. +++|||+-++|||+.++..+|
T Consensus 382 Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNVLi~~~~~~k 458 (609)
T KOG0200|consen 382 EYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNVLITKNKVIK 458 (609)
T ss_pred EeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhEEecCCCEEE
Confidence 99999999999975 2 45566789999999999999999 999999999999999999999
Q ss_pred EcccCccccccccCCC----Cc--ccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccc
Q 005177 583 LAEFGFKYLTQLADGS----FP--AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLG 656 (710)
Q Consensus 583 l~DfGla~~~~~~~~~----~~--~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~ 656 (710)
|+|||+||........ .. ....|+++ |......++.|+|||||||+|||++|.+.+...+.... .....
T Consensus 459 IaDFGlar~~~~~~~y~~~~~~~~LP~kWmAp-Esl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~----~~l~~ 533 (609)
T KOG0200|consen 459 IADFGLARDHYNKDYYRTKSSAGTLPVKWMAP-ESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT----EELLE 533 (609)
T ss_pred EccccceeccCCCCceEecCCCCccceeecCH-HHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH----HHHHH
Confidence 9999999853321110 11 23446655 66666889999999999999999999654433322100 11111
Q ss_pred ccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhc
Q 005177 657 EMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 704 (710)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~ 704 (710)
.+.+...+..+.. ...++.+++..||+.+|++||++.|+++.++.
T Consensus 534 ~l~~G~r~~~P~~---c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~ 578 (609)
T KOG0200|consen 534 FLKEGNRMEQPEH---CSDEIYDLMKSCWNADPEDRPTFSECVEFFEK 578 (609)
T ss_pred HHhcCCCCCCCCC---CCHHHHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence 1111111111222 24567789999999999999999999998876
|
|
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-30 Score=273.32 Aligned_cols=247 Identities=22% Similarity=0.245 Sum_probs=177.8
Q ss_pred hhhhhcCCCCCccEEEEc-CC--CcEEEEEEeecc---chhHHHHHHHHHHHhccC-CCCceeEEEEEEcC----CceeE
Q 005177 450 ECEEAARPQSAAGCKAVL-PT--GITVSVKKIEWG---ATRIKIVSEFITRIGTVR-HKNLIRLLGFCYNR----HQAYL 518 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~--g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~----~~~~l 518 (710)
..+.||+|+||.||++.. .+ +..||+|++... ....+.+.+|++++.+++ ||||+++++++... ...++
T Consensus 4 ~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 83 (332)
T cd07857 4 LIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYL 83 (332)
T ss_pred EEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEE
Confidence 557899999999999986 34 789999998742 222456778999999995 99999999976432 45789
Q ss_pred EEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC
Q 005177 519 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 596 (710)
++||+. ++|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~ 159 (332)
T cd07857 84 YEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLARGFSENP 159 (332)
T ss_pred EEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCceeccccc
Confidence 999986 689998864 568889999999999999999998 99999999999999999999999999987543211
Q ss_pred CC------CcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc---------ccccccccccc
Q 005177 597 GS------FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK---------PIDGLLGEMYN 660 (710)
Q Consensus 597 ~~------~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~---------~~~~~~~~~~~ 660 (710)
.. ...+...+.+||.... ..++.++||||+||++|||++|+.|+......... .......++..
T Consensus 160 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (332)
T cd07857 160 GENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGS 239 (332)
T ss_pred ccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhh
Confidence 10 0112334667786554 46788999999999999999999887643211000 00000000000
Q ss_pred -----------ccc-cCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 661 -----------ENE-VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 661 -----------~~~-~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
... .............+.+++.+|++.+|++|||+.|++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 240 PKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred hhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000 0000000111346778999999999999999999875
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.6e-31 Score=266.21 Aligned_cols=240 Identities=14% Similarity=0.106 Sum_probs=186.9
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
.|+ .-.++|+|+||.||-+.. .+|+.+|.|++.+.. ........|-++|.++..|.||.+--.|.+++..++|
T Consensus 186 ~F~--~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 186 TFR--VYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred cee--eeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 355 667899999999999875 789999999997532 2345567788999999999999998889999999999
Q ss_pred EeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 520 YDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
+..|.||||.-+|.+ ..+..+...++.+|+.||++||.+ +||.||+||+|||||++|+++|+|.|+|-.....
T Consensus 264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g 340 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIPEG 340 (591)
T ss_pred EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence 999999999988865 347778889999999999999999 9999999999999999999999999999765433
Q ss_pred CCCCc-ccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 596 DGSFP-AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 596 ~~~~~-~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
..... .++..|++||+.....|+...|.||+||++|||+.|+.||.....-..+ +.+.+.+.......+..+ .
T Consensus 341 ~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~---eEvdrr~~~~~~ey~~kF---S 414 (591)
T KOG0986|consen 341 KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKR---EEVDRRTLEDPEEYSDKF---S 414 (591)
T ss_pred CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhH---HHHHHHHhcchhhccccc---C
Confidence 22222 3566688899999989999999999999999999999998743322111 111122111111222222 3
Q ss_pred HHHHHHHhhcCCCCCCCCCCH
Q 005177 675 KLVLDVALLCTRSTPSDRPSM 695 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~ 695 (710)
++..++....++.||++|--.
T Consensus 415 ~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 415 EEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred HHHHHHHHHHHccCHHHhccC
Confidence 344556666788999999653
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7e-30 Score=259.73 Aligned_cols=252 Identities=19% Similarity=0.218 Sum_probs=181.1
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHh--ccCCCCceeEEEEEEcC----CceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIG--TVRHKNLIRLLGFCYNR----HQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~--~l~H~niv~l~g~~~~~----~~~~lv~Ey~ 523 (710)
..+.||+|.||.|++|.+ .|+.||||.+... +++.+.+|.++.. .+||+||..+++.=..+ .+.+||+||.
T Consensus 215 L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~sr--dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYH 291 (513)
T KOG2052|consen 215 LQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSR--DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYH 291 (513)
T ss_pred EEEEecCccccceeeccc-cCCceEEEEeccc--chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecc
Confidence 678899999999999998 7888999999743 3455666666654 57999999999875432 2789999999
Q ss_pred CCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcC-----CCCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 524 PNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHD-----CYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 524 ~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~-----~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
++|||+|+|.. .++-...++++..+|.||+|||.. ..|.|.|||||+.|||+..++.+.|+|+|+|-.......
T Consensus 292 e~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~ 371 (513)
T KOG2052|consen 292 EHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTD 371 (513)
T ss_pred cCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCC
Confidence 99999999976 678888999999999999999964 358999999999999999999999999999854432211
Q ss_pred ------CCcccccccCchhhhhc-cCC-----ccccceeeHHHHHHHHHhC----------CCCCCCCCCCCcccccccc
Q 005177 598 ------SFPAKIAWTESGEFYNA-MKE-----EMYMDVYGFGEIILEILTN----------GRLTNAGSSLQNKPIDGLL 655 (710)
Q Consensus 598 ------~~~~~~~~~~~~e~~~~-~~~-----~~~~DVySfGvvl~Elltg----------~~p~~~~~~~~~~~~~~~~ 655 (710)
....++..|++||+... ... -..+||||||.|+||++.+ +.||.+-.+ ..+..+.+
T Consensus 372 ~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp--~DPs~eeM 449 (513)
T KOG2052|consen 372 TIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVP--SDPSFEEM 449 (513)
T ss_pred cccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCC--CCCCHHHH
Confidence 11224455677776542 111 1237999999999999764 223332111 00111111
Q ss_pred cccccccccC--CCcch--HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 656 GEMYNENEVG--SSSSL--QDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 656 ~~~~~~~~~~--~~~~~--~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
.+++-..... .+..+ .+.+..+.+++..||..+|..|-|+--+-+.|.++.
T Consensus 450 rkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~ 504 (513)
T KOG2052|consen 450 RKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLS 504 (513)
T ss_pred hcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHh
Confidence 2221111111 11111 345677889999999999999999988888777664
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-32 Score=287.16 Aligned_cols=298 Identities=27% Similarity=0.380 Sum_probs=159.7
Q ss_pred CcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCC-CCCChhhcCCCCCCEEECCCCCCCcCCchhcc
Q 005177 92 PGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFS-GHFPGGIQSLRNLLVLDAFSNSFSGSVPAEIS 170 (710)
Q Consensus 92 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~ 170 (710)
|.+++. +.+|++|.+++|++. .+-.++..|+.||.+++.+|++. .-+|..+..|..|.+||||+|++. ..|..+.
T Consensus 48 PeEL~~--lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE 123 (1255)
T KOG0444|consen 48 PEELSR--LQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLE 123 (1255)
T ss_pred hHHHHH--HhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhh
Confidence 334444 455666666666554 23334444455555555555442 224444455555555555555554 4455555
Q ss_pred CCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccccccccccccccccccc----------------
Q 005177 171 QLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQ---------------- 234 (710)
Q Consensus 171 ~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~---------------- 234 (710)
.-+++-+|+||+|++.....+-|-+|+.|-+|||++|++. .+|+.+..|..|+.|.|++|.+.
T Consensus 124 ~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vL 202 (1255)
T KOG0444|consen 124 YAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVL 202 (1255)
T ss_pred hhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhh
Confidence 5555555555555554222223344555555555555543 44444555555555555554332
Q ss_pred ---------ccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCC
Q 005177 235 ---------GNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRL 305 (710)
Q Consensus 235 ---------g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 305 (710)
..+|.++..+.+|..+|+|.|++. .+|+.+.++++|+.|+||+|.++. +....+...+|++|++|.|++
T Consensus 203 hms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~ite-L~~~~~~W~~lEtLNlSrNQL 280 (1255)
T KOG0444|consen 203 HMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITE-LNMTEGEWENLETLNLSRNQL 280 (1255)
T ss_pred hcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCceee-eeccHHHHhhhhhhccccchh
Confidence 235555555556666666666555 455555566666666666665552 223334445566666666666
Q ss_pred CCCCCccccCCCCCCEEEcccccCc-ccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCccc
Q 005177 306 SGPIPESFADLKNLRLLSLMYNEMS-GTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPD 384 (710)
Q Consensus 306 ~~~~p~~~~~l~~L~~L~Ls~N~l~-g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~ 384 (710)
+ .+|..+..+++|+.|++.+|+++ .-+|..++.+.+|+++..++|.+. .+|+.++.|.+|+.|.|++|.+- .+|..
T Consensus 281 t-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPea 357 (1255)
T KOG0444|consen 281 T-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEA 357 (1255)
T ss_pred c-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhh
Confidence 5 45666666666666666666554 235566666666666666666655 55666666666666666666655 45666
Q ss_pred ccCCCceeeEecccC
Q 005177 385 ICSGGVLFKLILFSN 399 (710)
Q Consensus 385 ~~~~~~L~~l~l~~N 399 (710)
+-.++.|..||+..|
T Consensus 358 IHlL~~l~vLDlreN 372 (1255)
T KOG0444|consen 358 IHLLPDLKVLDLREN 372 (1255)
T ss_pred hhhcCCcceeeccCC
Confidence 666666666666555
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-29 Score=292.60 Aligned_cols=138 Identities=19% Similarity=0.224 Sum_probs=124.8
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|.. .+|+.||||+++... .....+.+|+.++..++|||||++++++...+..|+||||++
T Consensus 8 i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~ 87 (669)
T cd05610 8 IVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLI 87 (669)
T ss_pred EEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCC
Confidence 678899999999999986 478999999997532 224668889999999999999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccc
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 590 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~ 590 (710)
+|+|.++++. .+++....+|+.||+.||+|||.. +|+||||||+|||++.++.+||+|||+++
T Consensus 88 g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 88 GGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 9999999864 467888899999999999999998 99999999999999999999999999876
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=255.42 Aligned_cols=245 Identities=18% Similarity=0.162 Sum_probs=182.5
Q ss_pred hhhhhcCCCCCccEEEE-cCCCcEEEEEEeeccch--------hHHHHHHHHHHHhccCCCCceeEEEEEE-cCCceeEE
Q 005177 450 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT--------RIKIVSEFITRIGTVRHKNLIRLLGFCY-NRHQAYLL 519 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~-~~~g~~vAvK~l~~~~~--------~~~~~~~e~~~l~~l~H~niv~l~g~~~-~~~~~~lv 519 (710)
..+++|+|||+.||||. +...+.||||.-..... -.+-..+|.++-+.+.||.||++++|+. +.+.+|-|
T Consensus 467 lLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTV 546 (775)
T KOG1151|consen 467 LLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTV 546 (775)
T ss_pred HHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceee
Confidence 67899999999999998 46788999998653211 1455778899999999999999999985 56789999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC---CCceEEcccCccccccc
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLAEFGFKYLTQL 594 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~---~~~~kl~DfGla~~~~~ 594 (710)
.|||+|.||+=+|+. .++..+...|+.||..||.||.+. .|+|||-||||.||||-. .|.+||.|||+++++..
T Consensus 547 LEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdd 625 (775)
T KOG1151|consen 547 LEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDD 625 (775)
T ss_pred eeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecchhhhccC
Confidence 999999999999976 457777889999999999999875 789999999999999963 47899999999998754
Q ss_pred cCC---------CCcccccccCchhhhh----ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccc
Q 005177 595 ADG---------SFPAKIAWTESGEFYN----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNE 661 (710)
Q Consensus 595 ~~~---------~~~~~~~~~~~~e~~~----~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 661 (710)
... +..+++.||-+||++. ..+.+.|+||||.|||+|..+.|+.||.....-+...... .++..
T Consensus 626 dSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeN---TIlkA 702 (775)
T KOG1151|consen 626 DSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQEN---TILKA 702 (775)
T ss_pred CccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhh---chhcc
Confidence 321 1123678899998754 2357889999999999999999999997443322211111 11111
Q ss_pred cccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 005177 662 NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEAL 699 (710)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl 699 (710)
.++..++ -+....+.-+++.+|++..-++|....++.
T Consensus 703 tEVqFP~-KPvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 703 TEVQFPP-KPVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred eeccCCC-CCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 1111011 111223455677788888877777766543
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=269.75 Aligned_cols=233 Identities=20% Similarity=0.151 Sum_probs=180.1
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
....+|.|+|+.|-++.. ++++..|||.+... .....+|+.++... .||||+++.+.|.++.+.|+|||++.+|-
T Consensus 326 ~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~---~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~e 402 (612)
T KOG0603|consen 326 FREELGEGSFSAVKYCESSPTDQEPAVKIISKR---ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGE 402 (612)
T ss_pred cccccCCCCccceeeeeccccccchhheecccc---ccccccccchhhhhcCCCcceeecceecCCceeeeeehhccccH
Confidence 445689999999988874 78899999999865 23345666555444 59999999999999999999999999998
Q ss_pred hhhhhhcCC-CHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe-cCCCceEEcccCccccccccCCCCcccccc
Q 005177 528 LSEKIRTKR-DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF-DENMEPHLAEFGFKYLTQLADGSFPAKIAW 605 (710)
Q Consensus 528 L~~~l~~~~-~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl-~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 605 (710)
+.+.+.... .-..+..|+.+++.|+.|||.+ +|+|||+||+|||+ ++.++++|+|||.++..... -..+.-+..
T Consensus 403 ll~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~-~~tp~~t~~ 478 (612)
T KOG0603|consen 403 LLRRIRSKPEFCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS-CDTPALTLQ 478 (612)
T ss_pred HHHHHHhcchhHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCchh-hcccchhhc
Confidence 888776533 2245667999999999999998 99999999999999 58999999999999876533 112222334
Q ss_pred cCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhcC
Q 005177 606 TESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCT 685 (710)
Q Consensus 606 ~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl 685 (710)
|.+||+.....++..+|+||+||+||||+||+.|+.....- .+...++..+ ..-...+..+.+++.+|+
T Consensus 479 y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-----~ei~~~i~~~------~~s~~vS~~AKdLl~~LL 547 (612)
T KOG0603|consen 479 YVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-----IEIHTRIQMP------KFSECVSDEAKDLLQQLL 547 (612)
T ss_pred ccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-----HHHHHhhcCC------ccccccCHHHHHHHHHhc
Confidence 77889988889999999999999999999999998743321 0111111111 111233456678999999
Q ss_pred CCCCCCCCCHHHHHH
Q 005177 686 RSTPSDRPSMEEALK 700 (710)
Q Consensus 686 ~~~p~~RPs~~evl~ 700 (710)
+.||.+||+|.++..
T Consensus 548 ~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 548 QVDPALRLGADEIGA 562 (612)
T ss_pred cCChhhCcChhhhcc
Confidence 999999999999864
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-29 Score=232.28 Aligned_cols=190 Identities=18% Similarity=0.167 Sum_probs=151.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc--chhHHHHHHHHHH-HhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG--ATRIKIVSEFITR-IGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~e~~~-l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
....+|+|++|.|-|..+ ++|+.+|||++... ....+....|+.+ ++....|.+|.++|.+..++..++.||.|.
T Consensus 50 ~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~- 128 (282)
T KOG0984|consen 50 GIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMD- 128 (282)
T ss_pred hhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhh-
Confidence 457899999999988875 89999999999864 2334555566665 456679999999999999999999999997
Q ss_pred CChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-C
Q 005177 526 GNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-S 598 (710)
Q Consensus 526 gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-~ 598 (710)
.||+.+-++ ..+....-+||..|.+||.|||++. .|||||+||+|||++.+|++|+||||++......-. +
T Consensus 129 tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt 206 (282)
T KOG0984|consen 129 TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKT 206 (282)
T ss_pred hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeehhhhHHH
Confidence 488776554 2345556699999999999999985 899999999999999999999999999876542211 1
Q ss_pred -CcccccccCchhhhh----ccCCccccceeeHHHHHHHHHhCCCCCCCC
Q 005177 599 -FPAKIAWTESGEFYN----AMKEEMYMDVYGFGEIILEILTNGRLTNAG 643 (710)
Q Consensus 599 -~~~~~~~~~~~e~~~----~~~~~~~~DVySfGvvl~Elltg~~p~~~~ 643 (710)
..+.-+ |++||... ...|+.|+||||+|+.+.||.+++.|++..
T Consensus 207 ~daGCkp-YmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 207 MDAGCKP-YMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred HhcCCCc-cCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence 122334 55666543 237899999999999999999999998743
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=248.88 Aligned_cols=234 Identities=21% Similarity=0.220 Sum_probs=182.2
Q ss_pred CCCccEEEEcC-CCcEEEEEEeeccchh--HHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChhhhhhc
Q 005177 458 QSAAGCKAVLP-TGITVSVKKIEWGATR--IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRT 534 (710)
Q Consensus 458 ~~g~vy~~~~~-~g~~vAvK~l~~~~~~--~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~~~l~~ 534 (710)
+||.||+|+.. +|..+|+|++...... .+.+.+|++.+++++|+||+++++++......++||||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999975 5899999999865332 57889999999999999999999999999999999999999999999875
Q ss_pred C--CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-CCcccccccCchhh
Q 005177 535 K--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SFPAKIAWTESGEF 611 (710)
Q Consensus 535 ~--~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-~~~~~~~~~~~~e~ 611 (710)
. .++.....++.++++|++|||+. +|+|+||+|+||++++++.++++|||.+........ ........+.+||.
T Consensus 81 ~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~ 157 (244)
T smart00220 81 RGRLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEV 157 (244)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHH
Confidence 3 68889999999999999999998 999999999999999999999999999876543211 11112333567787
Q ss_pred hhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCC
Q 005177 612 YNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSD 691 (710)
Q Consensus 612 ~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~ 691 (710)
......+.++||||||++++||++|+.|+........ ......... .............+.+++.+|+..+|++
T Consensus 158 ~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~ 231 (244)
T smart00220 158 LLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLE-----LFKKIGKPK-PPFPPPEWKISPEAKDLIRKLLVKDPEK 231 (244)
T ss_pred HccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-----HHHHHhccC-CCCccccccCCHHHHHHHHHHccCCchh
Confidence 7777788899999999999999999988864221111 000110111 0000100002346778999999999999
Q ss_pred CCCHHHHHH
Q 005177 692 RPSMEEALK 700 (710)
Q Consensus 692 RPs~~evl~ 700 (710)
||++.++++
T Consensus 232 Rp~~~~~~~ 240 (244)
T smart00220 232 RLTAEEALQ 240 (244)
T ss_pred ccCHHHHhh
Confidence 999999986
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.2e-29 Score=270.06 Aligned_cols=247 Identities=18% Similarity=0.202 Sum_probs=192.2
Q ss_pred hhcCCchhhhhhcCCCCCccEEEE-cCCCcEEEEEEeeccchhHHHHHHHHHHHhcc-CCCCceeEEEEEEc-----CCc
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYN-----RHQ 515 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~-----~~~ 515 (710)
...|. ..+.||.|.+|.|||++ ..+|+.+|||.........++.+.|.++++.. .|||++.++|++.. +++
T Consensus 18 ~d~~e--i~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~Dq 95 (953)
T KOG0587|consen 18 ADIFE--IIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQ 95 (953)
T ss_pred CCccE--EEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCe
Confidence 34466 67899999999999998 47899999999987776777788888888866 59999999999864 578
Q ss_pred eeEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 516 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
++||||||.+||.-|+++. .++|.....|+.++++|+.+||.. .++|||||-.|||++.++.+|+.|||++.-
T Consensus 96 LWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLvDFGvSaQ 172 (953)
T KOG0587|consen 96 LWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 172 (953)
T ss_pred EEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEeeeeeeee
Confidence 9999999999999999876 567888889999999999999999 999999999999999999999999999765
Q ss_pred ccccCCC--CcccccccCchhhhhcc-----CCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccccccc
Q 005177 592 TQLADGS--FPAKIAWTESGEFYNAM-----KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 664 (710)
Q Consensus 592 ~~~~~~~--~~~~~~~~~~~e~~~~~-----~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (710)
.....+. ...+++++++||+.... .++..+|+||+|++..||..|..|+.+-.... ..+.-..+|.
T Consensus 173 ldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr-----aLF~IpRNPP-- 245 (953)
T KOG0587|consen 173 LDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR-----ALFLIPRNPP-- 245 (953)
T ss_pred eecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh-----hhccCCCCCC--
Confidence 4332222 22244545556655432 36677999999999999999988875432211 1111111111
Q ss_pred CCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 665 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 665 ~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+....+....+++.+++..|+..|-++||++.+.+++
T Consensus 246 PkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 246 PKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred ccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 1122345667889999999999999999999988753
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=269.79 Aligned_cols=252 Identities=15% Similarity=0.158 Sum_probs=166.9
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-----------------CCCcEEEEEEeeccchh-HH--------------HHHHH
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-----------------PTGITVSVKKIEWGATR-IK--------------IVSEF 491 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-----------------~~g~~vAvK~l~~~~~~-~~--------------~~~~e 491 (710)
++|+ ..++||+|+||.||+|.. ..++.||||++...... .+ ....|
T Consensus 145 d~F~--i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 145 DDFQ--LRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cCce--EeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 3466 789999999999999963 34568999999753211 12 23346
Q ss_pred HHHHhccCCCCc-----eeEEEEEEc--------CCceeEEEeecCCCChhhhhhc------------------------
Q 005177 492 ITRIGTVRHKNL-----IRLLGFCYN--------RHQAYLLYDYLPNGNLSEKIRT------------------------ 534 (710)
Q Consensus 492 ~~~l~~l~H~ni-----v~l~g~~~~--------~~~~~lv~Ey~~~gsL~~~l~~------------------------ 534 (710)
+..+.+++|.++ +++++||.. ++..++||||+++|+|.++++.
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 667777777655 778888754 3568999999999999998863
Q ss_pred --CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC---CcccccccCch
Q 005177 535 --KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS---FPAKIAWTESG 609 (710)
Q Consensus 535 --~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~---~~~~~~~~~~~ 609 (710)
..+|.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ .....+.|.+|
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 124667788999999999999998 9999999999999999999999999998654321111 11112335555
Q ss_pred hhhhcc----------------------CCccccceeeHHHHHHHHHhCCC-CCCCCCCCCcc--ccccccc--cccccc
Q 005177 610 EFYNAM----------------------KEEMYMDVYGFGEIILEILTNGR-LTNAGSSLQNK--PIDGLLG--EMYNEN 662 (710)
Q Consensus 610 e~~~~~----------------------~~~~~~DVySfGvvl~Elltg~~-p~~~~~~~~~~--~~~~~~~--~~~~~~ 662 (710)
|..... ....+.||||+||+++||++|.. |+......... ....... +.....
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~ 459 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQ 459 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhccc
Confidence 543211 11234699999999999999875 44321110000 0000000 000000
Q ss_pred ccCCCcchHHHHHHHHHHHhhcCCCCC---CCCCCHHHHHHH
Q 005177 663 EVGSSSSLQDEIKLVLDVALLCTRSTP---SDRPSMEEALKL 701 (710)
Q Consensus 663 ~~~~~~~~~~~~~~~~~l~~~Cl~~~p---~~RPs~~evl~~ 701 (710)
.. ..+.+........+++.+++..+| .+|+|++|++++
T Consensus 460 ~~-~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 460 KY-DFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred CC-CcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 00 011122234566788888888765 789999999864
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.6e-31 Score=275.16 Aligned_cols=289 Identities=26% Similarity=0.389 Sum_probs=234.0
Q ss_pred EEcCCCCCc-ccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCCh-hhcCCCCCCEEECC
Q 005177 80 INLSMKGLS-GALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPG-GIQSLRNLLVLDAF 157 (710)
Q Consensus 80 l~l~~~~l~-g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~l~~L~~L~~L~L~ 157 (710)
+++..+++. ..+|+.+++ +..|+.||||+|++. ..|..+.+-+++-+|+||+|+|.. ||. .|-+|+.|-+||||
T Consensus 83 v~~R~N~LKnsGiP~diF~--l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Iet-IPn~lfinLtDLLfLDLS 158 (1255)
T KOG0444|consen 83 VIVRDNNLKNSGIPTDIFR--LKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIET-IPNSLFINLTDLLFLDLS 158 (1255)
T ss_pred HhhhccccccCCCCchhcc--cccceeeecchhhhh-hcchhhhhhcCcEEEEcccCcccc-CCchHHHhhHhHhhhccc
Confidence 344455553 346777777 777888888888776 677777777777788888887763 444 45677778888888
Q ss_pred CCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCC-CCCccccccccccccccccccccccc
Q 005177 158 SNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLN-DQIPAELGMLKTVTHMEIGYNFYQGN 236 (710)
Q Consensus 158 ~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~l~~l~~L~~L~l~~n~~~g~ 236 (710)
+|++. .+|+.+..|.+|+.|.|++|-+.-.--..+-.|++|++|.+++.+-+ ..+|.++..|.+|..+|++.|.+. .
T Consensus 159 ~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~ 236 (1255)
T KOG0444|consen 159 NNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-I 236 (1255)
T ss_pred cchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-c
Confidence 88776 56777777888888888877664322233445677777777765532 468999999999999999999987 6
Q ss_pred CCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCC-CCCccccC
Q 005177 237 IPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG-PIPESFAD 315 (710)
Q Consensus 237 ~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~ 315 (710)
+|..+-++.+|+.|+||+|+++ .+....+.+.+|++|+||.|+++ .+|..+..++.|+.|++.+|++.- -||..++.
T Consensus 237 vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGK 314 (1255)
T KOG0444|consen 237 VPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGK 314 (1255)
T ss_pred chHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhh
Confidence 8999999999999999999998 44445566789999999999998 689999999999999999999863 38999999
Q ss_pred CCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCC
Q 005177 316 LKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFN 378 (710)
Q Consensus 316 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~ 378 (710)
+.+|+.+..++|.+. .+|+.++.++.|+.|.|+.|++- .+|+.+.-++.|..||+..|.--
T Consensus 315 L~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnL 375 (1255)
T KOG0444|consen 315 LIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNL 375 (1255)
T ss_pred hhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCc
Confidence 999999999999987 78999999999999999999998 79999999999999999988643
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.6e-29 Score=232.07 Aligned_cols=246 Identities=14% Similarity=0.178 Sum_probs=182.5
Q ss_pred hhhhhcCCCCCccEEEE-cCCCcEEEEEEeeccchhHHHHHHHHHHHhccC-CCCceeEEEEEEcC--CceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGATRIKIVSEFITRIGTVR-HKNLIRLLGFCYNR--HQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~--~~~~lv~Ey~~~ 525 (710)
..+.+|+|.++.||.|. ..+.+.++||.++ ....+.+.+|+++|..++ |||||+|++...+. ....||+||+.+
T Consensus 42 ivrk~GRGKYSEVFeg~~~~~~eK~ViKiLK--PVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n 119 (338)
T KOG0668|consen 42 IVRKVGRGKYSEVFEGINITNNEKCVIKILK--PVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNN 119 (338)
T ss_pred HHHHHcCccHhhHhcccccCCCceEEEeeec--hHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhcc
Confidence 78899999999999997 4778899999998 445678899999999998 99999999998875 467899999999
Q ss_pred CChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC-CCceEEcccCccccccccCCCCc-ccc
Q 005177 526 GNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-NMEPHLAEFGFKYLTQLADGSFP-AKI 603 (710)
Q Consensus 526 gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~-~~~~kl~DfGla~~~~~~~~~~~-~~~ 603 (710)
.+....-. .+.......++.++.+||.|+|+. ||+|||+||.|+++|. .-..+++|.|+|.+......-.. ...
T Consensus 120 ~Dfk~ly~-tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVRVAS 195 (338)
T KOG0668|consen 120 TDFKQLYP-TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVAS 195 (338)
T ss_pred ccHHHHhh-hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhhcCCCceeeeeeeh
Confidence 88665443 466667778899999999999999 9999999999999995 56799999999988754322111 122
Q ss_pred cccCchhh-hhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc--ccc------------ccccccc------
Q 005177 604 AWTESGEF-YNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID--GLL------------GEMYNEN------ 662 (710)
Q Consensus 604 ~~~~~~e~-~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~--~~~------------~~~~~~~------ 662 (710)
.|.--||. .....++..-|+|||||++.+|+..+.||+.+.+..+.... ..+ .-..++.
T Consensus 196 RyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~ 275 (338)
T KOG0668|consen 196 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILG 275 (338)
T ss_pred hhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhh
Confidence 33333444 45566788899999999999999999999966554322111 000 0001111
Q ss_pred ------ccC-CCcchHH-HHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 663 ------EVG-SSSSLQD-EIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 663 ------~~~-~~~~~~~-~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+.. ..+.-.. ..+++++++.+.+..|-.+|||++|++.+
T Consensus 276 ~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 276 RHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred ccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 000 0000001 12578889999999999999999998753
|
|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.8e-29 Score=277.55 Aligned_cols=196 Identities=17% Similarity=0.108 Sum_probs=164.1
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc----chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~----~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
++|. ..++||+|+||.|..++. .+++++|+|++.+. ......|.+|-.+|.--..+=||+|+-.|+++...|+
T Consensus 75 ~Dfe--ilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYl 152 (1317)
T KOG0612|consen 75 EDFE--ILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYL 152 (1317)
T ss_pred HhhH--HHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEE
Confidence 3476 899999999999999986 77999999999862 3346789999999988889999999999999999999
Q ss_pred EEeecCCCChhhhhhcC--CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC
Q 005177 519 LYDYLPNGNLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~~--~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 596 (710)
|||||+||||-.++... ++..-...++..|.-||.-+|+. |+|||||||.|||||..|++|++|||-+-.+...+
T Consensus 153 VMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG 229 (1317)
T KOG0612|consen 153 VMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADG 229 (1317)
T ss_pred EEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchhHHhcCCCC
Confidence 99999999999999763 45555567788999999999999 99999999999999999999999999765443222
Q ss_pred ---CCCcccccccCchhhhhc-----cCCccccceeeHHHHHHHHHhCCCCCCCCC
Q 005177 597 ---GSFPAKIAWTESGEFYNA-----MKEEMYMDVYGFGEIILEILTNGRLTNAGS 644 (710)
Q Consensus 597 ---~~~~~~~~~~~~~e~~~~-----~~~~~~~DVySfGvvl~Elltg~~p~~~~~ 644 (710)
...+.+++-|-+||+... ..|+..+|.||+||++|||+.|..||+.+.
T Consensus 230 ~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads 285 (1317)
T KOG0612|consen 230 TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS 285 (1317)
T ss_pred cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHH
Confidence 122335666777887653 467888999999999999999999998543
|
|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-28 Score=240.96 Aligned_cols=235 Identities=13% Similarity=0.081 Sum_probs=180.2
Q ss_pred hhcCCchhhhhhcCCCCCccEEEE-cCCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCcee
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~-~~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 517 (710)
.++|+ -.+++|+|.||+|-.++ -.+|+.+|+|.+++.. .....-..|-++|...+||.+..|--.|+..+.+|
T Consensus 167 m~dFd--fLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlC 244 (516)
T KOG0690|consen 167 MEDFD--FLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLC 244 (516)
T ss_pred cchhh--HHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEE
Confidence 34577 77899999999999887 4789999999998742 22333456778899999999999988899999999
Q ss_pred EEEeecCCCChhhhhhcC--CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccc-
Q 005177 518 LLYDYLPNGNLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL- 594 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~~--~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~- 594 (710)
+||||..||.|+-+|.+. .+..+...+-..|..||.|||++ +||.||+|-+|.|||.||+.||+|||+++.--.
T Consensus 245 FVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~ 321 (516)
T KOG0690|consen 245 FVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKY 321 (516)
T ss_pred EEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhcccc
Confidence 999999999999998763 34555566788999999999999 999999999999999999999999999875321
Q ss_pred -cCCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc-ccccccccccccCCCcchHH
Q 005177 595 -ADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GLLGEMYNENEVGSSSSLQD 672 (710)
Q Consensus 595 -~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 672 (710)
.....-++++.|-+||+.....|+..+|.|..|||+|||+.|+.||....... ... ....++.-|+ .
T Consensus 322 g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~k--LFeLIl~ed~kFPr------~--- 390 (516)
T KOG0690|consen 322 GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEK--LFELILMEDLKFPR------T--- 390 (516)
T ss_pred cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhH--HHHHHHhhhccCCc------c---
Confidence 11122235566778899888899999999999999999999999998543211 111 0111221111 1
Q ss_pred HHHHHHHHHhhcCCCCCCCCC
Q 005177 673 EIKLVLDVALLCTRSTPSDRP 693 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RP 693 (710)
..++...+....+.+||.+|-
T Consensus 391 ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 391 LSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred CCHHHHHHHHHHhhcChHhhc
Confidence 123344566677889999995
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.8e-28 Score=273.57 Aligned_cols=249 Identities=15% Similarity=0.094 Sum_probs=155.1
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CC----CcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEE------EEc
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PT----GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGF------CYN 512 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~----g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~------~~~ 512 (710)
++|. ..+.||+|+||.||+|.. .+ +..||||++..... .+....| .+....+.+++.++.. +..
T Consensus 132 ~~y~--l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~ 206 (566)
T PLN03225 132 DDFV--LGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-VEIWMNE--RVRRACPNSCADFVYGFLEPVSSKK 206 (566)
T ss_pred CCeE--EeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-hHHHHHH--HHHhhchhhHHHHHHhhhccccccc
Confidence 3455 778999999999999986 44 78999999874321 1111111 1222223333332222 235
Q ss_pred CCceeEEEeecCCCChhhhhhcCC-C---------------------HHHHHHHHHHHHHHHHHHhcCCCCCceecCCCC
Q 005177 513 RHQAYLLYDYLPNGNLSEKIRTKR-D---------------------WAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKA 570 (710)
Q Consensus 513 ~~~~~lv~Ey~~~gsL~~~l~~~~-~---------------------~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~ 570 (710)
+++.++||||+++|+|.+++.... . ......|+.|+++||+|||+. +|+||||||
T Consensus 207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLKP 283 (566)
T PLN03225 207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVKP 283 (566)
T ss_pred CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCCH
Confidence 668999999999999999886421 0 122347899999999999998 999999999
Q ss_pred CCeEecC-CCceEEcccCccccccccCCCC---cccccccCchhhhhc----------------------cCCcccccee
Q 005177 571 SNIVFDE-NMEPHLAEFGFKYLTQLADGSF---PAKIAWTESGEFYNA----------------------MKEEMYMDVY 624 (710)
Q Consensus 571 ~NiLl~~-~~~~kl~DfGla~~~~~~~~~~---~~~~~~~~~~e~~~~----------------------~~~~~~~DVy 624 (710)
+|||++. ++.+||+|||+++......... ....+.|++||.+.. ..++.++|||
T Consensus 284 ~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVw 363 (566)
T PLN03225 284 QNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIY 363 (566)
T ss_pred HHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccH
Confidence 9999996 5899999999997543221111 112233556663321 1234567999
Q ss_pred eHHHHHHHHHhCCCCCCCCCCC-----C--cccccccccccccccccCC----CcchHHHHHHHHHHHhhcCCCCCCCCC
Q 005177 625 GFGEIILEILTNGRLTNAGSSL-----Q--NKPIDGLLGEMYNENEVGS----SSSLQDEIKLVLDVALLCTRSTPSDRP 693 (710)
Q Consensus 625 SfGvvl~Elltg~~p~~~~~~~-----~--~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~Cl~~~p~~RP 693 (710)
||||++|||+++..+.+..... . ......+ .....+..... ............+++.+|++.||++||
T Consensus 364 SlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ 442 (566)
T PLN03225 364 SAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAW-RKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRI 442 (566)
T ss_pred HHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHH-HHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCC
Confidence 9999999999976654321000 0 0000000 00001100000 000000112345899999999999999
Q ss_pred CHHHHHHH
Q 005177 694 SMEEALKL 701 (710)
Q Consensus 694 s~~evl~~ 701 (710)
|++|++++
T Consensus 443 ta~e~L~H 450 (566)
T PLN03225 443 SAKAALAH 450 (566)
T ss_pred CHHHHhCC
Confidence 99999875
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-30 Score=257.36 Aligned_cols=312 Identities=30% Similarity=0.463 Sum_probs=195.4
Q ss_pred EEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEEC
Q 005177 77 VVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDA 156 (710)
Q Consensus 77 v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L 156 (710)
.+.++++.+.+. .+|+++++ +.+++.|+.++|+++ .+|.+++++.+|+.|+.++|.+. .+|+.++.+..|+.||.
T Consensus 70 l~vl~~~~n~l~-~lp~aig~--l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~ 144 (565)
T KOG0472|consen 70 LTVLNVHDNKLS-QLPAAIGE--LEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDA 144 (565)
T ss_pred eeEEEeccchhh-hCCHHHHH--HHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhhc
Confidence 455666666665 56777777 777888888888876 67778888888888888888776 45666777777777777
Q ss_pred CCCCCCcCCchhccCCCCCCEEEccCCCCCC----------------------CCCcccCCCCCCCeEEecCCcCCCCCc
Q 005177 157 FSNSFSGSVPAEISQLEHLKVLNLAGSYFSG----------------------PIPSQFGSFKSLEFLHLAGNLLNDQIP 214 (710)
Q Consensus 157 ~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~----------------------~~p~~~~~l~~L~~L~L~~N~l~~~~p 214 (710)
.+|+++ ..|+.++++.+|..|++.+|++.. .+|+.++.|.+|+.|+|..|.+. .+|
T Consensus 145 ~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~tlP~~lg~l~~L~~LyL~~Nki~-~lP 222 (565)
T KOG0472|consen 145 TNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLETLPPELGGLESLELLYLRRNKIR-FLP 222 (565)
T ss_pred cccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHHHHHHHhcccchhhhhcCChhhcchhhhHHHHhhhcccc-cCC
Confidence 777766 455555555555555555555442 33444444444444444444432 222
Q ss_pred ccccccccccccccccccccccCCcccc-CCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCC
Q 005177 215 AELGMLKTVTHMEIGYNFYQGNIPWQLG-NMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVT 293 (710)
Q Consensus 215 ~~l~~l~~L~~L~l~~n~~~g~~p~~l~-~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 293 (710)
+|+.+..|..|+++.|++. .+|...+ +++++.+||+..|+++ ..|+.+..+.+|++||+|+|.+++ +|.+++++
T Consensus 223 -ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~-Lp~sLgnl- 297 (565)
T KOG0472|consen 223 -EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISS-LPYSLGNL- 297 (565)
T ss_pred -CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCcccc-CCcccccc-
Confidence 2333333333333333222 1222222 4555555555555555 455555555555555555555543 33333333
Q ss_pred CCCEEE--------------------------------------------------------------------------
Q 005177 294 TLKSLD-------------------------------------------------------------------------- 299 (710)
Q Consensus 294 ~L~~L~-------------------------------------------------------------------------- 299 (710)
.|+.|-
T Consensus 298 hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~V 377 (565)
T KOG0472|consen 298 HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLV 377 (565)
T ss_pred eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccC
Confidence 333333
Q ss_pred -----------------ccCCCCC-----------------------CCCCccccCCCCCCEEEcccccCcccCCcccCC
Q 005177 300 -----------------LSDNRLS-----------------------GPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (710)
Q Consensus 300 -----------------Ls~N~l~-----------------------~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 339 (710)
++.|++. +-+|..++.+++|+.|+|++|-+. .+|..++.
T Consensus 378 PdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~ 456 (565)
T KOG0472|consen 378 PDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGS 456 (565)
T ss_pred CHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhh
Confidence 3333322 122333455678888899888776 68888888
Q ss_pred CCCCcEEeccCCCCC----------------------CCCCc-ccCCCCCCcEEECCCCcCCccCcccccCCCceeeEec
Q 005177 340 LPSLEILFIWNNYFS----------------------GSLPE-NLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLIL 396 (710)
Q Consensus 340 l~~L~~L~L~~N~l~----------------------g~~p~-~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l 396 (710)
+..|+.|+++.|+|. +.+|. .+.++.+|..||+.+|.+. .||+.++++.+|++|.+
T Consensus 457 lv~Lq~LnlS~NrFr~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL 535 (565)
T KOG0472|consen 457 LVRLQTLNLSFNRFRMLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLEL 535 (565)
T ss_pred hhhhheecccccccccchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEe
Confidence 888999999888875 23333 3778899999999999997 79999999999999999
Q ss_pred ccCCcc
Q 005177 397 FSNNFT 402 (710)
Q Consensus 397 ~~N~l~ 402 (710)
++|.|.
T Consensus 536 ~gNpfr 541 (565)
T KOG0472|consen 536 DGNPFR 541 (565)
T ss_pred cCCccC
Confidence 999998
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-28 Score=241.16 Aligned_cols=247 Identities=21% Similarity=0.203 Sum_probs=185.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcC------CceeEE
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR------HQAYLL 519 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~------~~~~lv 519 (710)
....++.|.- .|..+.. -.+++||+|++... ....+...+|...+..+.|+|||+++.++... .+.|+|
T Consensus 21 nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v 99 (369)
T KOG0665|consen 21 NLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLV 99 (369)
T ss_pred eecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHH
Confidence 4455666655 5555542 46889999998753 22356788899999999999999999999753 368999
Q ss_pred EeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC
Q 005177 520 YDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 599 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 599 (710)
||||. ++|.+.++..++..+...|.+|++.|++|||+. +|+||||||+||++..+..+||.|||+|+..+..-...
T Consensus 100 ~e~m~-~nl~~vi~~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~mt 175 (369)
T KOG0665|consen 100 MELMD-ANLCQVILMELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMMT 175 (369)
T ss_pred HHhhh-hHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhhcccCcccccC
Confidence 99997 599999998899999999999999999999999 99999999999999999999999999998654321111
Q ss_pred cc-cccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccc-------------------cccc-
Q 005177 600 PA-KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGL-------------------LGEM- 658 (710)
Q Consensus 600 ~~-~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~-------------------~~~~- 658 (710)
+. ...+|.+||+.-+..+.+.+||||.||++.||++|+..|.+...+..|..... ..+.
T Consensus 176 pyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~ 255 (369)
T KOG0665|consen 176 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENR 255 (369)
T ss_pred chhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcC
Confidence 11 45678889988877899999999999999999999988876554444432100 0000
Q ss_pred -----------c-cccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 659 -----------Y-NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 659 -----------~-~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+ |..+.......+-......+++.+++..+|++|-++++++++
T Consensus 256 ~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 256 PQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred hHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 0 000000000011223456789999999999999999999864
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.3e-29 Score=248.40 Aligned_cols=233 Identities=17% Similarity=0.151 Sum_probs=178.4
Q ss_pred CCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEE
Q 005177 446 FNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 446 ~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv 519 (710)
|+ -..++|+|+||.|..|.- .+.+.+|||.++++.. ..+--+.|-++|.-- +-|.+|+++.++++-+.+|.|
T Consensus 351 Fn--Fl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 351 FN--FLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cc--eEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 55 678999999999999975 4567899999987522 222234455555533 578999999999999999999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccc--ccc
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT--QLA 595 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~--~~~ 595 (710)
|||+.+|+|--++.+ ....+....+|.+||-||-|||++ +||.||||-.|||||.+|++||+|||+++.- ...
T Consensus 429 MEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~ 505 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGV 505 (683)
T ss_pred EEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeecccccccccCCc
Confidence 999999999998887 345667788999999999999999 9999999999999999999999999998743 222
Q ss_pred CCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHH
Q 005177 596 DGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 675 (710)
Q Consensus 596 ~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (710)
.+..-.+++-|.+||++.+++|+..+|.|||||+||||+.|+.||+++...+ .+..+.+.. ...+ .....
T Consensus 506 TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~e------lF~aI~ehn-vsyP---KslSk 575 (683)
T KOG0696|consen 506 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE------LFQAIMEHN-VSYP---KSLSK 575 (683)
T ss_pred ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHH------HHHHHHHcc-CcCc---ccccH
Confidence 2222235666788899999999999999999999999999999998654321 222333332 2222 22334
Q ss_pred HHHHHHhhcCCCCCCCCC
Q 005177 676 LVLDVALLCTRSTPSDRP 693 (710)
Q Consensus 676 ~~~~l~~~Cl~~~p~~RP 693 (710)
+.+++...-+...|.+|-
T Consensus 576 EAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 576 EAVAICKGLLTKHPGKRL 593 (683)
T ss_pred HHHHHHHHHhhcCCcccc
Confidence 556666667778888884
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.5e-28 Score=242.74 Aligned_cols=252 Identities=15% Similarity=0.149 Sum_probs=188.8
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCC--C----CceeEEEEEEcCCc
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRH--K----NLIRLLGFCYNRHQ 515 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H--~----niv~l~g~~~~~~~ 515 (710)
.+.|. ....+|+|.||.|.++.. ..+..||||.++.-..-.+...-|++++.++.+ | -+|++.+|+...+.
T Consensus 88 ~~Ry~--i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh 165 (415)
T KOG0671|consen 88 TNRYE--IVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH 165 (415)
T ss_pred cccee--hhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence 45566 889999999999999975 458999999998655555666778999999843 2 37889999999999
Q ss_pred eeEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC--------------
Q 005177 516 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-------------- 577 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~-------------- 577 (710)
.+||+|.+ |-|++++++. ..+......++.|++++++|||+. +++|-||||+|||+-+
T Consensus 166 iCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~~~~ 241 (415)
T KOG0671|consen 166 ICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPKKKVC 241 (415)
T ss_pred eEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccCCccc
Confidence 99999987 4599999986 345677889999999999999999 9999999999999832
Q ss_pred ------CCceEEcccCccccccccCCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc
Q 005177 578 ------NMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI 651 (710)
Q Consensus 578 ------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~ 651 (710)
...+||.|||-|....... +....+..|.+||++.+...+.++||||+||||.|+.||...|....+.+..++
T Consensus 242 ~~r~~ks~~I~vIDFGsAtf~~e~h-s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaM 320 (415)
T KOG0671|consen 242 FIRPLKSTAIKVIDFGSATFDHEHH-STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAM 320 (415)
T ss_pred eeccCCCcceEEEecCCcceeccCc-ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHH
Confidence 2357899999887654332 222345568899999999999999999999999999999988774333221111
Q ss_pred cc-ccc-------------cc-----cc-------c--cccCCCc--------chHHHHHHHHHHHhhcCCCCCCCCCCH
Q 005177 652 DG-LLG-------------EM-----YN-------E--NEVGSSS--------SLQDEIKLVLDVALLCTRSTPSDRPSM 695 (710)
Q Consensus 652 ~~-~~~-------------~~-----~~-------~--~~~~~~~--------~~~~~~~~~~~l~~~Cl~~~p~~RPs~ 695 (710)
.+ .++ +. +| . .....+. ....+..++++++.+++..||.+|+|+
T Consensus 321 MerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl 400 (415)
T KOG0671|consen 321 MERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITL 400 (415)
T ss_pred HHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccH
Confidence 10 000 00 00 0 0000000 112345578999999999999999999
Q ss_pred HHHHHH
Q 005177 696 EEALKL 701 (710)
Q Consensus 696 ~evl~~ 701 (710)
.|++++
T Consensus 401 ~EAL~H 406 (415)
T KOG0671|consen 401 REALSH 406 (415)
T ss_pred HHHhcC
Confidence 999864
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-26 Score=225.01 Aligned_cols=205 Identities=24% Similarity=0.326 Sum_probs=173.8
Q ss_pred hcCCCCCccEEEEcC-CCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChhh
Q 005177 454 AARPQSAAGCKAVLP-TGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSE 530 (710)
Q Consensus 454 ig~g~~g~vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~~ 530 (710)
||+|.+|.||++... +|..+++|.+..... ..+.+.+|++.+++++|++|+++++++...+..++||||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 589999999999974 489999999986544 25778999999999999999999999999999999999999999999
Q ss_pred hhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC-CCceEEcccCccccccccC--CCCccccc
Q 005177 531 KIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-NMEPHLAEFGFKYLTQLAD--GSFPAKIA 604 (710)
Q Consensus 531 ~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~-~~~~kl~DfGla~~~~~~~--~~~~~~~~ 604 (710)
++.. ..++..+..++.+++++++|||+. +++|+||+|.||+++. ++.++++|||.+....... ........
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~ 157 (215)
T cd00180 81 LLKENEGKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTP 157 (215)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCC
Confidence 9976 378999999999999999999998 9999999999999999 8999999999987654321 11111222
Q ss_pred ccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhh
Q 005177 605 WTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 683 (710)
Q Consensus 605 ~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 683 (710)
.+.+||..... ..+.+.|+|++|++++|| ..+.+++..
T Consensus 158 ~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-----------------------------------------~~~~~~l~~ 196 (215)
T cd00180 158 AYMAPEVLLGKGYYSEKSDIWSLGVILYEL-----------------------------------------PELKDLIRK 196 (215)
T ss_pred CccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------------HHHHHHHHH
Confidence 35566766555 677889999999999998 356688889
Q ss_pred cCCCCCCCCCCHHHHHHHH
Q 005177 684 CTRSTPSDRPSMEEALKLL 702 (710)
Q Consensus 684 Cl~~~p~~RPs~~evl~~L 702 (710)
|++.+|++||++.++++.+
T Consensus 197 ~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 197 MLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HhhCCcccCcCHHHHhhCC
Confidence 9999999999999998653
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-28 Score=233.91 Aligned_cols=249 Identities=20% Similarity=0.236 Sum_probs=183.6
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcC-----CceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR-----HQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-----~~~~lv~ 520 (710)
...-||-|+||.|+.+.. .+|+.||.|++..- -...+.+.+|+++|...+|.|+...++..... +++|.++
T Consensus 57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~T 136 (449)
T KOG0664|consen 57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLT 136 (449)
T ss_pred CCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHH
Confidence 567899999999999986 67999999999753 23466778899999999999999999887654 3688999
Q ss_pred eecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC
Q 005177 521 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 598 (710)
Q Consensus 521 Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 598 (710)
|.|.. ||...+-. .++-....-..+||.+||.|||+. +|.||||||.|.|++++...||||||+||..+.....
T Consensus 137 ELmQS-DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~ 212 (449)
T KOG0664|consen 137 ELMQS-DLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRL 212 (449)
T ss_pred HHHHh-hhhheeccCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccchhhhh
Confidence 99974 88887754 445555667789999999999999 9999999999999999999999999999986543322
Q ss_pred Ccc---cccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc-----------------cccccc
Q 005177 599 FPA---KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-----------------DGLLGE 657 (710)
Q Consensus 599 ~~~---~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~-----------------~~~~~~ 657 (710)
..+ .+.||.+||+..+ ..|+..+||||.|||+.|++-++..|......+.... ++....
T Consensus 213 hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H 292 (449)
T KOG0664|consen 213 NMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNH 292 (449)
T ss_pred hhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHH
Confidence 222 4568889988765 4689999999999999999987776664443322110 000011
Q ss_pred cccccccCC-C------cchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 005177 658 MYNENEVGS-S------SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLL 702 (710)
Q Consensus 658 ~~~~~~~~~-~------~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L 702 (710)
+........ . ......-.+.+++..+.+..||++|.+.++++..+
T Consensus 293 ~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 293 VLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred hhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 111110000 0 01111123456677788899999999999987654
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-27 Score=258.89 Aligned_cols=235 Identities=20% Similarity=0.250 Sum_probs=173.7
Q ss_pred hhhhhcCCCCCc-cEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAA-GCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~-vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
..+++|.|..|+ ||+|.. .|+.||||++-.+ ....+.+||..|..- +|||||++++.-.+++..||+.|.|. -+
T Consensus 513 ~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e--~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~-~s 588 (903)
T KOG1027|consen 513 PKEILGYGSNGTVVFRGVY-EGREVAVKRLLEE--FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA-CS 588 (903)
T ss_pred cHHHcccCCCCcEEEEEee-CCceehHHHHhhH--hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh-hh
Confidence 678889998765 699987 7789999999743 245677899998765 59999999998888999999999997 59
Q ss_pred hhhhhhcC-CCH-----HHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC---C--CceEEcccCccccccccC
Q 005177 528 LSEKIRTK-RDW-----AAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---N--MEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 528 L~~~l~~~-~~~-----~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~---~--~~~kl~DfGla~~~~~~~ 596 (710)
|.+++... .+. .....+..|++.||++||+. +||||||||.||||+. + ..++|+|||+++......
T Consensus 589 L~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~ 665 (903)
T KOG1027|consen 589 LQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK 665 (903)
T ss_pred HHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccccCCCc
Confidence 99999763 111 23467889999999999997 9999999999999986 3 479999999998765433
Q ss_pred CCC-----cccccccCchhhhhccCCccccceeeHHHHHHHHHhC-CCCCCCCCCCCcccccccccccccccccCCCcch
Q 005177 597 GSF-----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTN-GRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 670 (710)
Q Consensus 597 ~~~-----~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (710)
.+. ..++..+.+||.....+.+.++|++|+|||+|..+|| ++||.+....+. . .+....+-..+. + .
T Consensus 666 sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~-N---Il~~~~~L~~L~--~-~ 738 (903)
T KOG1027|consen 666 SSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA-N---ILTGNYTLVHLE--P-L 738 (903)
T ss_pred chhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh-h---hhcCccceeeec--c-C
Confidence 221 1233345567888877778899999999999999998 566643221110 0 000000000011 1 1
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 671 QDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 671 ~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
.+. ...+++.++++.+|..||++.+|+.
T Consensus 739 ~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 739 PDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred chH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 111 6678999999999999999999984
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-26 Score=229.97 Aligned_cols=244 Identities=17% Similarity=0.199 Sum_probs=181.3
Q ss_pred hhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcC-CceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNR-HQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-~~~~lv~ 520 (710)
...++-+|.||.||+|.+ .+.+.|-||.++.... +...+..|-..+..+.|||+.+..|++.++ +..+.+|
T Consensus 288 l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y 367 (563)
T KOG1024|consen 288 LSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLY 367 (563)
T ss_pred chhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEE
Confidence 556788999999999965 3345677887775433 456677888888888999999999999764 5678899
Q ss_pred eecCCCChhhhhhc----------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccc
Q 005177 521 DYLPNGNLSEKIRT----------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 590 (710)
Q Consensus 521 Ey~~~gsL~~~l~~----------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~ 590 (710)
.|+.-|+|..+|.. ...--+...++.|++.|++|||.+ +|||.||.++|.+||+..++|++|-.++|
T Consensus 368 ~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~LqVkltDsaLSR 444 (563)
T KOG1024|consen 368 PATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQLQVKLTDSALSR 444 (563)
T ss_pred eccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---CcccchhhhhcceehhheeEEeccchhcc
Confidence 99999999999972 122334567899999999999999 99999999999999999999999999988
Q ss_pred cccccCCCC-----cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccccccccc
Q 005177 591 LTQLADGSF-----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEV 664 (710)
Q Consensus 591 ~~~~~~~~~-----~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (710)
-.-..+-.. -..+.|++ .|-.....++..+|||||||++|||+| |+.|+.+-... +...-+.|...+
T Consensus 445 DLFP~DYhcLGDnEnRPvkWMs-lEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPf------Em~~ylkdGyRl 517 (563)
T KOG1024|consen 445 DLFPGDYHCLGDNENRPVKWMS-LEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPF------EMEHYLKDGYRL 517 (563)
T ss_pred ccCcccccccCCCCCCcccccC-HHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHH------HHHHHHhcccee
Confidence 643222111 12455554 466666788999999999999999988 55665422211 111112222222
Q ss_pred CCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 665 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 665 ~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
..+- +...++..++..||+.+|++||+++|++.-|.+.+
T Consensus 518 aQP~---NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~ 556 (563)
T KOG1024|consen 518 AQPF---NCPDELFTVMACCWALLPEERPSFSQLVICLSEFH 556 (563)
T ss_pred cCCC---CCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 2122 22346778889999999999999999999887653
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.4e-27 Score=243.75 Aligned_cols=234 Identities=17% Similarity=0.148 Sum_probs=181.1
Q ss_pred hhhhhcCCCCCccEEEEcCCCc-EEEEEEeecc----chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGI-TVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~-~vAvK~l~~~----~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
...-+|-|+||.|-.+...... ..|+|.+++. ..+.+....|-.+|.+.+.|.||++|.-|.+...+|+.||-|-
T Consensus 424 ~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaCl 503 (732)
T KOG0614|consen 424 RIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACL 503 (732)
T ss_pred hhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhc
Confidence 4566899999999888764433 5899988763 3345567778899999999999999999999999999999999
Q ss_pred CCChhhhhhcCC--CHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC-cc
Q 005177 525 NGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF-PA 601 (710)
Q Consensus 525 ~gsL~~~l~~~~--~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~-~~ 601 (710)
||.+...++... +..+...++..+.+|++|||++ +||.|||||+|.+||.+|.+|+.|||+|+......... -+
T Consensus 504 GGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwTFc 580 (732)
T KOG0614|consen 504 GGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWTFC 580 (732)
T ss_pred CchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhccCCceeeec
Confidence 999999998744 5556678888999999999999 99999999999999999999999999999876433222 22
Q ss_pred cccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHH
Q 005177 602 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 681 (710)
Q Consensus 602 ~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 681 (710)
+++.|-+||+......+..+|.||+|+++|||+||++||.+...+..... +-.-+|.... +........+++
T Consensus 581 GTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~---ILkGid~i~~-----Pr~I~k~a~~Li 652 (732)
T KOG0614|consen 581 GTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNL---ILKGIDKIEF-----PRRITKTATDLI 652 (732)
T ss_pred CCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHH---HHhhhhhhhc-----ccccchhHHHHH
Confidence 55667788888888889999999999999999999999986544322111 0111111101 112234556777
Q ss_pred hhcCCCCCCCCCC
Q 005177 682 LLCTRSTPSDRPS 694 (710)
Q Consensus 682 ~~Cl~~~p~~RPs 694 (710)
.+.+..+|.+|--
T Consensus 653 k~LCr~~P~ERLG 665 (732)
T KOG0614|consen 653 KKLCRDNPTERLG 665 (732)
T ss_pred HHHHhcCcHhhhc
Confidence 7777889999865
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.1e-26 Score=237.25 Aligned_cols=194 Identities=15% Similarity=0.159 Sum_probs=156.6
Q ss_pred hhhhhcCCCCCccEEEE-cCCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~-~~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+-||-|+||.|+.+. ..+...+|.|.+++... +..-.+.|..+|.....+=||+|+--|.+++.+|+||||++
T Consensus 633 kik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIP 712 (1034)
T KOG0608|consen 633 KIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIP 712 (1034)
T ss_pred EEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccC
Confidence 56779999999999986 56678899999986432 34456788999999999999999999999999999999999
Q ss_pred CCChhhhhhcCC--CHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccc---------c
Q 005177 525 NGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT---------Q 593 (710)
Q Consensus 525 ~gsL~~~l~~~~--~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~---------~ 593 (710)
|||+-.+|.+.. .......++.++..|+++.|.. ++|||||||.|||||.||++|+.|||++.-+ +
T Consensus 713 GGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq 789 (1034)
T KOG0608|consen 713 GGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ 789 (1034)
T ss_pred CccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccceecccccccc
Confidence 999999887633 3344456777899999999999 9999999999999999999999999996421 1
Q ss_pred ccCCC-----------------------------------CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCC
Q 005177 594 LADGS-----------------------------------FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGR 638 (710)
Q Consensus 594 ~~~~~-----------------------------------~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~ 638 (710)
..... ...++..|.+||++....++..+|.||.|||||||+.|+.
T Consensus 790 ~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~ 869 (1034)
T KOG0608|consen 790 EGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQP 869 (1034)
T ss_pred CCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCC
Confidence 00000 0012334566788777788888999999999999999999
Q ss_pred CCCCCCCC
Q 005177 639 LTNAGSSL 646 (710)
Q Consensus 639 p~~~~~~~ 646 (710)
||.+....
T Consensus 870 pf~~~tp~ 877 (1034)
T KOG0608|consen 870 PFLADTPG 877 (1034)
T ss_pred CccCCCCC
Confidence 99865443
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=5e-26 Score=222.91 Aligned_cols=242 Identities=16% Similarity=0.135 Sum_probs=179.3
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCcee
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 517 (710)
.+|+ ...+||+|+|.+|..+.+ .+.+.+|+|.+++.-. ...-...|-.+..+. +||.+|.|..+|+++...+
T Consensus 250 ~df~--ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf 327 (593)
T KOG0695|consen 250 QDFD--LLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF 327 (593)
T ss_pred ccce--eeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence 3466 788999999999999886 6788999999986422 223344444444433 6999999999999999999
Q ss_pred EEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccc-
Q 005177 518 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL- 594 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~- 594 (710)
+|.||+++|+|-=++.+ +++......+..+|.-||.|||++ +||.||+|-.|||+|.+|+.|++|+|+++.--.
T Consensus 328 fvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~l~~ 404 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGP 404 (593)
T ss_pred EEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcCCCC
Confidence 99999999999777655 566667778888999999999999 999999999999999999999999999875321
Q ss_pred -cCCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCC-CCCCCCcccccccccccccccccCCCcchHH
Q 005177 595 -ADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTN-AGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 672 (710)
Q Consensus 595 -~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (710)
..++.-.+++.|.+||+..+..|+..+|.|++||+++||+.|+.||+ -++...+...+..+-+++-+..+..+..
T Consensus 405 gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprs--- 481 (593)
T KOG0695|consen 405 GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRS--- 481 (593)
T ss_pred CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccce---
Confidence 22222335666888999999999999999999999999999999998 2222222222222222222211221111
Q ss_pred HHHHHHHHHhhcCCCCCCCCC
Q 005177 673 EIKLVLDVALLCTRSTPSDRP 693 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RP 693 (710)
...+.-.+...-+.+||++|-
T Consensus 482 lsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 482 LSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred eehhhHHHHHHhhcCCcHHhc
Confidence 123344566677889999885
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.2e-28 Score=243.98 Aligned_cols=260 Identities=30% Similarity=0.441 Sum_probs=182.4
Q ss_pred EEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECC
Q 005177 78 VGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAF 157 (710)
Q Consensus 78 ~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~ 157 (710)
..+.++.+.+. .+.+.+.+ +..|++|++++|+++ ..|++++.+..++.|+.|+|+++ .+|+.++++.+|+.|+.+
T Consensus 48 ~~lils~N~l~-~l~~dl~n--L~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s 122 (565)
T KOG0472|consen 48 QKLILSHNDLE-VLREDLKN--LACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCS 122 (565)
T ss_pred hhhhhccCchh-hccHhhhc--ccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcc
Confidence 34556666654 23344555 788999999999997 78999999999999999999998 789999999999999999
Q ss_pred CCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccC
Q 005177 158 SNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNI 237 (710)
Q Consensus 158 ~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~ 237 (710)
+|.+. .+|++++.+..|..|+..+|+++ ..|+.++++.+|..|++.+|.+....|..+ +++.|+++|...|.+. .+
T Consensus 123 ~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i-~m~~L~~ld~~~N~L~-tl 198 (565)
T KOG0472|consen 123 SNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHI-AMKRLKHLDCNSNLLE-TL 198 (565)
T ss_pred cccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHH-HHHHHHhcccchhhhh-cC
Confidence 99998 78899999999999999999998 678889999999999999998875444444 4888888887777654 67
Q ss_pred CccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCcccc-CCCCCCEEEccCCCCCCCCCccccCC
Q 005177 238 PWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFS-RVTTLKSLDLSDNRLSGPIPESFADL 316 (710)
Q Consensus 238 p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l 316 (710)
|..++.+.+|..|++..|++. .+| +|..+..|.+|+++.|++. .+|.+.. +++++..|||..|++. +.|+.+.-+
T Consensus 199 P~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clL 274 (565)
T KOG0472|consen 199 PPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLL 274 (565)
T ss_pred ChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHh
Confidence 777888888888888777776 344 4555555555555444443 2333322 4444444555555444 344444444
Q ss_pred CCCCEEEcccccCcccCCcccCCCCCCcEEeccCCC
Q 005177 317 KNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNY 352 (710)
Q Consensus 317 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~ 352 (710)
.+|+.||+|+|.++ .+|.+++++ .|+.|.+.+|.
T Consensus 275 rsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNP 308 (565)
T KOG0472|consen 275 RSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNP 308 (565)
T ss_pred hhhhhhcccCCccc-cCCcccccc-eeeehhhcCCc
Confidence 44455555544444 234444444 44444444444
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.8e-26 Score=216.67 Aligned_cols=251 Identities=14% Similarity=0.107 Sum_probs=177.1
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhcc-CCCCceeEEEE-EEcCCceeE
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGF-CYNRHQAYL 518 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~-~~~~~~~~l 518 (710)
+.+.|+ ..+.+|+|.||.+-.+.+ ++.+.+|+|.+.......++|.+|..-==.+ -|.|||.-+++ |++.+.+.+
T Consensus 22 l~d~y~--I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF 99 (378)
T KOG1345|consen 22 LEDVYT--INKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVF 99 (378)
T ss_pred hhhhhh--HHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEE
Confidence 334566 889999999999999986 6788999999998777788898886542222 49999987765 666788899
Q ss_pred EEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec--CCCceEEcccCcccccccc
Q 005177 519 LYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD--ENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~--~~~~~kl~DfGla~~~~~~ 595 (710)
++||+|.|||..-+.. ........+++.|++.|+.|||+. .+||||||.+|||+- +...+|+||||..+..+..
T Consensus 100 ~qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~t 176 (378)
T KOG1345|consen 100 VQEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTT 176 (378)
T ss_pred eeccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccccccCce
Confidence 9999999999988865 456777789999999999999999 999999999999995 3457999999987655432
Q ss_pred CCCCcccccccCchhhhh-----ccCCccccceeeHHHHHHHHHhCCCCCCCCCCC--CcccccccccccccccccCCCc
Q 005177 596 DGSFPAKIAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSL--QNKPIDGLLGEMYNENEVGSSS 668 (710)
Q Consensus 596 ~~~~~~~~~~~~~~e~~~-----~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 668 (710)
......... |.+||... ........|||.||+|++..+||+.|+..+... ..|....+..... ...+.
T Consensus 177 V~~~~~~~~-y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~----~~~P~ 251 (378)
T KOG1345|consen 177 VKYLEYVNN-YHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKN----PALPK 251 (378)
T ss_pred ehhhhhhcc-cCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccC----ccCch
Confidence 221112233 33443322 123455689999999999999999999832211 1121212211111 11122
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 005177 669 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLL 702 (710)
Q Consensus 669 ~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L 702 (710)
.+....+.++.+-.+-+.++|++|-...++-++.
T Consensus 252 ~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~r 285 (378)
T KOG1345|consen 252 KFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMR 285 (378)
T ss_pred hhcccCHHHHHHHHHhcCCcccccchhHHHHHHH
Confidence 2222344556666677889999997666665543
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-24 Score=216.26 Aligned_cols=190 Identities=19% Similarity=0.207 Sum_probs=161.1
Q ss_pred hhhhhcCCCCCccEEEEcCC-CcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVLPT-GITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~-g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.+|+|++|.||++.... +..+|+|.+..... ..+.+.+|++.+.+++|+|++++++++...+..++++||++++
T Consensus 3 ~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 82 (225)
T smart00221 3 LGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGG 82 (225)
T ss_pred eeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCC
Confidence 45678999999999999754 89999999986543 4678889999999999999999999999999999999999999
Q ss_pred Chhhhhhc--C-CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC--C-CCc
Q 005177 527 NLSEKIRT--K-RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--G-SFP 600 (710)
Q Consensus 527 sL~~~l~~--~-~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~--~-~~~ 600 (710)
+|.+++.. . .++.....++.++++++.|||.. +++|+|++|+||+++.++.++++|||.+....... . ...
T Consensus 83 ~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 159 (225)
T smart00221 83 DLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTV 159 (225)
T ss_pred CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccce
Confidence 99999865 3 78889999999999999999998 99999999999999999999999999987654321 0 111
Q ss_pred ccccccCchhhh-hccCCccccceeeHHHHHHHHHhCCCCCCC
Q 005177 601 AKIAWTESGEFY-NAMKEEMYMDVYGFGEIILEILTNGRLTNA 642 (710)
Q Consensus 601 ~~~~~~~~~e~~-~~~~~~~~~DVySfGvvl~Elltg~~p~~~ 642 (710)
.....+.+||.. .....+.++||||||++++||++|+.||..
T Consensus 160 ~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 160 KGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred eccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 122335667766 555677799999999999999999999864
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.7e-25 Score=229.28 Aligned_cols=247 Identities=16% Similarity=0.173 Sum_probs=188.9
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccC------CCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR------HKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~------H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
...-.|+|-|++|.+|.. ..|..||||.|.......+.=..|+++|+++. --|+++|+..|...+++|||+|-
T Consensus 436 V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~ 515 (752)
T KOG0670|consen 436 VQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEP 515 (752)
T ss_pred EEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehh
Confidence 445569999999999985 56889999999987766777778999999985 34889999999999999999997
Q ss_pred cCCCChhhhhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC-CceEEcccCccccccccC
Q 005177 523 LPNGNLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-MEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 523 ~~~gsL~~~l~~-----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~-~~~kl~DfGla~~~~~~~ 596 (710)
+. -+|.++|+. .+....+..++.|+.-||..|... +|+|.||||.|||+++. ...||||||-|.......
T Consensus 516 Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~ene 591 (752)
T KOG0670|consen 516 LS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILKLCDFGSASFASENE 591 (752)
T ss_pred hh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceeeeccCcccccccccc
Confidence 75 589999976 456677788999999999999987 99999999999999964 678999999887654332
Q ss_pred CCCcc-cccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc-------------cccc--cccccccc
Q 005177 597 GSFPA-KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN-------------KPID--GLLGEMYN 660 (710)
Q Consensus 597 ~~~~~-~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~-------------~~~~--~~~~~~~~ 660 (710)
..+. ...+|.+||++.+.+|+...|+||.||.|||+.||+..|++..+.+- .+.. ....+.+|
T Consensus 592 -itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD 670 (752)
T KOG0670|consen 592 -ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFD 670 (752)
T ss_pred -ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcc
Confidence 1222 34568899999999999999999999999999999998885432210 0000 00001111
Q ss_pred cc------------------------c--------c---CCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 661 EN------------------------E--------V---GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 661 ~~------------------------~--------~---~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.. + . ..+......+..+.+|+.+|+..||++|.|..+++.+
T Consensus 671 ~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 671 QDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKH 746 (752)
T ss_pred cccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcC
Confidence 00 0 0 0112223456678899999999999999999998764
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.4e-24 Score=220.44 Aligned_cols=124 Identities=21% Similarity=0.258 Sum_probs=108.6
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccC-----C---CCceeEEEEEEc----CCce
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR-----H---KNLIRLLGFCYN----RHQA 516 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~-----H---~niv~l~g~~~~----~~~~ 516 (710)
....+|.|.|++|+.+.. ...+.||+|+.+....-.+....||++|++++ | ..||+|+++|.. +.++
T Consensus 82 v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HV 161 (590)
T KOG1290|consen 82 VQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHV 161 (590)
T ss_pred EEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEE
Confidence 667899999999999985 67789999999977766777889999999885 3 479999999976 3489
Q ss_pred eEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec
Q 005177 517 YLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD 576 (710)
Q Consensus 517 ~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~ 576 (710)
+||+||+ |-+|..+|.. .++...+.+|+.||+.||.|||..| +|||-||||+|||+.
T Consensus 162 CMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 162 CMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLC 222 (590)
T ss_pred EEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeee
Confidence 9999998 5588888864 6788899999999999999999998 999999999999994
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.5e-25 Score=235.09 Aligned_cols=242 Identities=16% Similarity=0.198 Sum_probs=182.9
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
....+|.|.||.|||++. .+|+..|||.++.... ..+...+|+-+++..+|||||.++|-|..++..+++||||.+|+
T Consensus 19 llqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggs 98 (829)
T KOG0576|consen 19 LLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGS 98 (829)
T ss_pred heeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCc
Confidence 667899999999999985 7899999999998644 35667788999999999999999999999999999999999999
Q ss_pred hhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc---CCCCccc
Q 005177 528 LSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA---DGSFPAK 602 (710)
Q Consensus 528 L~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~---~~~~~~~ 602 (710)
|++.-+. .++..+...++....+|+.|||+. +=+|||||-.|||+.+.+.+|++|||.+--.... ..++. +
T Consensus 99 lQdiy~~TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqitati~Krksfi-G 174 (829)
T KOG0576|consen 99 LQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKSFI-G 174 (829)
T ss_pred ccceeeecccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhhhhhhhhccc-C
Confidence 9998776 455666778889999999999998 7799999999999999999999999986433211 11223 4
Q ss_pred ccccCchhhh---hccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHH
Q 005177 603 IAWTESGEFY---NAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 679 (710)
Q Consensus 603 ~~~~~~~e~~---~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (710)
++|+.+||+. ....|..++|||+.|+...|+---+.|.++-...+.... ....-+++..+.....+ ...+-+
T Consensus 175 tpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~L--mTkS~~qpp~lkDk~kw---s~~fh~ 249 (829)
T KOG0576|consen 175 TPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFL--MTKSGFQPPTLKDKTKW---SEFFHN 249 (829)
T ss_pred CccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHH--hhccCCCCCcccCCccc---hHHHHH
Confidence 4555566654 245688899999999999999777777654332221111 11122233322222233 334557
Q ss_pred HHhhcCCCCCCCCCCHHHHHH
Q 005177 680 VALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 680 l~~~Cl~~~p~~RPs~~evl~ 700 (710)
++..|+-.+|++||+++..+.
T Consensus 250 fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 250 FVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred HHHHHhcCCCccCCChhhhee
Confidence 777899999999999876543
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-24 Score=224.66 Aligned_cols=191 Identities=20% Similarity=0.180 Sum_probs=155.5
Q ss_pred chhhhhhcCCCCCccEEEEcC-CCcEEEEEEeeccchh---------HHHHHHHHHHHhccC---CCCceeEEEEEEcCC
Q 005177 448 STECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATR---------IKIVSEFITRIGTVR---HKNLIRLLGFCYNRH 514 (710)
Q Consensus 448 ~~~~~~ig~g~~g~vy~~~~~-~g~~vAvK~l~~~~~~---------~~~~~~e~~~l~~l~---H~niv~l~g~~~~~~ 514 (710)
|.....+|+|+||.|..++.. ....|+||.+.+.+.- .--...||++|.+++ |+||++++++|++++
T Consensus 563 yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd 642 (772)
T KOG1152|consen 563 YTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDD 642 (772)
T ss_pred ceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCC
Confidence 347889999999999999974 4668999999865321 112456899999998 999999999999999
Q ss_pred ceeEEEeec-CCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 515 QAYLLYDYL-PNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 515 ~~~lv~Ey~-~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
.+||+||-- ++-||++++.. .++......|..||+-|+++||+. +|||||||-+||.+|.+|.+|++|||-|..
T Consensus 643 ~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klidfgsaa~ 719 (772)
T KOG1152|consen 643 YYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLIDFGSAAY 719 (772)
T ss_pred eeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEeeccchhh
Confidence 999999964 45599999965 567888899999999999999999 999999999999999999999999998765
Q ss_pred ccccCCCCcccccccCchhhhhccCCc-cccceeeHHHHHHHHHhCCCCCC
Q 005177 592 TQLADGSFPAKIAWTESGEFYNAMKEE-MYMDVYGFGEIILEILTNGRLTN 641 (710)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~DVySfGvvl~Elltg~~p~~ 641 (710)
.....-..-.++..|++||+..+.+|. ..-|||++|++||.++...-|+.
T Consensus 720 ~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 720 TKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred hcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 432211111244458889998887764 44799999999999988777764
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-24 Score=257.17 Aligned_cols=191 Identities=17% Similarity=0.201 Sum_probs=136.2
Q ss_pred hccCC-CCceeEEEEE-------EcCCceeEEEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCce
Q 005177 496 GTVRH-KNLIRLLGFC-------YNRHQAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIP 564 (710)
Q Consensus 496 ~~l~H-~niv~l~g~~-------~~~~~~~lv~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~ii 564 (710)
+.++| +||++++++| .+.+..+.+|||++ ++|.++|.. .+++.+...|+.||++||+|||+. +|+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---gIv 102 (793)
T PLN00181 27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECED-VSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQ---GIV 102 (793)
T ss_pred chhhHHHHHHHhhcccCCccccccccchhhhhhccCC-ccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence 34566 6888899987 23346788899884 699999964 368888999999999999999998 999
Q ss_pred ecCCCCCCeEecC-------------------CCceEEcccCccccccccC------------CC------CcccccccC
Q 005177 565 HGDLKASNIVFDE-------------------NMEPHLAEFGFKYLTQLAD------------GS------FPAKIAWTE 607 (710)
Q Consensus 565 HrDlk~~NiLl~~-------------------~~~~kl~DfGla~~~~~~~------------~~------~~~~~~~~~ 607 (710)
||||||+|||++. ++.+|++|||+++...... .. ...++.+|+
T Consensus 103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 182 (793)
T PLN00181 103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYT 182 (793)
T ss_pred eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceE
Confidence 9999999999953 4567778888776421100 00 011345688
Q ss_pred chhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhcCCC
Q 005177 608 SGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRS 687 (710)
Q Consensus 608 ~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~ 687 (710)
+||+.....++.++|||||||++|||++|..|+...... .......... +..........+++.+|++.
T Consensus 183 APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~----~~~~~~~~~~-------~~~~~~~~~~~~~~~~~L~~ 251 (793)
T PLN00181 183 SPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRT----MSSLRHRVLP-------PQILLNWPKEASFCLWLLHP 251 (793)
T ss_pred ChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHH----HHHHHHhhcC-------hhhhhcCHHHHHHHHHhCCC
Confidence 899888888999999999999999999987765421110 0000011111 11111233456788899999
Q ss_pred CCCCCCCHHHHHHH
Q 005177 688 TPSDRPSMEEALKL 701 (710)
Q Consensus 688 ~p~~RPs~~evl~~ 701 (710)
+|.+||+|.|++++
T Consensus 252 ~P~~Rps~~eil~h 265 (793)
T PLN00181 252 EPSCRPSMSELLQS 265 (793)
T ss_pred ChhhCcChHHHhhc
Confidence 99999999999864
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.4e-22 Score=241.37 Aligned_cols=284 Identities=18% Similarity=0.229 Sum_probs=155.3
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEc
Q 005177 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L 180 (710)
++|+.|++.+|.+. .+|..| .+.+|+.|+|++|++. .+|..+..+++|+.|+|+++...+.+|. ++.+++|+.|+|
T Consensus 589 ~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L 664 (1153)
T PLN03210 589 PKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKL 664 (1153)
T ss_pred cccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEe
Confidence 35667777666664 556554 4566777777766665 4555666667777777766654445553 666667777777
Q ss_pred cCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCcc
Q 005177 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS 260 (710)
Q Consensus 181 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~ 260 (710)
++|.....+|..++++++|+.|++++|...+.+|..+ ++++|+.|++++|...+.+|.. .++|+.|++++|.+. .
T Consensus 665 ~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~ 739 (1153)
T PLN03210 665 SDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-E 739 (1153)
T ss_pred cCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-c
Confidence 6666555666666666777777776665555566554 5666666666666544444432 234556666666654 3
Q ss_pred CchhccCCC-------------------------------CCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCC
Q 005177 261 IPKELSNLT-------------------------------KLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPI 309 (710)
Q Consensus 261 ~p~~l~~l~-------------------------------~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 309 (710)
+|..+ .++ +|+.|++++|...+.+|..++++++|+.|++++|...+.+
T Consensus 740 lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~L 818 (1153)
T PLN03210 740 FPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETL 818 (1153)
T ss_pred ccccc-cccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCee
Confidence 44332 234 4455555555444445555555555555555554433344
Q ss_pred CccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCC
Q 005177 310 PESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGG 389 (710)
Q Consensus 310 p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~ 389 (710)
|..+ ++++|+.|++++|.....+|.. .++|+.|+|++|.++ .+|.++..+++|+.|++++|+--..+|..+..++
T Consensus 819 P~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~ 893 (1153)
T PLN03210 819 PTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLK 893 (1153)
T ss_pred CCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCccccccc
Confidence 4433 4455555555554433333322 234555555555554 3455555555555555554322223454444555
Q ss_pred ceeeEecccC
Q 005177 390 VLFKLILFSN 399 (710)
Q Consensus 390 ~L~~l~l~~N 399 (710)
.|+.++++++
T Consensus 894 ~L~~L~l~~C 903 (1153)
T PLN03210 894 HLETVDFSDC 903 (1153)
T ss_pred CCCeeecCCC
Confidence 5555554443
|
syringae 6; Provisional |
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.7e-23 Score=211.51 Aligned_cols=195 Identities=17% Similarity=0.201 Sum_probs=155.6
Q ss_pred hhhhhcCCchhhhhhcCCCCCccEEEEcC----CCcEEEEEEeeccchhHHHHHHHHHHHhccC-CCCceeEEEEEEcCC
Q 005177 440 NDVLRSFNSTECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGATRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRH 514 (710)
Q Consensus 440 ~~~~~~~~~~~~~~ig~g~~g~vy~~~~~----~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~ 514 (710)
..+.+.|. ..+.||+|.|++||++... ....||+|.+..... ......|++.|..+. |.||+++.+++..++
T Consensus 32 p~~~~~~~--~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~-p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 32 PFISNAYK--VVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS-PSRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhh--hhccccccchhhhhhhhHhhhccccceEeeeecccccC-chHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 34455677 8899999999999999863 567999999986543 345778899998886 999999999999999
Q ss_pred ceeEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC-CCceEEcccCcccccc
Q 005177 515 QAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-NMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 515 ~~~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~-~~~~kl~DfGla~~~~ 593 (710)
...+|+||++.-+..++.. .++......+...+.+||+|+|+. +||||||||+|+|.+. .+...|.|||+|.-.+
T Consensus 109 ~v~ivlp~~~H~~f~~l~~-~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d 184 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYR-SLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYD 184 (418)
T ss_pred eeEEEecccCccCHHHHHh-cCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEechhHHHHH
Confidence 9999999999988777776 467888889999999999999999 9999999999999995 5778999999986210
Q ss_pred c-------c----------CCC-----------------------------CcccccccCchhhhh-ccCCccccceeeH
Q 005177 594 L-------A----------DGS-----------------------------FPAKIAWTESGEFYN-AMKEEMYMDVYGF 626 (710)
Q Consensus 594 ~-------~----------~~~-----------------------------~~~~~~~~~~~e~~~-~~~~~~~~DVySf 626 (710)
. . .+. ...+++.+.+||+.. ...-++++||||.
T Consensus 185 ~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~ 264 (418)
T KOG1167|consen 185 GYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSA 264 (418)
T ss_pred hhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeec
Confidence 0 0 000 001122234456543 4556888999999
Q ss_pred HHHHHHHHhCCCCCC
Q 005177 627 GEIILEILTNGRLTN 641 (710)
Q Consensus 627 Gvvl~Elltg~~p~~ 641 (710)
|||++-+++++.||+
T Consensus 265 GVI~Lslls~~~PFf 279 (418)
T KOG1167|consen 265 GVILLSLLSRRYPFF 279 (418)
T ss_pred cceeehhhccccccc
Confidence 999999999999988
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.7e-22 Score=229.52 Aligned_cols=264 Identities=22% Similarity=0.252 Sum_probs=162.7
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEcc
Q 005177 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (710)
Q Consensus 102 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~ 181 (710)
.-..|||++|.++ .+|..+. ++|+.|++++|+++. +|. .+++|++|+|++|+++ .+|.. .++|+.|+|+
T Consensus 202 ~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls 270 (788)
T PRK15387 202 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPVL---PPGLLELSIF 270 (788)
T ss_pred CCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccC-cccCc---ccccceeecc
Confidence 4556677777766 4666554 366777777777663 443 2466777777777766 34532 3466667777
Q ss_pred CCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccC
Q 005177 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261 (710)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~ 261 (710)
+|.++ .+|.. .++|+.|++++|+++ .+|.. +++|+.|++++|.+.+ +|.. ..+|+.|++++|++++ +
T Consensus 271 ~N~L~-~Lp~l---p~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~~-L 337 (788)
T PRK15387 271 SNPLT-HLPAL---PSGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS-L 337 (788)
T ss_pred CCchh-hhhhc---hhhcCEEECcCCccc-ccccc---ccccceeECCCCcccc-CCCC---cccccccccccCcccc-c
Confidence 77666 34432 245666777777665 34432 3556677777776664 3332 1346666777777763 4
Q ss_pred chhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCC
Q 005177 262 PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLP 341 (710)
Q Consensus 262 p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 341 (710)
|.. ..+|+.|+|++|++++ +|.. ..+|+.|++++|+++. +|.. ..+|+.|++++|++++ +|.. .+
T Consensus 338 P~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s 402 (788)
T PRK15387 338 PTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LPVL---PS 402 (788)
T ss_pred ccc---ccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCcccC-CCCc---cc
Confidence 431 2467777777777764 4432 2456677777777764 5543 2457777777777774 4543 25
Q ss_pred CCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecccCCcccchhHHH
Q 005177 342 SLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIVMFIA 409 (710)
Q Consensus 342 ~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~l~g~i~~~~ 409 (710)
+|+.|++++|++++ +|... .+|+.|++++|+++ .+|..++.+..|..+++++|+++|.+|-.+
T Consensus 403 ~L~~LdLS~N~Lss-IP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 403 ELKELMVSGNRLTS-LPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred CCCEEEccCCcCCC-CCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 67777777777763 56432 35667777777776 677777777777777777777777665433
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.9e-22 Score=229.08 Aligned_cols=328 Identities=21% Similarity=0.299 Sum_probs=226.5
Q ss_pred HHHHHHHHHHhcc--CCChhhHHHHHHHHhhCCCCCCCCCC----CCCCCCCCCCCCCCCceeee---------------
Q 005177 9 LNLFIWLVFVPAV--SANDPYSEALLSLKSELVDDFNSLHD----WFVPPGVNPAGKIYACSWSG--------------- 67 (710)
Q Consensus 9 ~~~~~~~~~~~~~--~~~~~~~~all~~k~~~~~~~~~l~~----w~~~~~~~~~~~~~~C~w~g--------------- 67 (710)
.=++=|+.-++|- .+.+++.+.+++..+.+.-| +.+.+ |.. .++.|--..
T Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p-~~~~~~~~~~~~--------~~~fc~~~~~~~~~l~~~~~~~~~ 114 (754)
T PRK15370 44 VEAQNCIAYLCHPPETASPEEIKSKFECLRMLAFP-AYADNIQYSRGG--------ADQYCILSENSQEILSIVFNTEGY 114 (754)
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhcCC-chhhccccccCC--------CCcccccCCcchhhheeeecCCce
Confidence 4556677777555 56778999999999999776 34555 763 445553222
Q ss_pred -eeeCCCCCcEEEEEcCCCCCcccC--------------------Cc--c------h---hhhcCCCCcEEECCCCcCcc
Q 005177 68 -VKCNKNNTIVVGINLSMKGLSGAL--------------------PG--K------P---LRIFFNELVDLNLSHNSFSG 115 (710)
Q Consensus 68 -v~C~~~~~~v~~l~l~~~~l~g~~--------------------~~--~------~---~~~~l~~L~~L~Ls~N~l~~ 115 (710)
|.|.. +.|+.+...+....... ++ . . ..-...+.+.|+|+++.++
T Consensus 115 tv~~~~--~~vt~l~~~g~~~~~~~~~~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lt- 191 (754)
T PRK15370 115 TVEGGG--KSVTYTRVTESEQASSASGSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLT- 191 (754)
T ss_pred EEecCC--CcccccccccccccccCCCCCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcC-
Confidence 56654 34444443322111000 00 0 0 0001245788999999988
Q ss_pred cCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCC
Q 005177 116 QFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGS 195 (710)
Q Consensus 116 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~ 195 (710)
.+|..+. ++|+.|+|++|+++ .+|..+. ++|++|++++|+++ .+|..+. .+|+.|+|++|+++ .+|..+.
T Consensus 192 sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~- 261 (754)
T PRK15370 192 TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP- 261 (754)
T ss_pred cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh-
Confidence 5676553 57999999999998 4666554 58999999999998 5676654 47999999999998 6777664
Q ss_pred CCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEE
Q 005177 196 FKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLF 275 (710)
Q Consensus 196 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~ 275 (710)
++|+.|++++|+++ .+|..+. .+|+.|++++|.+++ +|..+. ++|+.|++++|+++. +|..+ .++|+.|+
T Consensus 262 -s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~-LP~~l--~~sL~~L~ 331 (754)
T PRK15370 262 -SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA-LPETL--PPGLKTLE 331 (754)
T ss_pred -CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc-CCccc--cccceecc
Confidence 58999999999988 5777664 478889999988874 554443 468888888888884 45443 25788888
Q ss_pred ccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCC
Q 005177 276 LFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSG 355 (710)
Q Consensus 276 L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g 355 (710)
+++|.+++ +|..+. ++|+.|++++|+++ .+|..+. ++|+.|+|++|+++ .+|..+. ++|+.|++++|+++
T Consensus 332 Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~- 401 (754)
T PRK15370 332 AGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV- 401 (754)
T ss_pred ccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc-
Confidence 88888875 565543 67888888888887 4665553 57888888888887 4565543 36888888888887
Q ss_pred CCCccc----CCCCCCcEEECCCCcCC
Q 005177 356 SLPENL----GRNSKLRWVDVSTNNFN 378 (710)
Q Consensus 356 ~~p~~l----~~~~~L~~L~ls~N~l~ 378 (710)
.+|..+ ..++++..+++.+|.++
T Consensus 402 ~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 402 RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 455443 33467778888888776
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.4e-22 Score=228.26 Aligned_cols=262 Identities=25% Similarity=0.334 Sum_probs=211.2
Q ss_pred EEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECC
Q 005177 78 VGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAF 157 (710)
Q Consensus 78 ~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~ 157 (710)
..++++.++++ .+|+.+. ++|+.|+|++|+++ .+|. .+++|++|+|++|+|+. +|.. .++|+.|+++
T Consensus 204 ~~LdLs~~~Lt-sLP~~l~----~~L~~L~L~~N~Lt-~LP~---lp~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls 270 (788)
T PRK15387 204 AVLNVGESGLT-TLPDCLP----AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPVL---PPGLLELSIF 270 (788)
T ss_pred cEEEcCCCCCC-cCCcchh----cCCCEEEccCCcCC-CCCC---CCCCCcEEEecCCccCc-ccCc---ccccceeecc
Confidence 34688888887 6777663 47999999999998 4674 36899999999999995 5643 4789999999
Q ss_pred CCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccC
Q 005177 158 SNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNI 237 (710)
Q Consensus 158 ~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~ 237 (710)
+|.++ .+|..+ .+|+.|+|++|+++ .+|.. +++|+.|++++|++++ +|.. ..+|+.|++++|.+++ +
T Consensus 271 ~N~L~-~Lp~lp---~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~~-L 337 (788)
T PRK15387 271 SNPLT-HLPALP---SGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS-L 337 (788)
T ss_pred CCchh-hhhhch---hhcCEEECcCCccc-ccccc---ccccceeECCCCcccc-CCCC---cccccccccccCcccc-c
Confidence 99998 456533 57889999999998 46653 5789999999999985 5543 2457788999999874 5
Q ss_pred CccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCC
Q 005177 238 PWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLK 317 (710)
Q Consensus 238 p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 317 (710)
|.. ..+|++|++++|++++ +|.. ..+|+.|++++|+++. +|.. ..+|+.|++++|++++ +|.. .+
T Consensus 338 P~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s 402 (788)
T PRK15387 338 PTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LPVL---PS 402 (788)
T ss_pred ccc---ccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCcccC-CCCc---cc
Confidence 642 2579999999999995 5543 3578889999999985 6643 3579999999999985 6643 36
Q ss_pred CCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccc
Q 005177 318 NLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDI 385 (710)
Q Consensus 318 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~ 385 (710)
+|+.|++++|++++ +|.. ..+|+.|++++|+++ .+|..+.++++|+.|++++|.|+|.+|..+
T Consensus 403 ~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 403 ELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred CCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 79999999999985 6754 357889999999998 789999999999999999999999988766
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.88 E-value=8e-22 Score=240.57 Aligned_cols=290 Identities=20% Similarity=0.219 Sum_probs=235.7
Q ss_pred CCCCcEEECCCCc------CcccCCccccCCC-CCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCC
Q 005177 100 FNELVDLNLSHNS------FSGQFPVEIFNLT-SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQL 172 (710)
Q Consensus 100 l~~L~~L~Ls~N~------l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L 172 (710)
+++|+.|.+.++. +...+|..|..++ +|+.|++.+|.+. .+|..| ...+|+.|++++|.+. .+|..+..+
T Consensus 557 m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l 633 (1153)
T PLN03210 557 MRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSL 633 (1153)
T ss_pred CccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccC
Confidence 8899999997653 3446787787764 6999999999886 678777 5799999999999987 678889999
Q ss_pred CCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhcc
Q 005177 173 EHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDI 252 (710)
Q Consensus 173 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~l 252 (710)
++|++|+|+++...+.+|. ++.+++|+.|+|++|.....+|..++.+++|+.|++++|...+.+|..+ ++++|+.|++
T Consensus 634 ~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~L 711 (1153)
T PLN03210 634 TGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNL 711 (1153)
T ss_pred CCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeC
Confidence 9999999999876667875 8899999999999998888999999999999999999987777888766 7899999999
Q ss_pred ccccCCccCchhccCCCCCcEEEccccccCCCCCccc------------------------------cCCCCCCEEEccC
Q 005177 253 AGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEF------------------------------SRVTTLKSLDLSD 302 (710)
Q Consensus 253 s~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~------------------------------~~l~~L~~L~Ls~ 302 (710)
++|...+.+|.. .++|+.|++++|.+. .+|..+ ...++|+.|++++
T Consensus 712 sgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~ 787 (1153)
T PLN03210 712 SGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSD 787 (1153)
T ss_pred CCCCCccccccc---cCCcCeeecCCCccc-cccccccccccccccccccchhhccccccccchhhhhccccchheeCCC
Confidence 999877677753 467899999999876 344322 1124677888888
Q ss_pred CCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCc
Q 005177 303 NRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIP 382 (710)
Q Consensus 303 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip 382 (710)
|...+.+|.+++++++|+.|++++|...+.+|..+ .+++|+.|++++|.....+|.. ..+|+.|++++|.++ .+|
T Consensus 788 n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP 862 (1153)
T PLN03210 788 IPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVP 862 (1153)
T ss_pred CCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cCh
Confidence 87777788888888888888888876666777765 6888888888887665566643 357888899998887 688
Q ss_pred ccccCCCceeeEeccc-CCccc
Q 005177 383 PDICSGGVLFKLILFS-NNFTG 403 (710)
Q Consensus 383 ~~~~~~~~L~~l~l~~-N~l~g 403 (710)
.++..+++|+.|++++ |++++
T Consensus 863 ~si~~l~~L~~L~L~~C~~L~~ 884 (1153)
T PLN03210 863 WWIEKFSNLSFLDMNGCNNLQR 884 (1153)
T ss_pred HHHhcCCCCCEEECCCCCCcCc
Confidence 8888888999999887 55554
|
syringae 6; Provisional |
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.6e-22 Score=194.71 Aligned_cols=165 Identities=19% Similarity=0.181 Sum_probs=120.7
Q ss_pred CChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCccc
Q 005177 526 GNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK 602 (710)
Q Consensus 526 gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~ 602 (710)
|+|.++++. .++|.++..|+.|+++||+|||+. + ||+||+++.++.+|+ ||+++....... .+
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~~---~g 66 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQS---RV 66 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeeccccC---CC
Confidence 789999964 479999999999999999999998 4 999999999999999 999876543221 23
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHH--HHHHH
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK--LVLDV 680 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l 680 (710)
...|.+||+..+..++.++|||||||++|||+||+.|+......... .......+.... ............ .+.++
T Consensus 67 ~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 144 (176)
T smart00750 67 DPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAI-LEILLNGMPADD-PRDRSNLESVSAARSFADF 144 (176)
T ss_pred cccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHH-HHHHHHHhccCC-ccccccHHHHHhhhhHHHH
Confidence 35577889888888999999999999999999999998643322110 001111111110 000111122222 58899
Q ss_pred HhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 681 ALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 681 ~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
+.+|++.+|++||++.|+++++..+.
T Consensus 145 i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 145 MRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred HHHHHhcccccccCHHHHHHHHHHHH
Confidence 99999999999999999999886543
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.6e-24 Score=236.51 Aligned_cols=312 Identities=27% Similarity=0.337 Sum_probs=197.6
Q ss_pred EEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEEC
Q 005177 77 VVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDA 156 (710)
Q Consensus 77 v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L 156 (710)
...+|++.+.++ .+|-.+.. +.+|+.|+++.|.+. ..|.+..++.+|++|+|..|.+. ..|.++..+++|++||+
T Consensus 47 L~~l~lsnn~~~-~fp~~it~--l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~Ldl 121 (1081)
T KOG0618|consen 47 LKSLDLSNNQIS-SFPIQITL--LSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDL 121 (1081)
T ss_pred eEEeeccccccc-cCCchhhh--HHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhccccccc
Confidence 667777776654 44444444 667778888887775 56677777777778877777765 57777777777777777
Q ss_pred CCCCCCcCCchhccCCCC----------------------------------------CC-EEEccCCCCCCCCCccc--
Q 005177 157 FSNSFSGSVPAEISQLEH----------------------------------------LK-VLNLAGSYFSGPIPSQF-- 193 (710)
Q Consensus 157 ~~N~l~~~~p~~~~~L~~----------------------------------------L~-~L~L~~n~l~~~~p~~~-- 193 (710)
++|++. .+|.-+..++. |+ .|+|.+|.++...-..+
T Consensus 122 S~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~~ldLr~N~~~~~dls~~~~ 200 (1081)
T KOG0618|consen 122 SFNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTHQLDLRYNEMEVLDLSNLAN 200 (1081)
T ss_pred chhccC-CCchhHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhheeeecccchhhhhhhhhccc
Confidence 777765 34432221111 11 24444444331000000
Q ss_pred -------------------------------------CCCCCCCeEEecCCcCCCCCccccccccccccccccccccccc
Q 005177 194 -------------------------------------GSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGN 236 (710)
Q Consensus 194 -------------------------------------~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~ 236 (710)
..-.+|++++++.|+++ .+|++++.+.+|+.++..+|++. .
T Consensus 201 l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~~p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~ 278 (1081)
T KOG0618|consen 201 LEVLHCERNQLSELEISGPSLTALYADHNPLTTLDVHPVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-A 278 (1081)
T ss_pred hhhhhhhhcccceEEecCcchheeeeccCcceeeccccccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-h
Confidence 00124555555555554 35566667777777777777663 4
Q ss_pred CCccccCCCccchhccccccCCccCchhccCCCCCcEEEcccccc-----------------------------------
Q 005177 237 IPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQL----------------------------------- 281 (710)
Q Consensus 237 ~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l----------------------------------- 281 (710)
+|..+..+++|+.|++..|.+. .+|.....++.|++|+|..|++
T Consensus 279 lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~ 357 (1081)
T KOG0618|consen 279 LPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENN 357 (1081)
T ss_pred hHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchh
Confidence 4444444444444444444444 3444444555555555555554
Q ss_pred --------------CCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEe
Q 005177 282 --------------AGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILF 347 (710)
Q Consensus 282 --------------~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 347 (710)
+...-..+.+..+|+.|+|++|++.......+.++..|+.|+||+|+++ .+|+.+..++.|++|.
T Consensus 358 ~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ 436 (1081)
T KOG0618|consen 358 HAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLR 436 (1081)
T ss_pred hHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHh
Confidence 3333233455667888888888887544455777888888888888887 6778888888888888
Q ss_pred ccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecccCC
Q 005177 348 IWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNN 400 (710)
Q Consensus 348 L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~ 400 (710)
..+|++. ..| .+..+++|+.+|+|.|+++-..-+..-..++|++||+++|.
T Consensus 437 ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 437 AHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred hcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCc
Confidence 8888887 667 78889999999999999974433333334889999999997
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.3e-22 Score=192.35 Aligned_cols=242 Identities=18% Similarity=0.275 Sum_probs=174.6
Q ss_pred hhhhcCCCCCccEEEEcCCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 451 CEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 451 ~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
...+.+...|..++|+.+.+ .+++|.+.... .-.+.|.+|.-.|+-..||||.+++|.|.......++..|||.||
T Consensus 195 ~tkl~e~hsgelwrgrwqgn-divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs 273 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQGN-DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS 273 (448)
T ss_pred hhhhccCCCcccccccccCc-chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence 35567788999999998544 45667776432 235679999999999999999999999999999999999999999
Q ss_pred hhhhhhcC----CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccc-ccccCCCCccc
Q 005177 528 LSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL-TQLADGSFPAK 602 (710)
Q Consensus 528 L~~~l~~~----~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~-~~~~~~~~~~~ 602 (710)
|+..||.. .+..+..+++.++|+|++|||+. .|-|.---+.+..|++|++.+++|+--. +++ ++..+ ....
T Consensus 274 lynvlhe~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad-~kfsfqe~g--r~y~ 349 (448)
T KOG0195|consen 274 LYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMAD-TKFSFQEVG--RAYS 349 (448)
T ss_pred HHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheeccc-ceeeeeccc--cccC
Confidence 99999973 46788899999999999999985 5556666899999999999999875211 111 12111 1123
Q ss_pred ccccCchhhhhccCC---ccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHH
Q 005177 603 IAWTESGEFYNAMKE---EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 679 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~---~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (710)
.+|+++ |.....+. -..+|+|||.+++||+.|+..||.+-...+--+.. .+... . ...++ .....+.+
T Consensus 350 pawmsp-ealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmki-alegl-r---v~ipp---gis~hm~k 420 (448)
T KOG0195|consen 350 PAWMSP-EALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKI-ALEGL-R---VHIPP---GISRHMNK 420 (448)
T ss_pred cccCCH-HHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhh-hhccc-c---ccCCC---CccHHHHH
Confidence 455544 54443322 23579999999999999999998754433211110 01110 0 11122 23455667
Q ss_pred HHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 680 VALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 680 l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
++.-|...||.+||.+..|+-.|++++
T Consensus 421 lm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 421 LMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred HHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 788899999999999999999998875
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.4e-23 Score=230.77 Aligned_cols=268 Identities=29% Similarity=0.362 Sum_probs=202.1
Q ss_pred CCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEE
Q 005177 124 LTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLH 203 (710)
Q Consensus 124 l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 203 (710)
-.+|+++|+|+|++++ +|++++.+.+|+.++..+|+++ .+|..+..+++|+.|.+.+|.+. -+|.....+++|++|+
T Consensus 240 p~nl~~~dis~n~l~~-lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLd 316 (1081)
T KOG0618|consen 240 PLNLQYLDISHNNLSN-LPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLD 316 (1081)
T ss_pred cccceeeecchhhhhc-chHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeee
Confidence 3567777777777774 5677777888888888888775 67777777778888888877776 5666777788888888
Q ss_pred ecCCcCCCCCcccc-cccc-cccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEcccccc
Q 005177 204 LAGNLLNDQIPAEL-GMLK-TVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQL 281 (710)
Q Consensus 204 L~~N~l~~~~p~~l-~~l~-~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l 281 (710)
|..|++. .+|+.+ ..+. .|+.|..+.|.+....-..=..++.|+.|.+.+|.++...-+.+.++.+|+.|+|++|++
T Consensus 317 L~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL 395 (1081)
T KOG0618|consen 317 LQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRL 395 (1081)
T ss_pred ehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeeccccc
Confidence 8888875 344432 2222 256666666665533222223567899999999999988777889999999999999999
Q ss_pred CCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCC-CCcc
Q 005177 282 AGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGS-LPEN 360 (710)
Q Consensus 282 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~-~p~~ 360 (710)
.......+.++..|+.|+||+|++. .+|..+.++..|++|...+|++. .+| .+..++.|+.+|++.|+++.. +|..
T Consensus 396 ~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~ 472 (1081)
T KOG0618|consen 396 NSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEA 472 (1081)
T ss_pred ccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhh
Confidence 8655566789999999999999998 68999999999999999999998 677 899999999999999999844 3443
Q ss_pred cCCCCCCcEEECCCCcCCccCcccccCCCceeeEecccC
Q 005177 361 LGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSN 399 (710)
Q Consensus 361 l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N 399 (710)
. ..++|++||+++|.-.-.--..+-.+..+...+++-|
T Consensus 473 ~-p~p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 473 L-PSPNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred C-CCcccceeeccCCcccccchhhhHHhhhhhheecccC
Confidence 3 3389999999999832222233334455555666555
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.6e-21 Score=220.21 Aligned_cols=270 Identities=22% Similarity=0.398 Sum_probs=210.7
Q ss_pred eeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCC
Q 005177 69 KCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSL 148 (710)
Q Consensus 69 ~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L 148 (710)
.|-. ...+.++++..++.. +|..+ .+.|+.|+|++|+++ .+|..+. ++|++|+|++|+|+ .+|..+.
T Consensus 174 ~Cl~--~~~~~L~L~~~~Lts-LP~~I----p~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~-- 240 (754)
T PRK15370 174 DCLK--NNKTELRLKILGLTT-IPACI----PEQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP-- 240 (754)
T ss_pred hhcc--cCceEEEeCCCCcCc-CCccc----ccCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--
Confidence 4654 346778888888773 56544 347999999999998 5777664 58999999999998 5676654
Q ss_pred CCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccccccccccccc
Q 005177 149 RNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEI 228 (710)
Q Consensus 149 ~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l 228 (710)
.+|+.|+|++|.++ .+|..+. ++|+.|+|++|+++ .+|..+. ++|+.|++++|++++ +|..+. ++|+.|++
T Consensus 241 ~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~L 311 (754)
T PRK15370 241 DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNV 311 (754)
T ss_pred ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHh
Confidence 47999999999998 6787765 58999999999998 5787664 589999999999984 666553 57999999
Q ss_pred ccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCC
Q 005177 229 GYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGP 308 (710)
Q Consensus 229 ~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 308 (710)
++|.++. +|..+. ++|+.|++++|.+++ +|..+. ++|+.|++++|+++ .+|..+. ++|+.|++++|+++.
T Consensus 312 s~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt~- 381 (754)
T PRK15370 312 QSNSLTA-LPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALTN- 381 (754)
T ss_pred cCCcccc-CCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCCC-
Confidence 9999984 565443 689999999999985 676654 79999999999998 4666553 689999999999994
Q ss_pred CCccccCCCCCCEEEcccccCcccCCcc----cCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCcc
Q 005177 309 IPESFADLKNLRLLSLMYNEMSGTVPES----LVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGS 380 (710)
Q Consensus 309 ~p~~~~~l~~L~~L~Ls~N~l~g~~p~~----~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ 380 (710)
+|..+. .+|+.|++++|+++ .+|.. ...++++..|++.+|.++. ..+.+|+.+ ++.+.+.|.
T Consensus 382 LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls~------~tl~~L~~L-l~s~~~~gp 447 (754)
T PRK15370 382 LPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFSE------RTIQNMQRL-MSSVGYQGP 447 (754)
T ss_pred CCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCccH------HHHHHHHHh-hhcccccCC
Confidence 666654 37999999999998 45654 4456889999999999872 233445555 455666554
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.3e-21 Score=201.21 Aligned_cols=137 Identities=19% Similarity=0.196 Sum_probs=111.6
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEcC--CCcEEEEEEeecc------chhHHHHHHHHHHHhccCCCCcee-EEEEEEcC
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVLP--TGITVSVKKIEWG------ATRIKIVSEFITRIGTVRHKNLIR-LLGFCYNR 513 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~~--~g~~vAvK~l~~~------~~~~~~~~~e~~~l~~l~H~niv~-l~g~~~~~ 513 (710)
...|. ..+.||+|+||.||+|... +|..||||++... ....+.+.+|++++++++|+|+|+ +++ .
T Consensus 17 ~~~Y~--~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~----~ 90 (365)
T PRK09188 17 SARFV--ETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA----T 90 (365)
T ss_pred cCCce--EccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE----c
Confidence 34466 7889999999999999863 6888999987532 123566899999999999999995 443 2
Q ss_pred CceeEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCC-CCCCeEecCCCceEEcccCccccc
Q 005177 514 HQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDL-KASNIVFDENMEPHLAEFGFKYLT 592 (710)
Q Consensus 514 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDl-k~~NiLl~~~~~~kl~DfGla~~~ 592 (710)
+..|+||||+++++|... .. .. ...++.++++||+|||+. +|+|||| ||+|||++.++.+||+|||+|+..
T Consensus 91 ~~~~LVmE~~~G~~L~~~-~~-~~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~ 162 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHLA-RP-HG---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQLASVF 162 (365)
T ss_pred CCcEEEEEccCCCCHHHh-Cc-cc---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECccceec
Confidence 467999999999999732 21 11 246788999999999998 9999999 999999999999999999999865
Q ss_pred c
Q 005177 593 Q 593 (710)
Q Consensus 593 ~ 593 (710)
.
T Consensus 163 ~ 163 (365)
T PRK09188 163 R 163 (365)
T ss_pred c
Confidence 4
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1e-22 Score=204.54 Aligned_cols=226 Identities=23% Similarity=0.319 Sum_probs=143.9
Q ss_pred cEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCC-CCCCcCCchhccCCCCCCEEEccC
Q 005177 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFS-NSFSGSVPAEISQLEHLKVLNLAG 182 (710)
Q Consensus 104 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~-N~l~~~~p~~~~~L~~L~~L~L~~ 182 (710)
..++|..|.|+...|..|..+++||.||||+|+|+.+-|+.|.+|++|..|-+.+ |+|+...-..|++|.+|+.|.+.-
T Consensus 70 veirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNa 149 (498)
T KOG4237|consen 70 VEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNA 149 (498)
T ss_pred eEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcCh
Confidence 4566666777655555666677777777777777766677777776666655554 666654445566666666666666
Q ss_pred CCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccc-----------------------------
Q 005177 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFY----------------------------- 233 (710)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~----------------------------- 233 (710)
|++.-...+.|..|++|..|.+.+|.+...-...+..+..++++.+..|.+
T Consensus 150 n~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~ 229 (498)
T KOG4237|consen 150 NHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPY 229 (498)
T ss_pred hhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecchH
Confidence 666666666666666666666666665432223455555555555444321
Q ss_pred --------------------------------cccCC-ccccCCCccchhccccccCCccCchhccCCCCCcEEEccccc
Q 005177 234 --------------------------------QGNIP-WQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQ 280 (710)
Q Consensus 234 --------------------------------~g~~p-~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~ 280 (710)
.+..| ..|..+++|+.|+|++|++++.-+.+|..+..++.|.|..|+
T Consensus 230 rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~ 309 (498)
T KOG4237|consen 230 RLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNK 309 (498)
T ss_pred HHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcch
Confidence 01111 135567777777777777777777777777777777777777
Q ss_pred cCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccC
Q 005177 281 LAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEM 329 (710)
Q Consensus 281 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 329 (710)
+...-...|.++..|+.|+|.+|+|+..-|.+|..+.+|..|+|-.|.+
T Consensus 310 l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~ 358 (498)
T KOG4237|consen 310 LEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPF 358 (498)
T ss_pred HHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcc
Confidence 7655555667777777777777777777777777777777777766644
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.1e-20 Score=179.36 Aligned_cols=135 Identities=9% Similarity=0.078 Sum_probs=105.9
Q ss_pred hhhcCCCCCccEEEEcCCCcEEEEEEeeccchh---------------------------HHHHHHHHHHHhccCCCCce
Q 005177 452 EEAARPQSAAGCKAVLPTGITVSVKKIEWGATR---------------------------IKIVSEFITRIGTVRHKNLI 504 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~---------------------------~~~~~~e~~~l~~l~H~niv 504 (710)
..||+|++|.||+|..++|+.||||.++.+... ......|++.+.++.|+++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~ 82 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP 82 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 579999999999999889999999999764211 01223488999999888764
Q ss_pred eEEEEEEcCCceeEEEeecCCCChhhh-hh-cCCCHHHHHHHHHHHHHHHHHH-hcCCCCCceecCCCCCCeEecCCCce
Q 005177 505 RLLGFCYNRHQAYLLYDYLPNGNLSEK-IR-TKRDWAAKYKIVLGVARGLCFL-HHDCYPAIPHGDLKASNIVFDENMEP 581 (710)
Q Consensus 505 ~l~g~~~~~~~~~lv~Ey~~~gsL~~~-l~-~~~~~~~~~~i~~~ia~gL~yL-H~~~~~~iiHrDlk~~NiLl~~~~~~ 581 (710)
....+.. ...+|||||++++++... +. ...+..+...++.|++.+|+|+ |+. +|+||||||+||+++ ++.+
T Consensus 83 ~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~-~~~v 156 (190)
T cd05147 83 CPEPILL--KSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH-DGKL 156 (190)
T ss_pred CCcEEEe--cCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE-CCcE
Confidence 4333322 234899999998877654 32 2567788899999999999999 566 999999999999998 4789
Q ss_pred EEcccCccccc
Q 005177 582 HLAEFGFKYLT 592 (710)
Q Consensus 582 kl~DfGla~~~ 592 (710)
+++|||+|...
T Consensus 157 ~LiDFG~a~~~ 167 (190)
T cd05147 157 YIIDVSQSVEH 167 (190)
T ss_pred EEEEccccccC
Confidence 99999998643
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.3e-20 Score=197.29 Aligned_cols=208 Identities=22% Similarity=0.352 Sum_probs=154.9
Q ss_pred HhccCCCCceeEEEEEEcCCceeEEEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCc-eecCCCC
Q 005177 495 IGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAI-PHGDLKA 570 (710)
Q Consensus 495 l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~i-iHrDlk~ 570 (710)
|+.+.|.|+.+++|.+.++...+.|.+||+.|+|.|.+.. +++|..+..++.++++||+|+|+. +| .|+.+++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l~s 77 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGALKS 77 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcC---cceeeeeecc
Confidence 4578899999999999999999999999999999999976 678999999999999999999987 55 8999999
Q ss_pred CCeEecCCCceEEcccCccccccccC---CCCc-c-cccccCchhhhhcc-------CCccccceeeHHHHHHHHHhCCC
Q 005177 571 SNIVFDENMEPHLAEFGFKYLTQLAD---GSFP-A-KIAWTESGEFYNAM-------KEEMYMDVYGFGEIILEILTNGR 638 (710)
Q Consensus 571 ~NiLl~~~~~~kl~DfGla~~~~~~~---~~~~-~-~~~~~~~~e~~~~~-------~~~~~~DVySfGvvl~Elltg~~ 638 (710)
+|+++|..+.+|++|||+..+..... .... . ..- +++||..... ..+.++||||||++++|+++.+.
T Consensus 78 ~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~l-w~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~ 156 (484)
T KOG1023|consen 78 SNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALL-WTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSG 156 (484)
T ss_pred ccceeeeeEEEEechhhhcccccccccccccchhHHHHh-ccCHHHhcccccccccccccccCCeehHHHHHHHHHhccC
Confidence 99999999999999999987653210 0111 1 222 4455554432 14667999999999999999999
Q ss_pred CCCCCCCCCccccccccccccc-ccccCCCcch-H-HHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCCC
Q 005177 639 LTNAGSSLQNKPIDGLLGEMYN-ENEVGSSSSL-Q-DEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 708 (710)
Q Consensus 639 p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~-~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~ 708 (710)
||......... .+.+..+.+ ......+... . +....+..++.+||..+|++||++++|-..++.+.+.
T Consensus 157 ~~~~~~~~~~~--~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 157 PFDLRNLVEDP--DEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred ccccccccCCh--HHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence 99854322211 111111111 1111111111 1 2334688999999999999999999999999888764
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.1e-19 Score=175.01 Aligned_cols=136 Identities=11% Similarity=0.113 Sum_probs=108.6
Q ss_pred hhhcCCCCCccEEEEcCCCcEEEEEEeeccchh---------------------------HHHHHHHHHHHhccCCCCce
Q 005177 452 EEAARPQSAAGCKAVLPTGITVSVKKIEWGATR---------------------------IKIVSEFITRIGTVRHKNLI 504 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~---------------------------~~~~~~e~~~l~~l~H~niv 504 (710)
..||+|++|.||+|...+|+.||||.++.+... ...+..|.+.+.+++|+++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 82 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVP 82 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 568999999999999879999999999864210 11235788899999999986
Q ss_pred eEEEEEEcCCceeEEEeecCCCChhhh-hhc-CCCHHHHHHHHHHHHHHHHHHhc-CCCCCceecCCCCCCeEecCCCce
Q 005177 505 RLLGFCYNRHQAYLLYDYLPNGNLSEK-IRT-KRDWAAKYKIVLGVARGLCFLHH-DCYPAIPHGDLKASNIVFDENMEP 581 (710)
Q Consensus 505 ~l~g~~~~~~~~~lv~Ey~~~gsL~~~-l~~-~~~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlk~~NiLl~~~~~~ 581 (710)
....+... ..++||||++++++... +.. ..+.....+++.+++.++.|+|+ . +|+||||||+||+++ ++.+
T Consensus 83 ~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~-~~~~ 156 (190)
T cd05145 83 VPEPILLK--KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH-DGKP 156 (190)
T ss_pred CceEEEec--CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE-CCCE
Confidence 54444433 34899999998855433 332 45667788999999999999999 7 999999999999999 8899
Q ss_pred EEcccCcccccc
Q 005177 582 HLAEFGFKYLTQ 593 (710)
Q Consensus 582 kl~DfGla~~~~ 593 (710)
+++|||+++...
T Consensus 157 ~liDFG~a~~~~ 168 (190)
T cd05145 157 YIIDVSQAVELD 168 (190)
T ss_pred EEEEcccceecC
Confidence 999999987653
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.3e-20 Score=179.13 Aligned_cols=168 Identities=13% Similarity=0.108 Sum_probs=127.9
Q ss_pred hcCCchhhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchh----H------HHHHHHHHHHhccCCCCceeEEEEEEcC
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATR----I------KIVSEFITRIGTVRHKNLIRLLGFCYNR 513 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~----~------~~~~~e~~~l~~l~H~niv~l~g~~~~~ 513 (710)
..|. ..+++|.|+||.||.... ++..+|||.+...... . ..+.+|++.+.+++||+|....+++...
T Consensus 31 ~~y~--~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 31 YNIK--TIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred CceE--EEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 3455 889999999999999765 6778999999753221 1 1268899999999999999999886543
Q ss_pred --------CceeEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcc
Q 005177 514 --------HQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 585 (710)
Q Consensus 514 --------~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~D 585 (710)
+..+|||||++|.+|.++.. .+ .....+++.++..+|+. +++|||+||+||+++.++ ++++|
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~--~~----~~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g-i~liD 177 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE--IS----EDVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG-LRIID 177 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh--cc----HHHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC-EEEEE
Confidence 35799999999999988742 12 23456999999999999 999999999999999888 99999
Q ss_pred cCccccccccCCCCcccccccCchhhhhccCCccccceeeHHHHHHHHH
Q 005177 586 FGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEIL 634 (710)
Q Consensus 586 fGla~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ell 634 (710)
||..+..... .+...+.....+..++|+||||+.+.-..
T Consensus 178 fg~~~~~~e~----------~a~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 178 LSGKRCTAQR----------KAKDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCCcccccch----------hhHHHHHHHhHhcccccccceeEeehHHH
Confidence 9976543211 11112333344567899999999876543
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.8e-21 Score=195.66 Aligned_cols=278 Identities=22% Similarity=0.221 Sum_probs=222.1
Q ss_pred CCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccC-CCCCCCCCcccCCCCCCCeEEe
Q 005177 126 SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG-SYFSGPIPSQFGSFKSLEFLHL 204 (710)
Q Consensus 126 ~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~L 204 (710)
.-..++|..|+|+...|++|+.+++|+.||||+|+|+..-|+.|.+|++|..|-+.+ |+|+...-..|++|.+|+.|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 456789999999998889999999999999999999999999999999998887766 9999766678999999999999
Q ss_pred cCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCC------------ccCchhccCCCCCc
Q 005177 205 AGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS------------GSIPKELSNLTKLE 272 (710)
Q Consensus 205 ~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~------------g~~p~~l~~l~~L~ 272 (710)
.-|++.-...+.+..|++|..|.+..|.+...--..+..+..++.+.+..|.+- -..|.+++...-..
T Consensus 148 Nan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~ 227 (498)
T KOG4237|consen 148 NANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVS 227 (498)
T ss_pred ChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecc
Confidence 999999888899999999999999999887433337888889999998888732 22344555555555
Q ss_pred EEEccccccCCCCCcccc-CCCCCCEEEccCCCCCCCCC-ccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccC
Q 005177 273 SLFLFRNQLAGQVPWEFS-RVTTLKSLDLSDNRLSGPIP-ESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWN 350 (710)
Q Consensus 273 ~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 350 (710)
...+.++++...-+.-|. .+.++.+=-.+.+...+.-| ..|..+++|+.|+|++|++++.-+.+|..+..++.|+|..
T Consensus 228 p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~ 307 (498)
T KOG4237|consen 228 PYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTR 307 (498)
T ss_pred hHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCc
Confidence 556666666543333332 11122221223333334444 3588899999999999999998899999999999999999
Q ss_pred CCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecccCCccc
Q 005177 351 NYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTG 403 (710)
Q Consensus 351 N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~l~g 403 (710)
|++...-...+.+++.|+.|+|.+|+|+-.-|..|..+..|.+|+|..|.+.-
T Consensus 308 N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~C 360 (498)
T KOG4237|consen 308 NKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNC 360 (498)
T ss_pred chHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccC
Confidence 99986666678889999999999999998889999999999999999998754
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.6e-21 Score=201.94 Aligned_cols=105 Identities=18% Similarity=0.129 Sum_probs=46.0
Q ss_pred EECCCCcCcc-cCCccccCCCCCcEEECcCCCCCCC----CChhhcCCCCCCEEECCCCCCCc------CCchhccCCCC
Q 005177 106 LNLSHNSFSG-QFPVEIFNLTSLISLDISRNNFSGH----FPGGIQSLRNLLVLDAFSNSFSG------SVPAEISQLEH 174 (710)
Q Consensus 106 L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~L~~L~~L~L~~N~l~~------~~p~~~~~L~~ 174 (710)
|+|.++.+++ ..+..+..+.+|+.|+++++.++.. ++..+...++|+.|+++++.+.+ .++..+..+++
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~ 82 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCG 82 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCc
Confidence 3444444441 2222333444455555555544321 23333344445555555544431 12334444555
Q ss_pred CCEEEccCCCCCCCCCcccCCCCC---CCeEEecCCcCC
Q 005177 175 LKVLNLAGSYFSGPIPSQFGSFKS---LEFLHLAGNLLN 210 (710)
Q Consensus 175 L~~L~L~~n~l~~~~p~~~~~l~~---L~~L~L~~N~l~ 210 (710)
|+.|++++|.+.+..+..+..+.+ |+.|++++|.++
T Consensus 83 L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~ 121 (319)
T cd00116 83 LQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLG 121 (319)
T ss_pred eeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccc
Confidence 555555555554433333333333 555555555544
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.5e-18 Score=180.35 Aligned_cols=246 Identities=18% Similarity=0.189 Sum_probs=180.8
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCC-CceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHK-NLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~-niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
....+|.|+||.||++... ..+|+|.+..... ....+.+|+..+.++.|+ +|+++.+++......++++||+.
T Consensus 4 ~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 81 (384)
T COG0515 4 ILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVD 81 (384)
T ss_pred eEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCC
Confidence 4567889999999999876 8899999986432 366788999999999988 79999999977777899999999
Q ss_pred CCChhhhhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC-ceEEcccCccccccccCC-
Q 005177 525 NGNLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM-EPHLAEFGFKYLTQLADG- 597 (710)
Q Consensus 525 ~gsL~~~l~~-----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~-~~kl~DfGla~~~~~~~~- 597 (710)
++++.+++.. .........++.|++.++.|+|.. +++|||+||+||+++... .++++|||.++.......
T Consensus 82 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 82 GGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred CCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 9999987765 356777889999999999999999 899999999999999988 799999999875433221
Q ss_pred -------CCcccccccCchhhhhc---cCCccccceeeHHHHHHHHHhCCCCCCCCCCC--Ccccccccccccccc-ccc
Q 005177 598 -------SFPAKIAWTESGEFYNA---MKEEMYMDVYGFGEIILEILTNGRLTNAGSSL--QNKPIDGLLGEMYNE-NEV 664 (710)
Q Consensus 598 -------~~~~~~~~~~~~e~~~~---~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~--~~~~~~~~~~~~~~~-~~~ 664 (710)
....+..++.+||.... .......|+||+|++++++++|..|+...... ..... ........+ ...
T Consensus 159 ~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 237 (384)
T COG0515 159 SSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTL-KIILELPTPSLAS 237 (384)
T ss_pred ccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHH-HHHHhcCCccccc
Confidence 11224445677777665 57788899999999999999999996533321 00000 000010000 000
Q ss_pred CCCcch-HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 665 GSSSSL-QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 665 ~~~~~~-~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
...... ......+.+++..|+..+|..|.++.+....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 238 PLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 000000 1112456678888999999999998876653
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.9e-19 Score=202.45 Aligned_cols=245 Identities=14% Similarity=0.074 Sum_probs=170.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEee----ccchh---HHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIE----WGATR---IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~----~~~~~---~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
...++|.|++|.|+.... ...+..+.|... .+... ...+..|..+=.+++|||++..+..+.+.+..+-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 457889999997776653 333334444332 21111 2225566667778999999988888877776666699
Q ss_pred ecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC-
Q 005177 522 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 598 (710)
Q Consensus 522 y~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~- 598 (710)
||++ ||+..+.. .+...++.-+..|+.+|++|+|.. +|.|||+|++|+++..++.+||+|||.+....-....
T Consensus 402 ~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~ 477 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKN 477 (601)
T ss_pred cccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccCcchh
Confidence 9999 99999987 467777888999999999999999 9999999999999999999999999988765322111
Q ss_pred ------CcccccccCchhhhhccCCcc-ccceeeHHHHHHHHHhCCCCCCCCCCCCccccc-ccccccccccccCCCcch
Q 005177 599 ------FPAKIAWTESGEFYNAMKEEM-YMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GLLGEMYNENEVGSSSSL 670 (710)
Q Consensus 599 ------~~~~~~~~~~~e~~~~~~~~~-~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 670 (710)
..+.-+ |.+||......+.. ..||||.|||+..|++|+.||............ ....+.... .......
T Consensus 478 ~~~~~g~~gS~p-Y~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~--~~~~~~~ 554 (601)
T KOG0590|consen 478 IHESSGIVGSDP-YLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIF--EGPNRLL 554 (601)
T ss_pred hhhhcCcccCCc-CcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccc--cChHHHH
Confidence 111233 44577776666554 479999999999999999998733221110000 000000000 1111223
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 671 QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 671 ~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.........++.++++.+|.+|-||++|++.
T Consensus 555 ~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 555 SLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred HhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 3444567788999999999999999999863
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4e-18 Score=166.91 Aligned_cols=134 Identities=15% Similarity=0.149 Sum_probs=105.1
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeecc-chhHHHHHHHHHHHhcc-----CCCCceeEEEEEEcCC---cee-EE
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWG-ATRIKIVSEFITRIGTV-----RHKNLIRLLGFCYNRH---QAY-LL 519 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~-~~~~~~~~~e~~~l~~l-----~H~niv~l~g~~~~~~---~~~-lv 519 (710)
....||+|++|.||. ...++.. +||++... ....+.+.+|++.++++ .||||++++|++.++. ..+ +|
T Consensus 6 ~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I 83 (210)
T PRK10345 6 EQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI 83 (210)
T ss_pred CcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence 668899999999996 2234444 79988754 22456789999999999 5799999999998863 433 78
Q ss_pred Eee--cCCCChhhhhhcCC-CHHHHHHHHHHHHHHH-HHHhcCCCCCceecCCCCCCeEecC----CCceEEcc-cCccc
Q 005177 520 YDY--LPNGNLSEKIRTKR-DWAAKYKIVLGVARGL-CFLHHDCYPAIPHGDLKASNIVFDE----NMEPHLAE-FGFKY 590 (710)
Q Consensus 520 ~Ey--~~~gsL~~~l~~~~-~~~~~~~i~~~ia~gL-~yLH~~~~~~iiHrDlk~~NiLl~~----~~~~kl~D-fGla~ 590 (710)
+|| +++|+|.+++.+.. +.. ..++.++..++ +|||+. +|+||||||+|||++. +..++|+| ||...
T Consensus 84 ~e~~G~~~~tL~~~l~~~~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~ 158 (210)
T PRK10345 84 ADFDGKPSITLTEFAEQCRYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCDNIGEST 158 (210)
T ss_pred ecCCCCcchhHHHHHHcccccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEECCCCcc
Confidence 999 66899999997632 333 45678888888 999999 9999999999999974 34799999 55433
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.1e-20 Score=196.81 Aligned_cols=251 Identities=22% Similarity=0.226 Sum_probs=158.0
Q ss_pred EEECcCCCCC-CCCChhhcCCCCCCEEECCCCCCCc----CCchhccCCCCCCEEEccCCCCCC------CCCcccCCCC
Q 005177 129 SLDISRNNFS-GHFPGGIQSLRNLLVLDAFSNSFSG----SVPAEISQLEHLKVLNLAGSYFSG------PIPSQFGSFK 197 (710)
Q Consensus 129 ~L~Ls~N~l~-~~~p~~l~~L~~L~~L~L~~N~l~~----~~p~~~~~L~~L~~L~L~~n~l~~------~~p~~~~~l~ 197 (710)
.|+|..+.++ +..+..+..+.+|+.|+++++.++. .++..+...++|++|+++++.+.+ .++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 5788888887 4556667788889999999999864 356677788889999999988863 2344567788
Q ss_pred CCCeEEecCCcCCCCCccccccccc---ccccccccccccc----cCCccccCC-CccchhccccccCCcc----Cchhc
Q 005177 198 SLEFLHLAGNLLNDQIPAELGMLKT---VTHMEIGYNFYQG----NIPWQLGNM-SEVQYLDIAGANLSGS----IPKEL 265 (710)
Q Consensus 198 ~L~~L~L~~N~l~~~~p~~l~~l~~---L~~L~l~~n~~~g----~~p~~l~~l-~~L~~L~ls~n~l~g~----~p~~l 265 (710)
+|+.|++++|.+.+..+..+..+.+ |++|+++.|.+++ .+...+..+ ++|+.|++++|.+++. ++..+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 9999999999887766666655555 7777777776652 222334445 6677777777776632 23344
Q ss_pred cCCCCCcEEEccccccCCC----CCccccCCCCCCEEEccCCCCCCC----CCccccCCCCCCEEEcccccCcccCCccc
Q 005177 266 SNLTKLESLFLFRNQLAGQ----VPWEFSRVTTLKSLDLSDNRLSGP----IPESFADLKNLRLLSLMYNEMSGTVPESL 337 (710)
Q Consensus 266 ~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 337 (710)
..+++|+.|++++|.+++. ++..+...++|+.|++++|.+++. ++..+..+++|+.|++++|.+++.....+
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l 241 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAAL 241 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHH
Confidence 4556677777777666632 222233445666777766666533 22344555666666666666654222111
Q ss_pred C-----CCCCCcEEeccCCCCCC----CCCcccCCCCCCcEEECCCCcCCc
Q 005177 338 V-----QLPSLEILFIWNNYFSG----SLPENLGRNSKLRWVDVSTNNFNG 379 (710)
Q Consensus 338 ~-----~l~~L~~L~L~~N~l~g----~~p~~l~~~~~L~~L~ls~N~l~g 379 (710)
. ..+.|++|++++|.++. .+...+..+++|+.+++++|.++.
T Consensus 242 ~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~ 292 (319)
T cd00116 242 ASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGE 292 (319)
T ss_pred HHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcH
Confidence 1 13566666666666651 223334444566666666666653
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.7e-18 Score=163.08 Aligned_cols=179 Identities=13% Similarity=0.032 Sum_probs=129.4
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccch-----hHHHHHHHHHHHhccC-CCCceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT-----RIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~-----~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
....+++|+||.||.+.- .+..++.+.+....- ....+.+|+++|+++. |+++.+++++ +..++||||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 557889999999997665 677788888775432 1336889999999996 4889999886 3469999999
Q ss_pred CCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCC-CCCCeEecCCCceEEcccCccccccccCCC----
Q 005177 524 PNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDL-KASNIVFDENMEPHLAEFGFKYLTQLADGS---- 598 (710)
Q Consensus 524 ~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDl-k~~NiLl~~~~~~kl~DfGla~~~~~~~~~---- 598 (710)
+|.+|.+.+.. ....+..|++++++|+|+. +|+|||| ||+|||++.++.++|+|||+|........-
T Consensus 81 ~G~~L~~~~~~-----~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L 152 (218)
T PRK12274 81 AGAAMYQRPPR-----GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLL 152 (218)
T ss_pred cCccHHhhhhh-----hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHH
Confidence 99898765432 1245778999999999999 9999999 799999999999999999999754322110
Q ss_pred Cc-------ccccccC-----chhhhhccCCc-cccceeeHHHHHHHHHhCCCCCC
Q 005177 599 FP-------AKIAWTE-----SGEFYNAMKEE-MYMDVYGFGEIILEILTNGRLTN 641 (710)
Q Consensus 599 ~~-------~~~~~~~-----~~e~~~~~~~~-~~~DVySfGvvl~Elltg~~p~~ 641 (710)
.. ....-|+ +.|-..-...+ ...+.++-|.-+|.++||+.+..
T Consensus 153 ~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 153 AREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred HHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 00 0000011 11211111122 34588999999999999988755
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.2e-20 Score=165.07 Aligned_cols=155 Identities=32% Similarity=0.571 Sum_probs=76.2
Q ss_pred CCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeE
Q 005177 123 NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFL 202 (710)
Q Consensus 123 ~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 202 (710)
++++.+.|.||+|+++ .+|..+..|.+|++|++++|+++ .+|.+++.|++|+.|++.-|++. .+|..|+.++.|++|
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhh
Confidence 3344444444444444 23334444444444444444444 44555555555555555555554 455555555555555
Q ss_pred EecCCcCCC-CCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEcccccc
Q 005177 203 HLAGNLLND-QIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQL 281 (710)
Q Consensus 203 ~L~~N~l~~-~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l 281 (710)
||..|+++. .+|..|..++.|+.|+++.|.|. -+|..++++++|+.|.+..|.+- .+|..++.+++|+.|.+.+|++
T Consensus 108 dltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl 185 (264)
T KOG0617|consen 108 DLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRL 185 (264)
T ss_pred hccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhccccee
Confidence 555555543 34555555555555555555443 34444444455555544444443 3444444444444444444444
Q ss_pred C
Q 005177 282 A 282 (710)
Q Consensus 282 ~ 282 (710)
+
T Consensus 186 ~ 186 (264)
T KOG0617|consen 186 T 186 (264)
T ss_pred e
Confidence 4
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.72 E-value=1e-19 Score=163.13 Aligned_cols=163 Identities=28% Similarity=0.486 Sum_probs=144.5
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
+..+++|.||+|.++ .+|+.++.+.+|+.|++++|++. .+|.+++++++|+.|+++-|++. .+|..|+.++.|++||
T Consensus 32 ~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 667889999999997 67888999999999999999997 67889999999999999999988 7899999999999999
Q ss_pred ccCCCCCC-CCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCC
Q 005177 180 LAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS 258 (710)
Q Consensus 180 L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~ 258 (710)
|.+|++.. .+|..|..++.|+-|+|++|.+. .+|..++++++|+.|.+..|.+- ++|..++.++.|+.|.+.+|.++
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~ 186 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT 186 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceee
Confidence 99999863 57888889999999999999985 88999999999999999998876 68999999999999999999998
Q ss_pred ccCchhccCC
Q 005177 259 GSIPKELSNL 268 (710)
Q Consensus 259 g~~p~~l~~l 268 (710)
.+|..++++
T Consensus 187 -vlppel~~l 195 (264)
T KOG0617|consen 187 -VLPPELANL 195 (264)
T ss_pred -ecChhhhhh
Confidence 556556554
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.4e-17 Score=170.70 Aligned_cols=246 Identities=13% Similarity=0.074 Sum_probs=168.4
Q ss_pred hhhhhcCCCCCccEEEEcCC--CcEEEEEEeeccchh-HHHHHHHHHHHhccCC----CCceeEEEEE-EcCCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVLPT--GITVSVKKIEWGATR-IKIVSEFITRIGTVRH----KNLIRLLGFC-YNRHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~--g~~vAvK~l~~~~~~-~~~~~~e~~~l~~l~H----~niv~l~g~~-~~~~~~~lv~E 521 (710)
....||+|+||.||++.... ...+|+|.-...... ...+..|+.++..+.+ +++..+++.. ..++..++||+
T Consensus 22 i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~ 101 (322)
T KOG1164|consen 22 LGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMS 101 (322)
T ss_pred EeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEe
Confidence 78899999999999998644 357888877653222 2267778888887763 5888999988 47778999999
Q ss_pred ecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC-----CceEEcccCccccc
Q 005177 522 YLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-----MEPHLAEFGFKYLT 592 (710)
Q Consensus 522 y~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~-----~~~kl~DfGla~~~ 592 (710)
.+ |-+|.++... ..+-.+..+|+.|+..+|+++|+. +++||||||+|+++... ..+.+.|||+++..
T Consensus 102 l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~ 177 (322)
T KOG1164|consen 102 LL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRF 177 (322)
T ss_pred cc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEecCCCccc
Confidence 77 6799997743 457788999999999999999999 99999999999999864 46899999999832
Q ss_pred c--ccCC-------C---CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccc
Q 005177 593 Q--LADG-------S---FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYN 660 (710)
Q Consensus 593 ~--~~~~-------~---~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~ 660 (710)
. .... . ...++..|++.........+.+-|+||++-++.|+..|..|+.......... ...+...
T Consensus 178 ~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~---~~~~~~~ 254 (322)
T KOG1164|consen 178 KYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKS---KFEKDPR 254 (322)
T ss_pred cccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHH---HHHHHhh
Confidence 1 1110 0 0012333555555566677888999999999999999999886332211100 0000000
Q ss_pred ccccC-CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 661 ENEVG-SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 661 ~~~~~-~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
..... .....+.+ +.++...+-..+..++|....+...++..
T Consensus 255 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~ 297 (322)
T KOG1164|consen 255 KLLTDRFGDLKPEE---FAKILEYIDSLDYEDKPDYEKLAELLKDV 297 (322)
T ss_pred hhccccccCCChHH---HHHHHHHhhccCCcCCCCHHHHHHHHHHH
Confidence 00000 00111222 22333334447889999988888776544
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=6e-17 Score=160.83 Aligned_cols=133 Identities=17% Similarity=0.192 Sum_probs=113.5
Q ss_pred hhhcCCCCCccEEEEcCCCcEEEEEEeeccch---------hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 452 EEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---------RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~---------~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
+.||+|++|.||+|.. .|..|+||+...... ....+.+|++.+..++|++|.....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 4689999999999987 777899998653211 134577899999999999998888888778889999999
Q ss_pred cCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 523 LPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 523 ~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
+++++|.+++.... + .+..++.+++.+|.++|+. +++|||++|.||+++ ++.++|+|||.++.
T Consensus 81 ~~G~~L~~~~~~~~-~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG-M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc-H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999986533 3 7889999999999999998 999999999999999 78899999998754
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.3e-16 Score=160.30 Aligned_cols=135 Identities=11% Similarity=0.120 Sum_probs=106.1
Q ss_pred hhhhhcCCCCCccEEEE--cCCCcEEEEEEeeccch-------------------------hHHHHHHHHHHHhccCCCC
Q 005177 450 ECEEAARPQSAAGCKAV--LPTGITVSVKKIEWGAT-------------------------RIKIVSEFITRIGTVRHKN 502 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~--~~~g~~vAvK~l~~~~~-------------------------~~~~~~~e~~~l~~l~H~n 502 (710)
..+.||+|++|.||+|. ..+|+.||||.++.... ....+..|++.+.++.|..
T Consensus 32 i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~~ 111 (237)
T smart00090 32 IGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEAG 111 (237)
T ss_pred hCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 66789999999999998 67899999999875321 0123567899999987633
Q ss_pred --ceeEEEEEEcCCceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCC-ceecCCCCCCeEecC
Q 005177 503 --LIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPA-IPHGDLKASNIVFDE 577 (710)
Q Consensus 503 --iv~l~g~~~~~~~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~-iiHrDlk~~NiLl~~ 577 (710)
+.+.+++ ...++||||++++++...... .....+...++.|++.+++|||+. + |+|||+||+||+++
T Consensus 112 i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~NIli~- 183 (237)
T smart00090 112 VPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEYNILVH- 183 (237)
T ss_pred CCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChhhEEEE-
Confidence 3344443 235899999999888766532 233445578999999999999998 8 99999999999999
Q ss_pred CCceEEcccCccccc
Q 005177 578 NMEPHLAEFGFKYLT 592 (710)
Q Consensus 578 ~~~~kl~DfGla~~~ 592 (710)
++.++++|||.+...
T Consensus 184 ~~~i~LiDFg~a~~~ 198 (237)
T smart00090 184 DGKVVIIDVSQSVEL 198 (237)
T ss_pred CCCEEEEEChhhhcc
Confidence 889999999987654
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.3e-16 Score=156.71 Aligned_cols=132 Identities=14% Similarity=0.138 Sum_probs=105.9
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccch-----------------------hHHHHHHHHHHHhccCCCC--ce
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT-----------------------RIKIVSEFITRIGTVRHKN--LI 504 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~-----------------------~~~~~~~e~~~l~~l~H~n--iv 504 (710)
..+.||+|++|.||++..++|+.||||++..+.. ....+..|...+.++.|++ +.
T Consensus 19 ~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~ 98 (198)
T cd05144 19 LGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFPVP 98 (198)
T ss_pred cCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCCCC
Confidence 5678999999999999988999999998764321 0123567888888888874 44
Q ss_pred eEEEEEEcCCceeEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEc
Q 005177 505 RLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 584 (710)
Q Consensus 505 ~l~g~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~ 584 (710)
+.++ .+..++||||+++++|.+.... ....+++.+++.++.++|+. +|+||||||+||++++++.++|+
T Consensus 99 ~~~~----~~~~~lv~e~~~g~~L~~~~~~----~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Nill~~~~~~~li 167 (198)
T cd05144 99 KPID----WNRHAVVMEYIDGVELYRVRVL----EDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNILVDDDEKIYII 167 (198)
T ss_pred ceee----cCCceEEEEEeCCcchhhcccc----ccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccEEEcCCCcEEEE
Confidence 4443 2456899999999998876431 33467889999999999998 99999999999999999999999
Q ss_pred ccCccccc
Q 005177 585 EFGFKYLT 592 (710)
Q Consensus 585 DfGla~~~ 592 (710)
|||++...
T Consensus 168 Dfg~~~~~ 175 (198)
T cd05144 168 DWPQMVST 175 (198)
T ss_pred ECCccccC
Confidence 99988543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.1e-16 Score=157.30 Aligned_cols=129 Identities=19% Similarity=0.240 Sum_probs=107.4
Q ss_pred hhcCCCCCccEEEEcCCCcEEEEEEeeccc---------hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeec
Q 005177 453 EAARPQSAAGCKAVLPTGITVSVKKIEWGA---------TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~---------~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
.||+|++|.||+|.. +|..|++|...... .....+.+|++++.+++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 479999999999985 67889999865321 11355778999999999988766666666777789999999
Q ss_pred CCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 524 PNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 524 ~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
++++|.+.+..... .++.+++++|.++|+. +++|+|+||.||+++ ++.+++.|||+++.
T Consensus 80 ~g~~l~~~~~~~~~-----~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGND-----ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcHH-----HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999988754211 8899999999999998 999999999999999 88999999998765
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.8e-16 Score=179.48 Aligned_cols=155 Identities=31% Similarity=0.485 Sum_probs=86.3
Q ss_pred CCChhhHHHHHHHHhhCCCCCCCCCCCCCCCCCCCCCCCCCceeeeeeeCCCC----CcEEEEEcCCCCCcccCCcchhh
Q 005177 22 SANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACSWSGVKCNKNN----TIVVGINLSMKGLSGALPGKPLR 97 (710)
Q Consensus 22 ~~~~~~~~all~~k~~~~~~~~~l~~w~~~~~~~~~~~~~~C~w~gv~C~~~~----~~v~~l~l~~~~l~g~~~~~~~~ 97 (710)
.+.+.|.+||+++|+++.++.. .+|... +|. ...|.|.||.|+... ..|+.
T Consensus 368 ~t~~~~~~aL~~~k~~~~~~~~--~~W~g~----~C~-p~~~~w~Gv~C~~~~~~~~~~v~~------------------ 422 (623)
T PLN03150 368 KTLLEEVSALQTLKSSLGLPLR--FGWNGD----PCV-PQQHPWSGADCQFDSTKGKWFIDG------------------ 422 (623)
T ss_pred ccCchHHHHHHHHHHhcCCccc--CCCCCC----CCC-CcccccccceeeccCCCCceEEEE------------------
Confidence 4567799999999999976532 479631 110 112479999996311 12444
Q ss_pred hcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCE
Q 005177 98 IFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKV 177 (710)
Q Consensus 98 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~ 177 (710)
|+|++|.+.|.+|..+.++++|+.|+|++|.++|.+|..++.+++|+.|||++|+++|.+|+.+++|++|++
T Consensus 423 --------L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~ 494 (623)
T PLN03150 423 --------LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRI 494 (623)
T ss_pred --------EECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCE
Confidence 455555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred EEccCCCCCCCCCcccCCC-CCCCeEEecCCcC
Q 005177 178 LNLAGSYFSGPIPSQFGSF-KSLEFLHLAGNLL 209 (710)
Q Consensus 178 L~L~~n~l~~~~p~~~~~l-~~L~~L~L~~N~l 209 (710)
|+|++|+++|.+|..++.+ .++..+++.+|..
T Consensus 495 L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~~ 527 (623)
T PLN03150 495 LNLNGNSLSGRVPAALGGRLLHRASFNFTDNAG 527 (623)
T ss_pred EECcCCcccccCChHHhhccccCceEEecCCcc
Confidence 5555555555555554432 2444555555543
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.7e-16 Score=179.30 Aligned_cols=133 Identities=17% Similarity=0.199 Sum_probs=109.8
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeecc-c-------hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWG-A-------TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~-~-------~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
..+.||+|+||.||+|.......++.|++... . ...+.+.+|++++.+++|++++....++..++..++|||
T Consensus 337 ~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E 416 (535)
T PRK09605 337 PDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVME 416 (535)
T ss_pred ccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEE
Confidence 56889999999999998755443332223211 1 123567889999999999999998888888788899999
Q ss_pred ecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccc
Q 005177 522 YLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 592 (710)
Q Consensus 522 y~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~ 592 (710)
|+++++|.+++. .+..++.+++++|.|||+. +|+|||+||+||++ +++.++|+|||+++..
T Consensus 417 ~~~g~~L~~~l~------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 417 YIGGKDLKDVLE------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred ecCCCcHHHHHH------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 999999999875 4678999999999999998 99999999999999 5789999999998653
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.9e-17 Score=175.05 Aligned_cols=182 Identities=17% Similarity=0.127 Sum_probs=143.1
Q ss_pred hcCCCCCccEEEE----cCCCcEEEEEEeeccch---hHHHHHHHHHHHhccC-CCCceeEEEEEEcCCceeEEEeecCC
Q 005177 454 AARPQSAAGCKAV----LPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 454 ig~g~~g~vy~~~----~~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
+|+|.||.|+.+. ...|..+|.|.++.... .......|..++..++ ||.+|++.-.++.+...+++.+|..+
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 6889999998553 24577888888876321 1113445667777777 99999999999999999999999999
Q ss_pred CChhhhhhcCC--CHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCcccc
Q 005177 526 GNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKI 603 (710)
Q Consensus 526 gsL~~~l~~~~--~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 603 (710)
|++...+.... .......+...+|-|++++|.. +|+|||+|++||+++.+|++|+.|||+.+..-..... .+.
T Consensus 82 g~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~--cgt 156 (612)
T KOG0603|consen 82 GDLFTRLSKEVMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA--CGT 156 (612)
T ss_pred chhhhccccCCchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhhc--ccc
Confidence 99999887644 3334456677889999999998 9999999999999999999999999998865322211 223
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCC
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNA 642 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~ 642 (710)
.-|++||+.. .....+|.||||++++||+||-.|+..
T Consensus 157 ~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 157 YEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred hhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 3366777766 466778999999999999999998864
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.64 E-value=9.9e-17 Score=179.90 Aligned_cols=238 Identities=21% Similarity=0.219 Sum_probs=162.7
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccc--hhHHHHH---HHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA--TRIKIVS---EFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~--~~~~~~~---~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
-.+.+|++.|=+|.||+.+.|. |+||++-+.. ..-+.|. +|++ ...++|||.+++.-+-......|||=+|..
T Consensus 27 ~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRqyvk 104 (1431)
T KOG1240|consen 27 YVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQYVK 104 (1431)
T ss_pred eecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHHHHh
Confidence 4578999999999999998897 8899887532 2233333 3344 456789999998887777777899999997
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccc--ccc-CCCC
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT--QLA-DGSF 599 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~--~~~-~~~~ 599 (710)
+ +|+|.|.. .+...++.-|+.|+..|+.-+|.. +|.|+|||++|||+.+-..+.++||.--|.. ... ...+
T Consensus 105 h-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf 180 (1431)
T KOG1240|consen 105 H-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADF 180 (1431)
T ss_pred h-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCCCCcccc
Confidence 6 89999865 345566777999999999999999 9999999999999999999999999754432 111 1110
Q ss_pred -------cccccccCchhhhh---------ccC-CccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccccc
Q 005177 600 -------PAKIAWTESGEFYN---------AMK-EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN 662 (710)
Q Consensus 600 -------~~~~~~~~~~e~~~---------~~~-~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 662 (710)
...+.|-+|+.+.. ... .+.+.||||.|||++||++-++|.+.-..+-. . +.....++.
T Consensus 181 ~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~a--Y--r~~~~~~~e 256 (1431)
T KOG1240|consen 181 TFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLA--Y--RSGNADDPE 256 (1431)
T ss_pred eEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHh--H--hccCccCHH
Confidence 11344333332222 112 56778999999999999886555442110000 0 000001110
Q ss_pred ccCCCcchHHH--HHHHHHHHhhcCCCCCCCCCCHHHHHHHHh
Q 005177 663 EVGSSSSLQDE--IKLVLDVALLCTRSTPSDRPSMEEALKLLS 703 (710)
Q Consensus 663 ~~~~~~~~~~~--~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~ 703 (710)
...+. -.....+++.+++.||++|-++++.++.=.
T Consensus 257 ------~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~yr 293 (1431)
T KOG1240|consen 257 ------QLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQKYR 293 (1431)
T ss_pred ------HHHHhCcCccHHHHHHHHHccCchhccCHHHHHHhhh
Confidence 00000 123567888899999999999999987643
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.63 E-value=9.6e-16 Score=154.70 Aligned_cols=193 Identities=19% Similarity=0.237 Sum_probs=126.0
Q ss_pred cCCCCceeEEEEEEc---------------------------CCceeEEEeecCCCChhhhhhc-CCCHHHHHHHHHHHH
Q 005177 498 VRHKNLIRLLGFCYN---------------------------RHQAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVA 549 (710)
Q Consensus 498 l~H~niv~l~g~~~~---------------------------~~~~~lv~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia 549 (710)
-+|||||++.++|.+ +...|+||.-.+. +|.+++-. ..+...+.-|+.|+.
T Consensus 273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~~s~r~~~~~laQlL 351 (598)
T KOG4158|consen 273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRHRSYRTGRVILAQLL 351 (598)
T ss_pred CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCCCchHHHHHHHHHHH
Confidence 369999999988764 1246899887764 88888854 456666677888999
Q ss_pred HHHHHHhcCCCCCceecCCCCCCeEec--CCC--ceEEcccCccccccccCCC--------CcccccccCchhhhhccC-
Q 005177 550 RGLCFLHHDCYPAIPHGDLKASNIVFD--ENM--EPHLAEFGFKYLTQLADGS--------FPAKIAWTESGEFYNAMK- 616 (710)
Q Consensus 550 ~gL~yLH~~~~~~iiHrDlk~~NiLl~--~~~--~~kl~DfGla~~~~~~~~~--------~~~~~~~~~~~e~~~~~~- 616 (710)
+|+.|||.+ +|.|||+|+.|||+. +|. ...|+|||++-.....+-. ..++-+-..+||+....+
T Consensus 352 Eav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PG 428 (598)
T KOG4158|consen 352 EAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPG 428 (598)
T ss_pred HHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCC
Confidence 999999999 999999999999984 444 4678999987432211100 011112234556654432
Q ss_pred -----CccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCC
Q 005177 617 -----EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSD 691 (710)
Q Consensus 617 -----~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~ 691 (710)
.-.|+|.|+.|.+.||+++..-||.......-.. .-+.+..++ .-.......+.+++...+++||++
T Consensus 429 p~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~------r~Yqe~qLP--alp~~vpp~~rqlV~~lL~r~psk 500 (598)
T KOG4158|consen 429 PNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDT------RTYQESQLP--ALPSRVPPVARQLVFDLLKRDPSK 500 (598)
T ss_pred CceeeccchhhhhhhhhhHHHHhccCCcccccchheech------hhhhhhhCC--CCcccCChHHHHHHHHHhcCCccc
Confidence 2346899999999999999999988532211000 001111111 111112234567777888999999
Q ss_pred CCCHHHHHHHH
Q 005177 692 RPSMEEALKLL 702 (710)
Q Consensus 692 RPs~~evl~~L 702 (710)
||+.+-+.+.|
T Consensus 501 Rvsp~iAANvl 511 (598)
T KOG4158|consen 501 RVSPNIAANVL 511 (598)
T ss_pred cCCccHHHhHH
Confidence 99976555443
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.62 E-value=6.4e-16 Score=146.28 Aligned_cols=189 Identities=11% Similarity=0.045 Sum_probs=138.2
Q ss_pred hhhhhcCCCCCccEEEE-cCCCcEEEEEEeeccchhHHHHHHHHHHHhccCC-CCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGATRIKIVSEFITRIGTVRH-KNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H-~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
....||.|+||.+|.|. ..+|..||||.=...... -.+.-|.++.+.++| ..|..+..|..+++.-.+|||.+ +-|
T Consensus 19 lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h-pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL-GPs 96 (341)
T KOG1163|consen 19 LVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH-PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL-GPS 96 (341)
T ss_pred EEEeecCCchhheeeeeeccCCceEEEEeecccCCC-cchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc-Ccc
Confidence 77889999999999998 589999999987644332 234455666666665 45666677778888899999987 568
Q ss_pred hhhhhh---cCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC---CceEEcccCccccccccCCC---
Q 005177 528 LSEKIR---TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN---MEPHLAEFGFKYLTQLADGS--- 598 (710)
Q Consensus 528 L~~~l~---~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~---~~~kl~DfGla~~~~~~~~~--- 598 (710)
|+++.. +..+..+.+-++-|+..-++|+|.+ ++|||||||+|.|..-. ..+.++|||+|+......+.
T Consensus 97 LEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HI 173 (341)
T KOG1163|consen 97 LEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHI 173 (341)
T ss_pred HHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchhhhccccccccC
Confidence 888774 3456667788889999999999999 89999999999998743 45789999999865432111
Q ss_pred ------CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCC
Q 005177 599 ------FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAG 643 (710)
Q Consensus 599 ------~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~ 643 (710)
..++++.|+.-....+...+.+-|+=|.|-++....-|..||.+-
T Consensus 174 pyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQgl 224 (341)
T KOG1163|consen 174 PYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGL 224 (341)
T ss_pred ccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCccccc
Confidence 112233333221111223344569999999999999999999843
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.2e-15 Score=154.40 Aligned_cols=223 Identities=16% Similarity=0.127 Sum_probs=136.6
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCC-----------CCceeEEEEEE-c
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRH-----------KNLIRLLGFCY-N 512 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H-----------~niv~l~g~~~-~ 512 (710)
....||.|+++.||.++. .+|+.+|||....... ..+.+.+|.-.+..+.+ .-++++ +... .
T Consensus 16 ~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~-d~~~i~ 94 (288)
T PF14531_consen 16 RGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPL-DLLRIP 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---S-EEEEET
T ss_pred EccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeee-EEEEEc
Confidence 457899999999999996 6799999999875332 35566666544444322 222222 2211 1
Q ss_pred --------C---C-----ceeEEEeecCCCChhhhhhc---------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecC
Q 005177 513 --------R---H-----QAYLLYDYLPNGNLSEKIRT---------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGD 567 (710)
Q Consensus 513 --------~---~-----~~~lv~Ey~~~gsL~~~l~~---------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrD 567 (710)
. . ..+++|+-+. +||.+++.. ......|..+..|+.+.+++||+. +++|+|
T Consensus 95 ~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHgd 170 (288)
T PF14531_consen 95 GKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHGD 170 (288)
T ss_dssp TS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEEST
T ss_pred CCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEecc
Confidence 1 1 2367788774 699887642 123455678889999999999999 999999
Q ss_pred CCCCCeEecCCCceEEcccCccccccccCCCCcccccccCchhhhhc--------cCCccccceeeHHHHHHHHHhCCCC
Q 005177 568 LKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNA--------MKEEMYMDVYGFGEIILEILTNGRL 639 (710)
Q Consensus 568 lk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~e~~~~--------~~~~~~~DVySfGvvl~Elltg~~p 639 (710)
|||+|++++.+|.+.++||+-....+..... ......+++||.... ..++.+.|.|++|+++|.|.+|+.|
T Consensus 171 i~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lP 249 (288)
T PF14531_consen 171 IKPENFLLDQDGGVFLGDFSSLVRAGTRYRC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLP 249 (288)
T ss_dssp -SGGGEEE-TTS-EEE--GGGEEETTEEEEG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-S
T ss_pred cceeeEEEcCCCCEEEcChHHHeecCceeec-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCC
Confidence 9999999999999999999875543322111 111233667775533 2467788999999999999999999
Q ss_pred CCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCC
Q 005177 640 TNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDR 692 (710)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~R 692 (710)
+.......... ..+... . +..+.+.+++...++.+|++|
T Consensus 250 f~~~~~~~~~~------~~f~~C----~----~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 250 FGLSSPEADPE------WDFSRC----R----DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp TCCCGGGSTSG------GGGTTS----S-------HHHHHHHHHHT-SSGGGS
T ss_pred CCCCCcccccc------ccchhc----C----CcCHHHHHHHHHHccCCcccC
Confidence 87332111000 001100 1 223455677888999999988
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.61 E-value=7.7e-16 Score=149.71 Aligned_cols=133 Identities=14% Similarity=0.150 Sum_probs=95.9
Q ss_pred hhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHH-------------------------HHHHHHHHhccCCCC--ce
Q 005177 452 EEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKI-------------------------VSEFITRIGTVRHKN--LI 504 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~-------------------------~~~e~~~l~~l~H~n--iv 504 (710)
+.||+|+||.||+|...+|+.||||.++........ ...|.+.+.++++.. +.
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~ 82 (187)
T cd05119 3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPVP 82 (187)
T ss_pred cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCCC
Confidence 578999999999999888999999998753221110 124455555554432 33
Q ss_pred eEEEEEEcCCceeEEEeecCCCChhhh-hhcCCCHHHHHHHHHHHHHHHHHHhc-CCCCCceecCCCCCCeEecCCCceE
Q 005177 505 RLLGFCYNRHQAYLLYDYLPNGNLSEK-IRTKRDWAAKYKIVLGVARGLCFLHH-DCYPAIPHGDLKASNIVFDENMEPH 582 (710)
Q Consensus 505 ~l~g~~~~~~~~~lv~Ey~~~gsL~~~-l~~~~~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlk~~NiLl~~~~~~k 582 (710)
+.+++ ...++||||+++|.+... +.....-.....++.+++.++.++|. . +|+|||+||+||+++ ++.++
T Consensus 83 ~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~-~~~~~ 154 (187)
T cd05119 83 KPIDL----NRHVLVMEFIGGDGIPAPRLKDVRLLEDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD-DGKVY 154 (187)
T ss_pred ceEec----CCCEEEEEEeCCCCccChhhhhhhhcccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE-CCcEE
Confidence 34432 346899999999654322 22111115567899999999999998 6 999999999999999 89999
Q ss_pred EcccCccccc
Q 005177 583 LAEFGFKYLT 592 (710)
Q Consensus 583 l~DfGla~~~ 592 (710)
++|||.+...
T Consensus 155 liDfg~a~~~ 164 (187)
T cd05119 155 IIDVPQAVEI 164 (187)
T ss_pred EEECcccccc
Confidence 9999987543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.60 E-value=6e-15 Score=137.50 Aligned_cols=134 Identities=15% Similarity=0.071 Sum_probs=115.3
Q ss_pred hhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCC--CCceeEEEEEEcCCceeEEEeecCCCCh
Q 005177 451 CEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRH--KNLIRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 451 ~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H--~niv~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
.+.+|+|.++.||++...+ ..++||....... ...+.+|+..+..++| .++.++++++..++..+++|||++++++
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~ 80 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK-GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETL 80 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeec
Confidence 4678999999999999754 7899999876443 4578889999999987 5899999988888889999999998887
Q ss_pred hhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 529 SEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 529 ~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
... ++.....++.+++++++++|....++++|+|+||+||+++..+.+++.|||.++.
T Consensus 81 ~~~-----~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 81 DEV-----SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ccC-----CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 765 5667788899999999999987556899999999999999989999999998754
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.2e-14 Score=143.24 Aligned_cols=134 Identities=16% Similarity=0.172 Sum_probs=105.1
Q ss_pred hhhhc-CCCCCccEEEEcCCCcEEEEEEeeccc--------------hhHHHHHHHHHHHhccCCCCc--eeEEEEEEcC
Q 005177 451 CEEAA-RPQSAAGCKAVLPTGITVSVKKIEWGA--------------TRIKIVSEFITRIGTVRHKNL--IRLLGFCYNR 513 (710)
Q Consensus 451 ~~~ig-~g~~g~vy~~~~~~g~~vAvK~l~~~~--------------~~~~~~~~e~~~l~~l~H~ni--v~l~g~~~~~ 513 (710)
...+| .|+.|+||++... +..+|||+.+.+. .....+.+|++.+.+++|++| ++.+++...+
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 45787 8999999999875 6789999886422 123457789999999999885 6777775443
Q ss_pred C-c---eeEEEeecCC-CChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCc
Q 005177 514 H-Q---AYLLYDYLPN-GNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 588 (710)
Q Consensus 514 ~-~---~~lv~Ey~~~-gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl 588 (710)
. . .++||||+++ .+|.+++.... . ....+.+++.++.+||+. +|+||||||.|||++.++.++|+|||.
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~~-l--~~~~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~LIDfg~ 188 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEAP-L--SEEQWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWLIDFDR 188 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcCC-C--CHHHHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEEEECCC
Confidence 2 2 3599999997 68988886521 1 123467899999999999 999999999999999988999999998
Q ss_pred ccc
Q 005177 589 KYL 591 (710)
Q Consensus 589 a~~ 591 (710)
++.
T Consensus 189 ~~~ 191 (239)
T PRK01723 189 GEL 191 (239)
T ss_pred ccc
Confidence 765
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.2e-15 Score=157.48 Aligned_cols=166 Identities=18% Similarity=0.257 Sum_probs=121.4
Q ss_pred ceeEEEeecCCCChhhhhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcc
Q 005177 515 QAYLLYDYLPNGNLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK 589 (710)
Q Consensus 515 ~~~lv~Ey~~~gsL~~~l~~-----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla 589 (710)
..|+.|++|..++|.+||.. ..+|.....++.|++.|++| + +.+|||+||.||....+..+||.|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhhe
Confidence 57899999999999999964 45788889999999999999 4 8899999999999999999999999986
Q ss_pred ccccccC--------CCCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccccc
Q 005177 590 YLTQLAD--------GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYN 660 (710)
Q Consensus 590 ~~~~~~~--------~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 660 (710)
.-..... .....++.||+.||-+.+..++.|+||||+|+|++|+++ -..++. ....+.++.+
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e---------r~~t~~d~r~ 474 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE---------RIATLTDIRD 474 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH---------HHHhhhhhhc
Confidence 5433221 111225778999999999999999999999999999988 221111 0011122222
Q ss_pred ccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 005177 661 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEA 698 (710)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~ev 698 (710)
.. + ++......+.-..++.+.+...|.+||++.++
T Consensus 475 g~-i--p~~~~~d~p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 475 GI-I--PPEFLQDYPEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred CC-C--ChHHhhcCcHHHHHHHHhcCCCcccCchHHHH
Confidence 22 1 11111222334567788999999999955444
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.3e-14 Score=164.44 Aligned_cols=188 Identities=18% Similarity=0.177 Sum_probs=137.1
Q ss_pred cCCchhhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccC---CCCceeEEEEEEcCCceeEEEe
Q 005177 445 SFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVR---HKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~---H~niv~l~g~~~~~~~~~lv~E 521 (710)
.|. +..++|+|+||.||+|...+|+.||+|.=+-...-.-.+. .+++.|++ -+-|..+..++...+.-++|+|
T Consensus 699 ~~~--I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~--~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~e 774 (974)
T KOG1166|consen 699 KFC--ISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYIC--LQVMERLKPQMLPSIMHISSAHVFQNASVLVSE 774 (974)
T ss_pred eEE--EEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeeh--HHHHHhhchhhhcchHHHHHHHccCCcceeeee
Confidence 355 7789999999999999988899999998664221100000 12222232 2334445555556778899999
Q ss_pred ecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC-------CCceEEcccCccccc
Q 005177 522 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-------NMEPHLAEFGFKYLT 592 (710)
Q Consensus 522 y~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~-------~~~~kl~DfGla~~~ 592 (710)
|.+.|+|.+++.. .++|.-.+.++.|+++-++.||.. +|||+||||.|.||.. ....+|+|||.+--+
T Consensus 775 y~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm 851 (974)
T KOG1166|consen 775 YSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDM 851 (974)
T ss_pred ccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEEEecccceee
Confidence 9999999999975 568999999999999999999999 9999999999999943 245899999987433
Q ss_pred ccc--CCCCcc--cccccCchhhhhccCCccccceeeHHHHHHHHHhCCCC
Q 005177 593 QLA--DGSFPA--KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRL 639 (710)
Q Consensus 593 ~~~--~~~~~~--~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p 639 (710)
..- ...+.+ .+....+.|...+.+.+..+|.|.+.-+++-|+.|+..
T Consensus 852 ~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 852 KLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred eEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 211 111111 11112244777778888999999999999999999754
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.4e-14 Score=139.28 Aligned_cols=191 Identities=11% Similarity=0.058 Sum_probs=139.6
Q ss_pred cCCchhhhhhcCCCCCccEEEE-cCCCcEEEEEEeeccchhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEEee
Q 005177 445 SFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
.|. ....||+|.||..+.|+ +-++.+||||.=.... ..-.+..|.+..+.+ ..+.|-..+-|-.++-.-.||+|.
T Consensus 29 hyr--VGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS-~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidL 105 (449)
T KOG1165|consen 29 HYR--VGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS-EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDL 105 (449)
T ss_pred cce--eccccccCcceeeecccccccCceEEEEeccccC-CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhh
Confidence 455 78899999999999998 6789999999854322 222333444443333 468888877777777788899998
Q ss_pred cCCCChhhhh---hcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC-----ceEEcccCccccccc
Q 005177 523 LPNGNLSEKI---RTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM-----EPHLAEFGFKYLTQL 594 (710)
Q Consensus 523 ~~~gsL~~~l---~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~-----~~kl~DfGla~~~~~ 594 (710)
+ |-||+|+. .+..+..+..-||.|+..-++|+|++ ..|.|||||+|.||..-+ .+.+.|||+|+....
T Consensus 106 L-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrD 181 (449)
T KOG1165|consen 106 L-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRD 181 (449)
T ss_pred h-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhhhcC
Confidence 7 45777665 34667888899999999999999999 999999999999997543 478999999987643
Q ss_pred cCCC---------CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCC
Q 005177 595 ADGS---------FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNA 642 (710)
Q Consensus 595 ~~~~---------~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~ 642 (710)
..+. .-++++.|+.-....+...+.+-|.=|+|=|++..+-|..||.+
T Consensus 182 p~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQG 238 (449)
T KOG1165|consen 182 PKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQG 238 (449)
T ss_pred ccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccc
Confidence 2211 11123323322222233455667999999999999999999984
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.1e-13 Score=149.20 Aligned_cols=145 Identities=17% Similarity=0.138 Sum_probs=101.3
Q ss_pred CCchhhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchh-----------------------------------------
Q 005177 446 FNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATR----------------------------------------- 484 (710)
Q Consensus 446 ~~~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~----------------------------------------- 484 (710)
|...+.+.+|.|++|.||+|++.+|+.||||+.+.+...
T Consensus 117 F~~fd~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ 196 (437)
T TIGR01982 117 FAEFEEKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRR 196 (437)
T ss_pred HhhCCCcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHH
Confidence 333345789999999999999999999999998653110
Q ss_pred HHHHHHHHHHHhcc----CCCCceeEEEEEEc-CCceeEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHH-HHHHHhcC
Q 005177 485 IKIVSEFITRIGTV----RHKNLIRLLGFCYN-RHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVAR-GLCFLHHD 558 (710)
Q Consensus 485 ~~~~~~e~~~l~~l----~H~niv~l~g~~~~-~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~-gL~yLH~~ 558 (710)
.-.|..|.+.+.++ +|.+-|..-.+|.+ ....+|||||++|++|.++......-..+.+++..+++ .+..+|..
T Consensus 197 Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 197 ELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLRD 276 (437)
T ss_pred HHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhC
Confidence 00133444444444 23333333333332 34679999999999999876431100134567776666 46788887
Q ss_pred CCCCceecCCCCCCeEecCCCceEEcccCcccccc
Q 005177 559 CYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 559 ~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~ 593 (710)
+++|+|+||.||+++.++.+++.|||++....
T Consensus 277 ---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 277 ---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred ---CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 99999999999999999999999999986543
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.43 E-value=9.4e-15 Score=153.92 Aligned_cols=191 Identities=30% Similarity=0.535 Sum_probs=134.5
Q ss_pred EECCCCcCcccCCccc--cCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCC
Q 005177 106 LNLSHNSFSGQFPVEI--FNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 183 (710)
Q Consensus 106 L~Ls~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n 183 (710)
|.|++-.+. .+|-.- ..++--...||+.|++. .+|..+..+-.|+.|.|++|.+. .+|..+.+|..|++|||+.|
T Consensus 55 l~Ls~rrlk-~fpr~a~~~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~N 131 (722)
T KOG0532|consen 55 LLLSGRRLK-EFPRGAASYDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSN 131 (722)
T ss_pred cccccchhh-cCCCccccccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccc
Confidence 444444443 333221 23444566777888876 57777777777888888888776 67778888888888888888
Q ss_pred CCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCch
Q 005177 184 YFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPK 263 (710)
Q Consensus 184 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~ 263 (710)
+++ .+|..++.|+ |+.|-+++|+++ .+|..++.+.+|.+|+.++|.+. .+|..++.+.+|+.|.+..|++. .+|.
T Consensus 132 qlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~ 206 (722)
T KOG0532|consen 132 QLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPE 206 (722)
T ss_pred hhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCH
Confidence 887 5677777665 788888888875 67777777777888888877776 56777777888888888877776 4555
Q ss_pred hccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCC
Q 005177 264 ELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLS 306 (710)
Q Consensus 264 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 306 (710)
.+..+ .|..||++.|+++ .+|..|.+|+.|++|-|.+|.+.
T Consensus 207 El~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 207 ELCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred HHhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC
Confidence 55544 3667777777765 56666777777777777777666
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.5e-14 Score=152.41 Aligned_cols=195 Identities=27% Similarity=0.445 Sum_probs=169.4
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
++--...||+.|++. .+|.++..+..|+.|.|.+|.+. .+|..+.+|..|.+|||+.|+++ .+|..+..|+ |+.|-
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli 149 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLI 149 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEE
Confidence 556678999999997 89999999999999999999997 78999999999999999999998 6888888886 99999
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCc
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g 259 (710)
+++|+++ .+|..++.+..|..||.+.|.+. .+|..++.+.+|+.|.+..|++. .+|..+..| .|..||+|.|+++
T Consensus 150 ~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis- 224 (722)
T KOG0532|consen 150 VSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS- 224 (722)
T ss_pred EecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-
Confidence 9999998 78999999999999999999986 78999999999999999999987 677778855 5899999999998
Q ss_pred cCchhccCCCCCcEEEccccccCCCCCccccC---CCCCCEEEccCCC
Q 005177 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSR---VTTLKSLDLSDNR 304 (710)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~---l~~L~~L~Ls~N~ 304 (710)
.+|-.|.+|+.|++|.|.+|.++ ..|..+.- ..-.++|+..-++
T Consensus 225 ~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 225 YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred ecchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhcc
Confidence 89999999999999999999998 45555432 2224566665553
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=9.2e-13 Score=150.73 Aligned_cols=110 Identities=29% Similarity=0.494 Sum_probs=101.8
Q ss_pred CCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEec
Q 005177 126 SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLA 205 (710)
Q Consensus 126 ~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 205 (710)
.++.|+|++|.++|.+|..++.+++|+.|+|++|.++|.+|..++.+++|+.|+|++|+++|.+|+.++++++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCCccccccc-ccccccccccccccc
Q 005177 206 GNLLNDQIPAELGML-KTVTHMEIGYNFYQG 235 (710)
Q Consensus 206 ~N~l~~~~p~~l~~l-~~L~~L~l~~n~~~g 235 (710)
+|.++|.+|..++.+ .++..+++..|....
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc 529 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLC 529 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCcccc
Confidence 999999999998764 466778888876543
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.6e-13 Score=152.89 Aligned_cols=204 Identities=15% Similarity=0.113 Sum_probs=130.5
Q ss_pred cCCchhhhhhcCCCCCccEEEEcC-CCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeec
Q 005177 445 SFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
+|+ ..+.+..|+||.||...+. +.+..|+ ++.+.. .+.+- ++.....|.+|
T Consensus 84 df~--~IklisngAygavylvrh~~trqrfa~-kiNkq~----lilRn--ilt~a~npfvv------------------- 135 (1205)
T KOG0606|consen 84 DFN--TIKLISNGAYGAVYLVRHKETRQRFAM-KINKQN----LILRN--ILTFAGNPFVV------------------- 135 (1205)
T ss_pred ccc--eeEeeccCCCCceeeeeccccccchhh-cccccc----hhhhc--cccccCCccee-------------------
Confidence 466 7788999999999999863 4667888 444221 11110 33333344444
Q ss_pred CCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccc---------
Q 005177 524 PNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL--------- 594 (710)
Q Consensus 524 ~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~--------- 594 (710)
||=...++.....+ .+++.+++|+|+- +|+|||+||+|.++..-|+.|+.|||+.++---
T Consensus 136 --gDc~tllk~~g~lP------vdmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg 204 (1205)
T KOG0606|consen 136 --GDCATLLKNIGPLP------VDMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEG 204 (1205)
T ss_pred --chhhhhcccCCCCc------chhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhc
Confidence 44444444311111 1227899999998 999999999999999999999999999764210
Q ss_pred --------cCCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCC
Q 005177 595 --------ADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS 666 (710)
Q Consensus 595 --------~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (710)
-......+++.|.+||+...+.|+..+|.|++|+|+||-+.|+.||+++...+ .+.+++......
T Consensus 205 ~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpee------lfg~visd~i~w- 277 (1205)
T KOG0606|consen 205 HIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE------LFGQVISDDIEW- 277 (1205)
T ss_pred chHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHH------HHhhhhhhhccc-
Confidence 00111235667888899888889999999999999999999999998663211 111111111000
Q ss_pred CcchHHHHHHHHHHHhhcCCCCCCCCCC
Q 005177 667 SSSLQDEIKLVLDVALLCTRSTPSDRPS 694 (710)
Q Consensus 667 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPs 694 (710)
++.......++.+++.+.++.+|..|--
T Consensus 278 pE~dea~p~Ea~dli~~LL~qnp~~Rlg 305 (1205)
T KOG0606|consen 278 PEEDEALPPEAQDLIEQLLRQNPLCRLG 305 (1205)
T ss_pred cccCcCCCHHHHHHHHHHHHhChHhhcc
Confidence 1111111234556666777788888853
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.2e-12 Score=129.65 Aligned_cols=194 Identities=19% Similarity=0.271 Sum_probs=126.1
Q ss_pred HhccCCCCceeEEEEEEcC-----CceeEEEeecCCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCc
Q 005177 495 IGTVRHKNLIRLLGFCYNR-----HQAYLLYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAI 563 (710)
Q Consensus 495 l~~l~H~niv~l~g~~~~~-----~~~~lv~Ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~i 563 (710)
|-.+-|.|||+++.|+.+. .+..++.|||..|++.++|++ .+....-.+++.||..||.|||+ |.|+|
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~Ppi 199 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CDPPI 199 (458)
T ss_pred HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cCCcc
Confidence 4456799999999998653 357899999999999999976 12222335889999999999998 68999
Q ss_pred eecCCCCCCeEecCCCceEEcccCccccc------cccCCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCC
Q 005177 564 PHGDLKASNIVFDENMEPHLAEFGFKYLT------QLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNG 637 (710)
Q Consensus 564 iHrDlk~~NiLl~~~~~~kl~DfGla~~~------~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~ 637 (710)
+|+++...-|.+..++-+|+.---....- .......-.+..++..+++......+..+|||+||...+||..+.
T Consensus 200 ihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailE 279 (458)
T KOG1266|consen 200 IHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILE 279 (458)
T ss_pred ccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHhe
Confidence 99999999999998888887532211100 000011111233444555555556677899999999999999886
Q ss_pred CCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 638 RLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 638 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.-...+..-. .......... ...... .-.+.+.+|++..|..||+|++.+.+
T Consensus 280 iq~tnseS~~--~~ee~ia~~i----~~len~------lqr~~i~kcl~~eP~~rp~ar~llfH 331 (458)
T KOG1266|consen 280 IQSTNSESKV--EVEENIANVI----IGLENG------LQRGSITKCLEGEPNGRPDARLLLFH 331 (458)
T ss_pred eccCCCccee--ehhhhhhhhe----eeccCc------cccCcCcccccCCCCCCcchhhhhcC
Confidence 4322111100 0000001110 000000 11245668999999999999998754
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.1e-12 Score=141.03 Aligned_cols=197 Identities=32% Similarity=0.514 Sum_probs=100.7
Q ss_pred EEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCC-CCCEEECCCCCCCcCCchhccCCCCCCEEEccCC
Q 005177 105 DLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLR-NLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 183 (710)
Q Consensus 105 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~-~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n 183 (710)
.++++.|.+... +..+..++.++.|++.+|.++ .+|.....+. +|+.|++++|++. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~-~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSN-ISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccC-chhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 355555555322 223444566666666666665 3444455553 6666666666665 44455666666666666666
Q ss_pred CCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCch
Q 005177 184 YFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPK 263 (710)
Q Consensus 184 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~ 263 (710)
+++ .+|...+.+++|+.|++++|++. .+|..++.+..|+.+.++.|. .. ..+.
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~------------------------~~-~~~~ 226 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNS------------------------II-ELLS 226 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCc------------------------ce-ecch
Confidence 665 34444445666666666666654 344444444444445444442 11 2233
Q ss_pred hccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCC
Q 005177 264 ELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVP 334 (710)
Q Consensus 264 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p 334 (710)
.+.++.++..+.+.+|++.. ++..+..+++++.|++++|.++.. +. ++.+.+|+.|++++|.++...|
T Consensus 227 ~~~~~~~l~~l~l~~n~~~~-~~~~~~~l~~l~~L~~s~n~i~~i-~~-~~~~~~l~~L~~s~n~~~~~~~ 294 (394)
T COG4886 227 SLSNLKNLSGLELSNNKLED-LPESIGNLSNLETLDLSNNQISSI-SS-LGSLTNLRELDLSGNSLSNALP 294 (394)
T ss_pred hhhhcccccccccCCceeee-ccchhccccccceecccccccccc-cc-ccccCccCEEeccCccccccch
Confidence 34444444444444444432 133344444555555555555422 22 4555555555555555554333
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.30 E-value=4.5e-13 Score=151.16 Aligned_cols=242 Identities=16% Similarity=0.158 Sum_probs=168.5
Q ss_pred hhhhhcCCCCCccEEEEc--CCCcEEEEEEeeccchh---HHHHHHHHHHHhccC-CCCceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVL--PTGITVSVKKIEWGATR---IKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~--~~g~~vAvK~l~~~~~~---~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
....+|+|.|+.|-.... .....+|+|.+...... .+....|..+=..+. |+|++.+++...+.+..+++.||.
T Consensus 24 ~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s 103 (601)
T KOG0590|consen 24 LSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYS 103 (601)
T ss_pred ccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccccCcc
Confidence 455689999999877764 33456777777654322 233344555555555 999999999999999999999999
Q ss_pred CCCChhhhh-hc---CCCHHHHHHHHHHHHHHHHHHh-cCCCCCceecCCCCCCeEecCCC-ceEEcccCccccccc-cC
Q 005177 524 PNGNLSEKI-RT---KRDWAAKYKIVLGVARGLCFLH-HDCYPAIPHGDLKASNIVFDENM-EPHLAEFGFKYLTQL-AD 596 (710)
Q Consensus 524 ~~gsL~~~l-~~---~~~~~~~~~i~~~ia~gL~yLH-~~~~~~iiHrDlk~~NiLl~~~~-~~kl~DfGla~~~~~-~~ 596 (710)
.+|++.+.+ +. ..+-.....+..|+..|+.|+| .. ++.|||+||+|.+++..+ ..|++|||+|..... .+
T Consensus 104 ~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g 180 (601)
T KOG0590|consen 104 DGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNG 180 (601)
T ss_pred cccccccccccCCccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhccccccCC
Confidence 999999998 54 2345567788999999999999 66 999999999999999999 999999999876543 21
Q ss_pred CCC----ccc-ccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcch
Q 005177 597 GSF----PAK-IAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 670 (710)
Q Consensus 597 ~~~----~~~-~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (710)
... ..+ ..-|+++|.... .......|+||.|+++.-+++|..|+....... +....+...- . ......+
T Consensus 181 ~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~-~~~~~~~~~~---~-~~~~~~~ 255 (601)
T KOG0590|consen 181 AERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD-GRYSSWKSNK---G-RFTQLPW 255 (601)
T ss_pred cceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc-ccceeecccc---c-ccccCcc
Confidence 111 112 333556666554 344667899999999999999999987332211 1111111111 0 0001112
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 005177 671 QDEIKLVLDVALLCTRSTPSDRPSMEEAL 699 (710)
Q Consensus 671 ~~~~~~~~~l~~~Cl~~~p~~RPs~~evl 699 (710)
........++..+++..+|+.|.+.+++-
T Consensus 256 ~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 256 NSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred ccCChhhhhcccccccCCchhcccccccc
Confidence 23334556777788889999999987754
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.3e-11 Score=117.71 Aligned_cols=130 Identities=12% Similarity=0.080 Sum_probs=96.6
Q ss_pred hhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCcee-EEEEEEcCCceeEEEeecCCCChhh
Q 005177 452 EEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIR-LLGFCYNRHQAYLLYDYLPNGNLSE 530 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~-l~g~~~~~~~~~lv~Ey~~~gsL~~ 530 (710)
+.++.|.++.||++... |..|++|...........+..|++.+..+.+.++++ ++++. .+..++||||+++.++.+
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~~ 80 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELLT 80 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcccc
Confidence 45788999999999864 778999998654322334677888888887666554 44433 334589999999988765
Q ss_pred hhhcCCCHHHHHHHHHHHHHHHHHHhcCC--CCCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 531 KIRTKRDWAAKYKIVLGVARGLCFLHHDC--YPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 531 ~l~~~~~~~~~~~i~~~ia~gL~yLH~~~--~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
. . .....++.+++++++.||+.. .+.++|+|+||.||+++ ++.+++.|||.+..
T Consensus 81 ~--~----~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 81 E--D----FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred c--c----ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 3 0 112345678999999999873 22369999999999999 66899999998653
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.26 E-value=5.2e-12 Score=137.96 Aligned_cols=178 Identities=30% Similarity=0.472 Sum_probs=129.0
Q ss_pred CCCCcEEECCCCcCcccCCccccCCC-CCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLT-SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 178 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L 178 (710)
++.++.|++.+|.++ .+|+....++ +|+.|++++|.+. .+|..++.+++|+.|++++|+++ .+|...+.++.|+.|
T Consensus 115 ~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L 191 (394)
T COG4886 115 LTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNL 191 (394)
T ss_pred ccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhhe
Confidence 578999999999998 6777788885 9999999999998 56677999999999999999999 677777799999999
Q ss_pred EccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCC
Q 005177 179 NLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS 258 (710)
Q Consensus 179 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~ 258 (710)
++++|+++ .+|.....+..|++|.+++|... ..+..+.++.++..+.+..|.+.. ++..++.++++++|++++|.++
T Consensus 192 ~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~-~~~~~~~l~~l~~L~~s~n~i~ 268 (394)
T COG4886 192 DLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED-LPESIGNLSNLETLDLSNNQIS 268 (394)
T ss_pred eccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee-ccchhccccccceecccccccc
Confidence 99999998 67877777778999999999632 455566666666666655554432 2334444455555555555544
Q ss_pred ccCchhccCCCCCcEEEccccccCCCC
Q 005177 259 GSIPKELSNLTKLESLFLFRNQLAGQV 285 (710)
Q Consensus 259 g~~p~~l~~l~~L~~L~L~~n~l~~~~ 285 (710)
.. +. ++.+.+++.|++++|.+....
T Consensus 269 ~i-~~-~~~~~~l~~L~~s~n~~~~~~ 293 (394)
T COG4886 269 SI-SS-LGSLTNLRELDLSGNSLSNAL 293 (394)
T ss_pred cc-cc-ccccCccCEEeccCccccccc
Confidence 22 22 444444555555444444333
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.24 E-value=8e-12 Score=138.21 Aligned_cols=144 Identities=15% Similarity=0.127 Sum_probs=92.7
Q ss_pred hhhhhcCCchhhhhhcCCCCCccEEEEcCC-CcEEEEEEeeccchh----------------------------------
Q 005177 440 NDVLRSFNSTECEEAARPQSAAGCKAVLPT-GITVSVKKIEWGATR---------------------------------- 484 (710)
Q Consensus 440 ~~~~~~~~~~~~~~ig~g~~g~vy~~~~~~-g~~vAvK~l~~~~~~---------------------------------- 484 (710)
+++...|+ . +.+|+|++|.||+|++.+ |+.||||+++.+...
T Consensus 116 ~~~F~~fd--~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e 192 (537)
T PRK04750 116 EEWFDDFD--I-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAE 192 (537)
T ss_pred HHHHHhcC--h-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHH
Confidence 44455565 4 789999999999999977 999999999743110
Q ss_pred -HH------HHHHHHHHHhccC----CCCceeEEEEEEc-CCceeEEEeecCCCChhhh--hhc-CCCHHHHHHHHHHHH
Q 005177 485 -IK------IVSEFITRIGTVR----HKNLIRLLGFCYN-RHQAYLLYDYLPNGNLSEK--IRT-KRDWAAKYKIVLGVA 549 (710)
Q Consensus 485 -~~------~~~~e~~~l~~l~----H~niv~l~g~~~~-~~~~~lv~Ey~~~gsL~~~--l~~-~~~~~~~~~i~~~ia 549 (710)
.+ ++.+|.+.+.+++ +.+.|.+=.++.+ ....+|||||++|+.+.++ +.. ..+ +..++...+
T Consensus 193 ~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d---~~~la~~~v 269 (537)
T PRK04750 193 FEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTD---MKLLAERGV 269 (537)
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCC---HHHHHHHHH
Confidence 01 1333443343332 4444444444433 4567899999999999874 222 112 122222221
Q ss_pred HH-HHHHhcCCCCCceecCCCCCCeEecCCC----ceEEcccCccccc
Q 005177 550 RG-LCFLHHDCYPAIPHGDLKASNIVFDENM----EPHLAEFGFKYLT 592 (710)
Q Consensus 550 ~g-L~yLH~~~~~~iiHrDlk~~NiLl~~~~----~~kl~DfGla~~~ 592 (710)
+. +.-++.. +++|+|+||.||+++.++ .+++.|||+....
T Consensus 270 ~~~~~Qif~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l 314 (537)
T PRK04750 270 EVFFTQVFRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL 314 (537)
T ss_pred HHHHHHHHhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence 11 1122334 999999999999999888 8999999987644
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.09 E-value=5.3e-10 Score=111.59 Aligned_cols=141 Identities=14% Similarity=0.204 Sum_probs=110.4
Q ss_pred hhhhcCCCCCccEEEEcCCCcEEEEEEeeccch--hHHHHHHHHHHHhccCCC--CceeEEEEEEcC---CceeEEEeec
Q 005177 451 CEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHK--NLIRLLGFCYNR---HQAYLLYDYL 523 (710)
Q Consensus 451 ~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~--niv~l~g~~~~~---~~~~lv~Ey~ 523 (710)
.+.++.|..+.+|++...+|..+++|....... ....+..|.++++.+++. ++.+++++.... +..++||||+
T Consensus 3 ~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 3 VRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred ceecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 356789999999999987778999999875432 345678889999888764 456677777654 2668999999
Q ss_pred CCCChhhhhh-cCCCHHHHHHHHHHHHHHHHHHhcCC-------------------------------------------
Q 005177 524 PNGNLSEKIR-TKRDWAAKYKIVLGVARGLCFLHHDC------------------------------------------- 559 (710)
Q Consensus 524 ~~gsL~~~l~-~~~~~~~~~~i~~~ia~gL~yLH~~~------------------------------------------- 559 (710)
+++++.+.+. ...+..++..++.++++++.+||+..
T Consensus 83 ~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (223)
T cd05154 83 DGRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLR 162 (223)
T ss_pred CCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHH
Confidence 9988887664 45677788888999999999998531
Q ss_pred ----------CCCceecCCCCCCeEecC--CCceEEcccCcccc
Q 005177 560 ----------YPAIPHGDLKASNIVFDE--NMEPHLAEFGFKYL 591 (710)
Q Consensus 560 ----------~~~iiHrDlk~~NiLl~~--~~~~kl~DfGla~~ 591 (710)
.+.++|+|+++.||+++. ++.+.|.||+.+..
T Consensus 163 ~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 163 WLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 145799999999999998 56688999997643
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.2e-10 Score=136.19 Aligned_cols=273 Identities=22% Similarity=0.232 Sum_probs=153.7
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCC--CCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNN--FSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKV 177 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~--l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~ 177 (710)
....+++.+-+|.+. .++... ..++|++|-+..|. +....++.|..++.|++|||++|.--+.+|.++++|.+||+
T Consensus 522 ~~~~rr~s~~~~~~~-~~~~~~-~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lry 599 (889)
T KOG4658|consen 522 WNSVRRMSLMNNKIE-HIAGSS-ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRY 599 (889)
T ss_pred hhheeEEEEeccchh-hccCCC-CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhc
Confidence 356777888887775 334332 34478888888886 44333444677888888888887777788888888888888
Q ss_pred EEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccc--cccCCccccCCCccchhccccc
Q 005177 178 LNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFY--QGNIPWQLGNMSEVQYLDIAGA 255 (710)
Q Consensus 178 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~--~g~~p~~l~~l~~L~~L~ls~n 255 (710)
|+|++..++ .+|..+++|.+|.+|++..+.-...+|.....|++|++|.+..... .+..-..+.++..|+.+.....
T Consensus 600 L~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~ 678 (889)
T KOG4658|consen 600 LDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITIS 678 (889)
T ss_pred ccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecc
Confidence 888888887 6888888888888888887776656666666788888887755431 1122223344555555544332
Q ss_pred cCCccCchhccCCCCCc----EEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCC------CCEEEcc
Q 005177 256 NLSGSIPKELSNLTKLE----SLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKN------LRLLSLM 325 (710)
Q Consensus 256 ~l~g~~p~~l~~l~~L~----~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~------L~~L~Ls 325 (710)
.. .+-..+..+++|. .+.+..+.. ...+..+..+.+|+.|.+.++.++.....+...... +..+...
T Consensus 679 s~--~~~e~l~~~~~L~~~~~~l~~~~~~~-~~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~ 755 (889)
T KOG4658|consen 679 SV--LLLEDLLGMTRLRSLLQSLSIEGCSK-RTLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSIL 755 (889)
T ss_pred hh--HhHhhhhhhHHHHHHhHhhhhccccc-ceeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhh
Confidence 22 1111222233332 222222111 123344566677777777777665332222221111 1111111
Q ss_pred cccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCc
Q 005177 326 YNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNG 379 (710)
Q Consensus 326 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g 379 (710)
+.... ..+.+....|+|+.|.+..+.....+.+....+..+..+-+..+.+.+
T Consensus 756 ~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~ 808 (889)
T KOG4658|consen 756 NCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEG 808 (889)
T ss_pred ccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEeccccccc
Confidence 11111 123334455677777777666555544444444444444455555544
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.4e-09 Score=118.51 Aligned_cols=165 Identities=19% Similarity=0.252 Sum_probs=119.7
Q ss_pred EcCCCcEEEEEEeeccchh-HHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChhhhhhcCCCHHHHHHH
Q 005177 466 VLPTGITVSVKKIEWGATR-IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKI 544 (710)
Q Consensus 466 ~~~~g~~vAvK~l~~~~~~-~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~~i 544 (710)
+..+|.+|.|...+..... .....+.++.|+.+|||||+++++.+..++..|+|+|-+. -|..++.+.. -....-.
T Consensus 33 ~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~-~~~v~~G 109 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG-KEEVCLG 109 (690)
T ss_pred eeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH-HHHHHHH
Confidence 3468899999999875542 3446677889999999999999999999999999999875 4666666432 3334456
Q ss_pred HHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCcc--cccccCchhhhhccCCccccc
Q 005177 545 VLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPA--KIAWTESGEFYNAMKEEMYMD 622 (710)
Q Consensus 545 ~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~--~~~~~~~~e~~~~~~~~~~~D 622 (710)
+.||+.||.|||+.| +++|.+|.-+-|++++.|+-||++|-++............ ...-+..|+.. .+-+...|
T Consensus 110 l~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~--~~s~~s~D 185 (690)
T KOG1243|consen 110 LFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEI--DPSEWSID 185 (690)
T ss_pred HHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhc--Cccccchh
Confidence 789999999999887 8999999999999999999999999876443321110000 00001111110 11224569
Q ss_pred eeeHHHHHHHHHhCC
Q 005177 623 VYGFGEIILEILTNG 637 (710)
Q Consensus 623 VySfGvvl~Elltg~ 637 (710)
.|-|||+++|++.|.
T Consensus 186 ~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 186 SWGLGCLIEELFNGS 200 (690)
T ss_pred hhhHHHHHHHHhCcc
Confidence 999999999999983
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.9e-10 Score=124.21 Aligned_cols=244 Identities=14% Similarity=0.117 Sum_probs=161.8
Q ss_pred cCCchhhhhhcCCCCCccEEEEc--CCCcEEEEEEeeccchh---HHHHHHHHHHHhc-cCCCCceeEEEEEEcCCceeE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL--PTGITVSVKKIEWGATR---IKIVSEFITRIGT-VRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~--~~g~~vAvK~l~~~~~~---~~~~~~e~~~l~~-l~H~niv~l~g~~~~~~~~~l 518 (710)
.|. ....||.+.|+.||+... .++..+|+|.+..+... ...-..|+.+... ..|.+++++...+...+..|+
T Consensus 266 df~--~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~i 343 (524)
T KOG0601|consen 266 DFG--LVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYI 343 (524)
T ss_pred Ccc--eeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccC
Confidence 355 778899999999998763 56789999998764321 1122333433332 349999998887777778889
Q ss_pred EEeecCCCChhhhh--hcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC-CceEEcccCcccccccc
Q 005177 519 LYDYLPNGNLSEKI--RTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-MEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 519 v~Ey~~~gsL~~~l--~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~-~~~kl~DfGla~~~~~~ 595 (710)
=-|||++++....+ ...++...++++..|++.|+.|+|+. .++|+|+||+||++..+ +..+++|||++.-....
T Consensus 344 p~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~ 420 (524)
T KOG0601|consen 344 PLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFS 420 (524)
T ss_pred chhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhcccccccccccee
Confidence 99999999876554 33557777889999999999999987 99999999999999986 88999999987532211
Q ss_pred CCCCcccccccC-chhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 596 DGSFPAKIAWTE-SGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 596 ~~~~~~~~~~~~-~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
..........+. .+.......+-.+.|+||||.-+.|.+++..-...+. .|.. +.... ....+.. .
T Consensus 421 ~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~---~~~~------i~~~~-~p~~~~~---~ 487 (524)
T KOG0601|consen 421 SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV---QSLT------IRSGD-TPNLPGL---K 487 (524)
T ss_pred cccccccccccccchhhccccccccccccccccccccccccCcccCcccc---ccee------eeccc-ccCCCch---H
Confidence 111111112232 3333334456778999999999999999764332221 1111 00110 1111111 1
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
.....++......++..||.+.+...+.+-.+
T Consensus 488 ~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 488 LQLQVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred HhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence 33344555677889999999988766554443
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.6e-09 Score=101.22 Aligned_cols=131 Identities=10% Similarity=0.099 Sum_probs=93.2
Q ss_pred hhhcCCCCCccEEEEcCC-------CcEEEEEEeeccch-----------------------hHHHH----HHHHHHHhc
Q 005177 452 EEAARPQSAAGCKAVLPT-------GITVSVKKIEWGAT-----------------------RIKIV----SEFITRIGT 497 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~~~-------g~~vAvK~l~~~~~-----------------------~~~~~----~~e~~~l~~ 497 (710)
..||.|.-+.||.|.-.+ +..+|||..+.+.. ..+.+ .+|.+.|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468899999999998653 57999998764210 01223 378888887
Q ss_pred cCC--CCceeEEEEEEcCCceeEEEeecCCCChhh-hhhc-CCCHHHHHHHHHHHHHHHHHH-hcCCCCCceecCCCCCC
Q 005177 498 VRH--KNLIRLLGFCYNRHQAYLLYDYLPNGNLSE-KIRT-KRDWAAKYKIVLGVARGLCFL-HHDCYPAIPHGDLKASN 572 (710)
Q Consensus 498 l~H--~niv~l~g~~~~~~~~~lv~Ey~~~gsL~~-~l~~-~~~~~~~~~i~~~ia~gL~yL-H~~~~~~iiHrDlk~~N 572 (710)
++- -++-+.+++ ..-++||||+.++.+.. .++. ..+..+...+..+++.+|.++ |.. +|+|+|+++.|
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGDLs~~N 155 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHADLSEYN 155 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHH
Confidence 753 345555554 45689999997654422 2332 223344567788999999999 666 99999999999
Q ss_pred eEecCCCceEEcccCccc
Q 005177 573 IVFDENMEPHLAEFGFKY 590 (710)
Q Consensus 573 iLl~~~~~~kl~DfGla~ 590 (710)
|+++ ++.+.++|||-+-
T Consensus 156 IL~~-~~~v~iIDF~qav 172 (197)
T cd05146 156 MLWH-DGKVWFIDVSQSV 172 (197)
T ss_pred EEEE-CCcEEEEECCCce
Confidence 9997 4689999999653
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.97 E-value=5e-10 Score=131.12 Aligned_cols=268 Identities=23% Similarity=0.219 Sum_probs=170.9
Q ss_pred CCCCcEEECCCCcC-cccCCcc-ccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCE
Q 005177 100 FNELVDLNLSHNSF-SGQFPVE-IFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKV 177 (710)
Q Consensus 100 l~~L~~L~Ls~N~l-~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~ 177 (710)
.++|++|-+..|.- ...++.. |..++.|++||||+|.=-+.+|..+++|-+|++|+|++..++ .+|..+.+|..|.+
T Consensus 544 ~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~ 622 (889)
T KOG4658|consen 544 NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIY 622 (889)
T ss_pred CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhhe
Confidence 34688999999862 2355555 557999999999998877889999999999999999999998 79999999999999
Q ss_pred EEccCCCCCCCCCcccCCCCCCCeEEecCCc--CCCCCcccccccccccccccccccccccCCccccCCCccc----hhc
Q 005177 178 LNLAGSYFSGPIPSQFGSFKSLEFLHLAGNL--LNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQ----YLD 251 (710)
Q Consensus 178 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~--l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~----~L~ 251 (710)
|++..+.....+|.....|++|++|.+.... .+...-.++.++.+|+.+....... .+-..+..++.|. .+.
T Consensus 623 Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~--~~~e~l~~~~~L~~~~~~l~ 700 (889)
T KOG4658|consen 623 LNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV--LLLEDLLGMTRLRSLLQSLS 700 (889)
T ss_pred eccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh--HhHhhhhhhHHHHHHhHhhh
Confidence 9999988776777777789999999997654 2222223344444554444422211 1112223333333 233
Q ss_pred cccccCCccCchhccCCCCCcEEEccccccCCCCCccccC------CCCCCEEEccCCCCCCCCCccccCCCCCCEEEcc
Q 005177 252 IAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSR------VTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLM 325 (710)
Q Consensus 252 ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 325 (710)
+..+... ..+..+..+.+|+.|.+.++............ ++++..+...++.. ...+.+..-.++|+.|.+.
T Consensus 701 ~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~~~-~r~l~~~~f~~~L~~l~l~ 778 (889)
T KOG4658|consen 701 IEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNCHM-LRDLTWLLFAPHLTSLSLV 778 (889)
T ss_pred hcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhcccc-ccccchhhccCcccEEEEe
Confidence 2222222 34456777889999999888775322211111 11122221111111 1233334455789999999
Q ss_pred cccCcccCCcccCCCCCCcEEeccCCCCCCC-CCcccCCCCCCcEEEC
Q 005177 326 YNEMSGTVPESLVQLPSLEILFIWNNYFSGS-LPENLGRNSKLRWVDV 372 (710)
Q Consensus 326 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~-~p~~l~~~~~L~~L~l 372 (710)
.+.....+.+....+..++.+.+..+.+.+. .-.+.+.++++..+.+
T Consensus 779 ~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l~~~~~l~~l~~i~~~~l 826 (889)
T KOG4658|consen 779 SCRLLEDIIPKLKALLELKELILPFNKLEGLRMLCSLGGLPQLYWLPL 826 (889)
T ss_pred cccccccCCCHHHHhhhcccEEecccccccceeeecCCCCceeEeccc
Confidence 8877766666666677777777777777765 3344455555544443
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.4e-10 Score=119.54 Aligned_cols=88 Identities=26% Similarity=0.167 Sum_probs=56.4
Q ss_pred cCCCCCcEEECcCCCCCCCCC--hhhcCCCCCCEEECCCCCCCcC--CchhccCCCCCCEEEccCCCCCCCCCccc-CCC
Q 005177 122 FNLTSLISLDISRNNFSGHFP--GGIQSLRNLLVLDAFSNSFSGS--VPAEISQLEHLKVLNLAGSYFSGPIPSQF-GSF 196 (710)
Q Consensus 122 ~~l~~L~~L~Ls~N~l~~~~p--~~l~~L~~L~~L~L~~N~l~~~--~p~~~~~L~~L~~L~L~~n~l~~~~p~~~-~~l 196 (710)
.++++|+...|.+..... .+ +....|++++.||||.|-|..- +-.....|++|+.|+|+.|++.-...+.. ..+
T Consensus 118 sn~kkL~~IsLdn~~V~~-~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVED-AGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCccccc-cchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 467778888887776542 22 2456788888888888877642 22345677888888888887764333222 235
Q ss_pred CCCCeEEecCCcCC
Q 005177 197 KSLEFLHLAGNLLN 210 (710)
Q Consensus 197 ~~L~~L~L~~N~l~ 210 (710)
++|+.|.|++|.++
T Consensus 197 ~~lK~L~l~~CGls 210 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLS 210 (505)
T ss_pred hhhheEEeccCCCC
Confidence 66667777766654
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.3e-10 Score=127.33 Aligned_cols=247 Identities=31% Similarity=0.349 Sum_probs=121.3
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
+..++.+++..|.+.. +-..+..+++|+.|++.+|++.+. ...+..+++|++||+++|.|+...+ +..++.|+.|+
T Consensus 71 l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~ 146 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELN 146 (414)
T ss_pred hHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhc-ccchhhhhcchheeccccccccccc--hhhccchhhhe
Confidence 4455555566665542 222345566666666666666532 2224556666666666666654322 34455566666
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCc
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g 259 (710)
+++|.++.. ..+..+++|+.+++++|.+...-+. . ...+.+++.+++.+|.+..
T Consensus 147 l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~-----------------------~-~~~~~~l~~l~l~~n~i~~ 200 (414)
T KOG0531|consen 147 LSGNLISDI--SGLESLKSLKLLDLSYNRIVDIEND-----------------------E-LSELISLEELDLGGNSIRE 200 (414)
T ss_pred eccCcchhc--cCCccchhhhcccCCcchhhhhhhh-----------------------h-hhhccchHHHhccCCchhc
Confidence 666665521 2344455555666665555433220 1 2344455555555555431
Q ss_pred cCchhccCCCCCcEEEccccccCCCCCccccCCC--CCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCccc
Q 005177 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVT--TLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESL 337 (710)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 337 (710)
. ..+..+..+..+++..|.++-.-+. ..+. .|+.+++++|++.- ++..+..+..+..|++..|++... ..+
T Consensus 201 i--~~~~~~~~l~~~~l~~n~i~~~~~l--~~~~~~~L~~l~l~~n~i~~-~~~~~~~~~~l~~l~~~~n~~~~~--~~~ 273 (414)
T KOG0531|consen 201 I--EGLDLLKKLVLLSLLDNKISKLEGL--NELVMLHLRELYLSGNRISR-SPEGLENLKNLPVLDLSSNRISNL--EGL 273 (414)
T ss_pred c--cchHHHHHHHHhhcccccceeccCc--ccchhHHHHHHhcccCcccc-ccccccccccccccchhhcccccc--ccc
Confidence 1 1122223333334455554422211 1111 25666666666652 224455556666666666666532 123
Q ss_pred CCCCCCcEEeccCCCCCCC---CCcc-cCCCCCCcEEECCCCcCCccCcc
Q 005177 338 VQLPSLEILFIWNNYFSGS---LPEN-LGRNSKLRWVDVSTNNFNGSIPP 383 (710)
Q Consensus 338 ~~l~~L~~L~L~~N~l~g~---~p~~-l~~~~~L~~L~ls~N~l~g~ip~ 383 (710)
...+.+..+....|.+... .... ......++.+.+..|......+.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (414)
T KOG0531|consen 274 ERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKISSL 323 (414)
T ss_pred cccchHHHhccCcchhcchhhhhccccccccccccccccccCcccccccc
Confidence 3444555555555554421 1111 34456677777777776655443
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.1e-10 Score=112.40 Aligned_cols=132 Identities=21% Similarity=0.249 Sum_probs=55.9
Q ss_pred ccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCC
Q 005177 217 LGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLK 296 (710)
Q Consensus 217 l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 296 (710)
+..++.|+.+||++|.++ .+..+..-+++++.|++|+|.+... ..+..+++|+.||||+|.++...- +-..+.+.+
T Consensus 280 ~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls~~~G-wh~KLGNIK 355 (490)
T KOG1259|consen 280 ADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLAECVG-WHLKLGNIK 355 (490)
T ss_pred cchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhHhhhh-hHhhhcCEe
Confidence 333444444444444433 2223333344455555555544421 124444555555555554442222 122334444
Q ss_pred EEEccCCCCCCCCCccccCCCCCCEEEcccccCcccC-CcccCCCCCCcEEeccCCCCC
Q 005177 297 SLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTV-PESLVQLPSLEILFIWNNYFS 354 (710)
Q Consensus 297 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~-p~~~~~l~~L~~L~L~~N~l~ 354 (710)
.|.|+.|.+... ..++.+-+|..||+++|++...- -..++++|.|+++.|.+|.+.
T Consensus 356 tL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 356 TLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA 412 (490)
T ss_pred eeehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcc
Confidence 555555544321 22334444455555555443210 123444455555555555444
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.8e-10 Score=112.87 Aligned_cols=142 Identities=25% Similarity=0.212 Sum_probs=109.7
Q ss_pred ccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccC
Q 005177 259 GSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLV 338 (710)
Q Consensus 259 g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 338 (710)
|..-..+..+..|+.||||+|.++ .+..++.-++.++.|++|+|.+... ..+..+++|+.||||+|.++ .+-.|-.
T Consensus 274 G~~~~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~ 349 (490)
T KOG1259|consen 274 GSALVSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHL 349 (490)
T ss_pred CceEEecchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHh
Confidence 444444555677888999999887 5666777778899999999998732 34888899999999999887 4556667
Q ss_pred CCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccC-cccccCCCceeeEecccCCcccchh
Q 005177 339 QLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSI-PPDICSGGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 339 ~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~i-p~~~~~~~~L~~l~l~~N~l~g~i~ 406 (710)
.+.+.+.|.|+.|.+.. -+.++++-+|..||+++|++...- -..+++++.|..+.|.+|.+.+++-
T Consensus 350 KLGNIKtL~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 350 KLGNIKTLKLAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred hhcCEeeeehhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 78889999999998862 245677788999999999986321 2457788899999999999988653
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.5e-10 Score=126.84 Aligned_cols=266 Identities=27% Similarity=0.287 Sum_probs=181.5
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEcc
Q 005177 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (710)
Q Consensus 102 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~ 181 (710)
.++.++...+.+.+.--. ...+..++.+++..|.+.. +-..+..+++|+.|++..|+|.. +...+..+++|++|+|+
T Consensus 50 ~~~~~~~~~~~~~~~~~~-~~~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls 126 (414)
T KOG0531|consen 50 DLEEIDLIFNLDGSDEDL-VESLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLS 126 (414)
T ss_pred hhhhhcchhccccchhhh-HHHhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhh-cccchhhhhcchheecc
Confidence 455566666554321111 1466778888888888874 33447788999999999999884 33336778899999999
Q ss_pred CCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccC
Q 005177 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261 (710)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~ 261 (710)
+|.++... .+..++.|+.|++++|.++.. ..+..++.|+.+++++|.+...-
T Consensus 127 ~N~I~~i~--~l~~l~~L~~L~l~~N~i~~~--------------------------~~~~~l~~L~~l~l~~n~i~~ie 178 (414)
T KOG0531|consen 127 FNKITKLE--GLSTLTLLKELNLSGNLISDI--------------------------SGLESLKSLKLLDLSYNRIVDIE 178 (414)
T ss_pred cccccccc--chhhccchhhheeccCcchhc--------------------------cCCccchhhhcccCCcchhhhhh
Confidence 99888543 366677788888888887631 11333667788888888877443
Q ss_pred c-hhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCC--CCCEEEcccccCcccCCcccC
Q 005177 262 P-KELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLK--NLRLLSLMYNEMSGTVPESLV 338 (710)
Q Consensus 262 p-~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~g~~p~~~~ 338 (710)
+ . ...+.+++.+++.+|.+... ..+..+..+..+++..|.++..-+ +..+. .|+.+++++|++.. ++..+.
T Consensus 179 ~~~-~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~~-~~~~~~ 252 (414)
T KOG0531|consen 179 NDE-LSELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRISR-SPEGLE 252 (414)
T ss_pred hhh-hhhccchHHHhccCCchhcc--cchHHHHHHHHhhcccccceeccC--cccchhHHHHHHhcccCcccc-cccccc
Confidence 3 2 57788999999999988632 233445566666888998874422 22233 38999999999983 446677
Q ss_pred CCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCcc---Cccc-ccCCCceeeEecccCCcccchh
Q 005177 339 QLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGS---IPPD-ICSGGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 339 ~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~---ip~~-~~~~~~L~~l~l~~N~l~g~i~ 406 (710)
.++.+..|++.+|++... ..+.....+..+....|.+... .... .+....+....+..|......+
T Consensus 253 ~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 253 NLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred ccccccccchhhcccccc--ccccccchHHHhccCcchhcchhhhhccccccccccccccccccCccccccc
Confidence 889999999999998743 2344455666677777776522 1222 4556778888888888776554
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.91 E-value=9.5e-09 Score=95.51 Aligned_cols=130 Identities=17% Similarity=0.192 Sum_probs=96.9
Q ss_pred hhcCCCCCccEEEEcCCCcEEEEE-Eeecc--------chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeec
Q 005177 453 EAARPQSAAGCKAVLPTGITVSVK-KIEWG--------ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~~~g~~vAvK-~l~~~--------~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
.+++|+-..+|.+.+.+.. +.+| ++.+. ......-.+|.+++.+++--.|-.-+=|..+.+...|+|||.
T Consensus 3 ~i~~GAEa~i~~~~~~g~~-av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFLGLP-AVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeeccCcc-eEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 5678888899988764333 4444 33321 112445677888888876555544445666778889999999
Q ss_pred CCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccc
Q 005177 524 PNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 592 (710)
Q Consensus 524 ~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~ 592 (710)
++-.|.+.+... +..++..|-+-+.-||.. +|+|+|+.++||.+..+. +.++|||+++..
T Consensus 82 ~G~~lkd~l~~~-----~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 82 EGELLKDALEEA-----RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred CChhHHHHHHhc-----chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCccccc
Confidence 998888888654 466777788888889999 999999999999999765 899999998754
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.3e-09 Score=102.92 Aligned_cols=106 Identities=28% Similarity=0.365 Sum_probs=38.0
Q ss_pred CCCcEEECCCCcCcccCCcccc-CCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhc-cCCCCCCEE
Q 005177 101 NELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEI-SQLEHLKVL 178 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~-~~L~~L~~L 178 (710)
.+++.|+|++|.|+. +. .++ .+.+|+.||||+|.++.. + .+..+++|++|++++|.++. +++.+ ..+++|+.|
T Consensus 19 ~~~~~L~L~~n~I~~-Ie-~L~~~l~~L~~L~Ls~N~I~~l-~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L~~L 93 (175)
T PF14580_consen 19 VKLRELNLRGNQIST-IE-NLGATLDKLEVLDLSNNQITKL-E-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLPNLQEL 93 (175)
T ss_dssp -------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-TT--EE
T ss_pred ccccccccccccccc-cc-chhhhhcCCCEEECCCCCCccc-c-CccChhhhhhcccCCCCCCc-cccchHHhCCcCCEE
Confidence 357888888888863 32 354 577888899999888743 3 47788888888888888884 44444 468888888
Q ss_pred EccCCCCCCCC-CcccCCCCCCCeEEecCCcCCC
Q 005177 179 NLAGSYFSGPI-PSQFGSFKSLEFLHLAGNLLND 211 (710)
Q Consensus 179 ~L~~n~l~~~~-p~~~~~l~~L~~L~L~~N~l~~ 211 (710)
+|++|++...- -..+..+++|+.|+|.+|.++.
T Consensus 94 ~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~ 127 (175)
T PF14580_consen 94 YLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCE 127 (175)
T ss_dssp E-TTS---SCCCCGGGGG-TT--EEE-TT-GGGG
T ss_pred ECcCCcCCChHHhHHHHcCCCcceeeccCCcccc
Confidence 88888886421 1345667888888888887753
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.88 E-value=2.5e-10 Score=114.64 Aligned_cols=134 Identities=20% Similarity=0.226 Sum_probs=75.3
Q ss_pred CCCCcEEEccccccCCCC----CccccCCCCCCEEEccCCCCCCC----CCccccCCCCCCEEEcccccCccc----CCc
Q 005177 268 LTKLESLFLFRNQLAGQV----PWEFSRVTTLKSLDLSDNRLSGP----IPESFADLKNLRLLSLMYNEMSGT----VPE 335 (710)
Q Consensus 268 l~~L~~L~L~~n~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~ 335 (710)
-++|+++...+|++.... ...|...+.|+.+.++.|.+... +...|..+++|+.|||..|-|+.. +..
T Consensus 156 ~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~Lak 235 (382)
T KOG1909|consen 156 KPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAK 235 (382)
T ss_pred CcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHH
Confidence 345666666666654321 12344455666666666665421 223456667777777777766532 234
Q ss_pred ccCCCCCCcEEeccCCCCCCCCCccc-----CCCCCCcEEECCCCcCCcc----CcccccCCCceeeEecccCCc
Q 005177 336 SLVQLPSLEILFIWNNYFSGSLPENL-----GRNSKLRWVDVSTNNFNGS----IPPDICSGGVLFKLILFSNNF 401 (710)
Q Consensus 336 ~~~~l~~L~~L~L~~N~l~g~~p~~l-----~~~~~L~~L~ls~N~l~g~----ip~~~~~~~~L~~l~l~~N~l 401 (710)
.+..+++|+.|++++|.+...-...+ ...++|+++.+.+|.++-. +-..+...+.|..|+|++|.+
T Consensus 236 aL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 236 ALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred HhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 45566677777777776653211111 1245677777777776522 222334456677777777777
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.87 E-value=3.3e-09 Score=114.72 Aligned_cols=237 Identities=17% Similarity=0.112 Sum_probs=160.3
Q ss_pred hhhhhcC--CCCCccEEEEc---CCCcEEEEEEeecc---chhHHHHHHHHHHHhccC-CCCceeEEEEEEcCCceeEEE
Q 005177 450 ECEEAAR--PQSAAGCKAVL---PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~--g~~g~vy~~~~---~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ 520 (710)
....+|. |.+|.+|++.. .++..+|+|+-+.- ....+.=.+|...-.+++ |+|.|+.+..+.+++..++=+
T Consensus 118 ~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqt 197 (524)
T KOG0601|consen 118 ISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQT 197 (524)
T ss_pred cccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceeee
Confidence 5677888 99999999875 67889999985431 111222234444444554 999999888899999999999
Q ss_pred eecCCCChhhhhhc---CCCHHHHHHHHHHHHH----HHHHHhcCCCCCceecCCCCCCeEecCC-CceEEcccCccccc
Q 005177 521 DYLPNGNLSEKIRT---KRDWAAKYKIVLGVAR----GLCFLHHDCYPAIPHGDLKASNIVFDEN-MEPHLAEFGFKYLT 592 (710)
Q Consensus 521 Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~----gL~yLH~~~~~~iiHrDlk~~NiLl~~~-~~~kl~DfGla~~~ 592 (710)
|++. .++.++.+. .++....+.+..+..+ |+.++|.. .|+|-|+||.||.+.++ ...+.+|||+....
T Consensus 198 E~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i 273 (524)
T KOG0601|consen 198 ELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDFGLVSKI 273 (524)
T ss_pred cccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCcceeEEc
Confidence 9886 688888765 2444556667777777 99999998 99999999999999998 88999999987655
Q ss_pred cccCCCC-------cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccC
Q 005177 593 QLADGSF-------PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 665 (710)
Q Consensus 593 ~~~~~~~-------~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (710)
....-.. ..+-+.|+.+|... .-++.+.|+||+|.+.+|-.++..+...+.. ..|... .+.+.+.+..
T Consensus 274 ~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~-~~W~~~---r~~~ip~e~~ 348 (524)
T KOG0601|consen 274 SDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKN-SSWSQL---RQGYIPLEFC 348 (524)
T ss_pred cCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCC-CCcccc---ccccCchhhh
Confidence 4322110 01112244555433 3467788999999999999998776654322 122221 1222221111
Q ss_pred CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 666 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 666 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
.. ...+......++++.+|..|++.+++..
T Consensus 349 ~~-----~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 349 EG-----GSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred cC-----cchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 11 1122233667889999999999877654
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.2e-10 Score=116.93 Aligned_cols=247 Identities=20% Similarity=0.270 Sum_probs=147.3
Q ss_pred CCCCcEEECCCCcCcc----cCCccccCCCCCcEEECcCCCCCCC----CChh-------hcCCCCCCEEECCCCCCCcC
Q 005177 100 FNELVDLNLSHNSFSG----QFPVEIFNLTSLISLDISRNNFSGH----FPGG-------IQSLRNLLVLDAFSNSFSGS 164 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~-------l~~L~~L~~L~L~~N~l~~~ 164 (710)
+..++.++||+|.|.. .+...+.+.++|+.-++|+ .++|. +|+. +...+.|++||||+|-|.-.
T Consensus 29 ~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd-~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~ 107 (382)
T KOG1909|consen 29 MDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSD-MFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPK 107 (382)
T ss_pred cCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHh-hhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCcc
Confidence 5678888888888753 2334566777888888875 33432 3322 22234455555555544322
Q ss_pred CchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCC
Q 005177 165 VPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNM 244 (710)
Q Consensus 165 ~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l 244 (710)
-+..|. +-+.++..|+.|.|.+|.+...--..++ ..|..|. .|. ..++-
T Consensus 108 g~~~l~--------------------~ll~s~~~L~eL~L~N~Glg~~ag~~l~--~al~~l~--~~k-------k~~~~ 156 (382)
T KOG1909|consen 108 GIRGLE--------------------ELLSSCTDLEELYLNNCGLGPEAGGRLG--RALFELA--VNK-------KAASK 156 (382)
T ss_pred chHHHH--------------------HHHHhccCHHHHhhhcCCCChhHHHHHH--HHHHHHH--HHh-------ccCCC
Confidence 222211 0122345555555555544311111111 1122221 111 12334
Q ss_pred CccchhccccccCCcc----CchhccCCCCCcEEEccccccCCCC----CccccCCCCCCEEEccCCCCCCC----CCcc
Q 005177 245 SEVQYLDIAGANLSGS----IPKELSNLTKLESLFLFRNQLAGQV----PWEFSRVTTLKSLDLSDNRLSGP----IPES 312 (710)
Q Consensus 245 ~~L~~L~ls~n~l~g~----~p~~l~~l~~L~~L~L~~n~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~~----~p~~ 312 (710)
++|+++...+|.+... +...|...+.|+.+.++.|.+...- -..+..+++|+.|||..|-++.. +...
T Consensus 157 ~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~Laka 236 (382)
T KOG1909|consen 157 PKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKA 236 (382)
T ss_pred cceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHH
Confidence 5677888777776522 2334566788999999988775211 23467889999999999988643 3345
Q ss_pred ccCCCCCCEEEcccccCcccCCccc-----CCCCCCcEEeccCCCCCCC----CCcccCCCCCCcEEECCCCcCC
Q 005177 313 FADLKNLRLLSLMYNEMSGTVPESL-----VQLPSLEILFIWNNYFSGS----LPENLGRNSKLRWVDVSTNNFN 378 (710)
Q Consensus 313 ~~~l~~L~~L~Ls~N~l~g~~p~~~-----~~l~~L~~L~L~~N~l~g~----~p~~l~~~~~L~~L~ls~N~l~ 378 (710)
+..+++|+.|+++++.+...-...+ ...|+|++|.+.+|.++-. +-.++...+.|..|++++|.+.
T Consensus 237 L~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 237 LSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred hcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 6778899999999998864322222 2478999999999998732 2334566889999999999994
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.82 E-value=7.6e-10 Score=114.11 Aligned_cols=212 Identities=23% Similarity=0.275 Sum_probs=127.0
Q ss_pred CCCCcEEECCCCcCcccCC--ccccCCCCCcEEECcCCCCCCCCC--hhhcCCCCCCEEECCCCCCCcCCchh-ccCCCC
Q 005177 100 FNELVDLNLSHNSFSGQFP--VEIFNLTSLISLDISRNNFSGHFP--GGIQSLRNLLVLDAFSNSFSGSVPAE-ISQLEH 174 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~p--~~l~~L~~L~~L~L~~N~l~~~~p~~-~~~L~~ 174 (710)
+.+|+...|.+.... ..+ .....|++++.||||.|-|..-.| .....|++|+.|+|+.|.+....... -..+++
T Consensus 120 ~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~ 198 (505)
T KOG3207|consen 120 LKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSH 198 (505)
T ss_pred HHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhh
Confidence 567888888887764 222 245679999999999998874333 33578999999999999987433322 236789
Q ss_pred CCEEEccCCCCCCC-CCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccC-CccccCCCccchhcc
Q 005177 175 LKVLNLAGSYFSGP-IPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNI-PWQLGNMSEVQYLDI 252 (710)
Q Consensus 175 L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~-p~~l~~l~~L~~L~l 252 (710)
|+.|.|+.+.++-. +-.....+++|+.|+|..|.....--.....++.|+.|+|+.|.+-... -...+.++.|+.|++
T Consensus 199 lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnl 278 (505)
T KOG3207|consen 199 LKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNL 278 (505)
T ss_pred hheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhc
Confidence 99999999998732 1122346789999999998533332333344566666666666553211 123445555555555
Q ss_pred ccccCCcc-CchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCC-CCccccCCCCCCEEEcccccCc
Q 005177 253 AGANLSGS-IPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGP-IPESFADLKNLRLLSLMYNEMS 330 (710)
Q Consensus 253 s~n~l~g~-~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~ 330 (710)
+.+.+... .|+. ..+ .-....++|++|+++.|++... .-..+..+++|+.|....|.++
T Consensus 279 s~tgi~si~~~d~-------~s~------------~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 279 SSTGIASIAEPDV-------ESL------------DKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred cccCcchhcCCCc-------cch------------hhhcccccceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 55554321 1110 000 0012345666666666666421 1122334556666666667665
Q ss_pred c
Q 005177 331 G 331 (710)
Q Consensus 331 g 331 (710)
.
T Consensus 340 ~ 340 (505)
T KOG3207|consen 340 K 340 (505)
T ss_pred c
Confidence 3
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.7e-09 Score=102.17 Aligned_cols=87 Identities=26% Similarity=0.365 Sum_probs=28.7
Q ss_pred cccCCCCCcEEECcCCCCCCCCChhhc-CCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCccc-CCCC
Q 005177 120 EIFNLTSLISLDISRNNFSGHFPGGIQ-SLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQF-GSFK 197 (710)
Q Consensus 120 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~-~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~-~~l~ 197 (710)
.+.+..+++.|+|++|.|+. + +.++ .+.+|+.|||++|.++. ++ .+..++.|+.|++++|+++. +++.+ ..++
T Consensus 14 ~~~n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp 88 (175)
T PF14580_consen 14 QYNNPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLP 88 (175)
T ss_dssp ------------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-T
T ss_pred cccccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCCc-cccchHHhCC
Confidence 35566789999999999984 3 3465 58899999999999985 33 47789999999999999985 54444 3689
Q ss_pred CCCeEEecCCcCCC
Q 005177 198 SLEFLHLAGNLLND 211 (710)
Q Consensus 198 ~L~~L~L~~N~l~~ 211 (710)
+|+.|++++|++..
T Consensus 89 ~L~~L~L~~N~I~~ 102 (175)
T PF14580_consen 89 NLQELYLSNNKISD 102 (175)
T ss_dssp T--EEE-TTS---S
T ss_pred cCCEEECcCCcCCC
Confidence 99999999999864
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.9e-08 Score=95.34 Aligned_cols=122 Identities=17% Similarity=0.237 Sum_probs=80.3
Q ss_pred ccEEEEcCCCcEEEEEEeeccch---------------------------hHHHHHHHHHHHhccCCC--CceeEEEEEE
Q 005177 461 AGCKAVLPTGITVSVKKIEWGAT---------------------------RIKIVSEFITRIGTVRHK--NLIRLLGFCY 511 (710)
Q Consensus 461 ~vy~~~~~~g~~vAvK~l~~~~~---------------------------~~~~~~~e~~~l~~l~H~--niv~l~g~~~ 511 (710)
.||.|.-++|..||||.-+.+.. ......+|.+.|.++..- ++-+.+++-
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 38999999999999998764210 123467789999988765 345555442
Q ss_pred cCCceeEEEeecC--CCChhhhhhcCCCHHHHHHHHHHHHHHHHHH-hcCCCCCceecCCCCCCeEecCCCceEEcccCc
Q 005177 512 NRHQAYLLYDYLP--NGNLSEKIRTKRDWAAKYKIVLGVARGLCFL-HHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 588 (710)
Q Consensus 512 ~~~~~~lv~Ey~~--~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yL-H~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl 588 (710)
.-++||||++ +..+..+.....+......++.++.+.+..+ |.. +|+|+|+.+.||+++++ .+.++|||-
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~iIDf~q 152 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVYIIDFGQ 152 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEEE--GTT
T ss_pred ---CCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEEEEecCc
Confidence 3479999999 5445443332222344566777777766664 566 99999999999999987 999999996
Q ss_pred cc
Q 005177 589 KY 590 (710)
Q Consensus 589 a~ 590 (710)
+.
T Consensus 153 av 154 (188)
T PF01163_consen 153 AV 154 (188)
T ss_dssp EE
T ss_pred ce
Confidence 54
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.74 E-value=8.7e-08 Score=101.47 Aligned_cols=163 Identities=16% Similarity=0.203 Sum_probs=122.2
Q ss_pred CCCccEEEEc-CCCcEEEEEEeeccchh-HHHHHHHHHHHhccCCCCceeEEEEEEc----CCceeEEEeecCC-CChhh
Q 005177 458 QSAAGCKAVL-PTGITVSVKKIEWGATR-IKIVSEFITRIGTVRHKNLIRLLGFCYN----RHQAYLLYDYLPN-GNLSE 530 (710)
Q Consensus 458 ~~g~vy~~~~-~~g~~vAvK~l~~~~~~-~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~~~lv~Ey~~~-gsL~~ 530 (710)
...+.||+.. .||..++.||++..+.. ......-++..+++.|+|+|++..++.. +.-+++||+|.|+ ++|.+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 3456799974 78999999999543222 2234455788999999999999998874 3468999999996 46766
Q ss_pred hhhc-----------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccc
Q 005177 531 KIRT-----------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 531 ~l~~-----------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~ 593 (710)
+--. ..+....+.++.|+..||.++|+. |..-+-+.+++|+++.+.+++|+-.|+..+.+
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeeec
Confidence 5421 224566789999999999999998 88889999999999999999999888776655
Q ss_pred ccCCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCC
Q 005177 594 LADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGR 638 (710)
Q Consensus 594 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~ 638 (710)
.... +..... .+-|.=.||.+++.|.||..
T Consensus 445 ~d~~------------~~le~~---Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 445 EDPT------------EPLESQ---QQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred CCCC------------cchhHH---hhhhHHHHHHHHHHHhhccc
Confidence 3320 111111 12477789999999999853
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.72 E-value=7.1e-09 Score=80.40 Aligned_cols=57 Identities=33% Similarity=0.479 Sum_probs=23.8
Q ss_pred CcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCC
Q 005177 127 LISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 183 (710)
Q Consensus 127 L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n 183 (710)
|++|++++|+++...++.|.++++|++|++++|.++...|..|.++++|++|++++|
T Consensus 3 L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N 59 (61)
T PF13855_consen 3 LESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNN 59 (61)
T ss_dssp ESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSS
T ss_pred CcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCC
Confidence 344444444444333333444444444444444444333334444444444444444
|
... |
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=9e-08 Score=97.55 Aligned_cols=136 Identities=12% Similarity=0.074 Sum_probs=97.1
Q ss_pred hhhcCCCCCccEEEEcCCCcEEEEEEeeccch------------hHHHHHHHHHHHhccCCCCc--eeEEEEEEc-----
Q 005177 452 EEAARPQSAAGCKAVLPTGITVSVKKIEWGAT------------RIKIVSEFITRIGTVRHKNL--IRLLGFCYN----- 512 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~------------~~~~~~~e~~~l~~l~H~ni--v~l~g~~~~----- 512 (710)
+.+-+.....|++..+ .|+.+.||+...... ....+.+|.+.+.++...+| .+.++|...
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 3344444555777665 778899997753221 11247788888877753333 344555543
Q ss_pred CCceeEEEeecCCC-Chhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC-------CCc
Q 005177 513 RHQAYLLYDYLPNG-NLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-------NME 580 (710)
Q Consensus 513 ~~~~~lv~Ey~~~g-sL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~-------~~~ 580 (710)
....++||||+++- +|.+++.. ..+...+..++.++++.+.-||.. +|+|+|++++|||++. +..
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~ 183 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDLK 183 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCce
Confidence 23578999999976 78888752 234456678999999999999999 9999999999999985 467
Q ss_pred eEEcccCcccc
Q 005177 581 PHLAEFGFKYL 591 (710)
Q Consensus 581 ~kl~DfGla~~ 591 (710)
+.++||+.++.
T Consensus 184 ~~LIDl~r~~~ 194 (268)
T PRK15123 184 LSVIDLHRAQI 194 (268)
T ss_pred EEEEECCcccc
Confidence 89999997653
|
|
| >PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape [] | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.2e-08 Score=72.69 Aligned_cols=41 Identities=37% Similarity=0.688 Sum_probs=30.4
Q ss_pred hhhHHHHHHHHhhCC-CCCCCCCCCCCCCCCCCCCCCCCceeeeeeeC
Q 005177 25 DPYSEALLSLKSELV-DDFNSLHDWFVPPGVNPAGKIYACSWSGVKCN 71 (710)
Q Consensus 25 ~~~~~all~~k~~~~-~~~~~l~~w~~~~~~~~~~~~~~C~w~gv~C~ 71 (710)
++|++||++||+++. +|.+.+.+|+.+. ..+||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~------~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSS------DSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--------S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcC------CCCCeeeccEEeC
Confidence 579999999999997 5778999998530 2689999999996
|
LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A. |
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.1e-07 Score=88.10 Aligned_cols=138 Identities=15% Similarity=0.185 Sum_probs=99.0
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEE-Eeecc--------chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVK-KIEWG--------ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK-~l~~~--------~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 520 (710)
...++-+|+-+.|+++.. .|+...|| +..+. +...+...+|.+.+.+++--.|.--.=++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 456788899999999987 56655555 33321 123566778899988876444443344555656667999
Q ss_pred eecCC-CChhhhhhcCC---CHHHH-HHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc---eEEcccCcccc
Q 005177 521 DYLPN-GNLSEKIRTKR---DWAAK-YKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME---PHLAEFGFKYL 591 (710)
Q Consensus 521 Ey~~~-gsL~~~l~~~~---~~~~~-~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~---~kl~DfGla~~ 591 (710)
||+++ -++.+++.... ..... ...+..|-+.+.-||.. .|+|+||.++||+|..++. +.+.|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99986 36778776522 22233 57888888999999999 9999999999999987653 57999998654
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.1e-08 Score=79.39 Aligned_cols=61 Identities=34% Similarity=0.446 Sum_probs=56.0
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCC
Q 005177 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSF 161 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l 161 (710)
++|++|++++|+++...+..|.++++|++|++++|.++...|..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4689999999999966667888999999999999999988889999999999999999985
|
... |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.44 E-value=5.7e-08 Score=110.58 Aligned_cols=234 Identities=17% Similarity=0.145 Sum_probs=139.8
Q ss_pred hhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 452 EEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
+-+-++.++.++-+.- ..|-..+.|...... .+.+....+-.++-..+||-++...--+......++|++|..+|
T Consensus 810 ~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~~~~~~ 889 (1205)
T KOG0606|consen 810 KPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVGHYLNGG 889 (1205)
T ss_pred ccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhhHHhccC
Confidence 3455677777776653 234333444433211 11222222222222344566665443334567889999999999
Q ss_pred ChhhhhhcCC--C-HHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc---CC---
Q 005177 527 NLSEKIRTKR--D-WAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA---DG--- 597 (710)
Q Consensus 527 sL~~~l~~~~--~-~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~---~~--- 597 (710)
++...++... + .+.|.. +..+..+.+|||.. .+.|||+||.|++...++.-+++|||........ .+
T Consensus 890 ~~~Skl~~~~~~saepaRs~-i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg 965 (1205)
T KOG0606|consen 890 DLPSKLHNSGCLSAEPARSP-ILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSG 965 (1205)
T ss_pred CchhhhhcCCCcccccccch-hHHHHhhhhccccc---hhhcccccccchhhcccCCcccCccccccccccccCcCCccc
Confidence 9999998733 2 233433 34467889999997 7999999999999999999999999843321100 00
Q ss_pred ---------------------------CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccc
Q 005177 598 ---------------------------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP 650 (710)
Q Consensus 598 ---------------------------~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~ 650 (710)
....++.-|..||...+......+|.|++|++++|.++|..|+.....-+
T Consensus 966 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~--- 1042 (1205)
T KOG0606|consen 966 PSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQ--- 1042 (1205)
T ss_pred ccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhh---
Confidence 00001222344566666777788999999999999999999987543211
Q ss_pred ccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 005177 651 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSME 696 (710)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~ 696 (710)
.++.+.... ...+....+....+-++...-+..+|.+|-.|.
T Consensus 1043 ---~f~ni~~~~-~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1043 ---IFENILNRD-IPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred ---hhhccccCC-CCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 112222221 111222222333444555566677888887654
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.33 E-value=3.4e-08 Score=107.73 Aligned_cols=126 Identities=24% Similarity=0.325 Sum_probs=95.8
Q ss_pred CCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCc-ccCCCCCCCeEEe
Q 005177 126 SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPS-QFGSFKSLEFLHL 204 (710)
Q Consensus 126 ~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~L 204 (710)
.|.+.+.+.|.+. ....++.-++.|+.|||++|+++.. +.+..|++|++|||++|.+. .+|. ...++. |+.|.+
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhh-heeeee
Confidence 4667777888876 4556777788999999999999843 37888999999999999998 4443 233444 999999
Q ss_pred cCCcCCCCCcccccccccccccccccccccccCC-ccccCCCccchhccccccCC
Q 005177 205 AGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIP-WQLGNMSEVQYLDIAGANLS 258 (710)
Q Consensus 205 ~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p-~~l~~l~~L~~L~ls~n~l~ 258 (710)
++|.++.. ..+.+|++|+.||+++|-+.+.-. ..++.+..|+.|+|.+|-+-
T Consensus 240 rnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 240 RNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred cccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 99988642 467789999999999998765422 23566778899999988764
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.32 E-value=2.9e-06 Score=83.88 Aligned_cols=127 Identities=17% Similarity=0.184 Sum_probs=89.3
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccch-----------------------hHHHHHHHHHHHhccCCC--Cce
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT-----------------------RIKIVSEFITRIGTVRHK--NLI 504 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~-----------------------~~~~~~~e~~~l~~l~H~--niv 504 (710)
..+.||-|.-+.||.|..+.|.++|||.=+.+.. ......+|.+.|.++.-. .+-
T Consensus 95 iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~VP 174 (304)
T COG0478 95 IGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKVP 174 (304)
T ss_pred hccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCCC
Confidence 4588999999999999999999999997654321 134467888888887543 444
Q ss_pred eEEEEEEcCCceeEEEeecCCCChhhhhhcCCCHHHHH-HHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEE
Q 005177 505 RLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKY-KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 583 (710)
Q Consensus 505 ~l~g~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~-~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl 583 (710)
+-+++ +.-.+||||.++-.|...=-...+.+..+ .|+..+..+. +. +|||+|+.+=||++++||.+.+
T Consensus 175 ~P~~~----nRHaVvMe~ieG~eL~~~r~~~en~~~il~~il~~~~~~~----~~---GiVHGDlSefNIlV~~dg~~~v 243 (304)
T COG0478 175 KPIAW----NRHAVVMEYIEGVELYRLRLDVENPDEILDKILEEVRKAY----RR---GIVHGDLSEFNILVTEDGDIVV 243 (304)
T ss_pred Ccccc----ccceeeeehcccceeecccCcccCHHHHHHHHHHHHHHHH----Hc---CccccCCchheEEEecCCCEEE
Confidence 44432 34589999999866554321122223333 3333443332 34 9999999999999999999999
Q ss_pred cccC
Q 005177 584 AEFG 587 (710)
Q Consensus 584 ~DfG 587 (710)
+||-
T Consensus 244 IDwP 247 (304)
T COG0478 244 IDWP 247 (304)
T ss_pred EeCc
Confidence 9995
|
|
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.6e-06 Score=95.83 Aligned_cols=135 Identities=19% Similarity=0.206 Sum_probs=89.8
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchh-------------------------------HH----------HH
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATR-------------------------------IK----------IV 488 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~-------------------------------~~----------~~ 488 (710)
+.+-++.++-|.||+|++++|+.||||+.+-+-.. .+ ++
T Consensus 129 ~~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy 208 (517)
T COG0661 129 EPEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDY 208 (517)
T ss_pred CCCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCH
Confidence 45788999999999999999999999998743110 01 12
Q ss_pred HHHHHHHhccC-----CCCceeEEEEEEc-CCceeEEEeecCCCChhhhh--hc-CCCHHHHHHHHHHHHHHH-HHHhcC
Q 005177 489 SEFITRIGTVR-----HKNLIRLLGFCYN-RHQAYLLYDYLPNGNLSEKI--RT-KRDWAAKYKIVLGVARGL-CFLHHD 558 (710)
Q Consensus 489 ~~e~~~l~~l~-----H~niv~l~g~~~~-~~~~~lv~Ey~~~gsL~~~l--~~-~~~~~~~~~i~~~ia~gL-~yLH~~ 558 (710)
.+|..-+.+++ .|++. .=.+|++ .....|+|||++|-.+.+.. +. ..+ +..|+..++++. .-+-..
T Consensus 209 ~~EA~n~~~~~~nf~~~~~v~-VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d---~k~ia~~~~~~f~~q~~~d 284 (517)
T COG0661 209 RREAANAERFRENFKDDPDVY-VPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGID---RKELAELLVRAFLRQLLRD 284 (517)
T ss_pred HHHHHHHHHHHHHcCCCCCeE-eceeehhccCCcEEEEEeeCCEecccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhc
Confidence 33333333332 33332 2233333 46778999999998888874 32 223 444444444432 222223
Q ss_pred CCCCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 559 CYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 559 ~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
+++|.|..|.||+++.++....-|||+...
T Consensus 285 ---gffHaDpHpGNi~v~~~g~i~~lDfGi~g~ 314 (517)
T COG0661 285 ---GFFHADPHPGNILVRSDGRIVLLDFGIVGR 314 (517)
T ss_pred ---CccccCCCccceEEecCCcEEEEcCcceec
Confidence 899999999999999999999999998654
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.25 E-value=7.1e-08 Score=84.48 Aligned_cols=104 Identities=23% Similarity=0.300 Sum_probs=57.0
Q ss_pred CcEEECCCCcCcccCCcc---ccCCCCCcEEECcCCCCCCCCChhhcC-CCCCCEEECCCCCCCcCCchhccCCCCCCEE
Q 005177 103 LVDLNLSHNSFSGQFPVE---IFNLTSLISLDISRNNFSGHFPGGIQS-LRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 178 (710)
Q Consensus 103 L~~L~Ls~N~l~~~~p~~---~~~l~~L~~L~Ls~N~l~~~~p~~l~~-L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L 178 (710)
+..+||+++.+. .++.. +.....|+..+|++|.|. .+|..|.. .+-++.|+|++|.++ .+|.++..++.|+.|
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 344555555552 33333 233344555566666665 34444433 335666666666665 456666666666666
Q ss_pred EccCCCCCCCCCcccCCCCCCCeEEecCCcCC
Q 005177 179 NLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLN 210 (710)
Q Consensus 179 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 210 (710)
+++.|.+. ..|..+..|.+|-.|+..+|.+.
T Consensus 106 Nl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred ccccCccc-cchHHHHHHHhHHHhcCCCCccc
Confidence 66666665 34555555666666666666543
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.21 E-value=6.8e-06 Score=80.98 Aligned_cols=104 Identities=21% Similarity=0.313 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHhccCCCC--ceeEEEEEEcCC----ceeEEEeecCCC-Chhhhhhc--CCCHHHHHHHHHHHHHHHHHH
Q 005177 485 IKIVSEFITRIGTVRHKN--LIRLLGFCYNRH----QAYLLYDYLPNG-NLSEKIRT--KRDWAAKYKIVLGVARGLCFL 555 (710)
Q Consensus 485 ~~~~~~e~~~l~~l~H~n--iv~l~g~~~~~~----~~~lv~Ey~~~g-sL~~~l~~--~~~~~~~~~i~~~ia~gL~yL 555 (710)
...+.+|.+.+.+++... +.+.+++..... ..++|+|++++. +|.+++.. ..+-..+..++.++++.++-|
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~l 134 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKL 134 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHH
Confidence 345667777766665333 345666665532 458999999974 78988875 345566788999999999999
Q ss_pred hcCCCCCceecCCCCCCeEecCCC---ceEEcccCcccc
Q 005177 556 HHDCYPAIPHGDLKASNIVFDENM---EPHLAEFGFKYL 591 (710)
Q Consensus 556 H~~~~~~iiHrDlk~~NiLl~~~~---~~kl~DfGla~~ 591 (710)
|.. +|+|+|+++.|||++.+. .+.++||+-++.
T Consensus 135 H~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 135 HDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 999 999999999999999876 789999997654
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.8e-05 Score=76.59 Aligned_cols=132 Identities=11% Similarity=0.068 Sum_probs=98.2
Q ss_pred hcCCCCCccEEEEcCCCcEEEEEEeecc-------chhHHHHHHHHHHHhccCCCC--ceeEEEEEE-cC----CceeEE
Q 005177 454 AARPQSAAGCKAVLPTGITVSVKKIEWG-------ATRIKIVSEFITRIGTVRHKN--LIRLLGFCY-NR----HQAYLL 519 (710)
Q Consensus 454 ig~g~~g~vy~~~~~~g~~vAvK~l~~~-------~~~~~~~~~e~~~l~~l~H~n--iv~l~g~~~-~~----~~~~lv 519 (710)
-|+||-+.||+-.+ .|..+=+|+-+.. ......|.+|...|.++...+ +.+.+ ++. .. -..+||
T Consensus 26 ~~rgG~SgV~r~~~-~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVER-NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEe-CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 47789999999776 4447889987631 224667889999988876433 33444 332 11 246899
Q ss_pred EeecCC-CChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc--eEEcccCccc
Q 005177 520 YDYLPN-GNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME--PHLAEFGFKY 590 (710)
Q Consensus 520 ~Ey~~~-gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~--~kl~DfGla~ 590 (710)
+|-+++ -||.+++.. ..+...+..++.++++.++-||+. ++.|+|+-+.||+++.++. ++++||--++
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 998874 388888854 235566789999999999999999 9999999999999986666 8899996543
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.19 E-value=3.7e-08 Score=107.43 Aligned_cols=38 Identities=26% Similarity=0.387 Sum_probs=20.5
Q ss_pred CCCCEEECCCCCCCcCC-chhccCCCCCCEEEccCCCCC
Q 005177 149 RNLLVLDAFSNSFSGSV-PAEISQLEHLKVLNLAGSYFS 186 (710)
Q Consensus 149 ~~L~~L~L~~N~l~~~~-p~~~~~L~~L~~L~L~~n~l~ 186 (710)
++++.|.+-.-.-.+.. |-.+....+|++|.|.++.+.
T Consensus 84 qkt~~lkl~~~pa~~pt~pi~ifpF~sLr~LElrg~~L~ 122 (1096)
T KOG1859|consen 84 QKTKVLKLLPSPARDPTEPISIFPFRSLRVLELRGCDLS 122 (1096)
T ss_pred hhheeeeecccCCCCCCCCceeccccceeeEEecCcchh
Confidence 44444444333222222 556666777777777776664
|
|
| >KOG2982 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.19 E-value=6.6e-07 Score=88.33 Aligned_cols=43 Identities=26% Similarity=0.254 Sum_probs=26.7
Q ss_pred CCCCCCEEEcccccCccc-CCcccCCCCCCcEEeccCCCCCCCC
Q 005177 315 DLKNLRLLSLMYNEMSGT-VPESLVQLPSLEILFIWNNYFSGSL 357 (710)
Q Consensus 315 ~l~~L~~L~Ls~N~l~g~-~p~~~~~l~~L~~L~L~~N~l~g~~ 357 (710)
.++.+..|+|+.|++..- --+.+..+++|.-|.+++|.+...+
T Consensus 222 ~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l 265 (418)
T KOG2982|consen 222 PFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPL 265 (418)
T ss_pred CCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccccc
Confidence 345555677777766421 1134567788888888888776544
|
|
| >KOG2982 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.11 E-value=1e-06 Score=86.96 Aligned_cols=189 Identities=21% Similarity=0.253 Sum_probs=95.4
Q ss_pred CCCCcEEECcCCCCCC--CCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCC-CCCcccCCCCCCC
Q 005177 124 LTSLISLDISRNNFSG--HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLE 200 (710)
Q Consensus 124 l~~L~~L~Ls~N~l~~--~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~-~~p~~~~~l~~L~ 200 (710)
.+.++.|||..|.++. .+-..+.+|+.|++|+|+.|.+...|...-..+.+|++|-|.+..+.- ...+.+..++.++
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vt 149 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVT 149 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhh
Confidence 4555666666666542 222234456666666666666654332222345566666666655531 1223344556666
Q ss_pred eEEecCCcCCCCCcccccccccccccccccccccccCC--ccccCCCccchhccccccCCccCchhccCCCCCcEEEccc
Q 005177 201 FLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIP--WQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFR 278 (710)
Q Consensus 201 ~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p--~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~ 278 (710)
.|+++.|.+. .+.+..|..+.--| ..+...+.+..+.++-|++...+ +++..+.+..
T Consensus 150 elHmS~N~~r--------------q~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~F-------pnv~sv~v~e 208 (418)
T KOG2982|consen 150 ELHMSDNSLR--------------QLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIF-------PNVNSVFVCE 208 (418)
T ss_pred hhhhccchhh--------------hhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhc-------ccchheeeec
Confidence 6666665321 11111111110000 00112223334444445554333 4556666666
Q ss_pred cccCCCC-CccccCCCCCCEEEccCCCCCCC-CCccccCCCCCCEEEcccccCcccC
Q 005177 279 NQLAGQV-PWEFSRVTTLKSLDLSDNRLSGP-IPESFADLKNLRLLSLMYNEMSGTV 333 (710)
Q Consensus 279 n~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~g~~ 333 (710)
|.+...- -..+..++.+..|+|+.|++... --+.+..++.|..|.+++|.+...+
T Consensus 209 ~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l 265 (418)
T KOG2982|consen 209 GPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPL 265 (418)
T ss_pred CcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccccc
Confidence 6553211 12334455666888888887542 1245677888999999988877543
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 710 | ||||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 7e-35 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 8e-35 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 2e-30 | ||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 2e-30 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 2e-19 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 4e-17 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 3e-14 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 5e-06 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 2e-16 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 3e-16 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 3e-14 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 5e-14 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 5e-14 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 1e-13 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 3e-12 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-12 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-12 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 3e-12 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 4e-12 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 4e-12 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 4e-12 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 4e-12 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 6e-12 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 7e-12 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 8e-12 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 9e-12 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 9e-12 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 1e-11 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 1e-11 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 1e-11 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 2e-11 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-11 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 2e-11 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 2e-11 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 2e-11 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 2e-11 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 3e-11 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 3e-11 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 3e-11 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 1e-10 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 1e-10 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 3e-10 | ||
| 2omx_A | 462 | Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX | 5e-10 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 1e-09 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 2e-09 | ||
| 2omt_A | 462 | Crystal Structure Of Inla G194s+sHEC1 COMPLEX Lengt | 2e-09 | ||
| 1o6s_A | 466 | Internalin (Listeria Monocytogenes) E-Cadherin (Hum | 3e-09 | ||
| 2omy_A | 461 | Crystal Structure Of Inla S192n/hec1 Complex Length | 3e-09 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 3e-09 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 6e-09 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 6e-09 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 6e-09 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 6e-09 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 7e-09 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 7e-09 | ||
| 2omz_A | 466 | Crystal Structure Of Inla Y369a/hec1 Complex Length | 9e-09 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 9e-09 | ||
| 2omu_A | 462 | Crystal Structure Of Inla G194s+s Y369s/hec1 Comple | 9e-09 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 9e-09 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 9e-09 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 1e-08 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 1e-08 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 1e-08 | ||
| 2omv_A | 461 | Crystal Structure Of Inla S192n Y369s/hec1 Complex | 1e-08 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 1e-08 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 1e-08 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 1e-08 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 1e-08 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 1e-08 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 1e-08 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 1e-08 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 1e-08 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 1e-08 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 1e-08 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 1e-08 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 2e-08 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 2e-08 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 2e-08 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 2e-08 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 2e-08 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 2e-08 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 2e-08 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 2e-08 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 2e-08 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 3e-08 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 4e-08 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 5e-08 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 5e-08 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 6e-08 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 8e-08 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 1e-07 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 1e-07 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 1e-07 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 1e-07 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 1e-07 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 1e-07 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 1e-07 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 1e-07 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 2e-07 | ||
| 3lmg_A | 344 | Crystal Structure Of The Erbb3 Kinase Domain In Com | 2e-07 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 2e-07 | ||
| 3kex_A | 325 | Crystal Structure Of The Catalytically Inactive Kin | 2e-07 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 2e-07 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 2e-07 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 2e-07 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 2e-07 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 2e-07 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 2e-07 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 2e-07 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 3e-07 | ||
| 2p0c_A | 313 | Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro | 3e-07 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 3e-07 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 3e-07 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 3e-07 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 4e-07 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 4e-07 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 4e-07 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 4e-07 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 5e-07 | ||
| 2wqb_A | 324 | Structure Of The Tie2 Kinase Domain In Complex With | 5e-07 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 7e-07 | ||
| 3m18_A | 251 | Crystal Structure Of Variable Lymphocyte Receptor V | 7e-07 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 8e-07 | ||
| 3kj4_A | 286 | Structure Of Rat Nogo Receptor Bound To 1d9 Antagon | 8e-07 | ||
| 2wfh_A | 193 | The Human Slit 2 Dimerization Domain D4 Length = 19 | 1e-06 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 1e-06 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 1e-06 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-06 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-06 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 1e-06 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 1e-06 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 2e-06 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 2e-06 | ||
| 2o6q_A | 270 | Structural Diversity Of The Hagfish Variable Lympho | 2e-06 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 2e-06 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 2e-06 | ||
| 3m19_A | 251 | Crystal Structure Of Variable Lymphocyte Receptor V | 2e-06 | ||
| 3kmw_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 2e-06 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 2e-06 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 2e-06 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 3e-06 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 4e-06 | ||
| 1vr2_A | 316 | Human Vascular Endothelial Growth Factor Receptor 2 | 4e-06 | ||
| 3b2d_A | 603 | Crystal Structure Of Human Rp105MD-1 Complex Length | 4e-06 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 4e-06 | ||
| 4agc_A | 353 | Crystal Structure Of Vegfr2 (Juxtamembrane And Kina | 5e-06 | ||
| 2xir_A | 316 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 5e-06 | ||
| 1ywn_A | 316 | Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p | 6e-06 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 7e-06 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 7e-06 | ||
| 3ewh_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 7e-06 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 7e-06 | ||
| 3u6j_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 7e-06 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 8e-06 | ||
| 2p2h_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 8e-06 | ||
| 2p2i_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 8e-06 | ||
| 3cjf_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 1e-05 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 1e-05 | ||
| 3cjg_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 1e-05 | ||
| 1p8t_A | 285 | Crystal Structure Of Nogo-66 Receptor Length = 285 | 1e-05 | ||
| 2oh4_A | 316 | Crystal Structure Of Vegfr2 With A Benzimidazole-Ur | 1e-05 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 1e-05 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 1e-05 | ||
| 1ozn_A | 285 | 1.5a Crystal Structure Of The Nogo Receptor Ligand | 1e-05 | ||
| 3c1x_A | 373 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-05 | ||
| 3mdy_A | 337 | Crystal Structure Of The Cytoplasmic Domain Of The | 2e-05 | ||
| 3dkg_A | 317 | Sgx Clone 5698a109kfg1h1 Length = 317 | 2e-05 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 2e-05 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 2e-05 | ||
| 3a4p_A | 319 | Human C-Met Kinase Domain Complexed With 6-Benzylox | 2e-05 | ||
| 3qti_A | 314 | C-Met Kinase In Complex With Nvp-Bvu972 Length = 31 | 2e-05 | ||
| 3dkc_A | 317 | Sgx Clone 5698a65kfg1h1 Length = 317 | 2e-05 | ||
| 1r0p_A | 312 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-05 | ||
| 3cth_A | 314 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-05 | ||
| 3c7q_A | 316 | Structure Of Vegfr2 Kinase Domain In Complex With B | 3e-05 | ||
| 3h9r_A | 330 | Crystal Structure Of The Kinase Domain Of Type I Ac | 3e-05 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 3e-05 | ||
| 3vnt_A | 318 | Crystal Structure Of The Kinase Domain Of Human Veg | 3e-05 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 3e-05 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 3e-05 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 4e-05 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 4e-05 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 4e-05 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 4e-05 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 4e-05 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 4e-05 | ||
| 3mtf_A | 301 | Crystal Structure Of The Acvr1 Kinase In Complex Wi | 4e-05 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 4e-05 | ||
| 4dym_A | 301 | Crystal Structure Of The Acvr1 Kinase Domain In Com | 4e-05 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 4e-05 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 4e-05 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 4e-05 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 4e-05 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 4e-05 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 4e-05 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 4e-05 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 5e-05 | ||
| 2buj_A | 317 | Crystal Structure Of The Human Serine-Threonine Kin | 5e-05 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 5e-05 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 6e-05 | ||
| 3q4t_A | 322 | Crystal Structure Of Activin Receptor Type-Iia (Acv | 9e-05 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 1e-04 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 1e-04 | ||
| 1luf_A | 343 | Crystal Structure Of The Musk Tyrosine Kinase: Insi | 1e-04 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 1e-04 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 1e-04 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 1e-04 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 1e-04 | ||
| 4e5a_X | 360 | The W197a Mutant Of P38a Map Kinase Length = 360 | 2e-04 | ||
| 3rfj_A | 279 | Design Of A Binding Scaffold Based On Variable Lymp | 2e-04 | ||
| 3kmu_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 2e-04 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 2e-04 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 2e-04 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 2e-04 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 2e-04 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 2e-04 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 2e-04 | ||
| 3q6w_A | 307 | Structure Of Dually-phosphorylated Met Receptor Kin | 2e-04 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 2e-04 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 2e-04 | ||
| 3g3a_A | 178 | Structure Of A Lamprey Variable Lymphocyte Receptor | 2e-04 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 2e-04 | ||
| 3g39_A | 170 | Structure Of A Lamprey Variable Lymphocyte Receptor | 3e-04 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 3e-04 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 3e-04 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 3e-04 | ||
| 4bcf_A | 331 | Structure Of Cdk9 In Complex With Cyclin T And A 2- | 3e-04 | ||
| 3t6q_A | 606 | Crystal Structure Of Mouse Rp105MD-1 Complex Length | 3e-04 | ||
| 2w9f_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 3e-04 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 3e-04 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 3e-04 | ||
| 3rfs_A | 272 | Design Of A Binding Scaffold Based On Variable Lymp | 4e-04 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 4e-04 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 5e-04 | ||
| 3bbt_B | 328 | Crystal Structure Of The Erbb4 Kinase In Complex Wi | 5e-04 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 5e-04 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 5e-04 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 5e-04 | ||
| 2r4b_A | 321 | Erbb4 Kinase Domain Complexed With A Thienopyrimidi | 5e-04 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 5e-04 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 6e-04 | ||
| 3uto_A | 573 | Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin- | 6e-04 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 6e-04 | ||
| 1koa_A | 491 | Twitchin Kinase Fragment (C.Elegans), Autoregulated | 6e-04 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 6e-04 | ||
| 4agu_A | 311 | Crystal Structure Of The Human Cdkl1 Kinase Domain | 7e-04 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 7e-04 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 7e-04 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 8e-04 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 8e-04 | ||
| 3nnx_A | 354 | Crystal Structure Of Phosphorylated P38 Alpha In Co | 8e-04 | ||
| 2iw6_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com | 8e-04 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 8e-04 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 8e-04 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 9e-04 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 9e-04 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 9e-04 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 9e-04 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 9e-04 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 9e-04 |
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX Length = 462 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX Length = 462 | Back alignment and structure |
|
| >pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human) Recognition Complex Length = 466 | Back alignment and structure |
|
| >pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex Length = 461 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex Length = 466 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex Length = 462 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex Length = 461 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor Vlra.R2.1 In Complex With Hen Egg Lysozyme Length = 251 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist Antibody Length = 286 | Back alignment and structure |
|
| >pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4 Length = 193 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte Receptors A29 Length = 270 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor Vlra.R5.1 Length = 251 | Back alignment and structure |
|
| >pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex Length = 603 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353 | Back alignment and structure |
|
| >pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316 | Back alignment and structure |
|
| >pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor Length = 285 | Back alignment and structure |
|
| >pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding Domain Reveals A Convergent Recognition Scaffold Mediating Inhibition Of Myelination Length = 285 | Back alignment and structure |
|
| >pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373 | Back alignment and structure |
|
| >pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337 | Back alignment and structure |
|
| >pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314 | Back alignment and structure |
|
| >pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312 | Back alignment and structure |
|
| >pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316 | Back alignment and structure |
|
| >pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
| >pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte Receptors Of Jawless Vertebrates By Module Engineering Length = 279 | Back alignment and structure |
|
| >pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Apo) Length = 271 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|3G3A|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor In Complex With A Protein Antigen Length = 178 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|3G39|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor Length = 170 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331 | Back alignment and structure |
|
| >pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex Length = 606 | Back alignment and structure |
|
| >pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte Receptors Of Jawless Vertebrates By Module Engineering Length = 272 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354 | Back alignment and structure |
|
| >pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 286 bits (735), Expect = 3e-86
Identities = 98/331 (29%), Positives = 158/331 (47%), Gaps = 16/331 (4%)
Query: 80 INLSMKGLSGALPGKPLRIFFN--ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNF 137
+ +S +SG + L L++S N+FS P + + ++L LDIS N
Sbjct: 183 LAISGNKISGDVD------VSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKL 235
Query: 138 SGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQ-FGSF 196
SG F I + L +L+ SN F G +P L+ L+ L+LA + F+G IP G+
Sbjct: 236 SGDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGAC 293
Query: 197 KSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIP-WQLGNMSEVQYLDIAGA 255
+L L L+GN +P G + + + N + G +P L M ++ LD++
Sbjct: 294 DTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFN 353
Query: 256 NLSGSIPKELSNLT-KLESLFLFRNQLAGQVPWEFSRV--TTLKSLDLSDNRLSGPIPES 312
SG +P+ L+NL+ L +L L N +G + + TL+ L L +N +G IP +
Sbjct: 354 EFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPT 413
Query: 313 FADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDV 372
++ L L L +N +SGT+P SL L L L +W N G +P+ L L + +
Sbjct: 414 LSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLIL 473
Query: 373 STNNFNGSIPPDICSGGVLFKLILFSNNFTG 403
N+ G IP + + L + L +N TG
Sbjct: 474 DFNDLTGEIPSGLSNCTNLNWISLSNNRLTG 504
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 269 bits (690), Expect = 8e-80
Identities = 89/348 (25%), Positives = 168/348 (48%), Gaps = 22/348 (6%)
Query: 80 INLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG 139
++LS SG + + N L +L L +N F+G+ P + N + L+SL +S N SG
Sbjct: 373 LDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSG 432
Query: 140 HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSL 199
P + SL L L + N G +P E+ ++ L+ L L + +G IPS + +L
Sbjct: 433 TIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNL 492
Query: 200 EFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259
++ L+ N L +IP +G L+ + +++ N + GNIP +LG+ + +LD+ +G
Sbjct: 493 NWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNG 552
Query: 260 SIPKELSNLTKLESLFLF----------------------RNQLAGQVPWEFSRVTTLKS 297
+IP + + + + G + +R++T
Sbjct: 553 TIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNP 612
Query: 298 LDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSL 357
+++ G +F + ++ L + YN +SG +P+ + +P L IL + +N SGS+
Sbjct: 613 CNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSI 672
Query: 358 PENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIV 405
P+ +G L +D+S+N +G IP + + +L ++ L +NN +G +
Sbjct: 673 PDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPI 720
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 262 bits (673), Expect = 2e-77
Identities = 101/382 (26%), Positives = 157/382 (41%), Gaps = 65/382 (17%)
Query: 28 SEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLSMKGL 87
L+S K L D N L DW NP C++ GV C + V I+LS K L
Sbjct: 14 IHQLISFKDVLPDK-NLLPDWS--SNKNP------CTFDGVTCR--DDKVTSIDLSSKPL 62
Query: 88 SGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQS 147
+ + +LT L SL +S ++ +G G +
Sbjct: 63 NVGF-----------------------SAVSSSLLSLTGLESLFLSNSHINGSVSG-FKC 98
Query: 148 LRNLLVLDAFSNSFSGSVPA--EISQLEHLKVLNLAGSYFSGPIP-SQFGSFKSLEFLHL 204
+L LD NS SG V + LK LN++ + P S SLE L L
Sbjct: 99 SASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDL 158
Query: 205 AGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE 264
+ N ++ E+++L I+G +SG +
Sbjct: 159 SANSISGANVVGW---------------------VLSDGCGELKHLAISGNKISGDVD-- 195
Query: 265 LSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSL 324
+S LE L + N + +P+ + L+ LD+S N+LSG + + L+LL++
Sbjct: 196 VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNI 254
Query: 325 MYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN-SKLRWVDVSTNNFNGSIPP 383
N+ G +P L SL+ L + N F+G +P+ L L +D+S N+F G++PP
Sbjct: 255 SSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPP 312
Query: 384 DICSGGVLFKLILFSNNFTGIV 405
S +L L L SNNF+G +
Sbjct: 313 FFGSCSLLESLALSSNNFSGEL 334
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 258 bits (661), Expect = 1e-75
Identities = 95/325 (29%), Positives = 155/325 (47%), Gaps = 14/325 (4%)
Query: 80 INLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG 139
++LS LSG +P ++L DL L N G+ P E+ + +L +L + N+ +G
Sbjct: 423 LHLSFNYLSGTIP--SSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTG 480
Query: 140 HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSL 199
P G+ + NL + +N +G +P I +LE+L +L L+ + FSG IP++ G +SL
Sbjct: 481 EIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSL 540
Query: 200 EFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAG--ANL 257
+L L NL N IPA + +I NF G + N + AG
Sbjct: 541 IWLDLNTNLFNGTIPAAMFKQSG----KIAANFIAGKRYVYIKNDGMKKECHGAGNLLEF 596
Query: 258 SGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLK 317
G ++L+ L+ + G F ++ LD+S N LSG IP+ +
Sbjct: 597 QGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMP 656
Query: 318 NLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNF 377
L +L+L +N++SG++P+ + L L IL + +N G +P+ + + L +D+S NN
Sbjct: 657 YLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNL 716
Query: 378 NGSIPPDICSGGVL--FKLILFSNN 400
+G IP G F F NN
Sbjct: 717 SGPIP----EMGQFETFPPAKFLNN 737
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 192 bits (489), Expect = 6e-52
Identities = 74/246 (30%), Positives = 116/246 (47%), Gaps = 14/246 (5%)
Query: 72 KNNTIVVGINLSMKGLSGALP---GKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLI 128
N T + I+LS L+G +P G+ L L LS+NSFSG P E+ + SLI
Sbjct: 487 SNCTNLNWISLSNNRLTGEIPKWIGR-----LENLAILKLSNNSFSGNIPAELGDCRSLI 541
Query: 129 SLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY--FS 186
LD++ N F+G P + + +N +G I K + AG+ F
Sbjct: 542 WLDLNTNLFNGTIPAAMFKQSGKI----AANFIAGKRYVYIKNDGMKKECHGAGNLLEFQ 597
Query: 187 GPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSE 246
G Q + ++ + ++ +++ YN G IP ++G+M
Sbjct: 598 GIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPY 657
Query: 247 VQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLS 306
+ L++ ++SGSIP E+ +L L L L N+L G++P S +T L +DLS+N LS
Sbjct: 658 LFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLS 717
Query: 307 GPIPES 312
GPIPE
Sbjct: 718 GPIPEM 723
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 245 bits (628), Expect = 8e-76
Identities = 83/328 (25%), Positives = 134/328 (40%), Gaps = 40/328 (12%)
Query: 29 EALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACSWSGVKCNK--NNTIVVGINLSMKG 86
+ALL +K +L + +L W P +W GV C+ V ++LS
Sbjct: 9 QALLQIKKDLGNP-TTLSSW------LPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLN 61
Query: 87 LSGALPGKPLRIF-FNELVDLNLSH-NSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGG 144
L P P + L L + N+ G P I LT L L I+ N SG P
Sbjct: 62 LPKPYP-IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDF 120
Query: 145 IQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSL-EFLH 203
+ ++ L+ LD N+ SG++P IS L +L + G+ SG IP +GSF L +
Sbjct: 121 LSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMT 180
Query: 204 LAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPK 263
++ N L +IP L + ++D++ L G
Sbjct: 181 ISRNRLTGKIPPTFANLN-------------------------LAFVDLSRNMLEGDASV 215
Query: 264 ELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLS 323
+ + + L +N LA + + L LDL +NR+ G +P+ LK L L+
Sbjct: 216 LFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLN 274
Query: 324 LMYNEMSGTVPESLVQLPSLEILFIWNN 351
+ +N + G +P+ L ++ NN
Sbjct: 275 VSFNNLCGEIPQGGN-LQRFDVSAYANN 301
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 171 bits (436), Expect = 3e-48
Identities = 60/221 (27%), Positives = 92/221 (41%), Gaps = 25/221 (11%)
Query: 185 FSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNM 244
+ G + + L L+G L P IP L N+
Sbjct: 38 WLGVLCDTDTQTYRVNNLDLSGLNLPKPYP----------------------IPSSLANL 75
Query: 245 SEVQYLDIAGAN-LSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDN 303
+ +L I G N L G IP ++ LT+L L++ ++G +P S++ TL +LD S N
Sbjct: 76 PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYN 135
Query: 304 RLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSL-EILFIWNNYFSGSLPENLG 362
LSG +P S + L NL ++ N +SG +P+S L + I N +G +P
Sbjct: 136 ALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFA 195
Query: 363 RNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTG 403
N L +VD+S N G S K+ L N+
Sbjct: 196 -NLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAF 235
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 1e-33
Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 4/158 (2%)
Query: 250 LDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQ--VPWEFSRVTTLKSLDLSD-NRLS 306
D G + + ++ +L L L +P + + L L + N L
Sbjct: 31 TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLV 90
Query: 307 GPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSK 366
GPIP + A L L L + + +SG +P+ L Q+ +L L N SG+LP ++
Sbjct: 91 GPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPN 150
Query: 367 LRWVDVSTNNFNGSIPPDICSGGVLFK-LILFSNNFTG 403
L + N +G+IP S LF + + N TG
Sbjct: 151 LVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTG 188
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 56.0 bits (136), Expect = 1e-08
Identities = 27/149 (18%), Positives = 48/149 (32%), Gaps = 39/149 (26%)
Query: 264 ELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKS----LDLSDNRLSGPIPESFADLKNL 319
EL N ++L + L TTL S D + G + ++ +
Sbjct: 1 ELCNPQDKQALLQIKKDLGNP--------TTLSSWLPTTDCCNRTWLGVLCDTDTQTYRV 52
Query: 320 RLLSLMYNEMSGT--VPESLVQLPSLEILFIWN-NYFSGSLPENLGRNSKLRWVDVSTNN 376
L L + +P SL LP L L+I N G +P + + ++L ++
Sbjct: 53 NNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLY----- 107
Query: 377 FNGSIPPDICSGGVLFKLILFSNNFTGIV 405
+ N +G +
Sbjct: 108 -------------------ITHTNVSGAI 117
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 196 bits (501), Expect = 4e-54
Identities = 77/352 (21%), Positives = 133/352 (37%), Gaps = 24/352 (6%)
Query: 69 KCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLI 128
KC ++ + + S L+ +P + LNL+HN + L
Sbjct: 1 KCTVSHEVA---DCSHLKLT-QVP----DDLPTNITVLNLTHNQLRRLPAANFTRYSQLT 52
Query: 129 SLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGP 188
SLD+ N S P Q L L VL+ N S + +L L+L +
Sbjct: 53 SLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKI 112
Query: 189 IPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPW--QLGNMSE 246
+ F K+L L L+ N L+ L+ + + + N Q + S
Sbjct: 113 KNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSS 172
Query: 247 VQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFS---RVTTLKSLDLSDN 303
++ L+++ + P + +L LFL QL + + T++++L LS++
Sbjct: 173 LKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNS 232
Query: 304 RLSGPIPESFADLK--NLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENL 361
+LS +F LK NL +L L YN ++ +S LP LE F+ N +L
Sbjct: 233 QLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSL 292
Query: 362 GRNSKLRWVDVSTNNFNGS--------IPPDICSG-GVLFKLILFSNNFTGI 404
+R++++ + S I L L + N+ GI
Sbjct: 293 HGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGI 344
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 175 bits (446), Expect = 1e-46
Identities = 63/321 (19%), Positives = 116/321 (36%), Gaps = 19/321 (5%)
Query: 81 NLSMKGLSGA-LPGKPLRIFFN--ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNF 137
+ + + +S A LP F L LN+ N G L +L L +S +
Sbjct: 306 SFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFT 365
Query: 138 SGHFPGGIQ----SLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQ- 192
S + L +L+ N S S L HL+VL+L + + Q
Sbjct: 366 SLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQE 425
Query: 193 FGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG--NIPWQLGNMSEVQYL 250
+ +++ ++L+ N ++ ++ + + + + P + + L
Sbjct: 426 WRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTIL 485
Query: 251 DIAGANLSGSIPKELSNLTKLESLFLFRNQL--------AGQVPWEFSRVTTLKSLDLSD 302
D++ N++ L L KLE L L N L G + ++ L L+L
Sbjct: 486 DLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLES 545
Query: 303 NRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLG 362
N E F DL L+++ L N ++ SL+ L + N + + G
Sbjct: 546 NGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFG 605
Query: 363 RN-SKLRWVDVSTNNFNGSIP 382
L +D+ N F+ +
Sbjct: 606 PAFRNLTELDMRFNPFDCTCE 626
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 174 bits (443), Expect = 2e-46
Identities = 61/323 (18%), Positives = 113/323 (34%), Gaps = 21/323 (6%)
Query: 103 LVDLNLSHNSFSGQFPVEIF---NLTSLISLDISRNNFSGHFPGGIQSLR--NLLVLDAF 157
L L L++ ++ TS+ +L +S + S L+ NL +LD
Sbjct: 197 LFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLS 256
Query: 158 SNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNL--------- 208
N+ + + L L+ L + ++ +L+L +
Sbjct: 257 YNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLAS 316
Query: 209 LNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELS-- 266
L LK + H+ + N G + ++YL ++ + S +
Sbjct: 317 LPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFV 376
Query: 267 --NLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIP-ESFADLKNLRLLS 323
+ L L L +N+++ FS + L+ LDL N + + + + L+N+ +
Sbjct: 377 SLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIY 436
Query: 324 LMYNEMSGTVPESLVQLPSLEILFIWNNYFSG--SLPENLGRNSKLRWVDVSTNNFNGSI 381
L YN+ S +PSL+ L + S P L +D+S NN
Sbjct: 437 LSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANIN 496
Query: 382 PPDICSGGVLFKLILFSNNFTGI 404
+ L L L NN +
Sbjct: 497 DDMLEGLEKLEILDLQHNNLARL 519
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 172 bits (439), Expect = 8e-46
Identities = 76/354 (21%), Positives = 127/354 (35%), Gaps = 31/354 (8%)
Query: 80 INLSMKGLSGALPGKPLRIFFN-ELVDLNLSHNSFSGQFPVEIFNL--TSLISLDISRNN 136
+ L+ L +L K N + +L+LS++ S L T+L LD+S NN
Sbjct: 200 LFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNN 259
Query: 137 FSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY---------FSG 187
+ L L N+ + L +++ LNL S+
Sbjct: 260 LNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPK 319
Query: 188 PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQ-----GNIPWQLG 242
F K LE L++ N + L + ++ + +F L
Sbjct: 320 IDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLA 379
Query: 243 NMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVP-WEFSRVTTLKSLDLS 301
+ S + L++ +S S L LE L L N++ ++ E+ + + + LS
Sbjct: 380 H-SPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLS 438
Query: 302 DNRLSGPIPESFADLKNLRLLSLMYNEMSG--TVPESLVQLPSLEILFIWNNYFSGSLPE 359
N+ SFA + +L+ L L + + P L +L IL + NN + +
Sbjct: 439 YNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDD 498
Query: 360 NLGRNSKLRWVDVSTNNFNGSIPPDICSGGV---------LFKLILFSNNFTGI 404
L KL +D+ NN + GG L L L SN F I
Sbjct: 499 MLEGLEKLEILDLQHNNLA-RLWKHANPGGPIYFLKGLSHLHILNLESNGFDEI 551
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 170 bits (434), Expect = 4e-45
Identities = 62/320 (19%), Positives = 101/320 (31%), Gaps = 18/320 (5%)
Query: 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS 160
++S S L L L++ N+ G L NL L ++
Sbjct: 305 RSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSF 364
Query: 161 FSGSVPAEIS----QLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPA- 215
S + L +LNL + S F LE L L N + ++
Sbjct: 365 TSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQ 424
Query: 216 ELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG--SIPKELSNLTKLES 273
E L+ + + + YN Y + +Q L + L S P L L
Sbjct: 425 EWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTI 484
Query: 274 LFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLS--------GPIPESFADLKNLRLLSLM 325
L L N +A + L+ LDL N L+ G L +L +L+L
Sbjct: 485 LDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLE 544
Query: 326 YNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDI 385
N E L L+I+ + N + L+ +++ N + +
Sbjct: 545 SNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITS-VEKKV 603
Query: 386 CSGGV--LFKLILFSNNFTG 403
L +L + N F
Sbjct: 604 FGPAFRNLTELDMRFNPFDC 623
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 169 bits (430), Expect = 1e-44
Identities = 64/323 (19%), Positives = 107/323 (33%), Gaps = 21/323 (6%)
Query: 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRN--LLVLDAFSNS 160
L+ L+LSHN S L +L L +S N + N L L+ SN
Sbjct: 123 LITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQ 182
Query: 161 FSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSF---KSLEFLHLAGNLLNDQIPAEL 217
P + L L L + + S+ L L+ + L+
Sbjct: 183 IKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTF 242
Query: 218 GMLKTV--THMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLF 275
LK T +++ YN + +++Y + N+ L L + L
Sbjct: 243 LGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLN 302
Query: 276 LFRN---------QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMY 326
L R+ L + F + L+ L++ DN + G F L NL+ LSL
Sbjct: 303 LKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSN 362
Query: 327 NEMSGTVPESLV----QLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIP 382
+ S + L IL + N S + L +D+ N +
Sbjct: 363 SFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELT 422
Query: 383 PDICSG-GVLFKLILFSNNFTGI 404
G +F++ L N + +
Sbjct: 423 GQEWRGLENIFEIYLSYNKYLQL 445
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 2e-40
Identities = 56/291 (19%), Positives = 105/291 (36%), Gaps = 19/291 (6%)
Query: 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGG-IQSLRNLLVLDAFSN 159
+ L LNL+ N S L L LD+ N G + L N+ + N
Sbjct: 381 SPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYN 440
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSG--PIPSQFGSFKSLEFLHLAGNLLNDQIPAEL 217
+ + + L+ L L PS F ++L L L+ N + + L
Sbjct: 441 KYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDML 500
Query: 218 GMLKTVTHMEIGYN--------FYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLT 269
L+ + +++ +N G + L +S + L++ + +L
Sbjct: 501 EGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLF 560
Query: 270 KLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFAD-LKNLRLLSLMYNE 328
+L+ + L N L F+ +LKSL+L N ++ + F +NL L + +N
Sbjct: 561 ELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNP 620
Query: 329 MSGTVPE-----SLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVST 374
T + + I + ++Y + P + +R D S+
Sbjct: 621 FDCTCESIAWFVNWINETHTNIPELSSHYLCNT-PPHY-HGFPVRLFDTSS 669
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 137 bits (347), Expect = 5e-34
Identities = 55/219 (25%), Positives = 87/219 (39%), Gaps = 5/219 (2%)
Query: 198 SLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANL 257
S E + L Q+P +L +T + + +N + S++ LD+ +
Sbjct: 5 SHEVADCSHLKL-TQVPDDL--PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTI 61
Query: 258 SGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLK 317
S P+ L L+ L L N+L+ F+ T L L L N + F K
Sbjct: 62 SKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQK 121
Query: 318 NLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLG--RNSKLRWVDVSTN 375
NL L L +N +S T + VQL +L+ L + NN E L NS L+ +++S+N
Sbjct: 122 NLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSN 181
Query: 376 NFNGSIPPDICSGGVLFKLILFSNNFTGIVMFIAAALLG 414
P + G LF L L + + L
Sbjct: 182 QIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELA 220
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 195 bits (497), Expect = 7e-54
Identities = 59/355 (16%), Positives = 123/355 (34%), Gaps = 35/355 (9%)
Query: 81 NLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNF--- 137
N K + +L D+ + + + P + L + ++++ N
Sbjct: 231 NSEYAQQYKTEDLKWDNL--KDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISG 288
Query: 138 -----SGHFPGGIQSLRNLLVLDAFSNSF-SGSVPAEISQLEHLKVLNLAGSYFSGPIPS 191
+ ++ N+ + V + +++ L +L + G +P+
Sbjct: 289 EQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLPA 348
Query: 192 QFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYN-FYQGNIPWQLGNMSEVQYL 250
FGS L L+LA N + + G + V ++ +N + ++S + +
Sbjct: 349 -FGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAI 407
Query: 251 DIAGANLSG-------SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDN 303
D + + + + S+ L NQ++ FS + L S++L N
Sbjct: 408 DFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGN 467
Query: 304 RLSG-------PIPESFADLKNLRLLSLMYNEMSGTVPE-SLVQLPSLEILFIWNNYFSG 355
L+ E+F + L + L +N+++ + LP L + + N FS
Sbjct: 468 MLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTKLSDDFRATTLPYLVGIDLSYNSFSK 527
Query: 356 SLPENLGRNSKLRW------VDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGI 404
P +S L+ D N P I L +L + SN+ +
Sbjct: 528 -FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIRKV 581
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 188 bits (480), Expect = 2e-51
Identities = 54/328 (16%), Positives = 103/328 (31%), Gaps = 30/328 (9%)
Query: 101 NELVDLNLSHNSF-SGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
++ + + +N+ + + + L L+ N G P S L L+ N
Sbjct: 305 EKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLPA-FGSEIKLASLNLAYN 363
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLN-------D 211
+ E ++ L+ A + P S + + + N + D
Sbjct: 364 QITEIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFD 423
Query: 212 QIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAG-------ANLSGSIPKE 264
+ V+ + + N S + +++ G N +
Sbjct: 424 PLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENEN 483
Query: 265 LSNLTKLESLFLFRNQLAGQVPWEF--SRVTTLKSLDLSDNRLSGPIPESFADLKNLRLL 322
N L S+ L N+L + +F + + L +DLS N S P + L+
Sbjct: 484 FKNTYLLTSIDLRFNKLTK-LSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGF 541
Query: 323 SLM------YNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNN 376
+ N PE + PSL L I +N + E + N + +D+ N
Sbjct: 542 GIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIR-KVNEKITPN--ISVLDIKDNP 598
Query: 377 FNGSIPPDICSGGVLFKLILFSNNFTGI 404
+C +LF + I
Sbjct: 599 NISIDLSYVCPYIEAGMYMLFYDKTQDI 626
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 168 bits (427), Expect = 2e-44
Identities = 51/390 (13%), Positives = 108/390 (27%), Gaps = 77/390 (19%)
Query: 29 EALLSLKSELVDDFNSLHDWF-----VPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLS 83
LS +E + D+ +L + + G +W+ K G++L+
Sbjct: 19 PIKLSRTAEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLN 78
Query: 84 MKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPG 143
G + L+L SG+ P I LT L L + +
Sbjct: 79 SNG---------------RVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKV---- 119
Query: 144 GIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLH 203
+ P IS + ++ +F
Sbjct: 120 ----------------NERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPR---EDFSD 160
Query: 204 LAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPK 263
L + +N + Q +I + + N++ + K
Sbjct: 161 LIKDCINS-------------------DPQQKSIKKSSRITLKDTQIGQLSNNIT-FVSK 200
Query: 264 ELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLS 323
+ LTKL ++ + + E ++ + + + +LK+L +
Sbjct: 201 AVMRLTKLRQFYMGNSPFVAENICEA-----WENENSEYAQQYKTEDLKWDNLKDLTDVE 255
Query: 324 LMYNEMSGTVPESLVQLPSLEILFIWNNYF--------SGSLPENLGRNSKLRWVDVSTN 375
+ +P L LP ++++ + N + K++ + + N
Sbjct: 256 VYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYN 315
Query: 376 NF-NGSIPPDICSGGVLFKLILFSNNFTGI 404
N + + L L N G
Sbjct: 316 NLKTFPVETSLQKMKKLGMLECLYNQLEGK 345
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 182 bits (463), Expect = 2e-48
Identities = 55/431 (12%), Positives = 122/431 (28%), Gaps = 72/431 (16%)
Query: 16 VFVPAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACSWSGVKCNKNNT 75
+ + + +AL ++ L + + ++ +W+ K
Sbjct: 259 IQLKETAEYIKDYKALKAIWEALDGKNWRYYSGTINNTIHS------LNWNFNKELDMWG 312
Query: 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRN 135
G++L G + L+L+ G+ P I LT L L +
Sbjct: 313 DQPGVDLDNNG---------------RVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTH 357
Query: 136 NFSG--------HFPGGIQSLRNLLVLDAFSNSFSGSVPA---------------EISQL 172
+ + + R + + F E+ +
Sbjct: 358 SETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPI 417
Query: 173 EHLKVLNLAGSYFSG------PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHM 226
+ ++L + I L+ ++ A + A
Sbjct: 418 KKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWED-----A 472
Query: 227 EIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAG--- 283
Y N N+ ++ +++ +P L +L +L+SL + N+
Sbjct: 473 NSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQ 532
Query: 284 ------QVPWEFSRVTTLKSLDLSDNRLSG-PIPESFADLKNLRLLSLMYNEMSGTVPES 336
++ + ++ + N L P S + L LL ++N++ E+
Sbjct: 533 LKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKV--RHLEA 590
Query: 337 LVQLPSLEILFIWNNYFSGSLPENLGRN-SKLRWVDVSTNNFNGSIPPDICSGG--VLFK 393
L L + N +PE+ ++ + S N IP + V+
Sbjct: 591 FGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGS 648
Query: 394 LILFSNNFTGI 404
+ N
Sbjct: 649 VDFSYNKIGSE 659
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 168 bits (428), Expect = 7e-44
Identities = 49/337 (14%), Positives = 97/337 (28%), Gaps = 39/337 (11%)
Query: 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSF 161
+ D N + + NL L +++ P + L L L+ N
Sbjct: 468 DWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRG 527
Query: 162 SG---------SVPAEISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLND 211
+ + +++ + + P + L L N +
Sbjct: 528 ISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKVR- 586
Query: 212 QIPAELGMLKTVTHMEIGYNFYQGNIPWQLG-NMSEVQYLDIAGANLSGSIPK--ELSNL 268
+ G +T +++ YN + IP +V+ L + L IP ++
Sbjct: 587 HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSV 643
Query: 269 TKLESLFLFRNQLAGQVPWEFS-----RVTTLKSLDLSDNRLSGPIPESFADLKNLRLLS 323
+ S+ N++ + + ++ LS N + E FA + +
Sbjct: 644 YVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTII 703
Query: 324 LMYN-------EMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN--SKLRWVDVST 374
L N + L + + N + SL ++ L +DVS
Sbjct: 704 LSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSY 762
Query: 375 NNFNGSIPPDICSGGVLFKL------ILFSNNFTGIV 405
N F+ S P + L N
Sbjct: 763 NCFS-SFPTQPLNSSQLKAFGIRHQRDAEGNRILRQW 798
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 152 bits (385), Expect = 2e-38
Identities = 50/328 (15%), Positives = 106/328 (32%), Gaps = 33/328 (10%)
Query: 101 NELVDLNLSHNSFSGQFPVE--IFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFS 158
++ + +N+ FP + + L LD N H + L L
Sbjct: 548 PKIQIFYMGYNNLEE-FPASASLQKMVKLGLLDCVHNKVR-HLEA-FGTNVKLTDLKLDY 604
Query: 159 NSFSGSVPAEI-SQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLN---DQI 213
N +P + + + ++ L + + P S + + + N + I
Sbjct: 605 NQIE-EIPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMGSVDFSYNKIGSEGRNI 663
Query: 214 PAELGMLKTV--THMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS-------GSIPKE 264
+ K + + + + YN Q S + + ++ ++
Sbjct: 664 SCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGN 723
Query: 265 LSNLTKLESLFLFRNQLAGQVP--WEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLL 322
N L ++ L N+L + + + + L ++D+S N S P + L+
Sbjct: 724 YKNTYLLTTIDLRFNKLTS-LSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAF 781
Query: 323 SLMY------NEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNN 376
+ + N + P + PSL L I +N + E L +L +D++ N
Sbjct: 782 GIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDIR-KVDEKLT--PQLYILDIADNP 838
Query: 377 FNGSIPPDICSGGVLFKLILFSNNFTGI 404
+C +L + I
Sbjct: 839 NISIDVTSVCPYIEAGMYVLLYDKTQDI 866
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 166 bits (422), Expect = 3e-46
Identities = 81/286 (28%), Positives = 129/286 (45%), Gaps = 70/286 (24%)
Query: 464 KAVLPTGITVSVKKI-EWGATRIKIVSEFITR---IGTVRHKNLIRLLGFCYNRHQAYLL 519
K L G V+VK++ E + +F T I H+NL+RL GFC + L+
Sbjct: 48 KGRLADGTLVAVKRLKEERTQGGE--LQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 105
Query: 520 YDYLPNGNLSEKIRTKR------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNI 573
Y Y+ NG+++ +R + DW + +I LG ARGL +LH C P I H D+KA+NI
Sbjct: 106 YPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANI 165
Query: 574 VFDENMEPHLAEFGF-KYL--------TQLADGSF----PAKIAW---TESGEFYNAMKE 617
+ DE E + +FG K + T + G+ P ++ +E
Sbjct: 166 LLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR-GTIGHIAPEYLSTGKSSEKT-------- 216
Query: 618 EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP-------------------IDGLLGEM 658
DV+G+G ++LE++T R + + +D L
Sbjct: 217 ----DVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGN 272
Query: 659 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 704
Y + EV + ++ VALLCT+S+P +RP M E +++L G
Sbjct: 273 YKDEEV----------EQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 163 bits (414), Expect = 6e-43
Identities = 66/356 (18%), Positives = 112/356 (31%), Gaps = 44/356 (12%)
Query: 95 PLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVL 154
P + F+ +L+LS N F+ L LD+SR G QSL +L L
Sbjct: 23 PDNLPFS-TKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTL 81
Query: 155 DAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP 214
N S L L+ L + + G K+L+ L++A NL+
Sbjct: 82 ILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQS--- 138
Query: 215 AELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLE-- 272
+P N++ +++LD++ + +L L ++
Sbjct: 139 --------------------FKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLL 178
Query: 273 --SLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPE-SFADLKNLRLLSLMYNEM 329
SL L N + P F L L L +N S + + L L + L+ E
Sbjct: 179 NLSLDLSLNPMNFIQPGAFKE-IRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEF 237
Query: 330 SGTVP---------ESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGS 380
E L L E + +Y+ + + + + + +
Sbjct: 238 RNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERV 297
Query: 381 IPPDICSGGVLFKLILFSNNFTGIVMFIAAALLGIFFFRRGGKGHWKMISFLGLPQ 436
G L L + F +L + F G S + LP
Sbjct: 298 KDFSYNFG--WQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGN---AFSEVDLPS 348
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 161 bits (409), Expect = 3e-42
Identities = 60/293 (20%), Positives = 105/293 (35%), Gaps = 13/293 (4%)
Query: 99 FFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFS 158
+ L L + F L SL L + N F L +L LD
Sbjct: 302 YNFGWQHLELVNCKFGQ---FPTLKLKSLKRLTFTSNKGGNAFS--EVDLPSLEFLDLSR 356
Query: 159 N--SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAE 216
N SF G LK L+L+ + + S F + LE L + L
Sbjct: 357 NGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFS 415
Query: 217 -LGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE-LSNLTKLESL 274
L+ + +++I + + +S ++ L +AG + + + + L L L
Sbjct: 416 VFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 475
Query: 275 FLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVP 334
L + QL P F+ +++L+ L++S N + L +L++L N + +
Sbjct: 476 DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKK 535
Query: 335 ESLVQLP-SLEILFIWNNYFSGSLPENLGRN--SKLRWVDVSTNNFNGSIPPD 384
+ L P SL L + N F+ + R + V + P D
Sbjct: 536 QELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSD 588
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 160 bits (407), Expect = 6e-42
Identities = 65/340 (19%), Positives = 116/340 (34%), Gaps = 27/340 (7%)
Query: 80 INLSMKGLSGALPGKPLRIFFN-ELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNF 137
++LS+ ++ PG F L L L +N S L L + F
Sbjct: 182 LDLSLNPMNFIQPG----AFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEF 237
Query: 138 SGHF------PGGIQSLRNLLVLD---AFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGP 188
++ L NL + + A+ + + + + L ++ +L
Sbjct: 238 RNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERV 297
Query: 189 IPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQ 248
+ + L L +L LK +T +G + ++ ++
Sbjct: 298 KDFSY--NFGWQHLELVNCKFGQFPTLKLKSLKRLTF-----TSNKGGNAFSEVDLPSLE 350
Query: 249 YLDIAGANLS--GSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLS 306
+LD++ LS G + T L+ L L N + + F + L+ LD + L
Sbjct: 351 FLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLK 409
Query: 307 GPIPES-FADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSL-PENLGRN 364
S F L+NL L + + L SLE+L + N F + P+
Sbjct: 410 QMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTEL 469
Query: 365 SKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGI 404
L ++D+S P S L L + NNF +
Sbjct: 470 RNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSL 509
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 157 bits (398), Expect = 1e-40
Identities = 62/340 (18%), Positives = 117/340 (34%), Gaps = 41/340 (12%)
Query: 103 LVDLNLSHNSF-SGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNL----LVLDAF 157
L +LN++HN S + P NLT+L LD+S N + ++ L + L LD
Sbjct: 126 LKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLS 185
Query: 158 SNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQ-FGSFKSLEFLHLAGNLLNDQI--- 213
N + P ++ L L L ++ S + LE L ++
Sbjct: 186 LNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLE 244
Query: 214 PAELGMLKTVTHMEIGYN------FYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSN 267
+ L+ + ++ I +Y +I ++ V + + S
Sbjct: 245 KFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKD--FSY 302
Query: 268 LTKLESLFLFRNQLAGQVPWEFSRV-------------------TTLKSLDLSDNRLS-- 306
+ L L + + + +L+ LDLS N LS
Sbjct: 303 NFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFK 362
Query: 307 GPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN-S 365
G +S +L+ L L +N + T+ + + L LE L ++ ++ +
Sbjct: 363 GCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLR 421
Query: 366 KLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIV 405
L ++D+S + + L L + N+F
Sbjct: 422 NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENF 461
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 154 bits (392), Expect = 5e-40
Identities = 61/316 (19%), Positives = 106/316 (33%), Gaps = 23/316 (7%)
Query: 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGG-IQSLRNLLVLDAFSNSF 161
+ L+LS N + F L L + N S + IQ L L V F
Sbjct: 179 NLSLDLSLNPMNF-IQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEF 237
Query: 162 SGSV------PAEISQLEHLKVLNLAGSY---FSGPIPSQFGSFKSLEFLHLAGNLLNDQ 212
+ + L +L + +Y + I F ++ L +
Sbjct: 238 RNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERV 297
Query: 213 IPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLE 272
H+E+ + +L ++ + + + G +L LE
Sbjct: 298 KD--FSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFT-----SNKGGNAFSEVDLPSLE 350
Query: 273 SLFLFRNQLA--GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS 330
L L RN L+ G T+LK LDLS N + + +F L+ L L ++ +
Sbjct: 351 FLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLK 409
Query: 331 GTVPES-LVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGG 389
S + L +L L I + + + S L + ++ N+F + PDI +
Sbjct: 410 QMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTEL 469
Query: 390 V-LFKLILFSNNFTGI 404
L L L +
Sbjct: 470 RNLTFLDLSQCQLEQL 485
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 1e-29
Identities = 35/173 (20%), Positives = 67/173 (38%), Gaps = 7/173 (4%)
Query: 237 IPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLK 296
IP L + LD++ L + +L+ L L R ++ + ++ L
Sbjct: 22 IPDNL--PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLS 79
Query: 297 SLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYF-SG 355
+L L+ N + +F+ L +L+ L + ++ + L +L+ L + +N S
Sbjct: 80 TLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF 139
Query: 356 SLPENLGRNSKLRWVDVSTNNFNGSIPPDICS----GGVLFKLILFSNNFTGI 404
LPE + L +D+S+N D+ + L L N I
Sbjct: 140 KLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFI 192
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 162 bits (411), Expect = 2e-42
Identities = 67/315 (21%), Positives = 112/315 (35%), Gaps = 13/315 (4%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFN---LTSLISLDISRNNFSGHFPGGIQSLRNLLVLDA 156
L +F S+ S+++ ++ F L LD
Sbjct: 227 IQSLWLGTFEDMDDE-DISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDL 285
Query: 157 FSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAE 216
+ S +P+ + L LK L L+ + F +F SL L + GN ++
Sbjct: 286 TATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTG 344
Query: 217 -LGMLKTVTHMEIGYNF--YQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLES 273
L L+ + +++ ++ QL N+S +Q L+++ + +LE
Sbjct: 345 CLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLEL 404
Query: 274 LFLFRNQLAGQVPWE-FSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGT 332
L L +L + F + LK L+LS + L + F L L+ L+L N
Sbjct: 405 LDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKG 464
Query: 333 V---PESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGG 389
SL L LEIL + S + VD+S N S + S
Sbjct: 465 NIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLT-SSSIEALSHL 523
Query: 390 VLFKLILFSNNFTGI 404
L L SN+ + I
Sbjct: 524 KGIYLNLASNHISII 538
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 157 bits (398), Expect = 8e-41
Identities = 66/315 (20%), Positives = 119/315 (37%), Gaps = 15/315 (4%)
Query: 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGG-----IQSLRNLLVLDA 156
+ LNL+ N +G F+ SL+ G IQSL D
Sbjct: 180 TNLSLNLNGNDIAG-IEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDM 238
Query: 157 FSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAE 216
S +V + ++ ++ +NL YF + F F L+ L L L+ ++P+
Sbjct: 239 DDEDISPAVFEGLCEM-SVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSG 296
Query: 217 LGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE-LSNLTKLESLF 275
L L T+ + + N ++ N + +L I G + L NL L L
Sbjct: 297 LVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELD 356
Query: 276 LFRNQLA--GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTV 333
L + + + ++ L+SL+LS N E+F + L LL L + +
Sbjct: 357 LSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKD 416
Query: 334 PES-LVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSI--PPDICSG-G 389
+S L L++L + ++ S + L+ +++ N+F + G
Sbjct: 417 AQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLG 476
Query: 390 VLFKLILFSNNFTGI 404
L L+L + + I
Sbjct: 477 RLEILVLSFCDLSSI 491
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 149 bits (378), Expect = 4e-38
Identities = 58/312 (18%), Positives = 102/312 (32%), Gaps = 13/312 (4%)
Query: 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFS 162
L L S + + N +L SL + N+ S L VLD +N+
Sbjct: 107 LKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIH 166
Query: 163 GSVPAEISQLEHLKVLNLAGSY-FSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLK 221
++S L+ L+L + I + L+ G I L
Sbjct: 167 YLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNST 226
Query: 222 TVTHMEIGYNFYQ-----GNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFL 276
+ + + L MS V+ +++ + L+ L L
Sbjct: 227 IQSLWLGTFEDMDDEDISPAVFEGLCEMS-VESINLQKHYFFNISSNTFHCFSGLQELDL 285
Query: 277 FRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTV-PE 335
L+ ++P ++TLK L LS N+ S ++ +L LS+ N +
Sbjct: 286 TATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTG 344
Query: 336 SLVQLPSLEILFIWNN--YFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSG-GVLF 392
L L +L L + ++ S L S L+ +++S N S+ + L
Sbjct: 345 CLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPL-SLKTEAFKECPQLE 403
Query: 393 KLILFSNNFTGI 404
L L
Sbjct: 404 LLDLAFTRLKVK 415
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 149 bits (377), Expect = 5e-38
Identities = 55/315 (17%), Positives = 98/315 (31%), Gaps = 10/315 (3%)
Query: 99 FFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFS 158
N L S N L +L LD++R QS L L +
Sbjct: 31 LPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTA 90
Query: 159 NSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG 218
N +S + LK L + S + K+LE L+L N ++ +
Sbjct: 91 NPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGF 150
Query: 219 MLKTVTHMEIGYNFYQGNIPWQLGNMSE--VQYLDIAGANLSGSIPKELSNLTKLESLFL 276
+ + ++ N + ++ + L++ G N I + +SL
Sbjct: 151 PTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNG-NDIAGIEPGAFDSAVFQSLNF 209
Query: 277 FRNQLAGQVPWE--FSRVTTLKSLDLSDNRLSGPIPESFADLKNLRL--LSLMYNEMSGT 332
Q + S + +L D P F L + + ++L +
Sbjct: 210 GGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNI 269
Query: 333 VPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSG-GVL 391
+ L+ L + + S LP L S L+ + +S N F + S L
Sbjct: 270 SSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFEN-LCQISASNFPSL 327
Query: 392 FKLILFSNNFTGIVM 406
L + N +
Sbjct: 328 THLSIKGNTKRLELG 342
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 146 bits (371), Expect = 3e-37
Identities = 67/308 (21%), Positives = 116/308 (37%), Gaps = 14/308 (4%)
Query: 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG-HFPGGIQSLRNLLVLDAFSN-- 159
L L LS N F + N SL L I N G +++L NL LD +
Sbjct: 303 LKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDI 362
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP-AELG 218
S ++ L HL+ LNL+ + F LE L LA L + +
Sbjct: 363 ETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQ 422
Query: 219 MLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE---LSNLTKLESLF 275
L + + + ++ + + +Q+L++ G + ++ L L +LE L
Sbjct: 423 NLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILV 482
Query: 276 LFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPE 335
L L+ F+ + + +DLS NRL+ E+ + LK + L+L N +S +P
Sbjct: 483 LSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGIY-LNLASNHISIILPS 541
Query: 336 SLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFK-L 394
L L + + N + N+ L W + + +C L + +
Sbjct: 542 LLPILSQQRTINLRQNPLDCT-CSNIYF---LEWYKENMQKLEDTEDT-LCENPPLLRGV 596
Query: 395 ILFSNNFT 402
L +
Sbjct: 597 RLSDVTLS 604
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 144 bits (364), Expect = 2e-36
Identities = 51/305 (16%), Positives = 103/305 (33%), Gaps = 11/305 (3%)
Query: 106 LNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSV 165
N + + + P + N S L+ S N L NL LD
Sbjct: 17 YNCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIH 73
Query: 166 PAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTH 225
L L L + + K+L+ L ++ L KT+
Sbjct: 74 EDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLES 133
Query: 226 MEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFL--FRNQLAG 283
+ +G N + +++ LD + +++S+L + +L L N +
Sbjct: 134 LYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDI-A 192
Query: 284 QVPWEFSRVTTLKSLDLSDNRLSGPIPE--SFADLKNLRLLSLMYNEMSGTVPESLVQLP 341
+ +SL+ + I + + +++L L + + P L
Sbjct: 193 GIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLC 252
Query: 342 --SLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSN 399
S+E + + +YF S L+ +D++ + + +P + L KL+L +N
Sbjct: 253 EMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSAN 311
Query: 400 NFTGI 404
F +
Sbjct: 312 KFENL 316
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 2e-25
Identities = 35/205 (17%), Positives = 62/205 (30%), Gaps = 4/205 (1%)
Query: 202 LHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261
+ LN +IP L + +E +N + + +LD+ +
Sbjct: 17 YNCENLGLN-EIPGTL--PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIH 73
Query: 262 PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRL 321
+ +L++L L N L S LK L +S + K L
Sbjct: 74 EDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLES 133
Query: 322 LSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVS-TNNFNGS 380
L L N +S L++L NN E++ + + ++ N
Sbjct: 134 LYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAG 193
Query: 381 IPPDICSGGVLFKLILFSNNFTGIV 405
I P V L ++
Sbjct: 194 IEPGAFDSAVFQSLNFGGTQNLLVI 218
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 4e-38
Identities = 63/280 (22%), Positives = 110/280 (39%), Gaps = 73/280 (26%)
Query: 470 GITVSVKKIEWGATR--IKIVSEF---ITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524
TV+VKK+ ++ +F I + +H+NL+ LLGF + L+Y Y+P
Sbjct: 54 NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMP 113
Query: 525 NGNLSEKIRTKR-----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM 579
NG+L +++ W + KI G A G+ FLH + H D+K++NI+ DE
Sbjct: 114 NGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAF 170
Query: 580 EPHLAEFGFKYLTQLADGSFPAKIAWTES---------GEF-YNAMKEEMYM-------- 621
+++FG A+ + + G Y A E +
Sbjct: 171 TAKISDFGL------------ARASEKFAQTVMTSRIVGTTAYMA-PE--ALRGEITPKS 215
Query: 622 DVYGFGEIILEILTNGRLTNAGSSLQN-----KP-----------IDGLLGEMYNENEVG 665
D+Y FG ++LEI+T + Q + ID + + + V
Sbjct: 216 DIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMND-ADSTSV- 273
Query: 666 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705
+ + VA C + RP +++ +LL +
Sbjct: 274 ---------EAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 143 bits (363), Expect = 4e-38
Identities = 57/282 (20%), Positives = 92/282 (32%), Gaps = 41/282 (14%)
Query: 90 ALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLR 149
A V L L QFP + F L+ L + I P +Q
Sbjct: 70 ATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFA 127
Query: 150 NLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG---------SYFSGPIPSQFGSFKSLE 200
L L N ++PA I+ L L+ L++ S + +L+
Sbjct: 128 GLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQ 186
Query: 201 FLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS 260
L L + +PA + L+ + ++I + LS +
Sbjct: 187 SLRLEWTGIR-SLPASIANLQNLKSLKIRNS------------------------PLS-A 220
Query: 261 IPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSD-NRLSGPIPESFADLKNL 319
+ + +L KLE L L P F LK L L D + L +P L L
Sbjct: 221 LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLT-LPLDIHRLTQL 279
Query: 320 RLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENL 361
L L +P + QLP+ I+ + + L ++
Sbjct: 280 EKLDLRGCVNLSRLPSLIAQLPANCIILVPPH-LQAQLDQHR 320
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 5e-38
Identities = 50/303 (16%), Positives = 98/303 (32%), Gaps = 35/303 (11%)
Query: 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPG------------------- 143
+L ++ + + + D +R + +
Sbjct: 14 RENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATAD 73
Query: 144 --GIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEF 201
+ + L+ S P + +L HL+ + + + +P F LE
Sbjct: 74 LLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLME-LPDTMQQFAGLET 131
Query: 202 LHLAGNLLNDQIPAELGMLKTVTHMEIGYN---------FYQGNIPWQLGNMSEVQYLDI 252
L LA N L +PA + L + + I + + + +Q L +
Sbjct: 132 LTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRL 190
Query: 253 AGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPES 312
+ S+P ++NL L+SL + + L+ + + L+ LDL P
Sbjct: 191 EWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPI 248
Query: 313 FADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDV 372
F L+ L L T+P + +L LE L + LP + + + V
Sbjct: 249 FGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILV 308
Query: 373 STN 375
+
Sbjct: 309 PPH 311
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 135 bits (343), Expect = 2e-35
Identities = 41/307 (13%), Positives = 97/307 (31%), Gaps = 35/307 (11%)
Query: 123 NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSG------------------- 163
+ + +L + + + + D +
Sbjct: 10 HSSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALK 69
Query: 164 SVPAEISQL--EHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLK 221
+ + L L P Q L+ + + L ++P +
Sbjct: 70 ATADLLEDATQPGRVALELRSVPLPQ-FPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFA 127
Query: 222 TVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSN---------LTKLE 272
+ + + N + +P + +++ ++ L I +P+ L++ L L+
Sbjct: 128 GLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQ 186
Query: 273 SLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGT 332
SL L + +P + + LKSL + ++ LS + + L L L L
Sbjct: 187 SLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRN 244
Query: 333 VPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLF 392
P L+ L + + +LP ++ R ++L +D+ +P I
Sbjct: 245 YPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANC 304
Query: 393 KLILFSN 399
+++ +
Sbjct: 305 IILVPPH 311
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 1e-28
Identities = 50/266 (18%), Positives = 91/266 (34%), Gaps = 19/266 (7%)
Query: 145 IQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHL 204
L ++ +SQ + + + + + + +
Sbjct: 8 HHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHS----AWRQANSNNPQIETR 63
Query: 205 AGNLLNDQIPAELGMLKTVTHMEIGYNFYQ-GNIPWQLGNMSEVQYLDIAGANLSGSIPK 263
G L L + + P Q +S +Q++ I A L +P
Sbjct: 64 TGRALKA-TADLLEDATQPGRVALELRSVPLPQFPDQAFRLSHLQHMTIDAAGLM-ELPD 121
Query: 264 ELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFA--------- 314
+ LE+L L RN L +P + + L+ L + +PE A
Sbjct: 122 TMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQ 180
Query: 315 DLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVST 374
L NL+ L L + + ++P S+ L +L+ L I N+ S +L + KL +D+
Sbjct: 181 GLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRG 238
Query: 375 NNFNGSIPPDICSGGVLFKLILFSNN 400
+ PP L +LIL +
Sbjct: 239 CTALRNYPPIFGGRAPLKRLILKDCS 264
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 84.2 bits (209), Expect = 9e-18
Identities = 28/186 (15%), Positives = 60/186 (32%), Gaps = 24/186 (12%)
Query: 235 GNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVP-------- 286
G+ + S + L G+ LS + + R A +
Sbjct: 2 GSSHHHHHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIE 61
Query: 287 -------------WEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTV 333
E + +L+L L P+ L +L+ +++ + +
Sbjct: 62 TRTGRALKATADLLEDATQPGRVALELRSVPLPQ-FPDQAFRLSHLQHMTIDAAGLM-EL 119
Query: 334 PESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFK 393
P+++ Q LE L + N +LP ++ ++LR + + +P + S +
Sbjct: 120 PDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGE 178
Query: 394 LILFSN 399
N
Sbjct: 179 HQGLVN 184
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 81.1 bits (201), Expect = 1e-16
Identities = 22/115 (19%), Positives = 40/115 (34%), Gaps = 1/115 (0%)
Query: 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFS 162
L L + ++ S I +L L LD+ ++P L L S
Sbjct: 208 LKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNL 266
Query: 163 GSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAEL 217
++P +I +L L+ L+L G +PS + + + +L
Sbjct: 267 LTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQLDQHRP 321
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 8e-05
Identities = 14/140 (10%), Positives = 32/140 (22%), Gaps = 23/140 (16%)
Query: 286 PWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSG-------------- 331
+ ++L + P + + + +
Sbjct: 5 HHHHHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRT 64
Query: 332 -----TVPESLVQL--PSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPD 384
+ L P L + + P+ R S L+ + + +P
Sbjct: 65 GRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDT 122
Query: 385 ICSGGVLFKLILFSNNFTGI 404
+ L L L N +
Sbjct: 123 MQQFAGLETLTLARNPLRAL 142
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 140 bits (355), Expect = 9e-37
Identities = 62/277 (22%), Positives = 111/277 (40%), Gaps = 19/277 (6%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
+L +L + N + + NLT+L L ++ +N S + +L + L+ +N
Sbjct: 87 LVKLTNLYIGTNKITD--ISALQNLTNLRELYLNEDNISD--ISPLANLTKMYSLNLGAN 142
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
S + +S + L L + S P + L L L N + D P L
Sbjct: 143 HNL-SDLSPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LAS 197
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
L ++ + N P + NM+ + L I ++ P L+NL++L L + N
Sbjct: 198 LTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTN 253
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339
Q++ +T LK L++ N++S +L L L L N++ E +
Sbjct: 254 QISD--INAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGG 309
Query: 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNN 376
L +L LF+ N+ + L SK+ D +
Sbjct: 310 LTNLTTLFLSQNHITDI--RPLASLSKMDSADFANQV 344
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 139 bits (354), Expect = 1e-36
Identities = 65/284 (22%), Positives = 123/284 (43%), Gaps = 19/284 (6%)
Query: 99 FFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFS 158
+ L LNL+ N + P + NL L +L I N + +Q+L NL L
Sbjct: 64 YLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD--ISALQNLTNLRELYLNE 119
Query: 159 NSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG 218
++ S P ++ L + LNL ++ S + L +L + + + D P +
Sbjct: 120 DNISDISP--LANLTKMYSLNLGANHNLS-DLSPLSNMTGLNYLTVTESKVKDVTP--IA 174
Query: 219 MLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFR 278
L + + + YN + P L +++ + Y ++ P ++N+T+L SL +
Sbjct: 175 NLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGN 230
Query: 279 NQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLV 338
N++ P + ++ L L++ N++S + DL L++L++ N++S L
Sbjct: 231 NKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISD--ISVLN 284
Query: 339 QLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIP 382
L L LF+ NN E +G + L + +S N+ P
Sbjct: 285 NLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP 328
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 138 bits (351), Expect = 2e-36
Identities = 68/305 (22%), Positives = 122/305 (40%), Gaps = 23/305 (7%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
E + L S + V L S+ L ++ + GI+ L NL L+ N
Sbjct: 21 LAEGIRAVLQKASVTD--VVTQEELESITKLVVAGEKVAS--IQGIEYLTNLEYLNLNGN 76
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ P +S L L L + + + S + +L L+L + ++D P L
Sbjct: 77 QITDISP--LSNLVKLTNLYIGTNKIT--DISALQNLTNLRELYLNEDNISDISP--LAN 130
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
L + + +G N ++ L NM+ + YL + + + P ++NLT L SL L N
Sbjct: 131 LTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYN 187
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339
Q+ P + +T+L N+++ P A++ L L + N+++ L
Sbjct: 188 QIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDL--SPLAN 241
Query: 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSN 399
L L L I N S + +KL+ ++V +N + + + L L L +N
Sbjct: 242 LSQLTWLEIGTNQISD--INAVKDLTKLKMLNVGSNQISD--ISVLNNLSQLNSLFLNNN 297
Query: 400 NFTGI 404
Sbjct: 298 QLGNE 302
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 137 bits (347), Expect = 1e-35
Identities = 63/302 (20%), Positives = 120/302 (39%), Gaps = 23/302 (7%)
Query: 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFS 162
L + FP +L I + + + + + L ++ L +
Sbjct: 2 AATLATLPAPINQIFPDA--DLAEGIRAVLQKASVTD--VVTQEELESITKLVVAGEKVA 57
Query: 163 GSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKT 222
S+ I L +L+ LNL G+ + P + L L++ N + D + L L
Sbjct: 58 -SIQG-IEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD--ISALQNLTN 111
Query: 223 VTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLA 282
+ + + + P L N++++ L++ N + S LSN+T L L + +++
Sbjct: 112 LRELYLNEDNISDISP--LANLTKMYSLNLGA-NHNLSDLSPLSNMTGLNYLTVTESKVK 168
Query: 283 GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPS 342
P + +T L SL L+ N++ P A L +L + N+++ + +
Sbjct: 169 DVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITD--ITPVANMTR 222
Query: 343 LEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFT 402
L L I NN + L S+L W+++ TN + I + L L + SN +
Sbjct: 223 LNSLKIGNNKITDL--SPLANLSQLTWLEIGTNQIS-DINA-VKDLTKLKMLNVGSNQIS 278
Query: 403 GI 404
I
Sbjct: 279 DI 280
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 3e-27
Identities = 52/228 (22%), Positives = 90/228 (39%), Gaps = 15/228 (6%)
Query: 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFS 162
+ LNL N + N+T L L ++ + I +L +L L N
Sbjct: 134 MYSLNLGANHNLS-DLSPLSNMTGLNYLTVTESKVKD--VTPIANLTDLYSLSLNYNQIE 190
Query: 163 GSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKT 222
P ++ L L + + P + L L + N + D P L L
Sbjct: 191 DISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQ 244
Query: 223 VTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLA 282
+T +EIG N +I + ++++++ L++ +S L+NL++L SLFL NQL
Sbjct: 245 LTWLEIGTNQIS-DIN-AVKDLTKLKMLNVGSNQISD--ISVLNNLSQLNSLFLNNNQLG 300
Query: 283 GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS 330
+ +T L +L LS N ++ P A L + +
Sbjct: 301 NEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 144 bits (366), Expect = 1e-36
Identities = 62/283 (21%), Positives = 103/283 (36%), Gaps = 12/283 (4%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
+ ++L+ S + ++ SL I R FP L L L N
Sbjct: 284 LANVSAMSLAGVSIK--YLEDVPKHFKWQSLSIIRCQLK-QFPT--LDLPFLKSLTLTMN 338
Query: 160 SFSGSVPAEISQLEHLKVLNLAGS--YFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAEL 217
GS+ + L L L+L+ + FSG SL L L+ N + A
Sbjct: 339 K--GSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANF 395
Query: 218 GMLKTVTHMEIGYNFYQGNIPWQ-LGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFL 276
L+ + H++ ++ + + ++ ++ YLDI+ N LT L +L +
Sbjct: 396 MGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKM 455
Query: 277 FRNQLAGQVPWE-FSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPE 335
N F+ T L LDLS +L F L L+LL++ +N +
Sbjct: 456 AGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSS 515
Query: 336 SLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFN 378
QL SL L N S L + +++ N+
Sbjct: 516 HYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVA 558
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 1e-35
Identities = 53/303 (17%), Positives = 104/303 (34%), Gaps = 14/303 (4%)
Query: 105 DLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGS 164
+ L++ + V+ L ++ ++ ++ + + + L
Sbjct: 265 EFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIK--YLEDVPKHFKWQSLSIIRCQLK-Q 321
Query: 165 VPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV- 223
P L LK L L + G I + + SL +L L+ N L+ L T
Sbjct: 322 FPT--LDLPFLKSLTL--TMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNS 377
Query: 224 -THMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE-LSNLTKLESLFLFRNQL 281
H+++ +N + + E+Q+LD + L +L KL L +
Sbjct: 378 LRHLDLSFN-GAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNT 436
Query: 282 AGQVPWEFSRVTTLKSLDLSDNRLSGPIPES-FADLKNLRLLSLMYNEMSGTVPESLVQL 340
F +T+L +L ++ N + FA+ NL L L ++ L
Sbjct: 437 KIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTL 496
Query: 341 PSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGV-LFKLILFSN 399
L++L + +N + + L +D S N + + L L +N
Sbjct: 497 HRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNN 555
Query: 400 NFT 402
+
Sbjct: 556 SVA 558
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 4e-32
Identities = 45/319 (14%), Positives = 96/319 (30%), Gaps = 41/319 (12%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
+ +++LS N N + L LD+SR L +L L N
Sbjct: 31 PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGN 90
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
P S L L+ L + + G +L+ L++A N ++
Sbjct: 91 PIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHS-------- 142
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKL----ESLF 275
+P N++ + ++D++ + +L L + SL
Sbjct: 143 ---------------CKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLD 187
Query: 276 LFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPE-SFADLKNLRLLSLMYNEMSG--- 331
+ N + + + + L L L N S I + +L L + L+ E
Sbjct: 188 MSLNPI-DFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERN 246
Query: 332 ------TVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDI 385
++ E L + +++ + + + + ++ + D+
Sbjct: 247 LEIFEPSIMEGLCDV-TIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKY--LEDV 303
Query: 386 CSGGVLFKLILFSNNFTGI 404
L +
Sbjct: 304 PKHFKWQSLSIIRCQLKQF 322
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 2e-31
Identities = 70/339 (20%), Positives = 122/339 (35%), Gaps = 40/339 (11%)
Query: 103 LVDLNLSHNSFSG-QFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNL----LVLDAF 157
L LN++HN + P NLT+L+ +D+S N +Q LR L LD
Sbjct: 130 LKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMS 189
Query: 158 SNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPS-QFGSFKSLEFLHLAGNLLNDQIPAE 216
N + + Q L L L G++ S I + L L D+ E
Sbjct: 190 LNPID-FIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLE 248
Query: 217 LGMLKT--------VTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNL 268
+ + + Y + + ++ V + +AG ++ +++
Sbjct: 249 IFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKY--LEDVPKH 306
Query: 269 TKLESLFLFRNQLA-------------------GQVPWEFSRVTTLKSLDLSDNRLSGPI 309
K +SL + R QL G + ++ + +L LDLS N LS
Sbjct: 307 FKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSG 366
Query: 310 PESFADLK--NLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN-SK 366
S++DL +LR L L +N + + + L L+ L ++ + + K
Sbjct: 367 CCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEK 425
Query: 367 LRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIV 405
L ++D+S N L L + N+F
Sbjct: 426 LLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNT 464
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 8e-24
Identities = 42/209 (20%), Positives = 86/209 (41%), Gaps = 7/209 (3%)
Query: 202 LHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261
L+ ++P ++ + ++++ +N + + N SE+Q+LD++ +
Sbjct: 16 YQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIE 72
Query: 262 PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRL 321
K L L +L L N + P FS +T+L++L + +L+ L L+
Sbjct: 73 DKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKK 132
Query: 322 LSLMYNEMSG-TVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVS---TNNF 377
L++ +N + +P L +L + + NY +L + V++S + N
Sbjct: 133 LNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNP 192
Query: 378 NGSIPPDICSGGVLFKLILFSNNFTGIVM 406
I G L +L L N + +M
Sbjct: 193 IDFIQDQAFQGIKLHELTLRGNFNSSNIM 221
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 136 bits (346), Expect = 7e-36
Identities = 75/290 (25%), Positives = 110/290 (37%), Gaps = 83/290 (28%)
Query: 464 KAVLPTGITVSVKKIEWGATRIKIVS-----EFITRIGT---VRHKNLIRLLGFCYNRHQ 515
K VL G V++K R S EF T I T RH +L+ L+GFC R++
Sbjct: 57 KGVLRDGAKVALK-------RRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNE 109
Query: 516 AYLLYDYLPNGNL------SEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLK 569
L+Y Y+ NGNL S+ W + +I +G ARGL +LH I H D+K
Sbjct: 110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVK 166
Query: 570 ASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTES---------GEF-YNAMKEEM 619
+ NI+ DEN P + +FG +K G Y + E
Sbjct: 167 SINILLDENFVPKITDFGI------------SKKGTELDQTHLSTVVKGTLGY--IDPEY 212
Query: 620 YM--------DVYGFGEIILEILTNGRLTN-------------AGSSLQNKPIDGL---- 654
++ DVY FG ++ E+L A S N ++ +
Sbjct: 213 FIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPN 272
Query: 655 LGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSG 704
L + + + D A+ C + DRPSM + L L
Sbjct: 273 LADKIRPESL----------RKFGDTAVKCLALSSEDRPSMGDVLWKLEY 312
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 1e-34
Identities = 60/297 (20%), Positives = 113/297 (38%), Gaps = 18/297 (6%)
Query: 101 NELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
N ++ +S Q + + ++ LD+S N S + L +L+ SN
Sbjct: 10 NRYKIEKVTDSSLK-QALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSN 68
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
++ L L+ L+L +Y + S+E LH A N ++ +
Sbjct: 69 VLYE--TLDLESLSTLRTLDLNNNYV-----QELLVGPSIETLHAANNNISR-VSCSR-- 118
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG-SIPKELSNLTKLESLFLFR 278
+ ++ + N G S VQYLD+ + + + ++ LE L L
Sbjct: 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQY 178
Query: 279 NQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLV 338
N + LK+LDLS N+L+ + F + +SL N++ + ++L
Sbjct: 179 NFIYDVKGQVV--FAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALR 234
Query: 339 QLPSLEILFIWNNYFS-GSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKL 394
+LE + N F G+L + +N +++ V T + C+ L
Sbjct: 235 FSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTLGHY 291
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 5e-33
Identities = 43/287 (14%), Positives = 95/287 (33%), Gaps = 17/287 (5%)
Query: 120 EIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 178
EI N ++ ++ QS N+ LD N S A+++ L++L
Sbjct: 4 EIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELL 63
Query: 179 NLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIP 238
NL+ + + S +L L L N + EL + ++ + N +
Sbjct: 64 NLSSNVLYETLD--LESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNIS-RVS 115
Query: 239 WQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAG-QVPWEFSRVTTLKS 297
+ + +A ++ + ++++ L L N++ + TL+
Sbjct: 116 --CSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEH 173
Query: 298 LDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSL 357
L+L N + + L+ L L N+++ + + + + NN +
Sbjct: 174 LNLQYNFIYD-VKGQ-VVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LI 229
Query: 358 PENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGI 404
+ L + L D+ N F+ + +
Sbjct: 230 EKALRFSQNLEHFDLRGNGFH-CGTLRDFFSKNQRVQTVAKQTVKKL 275
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 1e-25
Identities = 46/242 (19%), Positives = 96/242 (39%), Gaps = 14/242 (5%)
Query: 164 SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV 223
++ K+ + S + S S +++ L L+GN L+ A+L +
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 224 THMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAG 283
+ + N L ++S ++ LD+ + EL +E+L N ++
Sbjct: 61 ELLNLSSNVLY-ETL-DLESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNIS- 112
Query: 284 QVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSG-TVPESLVQLPS 342
+V SR K++ L++N+++ ++ L L NE+ E +
Sbjct: 113 RVS--CSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDT 170
Query: 343 LEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFT 402
LE L + N+ + + +KL+ +D+S+N + P+ S + + L +N
Sbjct: 171 LEHLNLQYNFIY-DVKGQVV-FAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV 227
Query: 403 GI 404
I
Sbjct: 228 LI 229
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 3e-17
Identities = 29/208 (13%), Positives = 69/208 (33%), Gaps = 11/208 (5%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG-HFPGGIQSLRNLLVLDAFS 158
++ L++N + ++ + + LD+ N +F S L L+
Sbjct: 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQY 178
Query: 159 NSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG 218
N V ++ LK L+L+ + + + +F S + ++ L N L I L
Sbjct: 179 NFIY-DVKGQV-VFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALR 234
Query: 219 MLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFR 278
+ + H ++ N + G + + + ++ K+L+ + E
Sbjct: 235 FSQNLEHFDLRGN------GFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTL 288
Query: 279 NQLAGQVPWEFSRVTTLKSLDLSDNRLS 306
+ + + L +
Sbjct: 289 GHYGAYCCEDLPAPFADRLIALGHHHHH 316
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 2e-09
Identities = 20/121 (16%), Positives = 41/121 (33%), Gaps = 4/121 (3%)
Query: 95 PLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVL 154
++ F +L L+LS N + E + + + + N ++ +NL
Sbjct: 185 KGQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHF 242
Query: 155 DAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP 214
D N F ++ +V +A + Q ++ L G + +P
Sbjct: 243 DLRGNGFH-CGTLRDFFSKNQRVQTVAKQTVKK-LTGQNEEECTVPTLGHYGAYCCEDLP 300
Query: 215 A 215
A
Sbjct: 301 A 301
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 3e-34
Identities = 71/305 (23%), Positives = 124/305 (40%), Gaps = 25/305 (8%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
+++ L + L +L ++ S N + P +++L L+ + +N
Sbjct: 45 LDQVTTLQADRLGIKS--IDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNN 100
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ P ++ L +L L L + + P + +L L L+ N ++D + L
Sbjct: 101 QIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD--ISALSG 154
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
L ++ + G P L N++ ++ LDI+ +S L+ LT LESL N
Sbjct: 155 LTSLQQLSFGNQV-TDLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNN 209
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339
Q++ P +T L L L+ N+L + A L NL L L N++S L
Sbjct: 210 QISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISN--LAPLSG 263
Query: 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSN 399
L L L + N S L + L ++++ N P I + L L L+ N
Sbjct: 264 LTKLTELKLGANQISNI--SPLAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFN 319
Query: 400 NFTGI 404
N + I
Sbjct: 320 NISDI 324
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 1e-33
Identities = 65/304 (21%), Positives = 115/304 (37%), Gaps = 21/304 (6%)
Query: 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFS 162
L L++S N S + LT+L SL + N S P + L NL L N
Sbjct: 179 LERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK 234
Query: 163 GSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKT 222
++ L +L L+LA + S P L L L N +++ P L L
Sbjct: 235 D--IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTA 288
Query: 223 VTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLA 282
+T++E+ N + P + N+ + YL + N+S P +S+LTKL+ LF + N+++
Sbjct: 289 LTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVS 344
Query: 283 GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPS 342
+ +T + L N++S P A+L + L L + +
Sbjct: 345 D--VSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSI 400
Query: 343 LEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFT 402
+ + P + D++ N + + + + F+
Sbjct: 401 PNTVKNVTG--ALIAPATISDGGSYTEPDITWNLPS-YTNEVSYTFSQPVTIGKGTTTFS 457
Query: 403 GIVM 406
G V
Sbjct: 458 GTVT 461
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 2e-33
Identities = 69/303 (22%), Positives = 120/303 (39%), Gaps = 25/303 (8%)
Query: 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSF 161
E + L + + V +L + +L R G++ L NL ++ +N
Sbjct: 25 EKMKTVLGKTNVTD--TVSQTDLDQVTTLQADRLGIKS--IDGVEYLNNLTQINFSNNQL 80
Query: 162 SGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLK 221
+ P + L L + + + + P + +L L L N + D P L L
Sbjct: 81 TDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLT 134
Query: 222 TVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQL 281
+ +E+ N L ++ +Q L G ++ P L+NLT LE L + N++
Sbjct: 135 NLNRLELSSNTISDISA--LSGLTSLQQLSF-GNQVTDLKP--LANLTTLERLDISSNKV 189
Query: 282 AGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLP 341
+ +++T L+SL ++N++S P L NL LSL N++ +L L
Sbjct: 190 SD--ISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLT 243
Query: 342 SLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNF 401
+L L + NN S L +KL + + N + P + L L L N
Sbjct: 244 NLTDLDLANNQISNL--APLSGLTKLTELKLGANQISNISPLAGLTA--LTNLELNENQL 299
Query: 402 TGI 404
I
Sbjct: 300 EDI 302
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 123 bits (312), Expect = 3e-30
Identities = 62/297 (20%), Positives = 110/297 (37%), Gaps = 25/297 (8%)
Query: 108 LSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPA 167
+ F L + + + N + L + L A
Sbjct: 9 TQDTPINQIFTDT--ALAEKMKTVLGKTNVTD--TVSQTDLDQVTTLQADRLGIKS--ID 62
Query: 168 EISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHME 227
+ L +L +N + + + P + L + + N + D P L L +T +
Sbjct: 63 GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118
Query: 228 IGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPW 287
+ N P L N++ + L+++ +S LS LT L+ L NQ+ P
Sbjct: 119 LFNNQITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSF-GNQVTDLKP- 172
Query: 288 EFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILF 347
+ +TTL+ LD+S N++S A L NL L N++S L L +L+ L
Sbjct: 173 -LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISD--ITPLGILTNLDELS 227
Query: 348 IWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGI 404
+ N L + L +D++ N + P + L +L L +N + I
Sbjct: 228 LNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTK--LTELKLGANQISNI 280
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 8e-04
Identities = 15/88 (17%), Positives = 30/88 (34%), Gaps = 4/88 (4%)
Query: 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS 160
+ L+ HN S P + NLT + L ++ ++ P ++ ++
Sbjct: 353 TNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN-APVNYKANVSIPNTVKNVTG 409
Query: 161 FSGSVPAEISQLEHLKVLNLAGSYFSGP 188
PA IS ++ + S
Sbjct: 410 AL-IAPATISDGGSYTEPDITWNLPSYT 436
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 2e-33
Identities = 59/304 (19%), Positives = 114/304 (37%), Gaps = 21/304 (6%)
Query: 101 NELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
N ++ +S Q + + ++ LD+S N S + L +L+ SN
Sbjct: 10 NRYKIEKVTDSSLK-QALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSN 68
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
++ L L+ L+L +Y + S+E LH A N ++ +
Sbjct: 69 VLYE--TLDLESLSTLRTLDLNNNYV-----QELLVGPSIETLHAANNNISR-VSCS--R 118
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG-SIPKELSNLTKLESLFLFR 278
+ ++ + N G S VQYLD+ + + + ++ LE L L
Sbjct: 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQY 178
Query: 279 NQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLV 338
N + V + LK+LDLS N+L+ + F + +SL N++ + ++L
Sbjct: 179 NFIY-DVKGQVV-FAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALR 234
Query: 339 QLPSLEILFIWNNYFS-GSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILF 397
+LE + N F G+L + +N +++ V + + L +
Sbjct: 235 FSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVA---KQTVKKLTGQNEEECTVPTLGHY 291
Query: 398 SNNF 401
Sbjct: 292 GAYC 295
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 1e-31
Identities = 45/287 (15%), Positives = 97/287 (33%), Gaps = 17/287 (5%)
Query: 120 EIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 178
EI N ++ ++ QS N+ LD N S A+++ L++L
Sbjct: 4 EIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELL 63
Query: 179 NLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIP 238
NL+ + + S +L L L N + EL + ++ + N +
Sbjct: 64 NLSSNVLYETLD--LESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNIS-RVS 115
Query: 239 WQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAG-QVPWEFSRVTTLKS 297
+ + +A ++ + ++++ L L N++ + TL+
Sbjct: 116 --CSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEH 173
Query: 298 LDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSL 357
L+L N + + L+ L L N+++ + + + + NN +
Sbjct: 174 LNLQYNFIYD-VKGQ-VVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LI 229
Query: 358 PENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGI 404
+ L + L D+ N F+ D S + +
Sbjct: 230 EKALRFSQNLEHFDLRGNGFHCGTLRDFFSKN-QRVQTVAKQTVKKL 275
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 104 bits (260), Expect = 1e-23
Identities = 36/275 (13%), Positives = 85/275 (30%), Gaps = 12/275 (4%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG-HFPGGIQSLRNLLVLDAFS 158
++ L++N + ++ + + LD+ N +F S L L+
Sbjct: 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQY 178
Query: 159 NSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG 218
N V ++ LK L+L+ + + + +F S + ++ L N L I L
Sbjct: 179 NFIY-DVKGQV-VFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALR 234
Query: 219 MLKTVTHMEIGYN-FYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLF 277
+ + H ++ N F+ G + VQ + + + T
Sbjct: 235 FSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAK--QTVKKLTGQNEEECTVPTLGHYG 292
Query: 278 RNQLAGQVPWEFSRVTTLKSLDLSDNRLSG----PIPESFADLKNLRLLSLMYNEMSGTV 333
R+ LK + + G + + R + + + +
Sbjct: 293 AYCCEDLPAPFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALKEQYRTVI 352
Query: 334 PESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLR 368
+ ++ + L + +++L
Sbjct: 353 DQVTLRKQAKITLEQKKKALDEQVSNGRRAHAELD 387
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 95.3 bits (237), Expect = 9e-21
Identities = 39/280 (13%), Positives = 89/280 (31%), Gaps = 13/280 (4%)
Query: 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFS 162
L LNL +N ++ L +LD+S N + QS + + +N
Sbjct: 171 LEHLNLQYNFIY-DVKGQVV-FAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV 227
Query: 163 GSVPAEISQLEHLKVLNLAGSYFS-GPIPSQFGSFKSLEFLHLAGN-LLNDQIPAELGML 220
+ + ++L+ +L G+ F G + F + ++ + L Q E +
Sbjct: 228 -LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVP 286
Query: 221 KTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAG-ANLSGSIPKELSNLTKLESLFLFRN 279
+ +L + ++ ++G + + + E N + + +
Sbjct: 287 TLGHYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALKE 346
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLR---LLSLMYNEMSGTVPES 336
Q + R +L+ L + L ++ E+ E
Sbjct: 347 QYRTVIDQVTLRKQAKITLEQKKKALDEQVSNGRRAHAELDGTLQQAVGQIELQH-ATEE 405
Query: 337 LVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNN 376
L L + Y + + +N+ +R D+ +
Sbjct: 406 QSPLQLLRAIV--KRYEEMYVEQQSVQNNAIRDWDMYQHK 443
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 85.3 bits (211), Expect = 1e-17
Identities = 36/238 (15%), Positives = 82/238 (34%), Gaps = 32/238 (13%)
Query: 189 IPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQ 248
I + + + + L + + V +++ N L ++++
Sbjct: 2 IHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLE 61
Query: 249 YLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLS-- 306
L+++ L +L +L+ L +L L N + E ++++L ++N +S
Sbjct: 62 LLNLSSNVLY-ETL-DLESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNISRV 114
Query: 307 -------------------GPIPESFADLKNLRLLSLMYNEMSG-TVPESLVQLPSLEIL 346
++ L L NE+ E +LE L
Sbjct: 115 SCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHL 174
Query: 347 FIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGI 404
+ N+ + + +KL+ +D+S+N + P+ S + + L +N I
Sbjct: 175 NLQYNFIY-DVKGQVV-FAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLVLI 229
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 83.4 bits (206), Expect = 6e-17
Identities = 31/145 (21%), Positives = 51/145 (35%), Gaps = 10/145 (6%)
Query: 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNL 319
+I + N + + + + L + +K LDLS N LS A L
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 320 RLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNG 379
LL+L N + L L +L L + NNY L + + + NN +
Sbjct: 61 ELLNLSSNVLYE--TLDLESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNIS- 112
Query: 380 SIPPDICSGGVLFKLILFSNNFTGI 404
+ G + L +N T +
Sbjct: 113 RVSCSRGQG--KKNIYLANNKITML 135
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 4e-33
Identities = 61/305 (20%), Positives = 116/305 (38%), Gaps = 22/305 (7%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFS 158
F ++ LNL+ + F ++ L + N P Q++ L VL
Sbjct: 68 FRQVELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLER 126
Query: 159 NSFSGSVPAEI-SQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAEL 217
N S S+P I L L+++ + F + SL+ L L+ N L + L
Sbjct: 127 NDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH-VD--L 182
Query: 218 GMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLF 277
++ ++ H + YN L V+ LD + +++ + + +L L L
Sbjct: 183 SLIPSLFHANVSYNLLS-----TLAIPIAVEELDASHNSIN-VVRGPV--NVELTILKLQ 234
Query: 278 RNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESL 337
N L W L +DLS N L + F ++ L L + N + +
Sbjct: 235 HNNLT-DTAW-LLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYG 291
Query: 338 VQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILF 397
+P+L++L + +N+ + N + +L + + N+ ++ L L L
Sbjct: 292 QPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLKLSTHHT--LKNLTLS 347
Query: 398 SNNFT 402
N++
Sbjct: 348 HNDWD 352
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 5e-30
Identities = 52/327 (15%), Positives = 113/327 (34%), Gaps = 21/327 (6%)
Query: 81 NLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSG 139
++ + + + I N + +++ + P + + + L+++
Sbjct: 25 DVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEE 83
Query: 140 HFPGGIQSLRNLLVLDAFSNSFSGSVPAEI-SQLEHLKVLNLAGSYFSGPIPSQFGSFKS 198
+ L N+ +P + + L VL L + S F +
Sbjct: 84 IDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPK 142
Query: 199 LEFLHLAGNLLNDQIPAELGM-LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANL 257
L L ++ N L +I + ++ ++++ N ++ L + + + +++ L
Sbjct: 143 LTTLSMSNNNLE-RIEDDTFQATTSLQNLQLSSNRLT-HVD--LSLIPSLFHANVSYNLL 198
Query: 258 SGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLK 317
S L+ +E L N + L L L N L+ +
Sbjct: 199 S-----TLAIPIAVEELDASHNSINVVRGPVNVE---LTILKLQHNNLT-DTA-WLLNYP 248
Query: 318 NLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNF 377
L + L YNE+ + V++ LE L+I NN +L L+ +D+S N+
Sbjct: 249 GLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHL 307
Query: 378 NGSIPPDICSGGVLFKLILFSNNFTGI 404
+ + L L L N+ +
Sbjct: 308 L-HVERNQPQFDRLENLYLDHNSIVTL 333
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 94.7 bits (236), Expect = 5e-21
Identities = 52/268 (19%), Positives = 87/268 (32%), Gaps = 39/268 (14%)
Query: 142 PGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEF 201
+Q + + E L + K++ S + SF+ +E
Sbjct: 14 DSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVEL 73
Query: 202 LHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261
L+L + + I +Q L + + +
Sbjct: 74 LNLNDLQIEE-IDTYA-----------------------FAYAHTIQKLYMGFNAIR-YL 108
Query: 262 PKE-LSNLTKLESLFLFRNQLAGQVPWE-FSRVTTLKSLDLSDNRLSGPIPESFADLKNL 319
P N+ L L L RN L+ +P F L +L +S+N L ++F +L
Sbjct: 109 PPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSL 167
Query: 320 RLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNG 379
+ L L N ++ V SL +PSL + N S L + +D S N+ N
Sbjct: 168 QNLQLSSNRLT-HVDLSL--IPSLFHANVSYNLLS-----TLAIPIAVEELDASHNSIN- 218
Query: 380 SIPPDICSGGVLFKLILFSNNFTGIVMF 407
+ + L L L NN T
Sbjct: 219 VVRGPVNVE--LTILKLQHNNLTDTAWL 244
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 93.6 bits (233), Expect = 2e-20
Identities = 52/292 (17%), Positives = 107/292 (36%), Gaps = 23/292 (7%)
Query: 118 PVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEI-SQLEHLK 176
+ + I +F +L N ++ +++ +PA + ++
Sbjct: 14 DSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVE 72
Query: 177 VLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM-LKTVTHMEIGYNFYQG 235
+LNL F +++ L++ N + +P + + +T + + N
Sbjct: 73 LLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAI-RYLPPHVFQNVPLLTVLVLERNDLS- 130
Query: 236 NIPWQL-GNMSEVQYLDIAGANLSGSIPKE-LSNLTKLESLFLFRNQLAGQVPWEFSRVT 293
++P + N ++ L ++ NL I + T L++L L N+L V S +
Sbjct: 131 SLPRGIFHNTPKLTTLSMSNNNLE-RIEDDTFQATTSLQNLQLSSNRLT-HVD--LSLIP 186
Query: 294 TLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYF 353
+L ++S N LS + A + L +N ++ V + L IL + +N
Sbjct: 187 SLFHANVSYNLLS-----TLAIPIAVEELDASHNSIN-VVRGPV--NVELTILKLQHNNL 238
Query: 354 SGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSG-GVLFKLILFSNNFTGI 404
+ L L VD+S N I L +L + +N +
Sbjct: 239 T-DTA-WLLNYPGLVEVDLSYNELE-KIMYHPFVKMQRLERLYISNNRLVAL 287
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 1e-12
Identities = 22/147 (14%), Positives = 51/147 (34%), Gaps = 4/147 (2%)
Query: 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNL 319
I L + + +E + K + ++ + + +
Sbjct: 12 CIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQV 71
Query: 320 RLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN-SKLRWVDVSTNNFN 378
LL+L ++ + +++ L++ N LP ++ +N L + + N+ +
Sbjct: 72 ELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLS 130
Query: 379 GSIPPDICSG-GVLFKLILFSNNFTGI 404
S+P I L L + +NN I
Sbjct: 131 -SLPRGIFHNTPKLTTLSMSNNNLERI 156
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 7e-32
Identities = 61/305 (20%), Positives = 116/305 (38%), Gaps = 22/305 (7%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFS 158
F ++ LNL+ + F ++ L + N P Q++ L VL
Sbjct: 74 FRQVELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLER 132
Query: 159 NSFSGSVPAEI-SQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAEL 217
N S S+P I L L+++ + F + SL+ L L+ N L + L
Sbjct: 133 NDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH-VD--L 188
Query: 218 GMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLF 277
++ ++ H + YN L V+ LD + +++ + + +L L L
Sbjct: 189 SLIPSLFHANVSYNLLS-----TLAIPIAVEELDASHNSIN-VVRGPV--NVELTILKLQ 240
Query: 278 RNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESL 337
N L W L +DLS N L + F ++ L L + N + +
Sbjct: 241 HNNLT-DTAW-LLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYG 297
Query: 338 VQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILF 397
+P+L++L + +N+ + N + +L + + N+ ++ L L L
Sbjct: 298 QPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLKLSTHHT--LKNLTLS 353
Query: 398 SNNFT 402
N++
Sbjct: 354 HNDWD 358
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 121 bits (304), Expect = 7e-29
Identities = 52/327 (15%), Positives = 113/327 (34%), Gaps = 21/327 (6%)
Query: 81 NLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSG 139
++ + + + I N + +++ + P + + + L+++
Sbjct: 31 DVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEE 89
Query: 140 HFPGGIQSLRNLLVLDAFSNSFSGSVPAEI-SQLEHLKVLNLAGSYFSGPIPSQFGSFKS 198
+ L N+ +P + + L VL L + S F +
Sbjct: 90 IDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPK 148
Query: 199 LEFLHLAGNLLNDQIPAELGM-LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANL 257
L L ++ N L +I + ++ ++++ N ++ L + + + +++ L
Sbjct: 149 LTTLSMSNNNLE-RIEDDTFQATTSLQNLQLSSNRLT-HVD--LSLIPSLFHANVSYNLL 204
Query: 258 SGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLK 317
S L+ +E L N + L L L N L+ +
Sbjct: 205 S-----TLAIPIAVEELDASHNSINVVRGPVNVE---LTILKLQHNNLT-DTA-WLLNYP 254
Query: 318 NLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNF 377
L + L YNE+ + V++ LE L+I NN +L L+ +D+S N+
Sbjct: 255 GLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHL 313
Query: 378 NGSIPPDICSGGVLFKLILFSNNFTGI 404
+ + L L L N+ +
Sbjct: 314 L-HVERNQPQFDRLENLYLDHNSIVTL 339
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 93.5 bits (232), Expect = 5e-20
Identities = 51/267 (19%), Positives = 85/267 (31%), Gaps = 37/267 (13%)
Query: 142 PGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEF 201
+Q + + E L + K++ S + SF+ +E
Sbjct: 20 DSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVEL 79
Query: 202 LHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261
L+L + + I +Q L + + +
Sbjct: 80 LNLNDLQIEE-IDTYA-----------------------FAYAHTIQKLYMGFNAIR-YL 114
Query: 262 PKE-LSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLR 320
P N+ L L L RN L+ F L +L +S+N L ++F +L+
Sbjct: 115 PPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQ 174
Query: 321 LLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGS 380
L L N ++ V SL +PSL + N S L + +D S N+ N
Sbjct: 175 NLQLSSNRLT-HVDLSL--IPSLFHANVSYNLLS-----TLAIPIAVEELDASHNSIN-V 225
Query: 381 IPPDICSGGVLFKLILFSNNFTGIVMF 407
+ + L L L NN T
Sbjct: 226 VRGPVNVE--LTILKLQHNNLTDTAWL 250
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 92.3 bits (229), Expect = 1e-19
Identities = 53/311 (17%), Positives = 109/311 (35%), Gaps = 61/311 (19%)
Query: 118 PVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEI-SQLEHLK 176
+ + I +F +L N ++ +++ +PA + ++
Sbjct: 20 DSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVE 78
Query: 177 VLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGN 236
+LNL F +++ L++ N + +P +
Sbjct: 79 LLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAI-RYLPPHV------------------- 118
Query: 237 IPWQLGNMSEVQYLDIAGANLSGSIPKEL-SNLTKLESLFLFRNQLAGQVPWE-FSRVTT 294
N+ + L + +LS S+P+ + N KL +L + N L ++ + F T+
Sbjct: 119 ----FQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLE-RIEDDTFQATTS 172
Query: 295 LKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFS 354
L++L LS NRL+ + + + +L ++ YN +S +L ++E L +N +
Sbjct: 173 LQNLQLSSNRLTH-VD--LSLIPSLFHANVSYNLLS-----TLAIPIAVEELDASHNSIN 224
Query: 355 GSLPE---------NLGRN-----------SKLRWVDVSTNNFNGSIPPDICSG-GVLFK 393
+ L N L VD+S N I L +
Sbjct: 225 -VVRGPVNVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELE-KIMYHPFVKMQRLER 282
Query: 394 LILFSNNFTGI 404
L + +N +
Sbjct: 283 LYISNNRLVAL 293
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 68.8 bits (168), Expect = 3e-12
Identities = 22/147 (14%), Positives = 51/147 (34%), Gaps = 4/147 (2%)
Query: 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNL 319
I L + + +E + K + ++ + + +
Sbjct: 18 CIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQV 77
Query: 320 RLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN-SKLRWVDVSTNNFN 378
LL+L ++ + +++ L++ N LP ++ +N L + + N+ +
Sbjct: 78 ELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLS 136
Query: 379 GSIPPDICSG-GVLFKLILFSNNFTGI 404
S+P I L L + +NN I
Sbjct: 137 -SLPRGIFHNTPKLTTLSMSNNNLERI 162
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 1e-30
Identities = 64/308 (20%), Positives = 116/308 (37%), Gaps = 10/308 (3%)
Query: 99 FFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFS 158
E L+L N E + L L+++ N S PG +L NL L S
Sbjct: 30 IPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89
Query: 159 NSFSGSVPAEI-SQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAE- 216
N +P + + L +L L+++ + + F +L+ L + N L I
Sbjct: 90 NRLK-LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV-YISHRA 147
Query: 217 LGMLKTVTHMEIGYNFYQGNIPWQ-LGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLF 275
L ++ + + +IP + L ++ + L + N++ L +L+ L
Sbjct: 148 FSGLNSLEQLTLEKCNLT-SIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLE 206
Query: 276 LFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPE 335
+ + L SL ++ L+ + L LR L+L YN +S
Sbjct: 207 ISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGS 266
Query: 336 SLVQLPSLEILFIWNNYFSGSLPENLGRN-SKLRWVDVSTNNFNGSIPPDICSG-GVLFK 393
L +L L+ + + + + R + LR ++VS N ++ + G L
Sbjct: 267 MLHELLRLQEIQLVGGQLA-VVEPYAFRGLNYLRVLNVSGNQLT-TLEESVFHSVGNLET 324
Query: 394 LILFSNNF 401
LIL SN
Sbjct: 325 LILDSNPL 332
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 1e-27
Identities = 61/258 (23%), Positives = 103/258 (39%), Gaps = 10/258 (3%)
Query: 102 ELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS 160
L L L N P+ +F L++L LDIS N Q L NL L+ N
Sbjct: 81 NLRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDND 139
Query: 161 FSGSVPAEI-SQLEHLKVLNLAGSYFSGPIPSQ-FGSFKSLEFLHLAGNLLNDQIPAELG 218
+ S L L+ L L + IP++ L L L +N
Sbjct: 140 LV-YISHRAFSGLNSLEQLTLEKCNLTS-IPTEALSHLHGLIVLRLRHLNINAIRDYSFK 197
Query: 219 MLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE-LSNLTKLESLFLF 277
L + +EI + Y + + L I NL+ ++P + +L L L L
Sbjct: 198 RLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT-AVPYLAVRHLVYLRFLNLS 256
Query: 278 RNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESL 337
N ++ + L+ + L +L+ P +F L LR+L++ N+++ T+ ES+
Sbjct: 257 YNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLT-TLEESV 315
Query: 338 VQ-LPSLEILFIWNNYFS 354
+ +LE L + +N +
Sbjct: 316 FHSVGNLETLILDSNPLA 333
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 3e-23
Identities = 49/243 (20%), Positives = 95/243 (39%), Gaps = 30/243 (12%)
Query: 164 SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV 223
+VP I ++L+L + +F SF LE L L N+++ +
Sbjct: 25 AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSA-VEPGA------ 75
Query: 224 THMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE-LSNLTKLESLFLFRNQLA 282
N+ ++ L + L IP + L+ L L + N++
Sbjct: 76 -----------------FNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIV 117
Query: 283 GQVPWE-FSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLP 341
+ F + LKSL++ DN L +F+ L +L L+L ++ E+L L
Sbjct: 118 -ILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLH 176
Query: 342 SLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNF 401
L +L + + + + R +L+ +++S + ++ P+ G L L + N
Sbjct: 177 GLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNL 236
Query: 402 TGI 404
T +
Sbjct: 237 TAV 239
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 5e-30
Identities = 53/296 (17%), Positives = 104/296 (35%), Gaps = 86/296 (29%)
Query: 470 GITVSVKKIEWGATRIKIVSEF-ITRIGTVRHKNLIRLLGFC----YNRHQAYLLYDYLP 524
V+VK + +E+ + + ++H+N+++ +G +L+ +
Sbjct: 47 NEYVAVKIFPIQDKQ-SWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHE 105
Query: 525 NGNLSEKIRTKR-DWAAKYKIVLGVARGLCFLHHDCY-------PAIPHGDLKASNIVFD 576
G+LS+ ++ W I +ARGL +LH D PAI H D+K+ N++
Sbjct: 106 KGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLK 165
Query: 577 ENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEM----YM----------- 621
N+ +A+FG A E+G+ ++ YM
Sbjct: 166 NNLTACIADFGL------------ALK--FEAGKSAGDTHGQVGTRRYMAPEVLEGAINF 211
Query: 622 --------DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGE--MYNENEVGSSSSLQ 671
D+Y G ++ E+ + + DG + E + E E+G SL+
Sbjct: 212 QRDAFLRIDMYAMGLVLWELAS-----------RCTAADGPVDEYMLPFEEEIGQHPSLE 260
Query: 672 DEIKLVL----------------------DVALLCTRSTPSDRPSMEEALKLLSGL 705
D ++V+ + C R S + ++ +
Sbjct: 261 DMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQM 316
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 1e-29
Identities = 65/336 (19%), Positives = 117/336 (34%), Gaps = 55/336 (16%)
Query: 69 KCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLI 128
C N V +N+ GL+ LP + L + N+ + P L +L
Sbjct: 36 ACLNNGNAV--LNVGESGLT-TLPDC----LPAHITTLVIPDNNLT-SLPALPPELRTL- 86
Query: 129 SLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGP 188
++S N + P L L + + L L + G+ +
Sbjct: 87 --EVSGNQLT-SLPVLPPGLLELSIFSNPLTHLP-------ALPSGLCKLWIFGNQLTS- 135
Query: 189 IPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLK--TVTHMEIGYNFYQGNIPWQLGNMSE 246
+P L+ L ++ N L +PA L + ++ ++P +
Sbjct: 136 LPVLPPG---LQELSVSDNQLA-SLPALPSELCKLWAYNNQLT------SLPMLPSGL-- 183
Query: 247 VQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLS 306
Q L ++ L+ S+P S L KL + N+L +P + LK L +S NRL+
Sbjct: 184 -QELSVSDNQLA-SLPTLPSELYKLW---AYNNRLT-SLPAL---PSGLKELIVSGNRLT 234
Query: 307 GPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSK 366
+P L+ L + N ++ ++P L L ++ N + LPE+L S
Sbjct: 235 S-LPVL---PSELKELMVSGNRLT-SLPMLP---SGLLSLSVYRNQLT-RLPESLIHLSS 285
Query: 367 LRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFT 402
V++ N + +S
Sbjct: 286 ETTVNLEGNPLS-ERTLQALREITS--APGYSGPII 318
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 4e-23
Identities = 48/266 (18%), Positives = 97/266 (36%), Gaps = 31/266 (11%)
Query: 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFS 162
L L + N + PV L L +S N + P L L + N +
Sbjct: 123 LCKLWIFGNQLT-SLPVLPPGLQEL---SVSDNQLA-SLPALPSELCKLWAYN---NQLT 174
Query: 163 GSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKT 222
S+P S L+ L +++ + + +P+ L L N L +PA L
Sbjct: 175 -SLPMLPSGLQEL---SVSDNQLAS-LPTLPSE---LYKLWAYNNRLT-SLPALPSGL-- 223
Query: 223 VTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLA 282
+ + N ++P + + L ++G L+ S+P S L SL ++RNQL
Sbjct: 224 -KELIVSGNRLT-SLPVLPSEL---KELMVSGNRLT-SLPMLPSGLL---SLSVYRNQLT 274
Query: 283 GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPS 342
++P +++ +++L N LS ++ ++ + S + + +
Sbjct: 275 -RLPESLIHLSSETTVNLEGNPLSERTLQALREITSAPGYSGPIIRFDMAGASAPRETRA 333
Query: 343 LEILFIWNNYFSGSLPENLGRNSKLR 368
L + ++ + +
Sbjct: 334 LHLAA--ADWLVPAREGEPAPADRWH 357
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 88.8 bits (220), Expect = 2e-18
Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 31/208 (14%)
Query: 197 KSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGAN 256
L++ + L +P L +T + I N ++P + + L+++G
Sbjct: 40 NGNAVLNVGESGLTT-LPDCLP--AHITTLVIPDNNLT-SLPALPPEL---RTLEVSGNQ 92
Query: 257 LSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADL 316
L+ S+P L +L L +P + L L + N+L+ +P
Sbjct: 93 LT-SLPVLPPGLLELSIFSNPLTHLP-ALP------SGLCKLWIFGNQLTS-LPVL---P 140
Query: 317 KNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNN 376
L+ LS+ N+++ ++P +L L NN + SLP L+ + VS N
Sbjct: 141 PGLQELSVSDNQLA-SLPALPSELCKLWAY---NNQLT-SLPMLPS---GLQELSVSDNQ 192
Query: 377 FNGSIPPDICSGGVLFKLILFSNNFTGI 404
S+P L+KL ++N T +
Sbjct: 193 LA-SLPTLPSE---LYKLWAYNNRLTSL 216
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 1e-28
Identities = 62/322 (19%), Positives = 116/322 (36%), Gaps = 46/322 (14%)
Query: 95 PLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVL 154
P + L + ++ + + PVE N+ S + + + + P G R + V
Sbjct: 5 PRNVSNTFLQEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVS 63
Query: 155 DAFSNSFSG------------SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFL 202
S+P LE L + + + +P S KSL
Sbjct: 64 RLRDCLDRQAHELELNNLGLSSLPELPPHLES---LVASCNSLT-ELPELPQSLKSLLVD 119
Query: 203 HLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP 262
+ L+D +P L ++ + N + +P +L N S ++ +D+ +L +P
Sbjct: 120 NNNLKALSD-LPPLL------EYLGVSNNQLE-KLP-ELQNSSFLKIIDVDNNSLK-KLP 169
Query: 263 KELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLL 322
+L + NQL + E + L ++ +N L +P+ +L +
Sbjct: 170 DLPPSLEFIA---AGNNQL--EELPELQNLPFLTAIYADNNSLKK-LPDL---PLSLESI 220
Query: 323 SLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIP 382
N + L LP L ++ NN +LP+ L ++V N +P
Sbjct: 221 VAGNNIL--EELPELQNLPFLTTIYADNNLLK-TLPDLPP---SLEALNVRDNYLT-DLP 273
Query: 383 PDICSGGVLFKLILFSNNFTGI 404
S L L + N F+G+
Sbjct: 274 ELPQS---LTFLDVSENIFSGL 292
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 9e-28
Identities = 61/314 (19%), Positives = 112/314 (35%), Gaps = 43/314 (13%)
Query: 91 LPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRN 150
K L L L +S+N + P E+ N + L +D+ N+ P SL
Sbjct: 121 NNLKALSDLPPLLEYLGVSNNQLE-KLP-ELQNSSFLKIIDVDNNSLK-KLPDLPPSLEF 177
Query: 151 LLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLN 210
+ A +N +P E+ L L + + +P SLE + N+L
Sbjct: 178 ---IAAGNNQLE-ELP-ELQNLPFLTAIYADNNSLKK-LPDLPL---SLESIVAGNNIL- 227
Query: 211 DQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTK 270
+ EL L +T + N + +P ++ + D N +P+ +LT
Sbjct: 228 -EELPELQNLPFLTTIYADNNLLK-TLPDLPPSLEALNVRD----NYLTDLPELPQSLTF 281
Query: 271 LESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS 330
L+ + L L L+ S N + + + +L L++ N++
Sbjct: 282 LDVSENIFSGL-------SELPPNLYYLNASSNEIRS-LCDL---PPSLEELNVSNNKLI 330
Query: 331 GTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGV 390
+P P LE L N+ + +PE L+ + V N P S
Sbjct: 331 -ELPAL---PPRLERLIASFNHLA-EVPELPQ---NLKQLHVEYNPLR-EFPDIPES--- 378
Query: 391 LFKLILFSNNFTGI 404
+ L + +++ +
Sbjct: 379 VEDLRM-NSHLAEV 391
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 2e-22
Identities = 58/307 (18%), Positives = 102/307 (33%), Gaps = 64/307 (20%)
Query: 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFS 162
L + +N + P E+ NL L ++ N+ P SL ++ A +N
Sbjct: 175 LEFIAAGNNQLE-ELP-ELQNLPFLTAIYADNNSLK-KLPDLPLSLESI---VAGNNILE 228
Query: 163 GSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKT 222
E+ L L + + +P S LE L++ N L +P L
Sbjct: 229 --ELPELQNLPFLTTIYADNNLLKT-LPDLPPS---LEALNVRDNYLT-DLPELPQSL-- 279
Query: 223 VTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLT------------- 269
T +++ N + + N+ YL+ + + S+ +L
Sbjct: 280 -TFLDVSENIFS-GLSELPPNL---YYLNASSNEIR-SLCDLPPSLEELNVSNNKLIELP 333
Query: 270 ----KLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRL---- 321
+LE L N LA +VP LK L + N L P+ +++LR+
Sbjct: 334 ALPPRLERLIASFNHLA-EVPELP---QNLKQLHVEYNPLRE-FPDIPESVEDLRMNSHL 388
Query: 322 ------------LSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRW 369
L + N + P+ S+E L + + KL
Sbjct: 389 AEVPELPQNLKQLHVETNPLR-EFPDIP---ESVEDLRMNSERVVDPYEFAHETTDKLE- 443
Query: 370 VDVSTNN 376
DV ++
Sbjct: 444 DDVFEHH 450
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 99.3 bits (248), Expect = 3e-22
Identities = 52/265 (19%), Positives = 87/265 (32%), Gaps = 41/265 (15%)
Query: 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFS 162
L + +N + P E+ NL L ++ N P SL L V D N +
Sbjct: 217 LESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLK-TLPDLPPSLEALNVRD---NYLT 270
Query: 163 GSVPAEISQLEHLKVLNLAGSYFSG-------------PIPSQFGSFKSLEFLHLAGNLL 209
+P L L V S S I S SLE L+++ N L
Sbjct: 271 -DLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKL 329
Query: 210 NDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLT 269
++PA L+ + +N +P N+ + L + L P ++
Sbjct: 330 I-ELPALPPRLERLI---ASFNHLA-EVPELPQNL---KQLHVEYNPLR-EFPDIPESVE 380
Query: 270 KLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEM 329
L + L +VP LK L + N L P+ +++LR+ +
Sbjct: 381 DLRMN----SHL-AEVPELPQN---LKQLHVETNPLRE-FPDIPESVEDLRMN---SERV 428
Query: 330 SGTVPESLVQLPSLEILFIWNNYFS 354
+ LE +++
Sbjct: 429 VDPYEFAHETTDKLEDDVFEHHHHH 453
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 3e-28
Identities = 68/332 (20%), Positives = 118/332 (35%), Gaps = 28/332 (8%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFS 158
+L L L E F NL +L LD+ + P Q L +L L +
Sbjct: 47 LEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYF 106
Query: 159 NSFSGSV--PAEISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIPA 215
S +V L+ L L+L+ + + FG SL+ + + N +
Sbjct: 107 CGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEH 166
Query: 216 ELGML--KTVTHMEIGYNFYQGNIPWQLGNMSEV------QYLDIAGANLSGSIPKELSN 267
EL L KT++ + N + G + LD++G + I SN
Sbjct: 167 ELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSN 226
Query: 268 ------------LTKLESLFLFRNQLAGQVPWEFS--RVTTLKSLDLSDNRLSGPIPESF 313
+ + + F+ ++++ LDLS + F
Sbjct: 227 AISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVF 286
Query: 314 ADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVS 373
LK+L++L+L YN+++ E+ L +L++L + N N K+ ++D+
Sbjct: 287 ETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQ 346
Query: 374 TNNFNGSIPPDICSG-GVLFKLILFSNNFTGI 404
N+ I L L L N T I
Sbjct: 347 KNHIA-IIQDQTFKFLEKLQTLDLRDNALTTI 377
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 111 bits (278), Expect = 2e-25
Identities = 62/332 (18%), Positives = 117/332 (35%), Gaps = 40/332 (12%)
Query: 96 LRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG-HFPGGIQSLRNLLVL 154
LR++F L D L F NL +L LD+S+N + L +L +
Sbjct: 102 LRLYFCGLSDAVLKDGYFR--------NLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSI 153
Query: 155 DAFSNSFSGSVPAEISQLE--HLKVLNLAGSYFSGPIPSQFGS------FKSLEFLHLAG 206
D SN E+ L+ L +LA + + +G LE L ++G
Sbjct: 154 DFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSG 213
Query: 207 NLLNDQIPA------------ELGMLKTVTHMEIGYNFYQGNIPWQLGNM--SEVQYLDI 252
N I L + + G++ + + S V++LD+
Sbjct: 214 NGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDL 273
Query: 253 AGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPES 312
+ + + L L+ L L N++ F + L+ L+LS N L +
Sbjct: 274 SHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSN 333
Query: 313 FADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDV 372
F L + + L N ++ ++ L L+ L + +N + + + + +
Sbjct: 334 FYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALT-----TIHFIPSIPDIFL 388
Query: 373 STNNFNGSIPPDICSGGVLFKLILFSNNFTGI 404
S N ++P + + + L N +
Sbjct: 389 SGNKLV-TLPKINLTANL---IHLSENRLENL 416
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 7e-25
Identities = 66/289 (22%), Positives = 113/289 (39%), Gaps = 19/289 (6%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
+L LNL++N + + L +L L++S N + L + +D N
Sbjct: 289 LKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKN 348
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ LE L+ L+L + + S+ + L+GN L +P ++ +
Sbjct: 349 HIAIIQDQTFKFLEKLQTLDLRDNAL-----TTIHFIPSIPDIFLSGNKLVT-LP-KINL 401
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKEL-SNLTKLESLFLFR 278
+ H+ +I + L + +Q L + S + S LE LFL
Sbjct: 402 TANLIHLS-ENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGE 460
Query: 279 NQL----AGQVPWE-FSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTV 333
N L ++ W+ F ++ L+ L L+ N L+ P F+ L LR LSL N ++
Sbjct: 461 NMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLS 520
Query: 334 PESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIP 382
L +LEIL I N P+ L +D++ N F
Sbjct: 521 HNDL--PANLEILDISRNQLLAPNPDVF---VSLSVLDITHNKFICECE 564
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 8e-25
Identities = 65/421 (15%), Positives = 135/421 (32%), Gaps = 55/421 (13%)
Query: 72 KNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFN-------- 123
N++ +++ L I L++S N ++ N
Sbjct: 182 AANSLYSRVSVDWGKCMNPFRNMVLEI-------LDVSGNGWTVDITGNFSNAISKSQAF 234
Query: 124 ----LTSLISLDISRNNFSGHFPGGIQSLR--NLLVLDAFSNSFSGSVPAEISQLEHLKV 177
++ +N L ++ LD L+ LKV
Sbjct: 235 SLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKV 294
Query: 178 LNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNI 237
LNLA + + F +L+ L+L+ NLL + + L V ++++ N
Sbjct: 295 LNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQ 354
Query: 238 PWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAG-------------- 283
+ ++Q LD+ L+ + + + +FL N+L
Sbjct: 355 DQTFKFLEKLQTLDLRDNALT-----TIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLS 409
Query: 284 -------QVPWEFSRVTTLKSLDLSDNRLSG-PIPESFADLKNLRLLSLMYNEMSGTV-- 333
+ + RV L+ L L+ NR S ++ ++ +L L L N +
Sbjct: 410 ENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWET 469
Query: 334 ---PESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGV 390
+ L L++L++ +NY + P + LR + +++N + +
Sbjct: 470 ELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLT-VLSHNDLPAN- 527
Query: 391 LFKLILFSNNFTGIVMFIAAALLGIFFFRRGGKGHWKMISFLGLPQFTANDVLRSFNSTE 450
L L + N + +L + ++ +F+ T +
Sbjct: 528 LEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECELSTFINWLNHTNVTIAGPPADIY 587
Query: 451 C 451
C
Sbjct: 588 C 588
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 2e-24
Identities = 61/347 (17%), Positives = 120/347 (34%), Gaps = 50/347 (14%)
Query: 103 LVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLR--NLLVLDAFSN 159
L L+LS N + F L SL S+D S N ++ L+ L +N
Sbjct: 125 LTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAAN 184
Query: 160 SFSGSVPAEISQLE------HLKVLNLAGSYFSGPIPSQFGSF------------KSLEF 201
S V + + L++L+++G+ ++ I F + +
Sbjct: 185 SLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMG 244
Query: 202 LHLAGNLLNDQIPAELGMLK--TVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259
+ + D L +V H+++ + F + +++ L++A ++
Sbjct: 245 AGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINK 304
Query: 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNL 319
+ L L+ L L N L F + + +DL N ++ ++F L+ L
Sbjct: 305 IADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKL 364
Query: 320 RLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN--------------- 364
+ L L N ++ ++ +PS+ +F+ N NL N
Sbjct: 365 QTLDLRDNALT-----TIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDIL 419
Query: 365 ------SKLRWVDVSTNNFNGSIPPDICSG-GVLFKLILFSNNFTGI 404
L+ + ++ N F+ S L +L L N
Sbjct: 420 YFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLA 466
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 5e-24
Identities = 55/327 (16%), Positives = 110/327 (33%), Gaps = 34/327 (10%)
Query: 106 LNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGS 164
+ + ++ L + L +S N L L +L+ S +
Sbjct: 9 AFYRFCNLT-----QVPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLT 63
Query: 165 VPAEI-SQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQI--PAELGMLK 221
+ E L +L++L+L S P F L L L L+D + LK
Sbjct: 64 IDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLK 123
Query: 222 TVTHMEIGYNFYQG-NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLT--KLESLFLFR 278
+T +++ N + + G ++ ++ +D + + EL L L L
Sbjct: 124 ALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAA 183
Query: 279 NQLAGQVPWEFS------RVTTLKSLDLSDNRLSGPIPESFAD------------LKNLR 320
N L +V ++ R L+ LD+S N + I +F++ ++
Sbjct: 184 NSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIM 243
Query: 321 LLSLMYNEMSGTVPESLVQLP--SLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFN 378
++ + + L S+ L + + + L+ ++++ N N
Sbjct: 244 GAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKIN 303
Query: 379 GSIPPDICSG-GVLFKLILFSNNFTGI 404
I + G L L L N +
Sbjct: 304 -KIADEAFYGLDNLQVLNLSYNLLGEL 329
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 85.6 bits (212), Expect = 2e-17
Identities = 34/181 (18%), Positives = 65/181 (35%), Gaps = 8/181 (4%)
Query: 243 NMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWE-FSRVTTLKSLDLS 301
++ + L ++ + L +L+ L L + E F + L+ LDL
Sbjct: 22 VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLG 81
Query: 302 DNRLSGPIPESFADLKNLRLLSLMYNEMSGTV--PESLVQLPSLEILFIWNNYFSG-SLP 358
+++ P++F L +L L L + +S V L +L L + N L
Sbjct: 82 SSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLH 141
Query: 359 ENLGRNSKLRWVDVSTNNFNGSIPPDICSG---GVLFKLILFSNNFTGIVMFIAAALLGI 415
+ G+ + L+ +D S+N + L L +N+ V +
Sbjct: 142 PSFGKLNSLKSIDFSSNQIF-LVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNP 200
Query: 416 F 416
F
Sbjct: 201 F 201
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 7e-27
Identities = 57/279 (20%), Positives = 101/279 (36%), Gaps = 35/279 (12%)
Query: 106 LNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN--SFSG 163
+ + + P I +S L++ N G L L L SN SF G
Sbjct: 12 IRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKG 68
Query: 164 SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV 223
LK L+L+ + + S F + LE L + L Q+ E +
Sbjct: 69 CCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLK-QMS-EFSVFL-- 123
Query: 224 THMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE-LSNLTKLESLFLFRNQLA 282
++ + YLDI+ + + L+ LE L + N
Sbjct: 124 -------------------SLRNLIYLDISHTHTR-VAFNGIFNGLSSLEVLKMAGNSFQ 163
Query: 283 GQVPWE-FSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLP 341
+ F+ + L LDLS +L P +F L +L++L++ +N L
Sbjct: 164 ENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLN 223
Query: 342 SLEILFIWNNYFSGSLPENL--GRNSKLRWVDVSTNNFN 378
SL++L N+ + + S L +++++ N+F
Sbjct: 224 SLQVLDYSLNHIM-TSKKQELQHFPSSLAFLNLTQNDFA 261
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 92.8 bits (231), Expect = 9e-21
Identities = 52/255 (20%), Positives = 88/255 (34%), Gaps = 56/255 (21%)
Query: 103 LVDLNLSHN--SFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS 160
L L+LS N SF G F TSL LD+S N L L LD +
Sbjct: 54 LTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHS- 111
Query: 161 FSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGML 220
L+ + S F S ++L +L ++ +
Sbjct: 112 ----------NLKQM------------SEFSVFLSLRNLIYLDISHTHTR-VAFNGI--- 145
Query: 221 KTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE-LSNLTKLESLFLFRN 279
+S ++ L +AG + + + + L L L L +
Sbjct: 146 --------------------FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 185
Query: 280 QLAGQVPWE-FSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLV 338
QL Q+ F+ +++L+ L++S N + L +L++L N + T + +
Sbjct: 186 QLE-QLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM-TSKKQEL 243
Query: 339 Q--LPSLEILFIWNN 351
Q SL L + N
Sbjct: 244 QHFPSSLAFLNLTQN 258
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 8e-17
Identities = 37/165 (22%), Positives = 63/165 (38%), Gaps = 7/165 (4%)
Query: 245 SEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQ--VPWEFSRVTTLKSLDLSD 302
S L++ L LT+L L L N L+ + T+LK LDLS
Sbjct: 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87
Query: 303 NRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESL-VQLPSLEILFIWNNYFSGSLPENL 361
N + + +F L+ L L ++ + S+ + L +L L I + + +
Sbjct: 88 NGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTR-VAFNGI 145
Query: 362 GRN-SKLRWVDVSTNNFNGSIPPDICSG-GVLFKLILFSNNFTGI 404
S L + ++ N+F + PDI + L L L +
Sbjct: 146 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQL 190
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 5e-26
Identities = 58/263 (22%), Positives = 96/263 (36%), Gaps = 32/263 (12%)
Query: 99 FFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFS 158
+ L L + F QFP L SL L + N F L +L LD
Sbjct: 302 YNFGWQHLELVNCKFG-QFP--TLKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSR 356
Query: 159 N--SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAE 216
N SF G LK L+L+ + + S F + LE L + L
Sbjct: 357 NGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFS 415
Query: 217 LGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFL 276
+ ++ + YLDI+ + + + L+ LE L +
Sbjct: 416 V-----------------------FLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKM 452
Query: 277 FRNQLAGQVPWE-FSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPE 335
N + F+ + L LDLS +L P +F L +L++L++ N++
Sbjct: 453 AGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDG 512
Query: 336 SLVQLPSLEILFIWNNYFSGSLP 358
+L SL+ +++ N + S P
Sbjct: 513 IFDRLTSLQKIWLHTNPWDCSCP 535
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 2e-25
Identities = 57/313 (18%), Positives = 101/313 (32%), Gaps = 21/313 (6%)
Query: 107 NLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVP 166
+F + P + S +LD+S N S L VLD
Sbjct: 13 QCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIED 69
Query: 167 AEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHM 226
L HL L L G+ F SL+ L L +G LKT+ +
Sbjct: 70 GAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKEL 129
Query: 227 EIGYNFYQ-GNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLE----SLFLFRNQL 281
+ +N Q +P N++ +++LD++ + +L L ++ SL L N +
Sbjct: 130 NVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPM 189
Query: 282 AGQVPWEFSRVTTLKSLDLSDNRLSGPIPE-SFADLKNLRLLSLMYNEMSGT-------- 332
+ + L L L +N S + + L L + L+ E
Sbjct: 190 N-FIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDK 248
Query: 333 -VPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVL 391
E L L E + +Y+ + + + + + + + + G
Sbjct: 249 SALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNFG-W 306
Query: 392 FKLILFSNNFTGI 404
L L + F
Sbjct: 307 QHLELVNCKFGQF 319
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 9e-24
Identities = 62/338 (18%), Positives = 118/338 (34%), Gaps = 38/338 (11%)
Query: 102 ELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS 160
L L L+ N + F L+SL L N + I L+ L L+ N
Sbjct: 77 HLSTLILTGNPIQ-SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNL 135
Query: 161 F-SGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEF----LHLAGNLLNDQIPA 215
S +P S L +L+ L+L+ + + + L L+ N +N I
Sbjct: 136 IQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQP 194
Query: 216 ELGMLKTVTHMEIGYNFYQGNIPWQ-LGNMSEVQYLDIAGANLSGS---IPKELSNLTKL 271
+ + + NF N+ + ++ ++ + + S L L
Sbjct: 195 GAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGL 254
Query: 272 ESLFLFRNQLAG------QVPWEFSRVTTLKSLDLSDNRLSGPIPESF-ADLKNLRLLSL 324
+L + +LA + F+ +T + S L + S+ ++L L++
Sbjct: 255 CNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNC 314
Query: 325 MYNEMSGTVPESL----------------VQLPSLEILFIWNN--YFSGSLPENLGRNSK 366
+ + +SL V LPSLE L + N F G ++ +
Sbjct: 315 KFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTS 374
Query: 367 LRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGI 404
L+++D+S N ++ + L L +N +
Sbjct: 375 LKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQM 411
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 104 bits (260), Expect = 2e-23
Identities = 49/235 (20%), Positives = 88/235 (37%), Gaps = 33/235 (14%)
Query: 98 IFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRN--NFSGHFPGGIQSLRNLLVLD 155
+ L L + N F +L SL LD+SRN +F G +L LD
Sbjct: 322 LKLKSLKRLTFTSNKGGNAFS--EVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLD 379
Query: 156 AFSNSFSGSVPAEISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIP 214
N ++ + LE L+ L+ S S F S ++L +L ++
Sbjct: 380 LSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV-AF 437
Query: 215 AELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE-LSNLTKLES 273
+ +S ++ L +AG + + + + L L
Sbjct: 438 NGI-----------------------FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 474
Query: 274 LFLFRNQLAGQVPWE-FSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYN 327
L L + QL Q+ F+ +++L+ L+++ N+L F L +L+ + L N
Sbjct: 475 LDLSQCQLE-QLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTN 528
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 93.6 bits (233), Expect = 4e-20
Identities = 43/199 (21%), Positives = 84/199 (42%), Gaps = 6/199 (3%)
Query: 212 QIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKL 271
+IP L + ++++ +N + + + E+Q LD++ + +L+ L
Sbjct: 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHL 78
Query: 272 ESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNE-MS 330
+L L N + FS +++L+ L + L+ LK L+ L++ +N S
Sbjct: 79 STLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQS 138
Query: 331 GTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVS---TNNFNGSIPPDICS 387
+PE L +LE L + +N +L ++ +++S + N I P
Sbjct: 139 FKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK 198
Query: 388 GGVLFKLILFSNNFTGIVM 406
L KL L +N + VM
Sbjct: 199 EIRLHKLTLRNNFDSLNVM 217
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 1e-25
Identities = 53/288 (18%), Positives = 99/288 (34%), Gaps = 59/288 (20%)
Query: 470 GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCY-----NRHQAYLLYDYLP 524
V+VK + + I + I R+ + H N+ R + R + L+ +Y P
Sbjct: 36 ERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYP 95
Query: 525 NGNLSEKIRTKR-DWAAKYKIVLGVARGLCFLHHD------CYPAIPHGDLKASNIVFDE 577
NG+L + + DW + ++ V RGL +LH + PAI H DL + N++
Sbjct: 96 NGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKN 155
Query: 578 NMEPHLAEFGF-------KYLTQLADGSFPAKIAWT----------ESGEFYNAMKEEMY 620
+ +++FG + + + + T + +
Sbjct: 156 DGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQ 215
Query: 621 MDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL-- 678
+D+Y G I EI R T+ +M + EVG+ + +D LV
Sbjct: 216 VDMYALGLIYWEIFM--RCTDLFPGESVPEY-----QMAFQTEVGNHPTFEDMQVLVSRE 268
Query: 679 ---------------------DVALLCTRSTPSDRPSMEEALKLLSGL 705
+ C R + + A + ++ L
Sbjct: 269 KQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAEL 316
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 2e-25
Identities = 60/353 (16%), Positives = 114/353 (32%), Gaps = 52/353 (14%)
Query: 102 ELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSG-HFPGGIQSLRNLLVLD-AFS 158
L L+LS N S F L+SL L++ N + +L NL L
Sbjct: 75 SLEHLDLSDNHLS-SLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNV 133
Query: 159 NSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG 218
+FS + + L L L + S + + L L + +
Sbjct: 134 ETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFAD 193
Query: 219 MLKTVTHMEIGYNFYQGNIPWQLG---NMSEVQYLDIAGANLS----GSIPKELSNLTKL 271
+L +V ++E+ L S ++ L G+ L+ + K L + +L
Sbjct: 194 ILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILEL 253
Query: 272 ESLFLFRNQLAGQVPWE-----------FSRVTTLKSLDLSDNRLSGPIPESFADLKNLR 320
+ L G + T++ L + L + ++ L+ ++
Sbjct: 254 SEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVK 313
Query: 321 LLSLMYNEMSGTVPESLVQLPSLEIL----------FIWNNYFSGSLPE----NLGRN-- 364
+++ +++ L SLE L ++ N+ G+ P L +N
Sbjct: 314 RITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHL 373
Query: 365 -------------SKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGI 404
L +D+S N F+ +P + L L S +
Sbjct: 374 RSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVV 425
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 9e-25
Identities = 55/320 (17%), Positives = 101/320 (31%), Gaps = 23/320 (7%)
Query: 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFS 162
+ L+LS N + ++ +L L + + + SL +L LD N S
Sbjct: 28 MKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLS 87
Query: 163 GSVPAE-ISQLEHLKVLNLAG-SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAE-LGM 219
S+ + L LK LNL G Y + + S F + +L+ L + +I
Sbjct: 88 -SLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAG 146
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
L ++ +EI + L ++ ++ +L + + + + L+ + L L
Sbjct: 147 LTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDT 206
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFA------------------DLKNLRL 321
LA + R S ESF D L
Sbjct: 207 NLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGL 266
Query: 322 LSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSI 381
+E V+ ++ L I Y L K++ + V + +
Sbjct: 267 GDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LV 325
Query: 382 PPDICSGGVLFKLILFSNNF 401
P + + S N
Sbjct: 326 PCSFSQHLKSLEFLDLSENL 345
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 6e-24
Identities = 47/259 (18%), Positives = 87/259 (33%), Gaps = 5/259 (1%)
Query: 122 FNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181
+ + D +F+ P G+ + LD N + ++ +L+VL L
Sbjct: 2 LSCDASGVCDGRSRSFT-SIPSGL--TAAMKSLDLSFNKITYIGHGDLRACANLQVLILK 58
Query: 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG-NIPWQ 240
S + F S SLE L L+ N L+ + G L ++ ++ + N YQ +
Sbjct: 59 SSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSL 118
Query: 241 LGNMSEVQYLDIAGANLSGSIPKE-LSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLD 299
N++ +Q L I I + + LT L L + L + + L
Sbjct: 119 FPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLT 178
Query: 300 LSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPE 359
L + + + L ++R L L ++ L + S E
Sbjct: 179 LHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDE 238
Query: 360 NLGRNSKLRWVDVSTNNFN 378
+ KL + +
Sbjct: 239 SFNELLKLLRYILELSEVE 257
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 7e-23
Identities = 37/230 (16%), Positives = 77/230 (33%), Gaps = 15/230 (6%)
Query: 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFS 162
+ L++ L + + + + Q L++L LD N
Sbjct: 288 IRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMV 347
Query: 163 GSV---PAEISQLEHLKVLNLAGSYFS--GPIPSQFGSFKSLEFLHLAGNLLNDQIPAEL 217
A L+ L L+ ++ + K+L L ++ N + +P
Sbjct: 348 EEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSC 406
Query: 218 GMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLF 277
+ + + + + + ++ LD++ NL S L +L+ L++
Sbjct: 407 QWPEKMRFLNLSSTGIR-VVKT--CIPQTLEVLDVSNNNLD-SFS---LFLPRLQELYIS 459
Query: 278 RNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYN 327
RN+L L + +S N+L F L +L+ + L N
Sbjct: 460 RNKLKTLPDASLF--PVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTN 507
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 1e-22
Identities = 60/315 (19%), Positives = 107/315 (33%), Gaps = 18/315 (5%)
Query: 69 KCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLI 128
+ + + V S FNEL+ L S + + L L
Sbjct: 209 ARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELS-EVEFDDCTLNGLG 267
Query: 129 SLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGP 188
+ S ++ + L + S LE +K + + S
Sbjct: 268 DFNPSESDVVSELGK--VETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLV 325
Query: 189 IPSQFGSFKSLEFLHLAGNLLNDQI---PAELGMLKTVTHMEIGYNFYQ--GNIPWQLGN 243
S KSLEFL L+ NL+ ++ A G ++ + + N + L
Sbjct: 326 PCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLT 385
Query: 244 MSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDN 303
+ + LDI+ +P K+ L L + V TL+ LD+S+N
Sbjct: 386 LKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTLEVLDVSNN 441
Query: 304 RLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGR 363
L L L+ L + N++ T+P++ P L ++ I N R
Sbjct: 442 NLD----SFSLFLPRLQELYISRNKLK-TLPDA-SLFPVLLVMKISRNQLKSVPDGIFDR 495
Query: 364 NSKLRWVDVSTNNFN 378
+ L+ + + TN ++
Sbjct: 496 LTSLQKIWLHTNPWD 510
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 2e-22
Identities = 47/320 (14%), Positives = 101/320 (31%), Gaps = 39/320 (12%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
++ L L + + + L+S+ L++ N + + + +
Sbjct: 171 IRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAF 230
Query: 160 SFSG----------SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLL 209
S + I +L ++ + + PS+ L +
Sbjct: 231 RGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVE------ 284
Query: 210 NDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLT 269
T+ + I + ++ + +V+ + + + + +L
Sbjct: 285 ----------TVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLK 334
Query: 270 KLESLFLFRNQLAGQVPWE---FSRVTTLKSLDLSDNRLS--GPIPESFADLKNLRLLSL 324
LE L L N + + +L++L LS N L E LKNL L +
Sbjct: 335 SLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDI 394
Query: 325 MYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPD 384
N +P+S + L + + + + + L +DVS NN + S
Sbjct: 395 SRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIPQT--LEVLDVSNNNLD-SFSLF 449
Query: 385 ICSGGVLFKLILFSNNFTGI 404
+ L +L + N +
Sbjct: 450 LPR---LQELYISRNKLKTL 466
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 88.2 bits (219), Expect = 2e-18
Identities = 47/349 (13%), Positives = 111/349 (31%), Gaps = 57/349 (16%)
Query: 71 NKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISL 130
+++ ++ + + + L + L S +
Sbjct: 182 SESAFLLEIFADILSSV------RYLELRDTNLARFQFS--PLPVDEVSSPMKKLAFRGS 233
Query: 131 DISRNNFSG--HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEH--------LKVLNL 180
++ +F+ I L + D N P+E + ++ L++
Sbjct: 234 VLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHI 293
Query: 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQ 240
Y + + + + ++ + + + + +P
Sbjct: 294 PQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSF----------------------- 329
Query: 241 LGNMSEVQYLDIAG---ANLSGSIPKELSNLTKLESLFLFRNQLA--GQVPWEFSRVTTL 295
++ +++LD++ L++L L +N L + + L
Sbjct: 330 SQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNL 389
Query: 296 KSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSG 355
SLD+S N P+P+S + +R L+L + V + +LE+L + NN
Sbjct: 390 TSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCI--PQTLEVLDVSNNNLD- 444
Query: 356 SLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGI 404
S L +L+ + +S N ++P VL + + N +
Sbjct: 445 SFSLFL---PRLQELYISRNKLK-TLPDASLF-PVLLVMKISRNQLKSV 488
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 80.2 bits (198), Expect = 7e-16
Identities = 31/158 (19%), Positives = 60/158 (37%), Gaps = 7/158 (4%)
Query: 250 LDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPI 309
D + + SIP L+ ++SL L N++ + L+ L L +R++
Sbjct: 10 CDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIE 66
Query: 310 PESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPEN--LGRNSKL 367
++F L +L L L N +S L SL+ L + N + +L + L
Sbjct: 67 GDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQ-TLGVTSLFPNLTNL 125
Query: 368 RWVDVSTNNFNGSIPPDICSG-GVLFKLILFSNNFTGI 404
+ + + I +G L +L + + +
Sbjct: 126 QTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNY 163
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 109 bits (273), Expect = 2e-25
Identities = 59/283 (20%), Positives = 101/283 (35%), Gaps = 36/283 (12%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
N+ + + S + P I ++ L++ NN + L +L VL N
Sbjct: 53 SNQFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRN 109
Query: 160 SFSGSVPAEI-SQLEHLKVLNLAGSYFSGPIPSQ-FGSFKSLEFLHLAGNLLNDQIPAEL 217
S + + L L L L ++ + IPS F L L L N + IP+
Sbjct: 110 SIR-QIEVGAFNGLASLNTLELFDNWLTV-IPSGAFEYLSKLRELWLRNNPIE-SIPSYA 166
Query: 218 GMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE-LSNLTKLESLFL 276
+ + LD+ I + L L+ L L
Sbjct: 167 -----------------------FNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNL 203
Query: 277 FRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPES 336
+ +P + + L+ L++S N P SF L +L+ L +M +++S +
Sbjct: 204 GMCNIK-DMP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNA 261
Query: 337 LVQLPSLEILFIWNNYFSGSLPEN-LGRNSKLRWVDVSTNNFN 378
L SL L + +N S SLP + L + + N +N
Sbjct: 262 FDGLASLVELNLAHNNLS-SLPHDLFTPLRYLVELHLHHNPWN 303
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 79.0 bits (195), Expect = 1e-15
Identities = 32/165 (19%), Positives = 54/165 (32%), Gaps = 6/165 (3%)
Query: 245 SEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNR 304
++ + LS +P+ + + L L N + F + L+ L L N
Sbjct: 54 NQFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNS 110
Query: 305 LSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN 364
+ +F L +L L L N ++ + L L L++ NN S+P
Sbjct: 111 IRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIE-SIPSYAFNR 169
Query: 365 -SKLRWVDVSTNNFNGSIPPDICSG-GVLFKLILFSNNFTGIVMF 407
L +D+ I G L L L N +
Sbjct: 170 VPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNL 214
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 2e-25
Identities = 64/307 (20%), Positives = 118/307 (38%), Gaps = 26/307 (8%)
Query: 106 LNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSV 165
+ S + P ++ LD+ N + G ++L+NL L +N S +
Sbjct: 36 VQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKIS-KI 91
Query: 166 PAEI-SQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAE-LGMLKTV 223
+ L L+ L L+ + +P K+L+ L + N + + L +
Sbjct: 92 SPGAFAPLVKLERLYLSKNQLKE-LPE--KMPKTLQELRVHENEITK-VRKSVFNGLNQM 147
Query: 224 THMEIGYNFYQ-GNIPWQ-LGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQL 281
+E+G N + I M ++ Y+ IA N++ +IP+ L L L L N++
Sbjct: 148 IVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGL--PPSLTELHLDGNKI 204
Query: 282 AGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLP 341
+ L L LS N +S S A+ +LR L L N++ VP L
Sbjct: 205 TKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHK 263
Query: 342 SLEILFIWNNYFSGSLPEN-------LGRNSKLRWVDVSTNNFN-GSIPPDICSG-GVLF 392
++++++ NN S ++ N + + V + +N I P V
Sbjct: 264 YIQVVYLHNNNIS-AIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRA 322
Query: 393 KLILFSN 399
+ L +
Sbjct: 323 AVQLGNY 329
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 2e-23
Identities = 55/286 (19%), Positives = 96/286 (33%), Gaps = 47/286 (16%)
Query: 103 LVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSF 161
L L L +N S + F L L L +S+N P + + L L N
Sbjct: 78 LHTLILINNKIS-KISPGAFAPLVKLERLYLSKNQLK-ELPEKM--PKTLQELRVHENEI 133
Query: 162 SGSVPAEI-SQLEHLKVLNLAG-SYFSGPIPSQ-FGSFKSLEFLHLAGNLLNDQIPAELG 218
+ V + + L + V+ L S I + F K L ++ +A + IP L
Sbjct: 134 T-KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGL- 190
Query: 219 MLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE-LSNLTKLESLFLF 277
P L L + G ++ + L L L L L
Sbjct: 191 -------------------PPSL------TELHLDGNKIT-KVDAASLKGLNNLAKLGLS 224
Query: 278 RNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSG------ 331
N ++ + L+ L L++N+L +P AD K ++++ L N +S
Sbjct: 225 FNSISAVDNGSLANTPHLRELHLNNNKLVK-VPGGLADHKYIQVVYLHNNNISAIGSNDF 283
Query: 332 TVPESLVQLPSLEILFIWNNYFS-GSLPENLGRN-SKLRWVDVSTN 375
P + S + +++N + + R V +
Sbjct: 284 CPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 7e-18
Identities = 45/262 (17%), Positives = 90/262 (34%), Gaps = 62/262 (23%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFS 158
L +L + N + + +F L +I +++ N GI++ AF
Sbjct: 120 PKTLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPLK---SSGIEN-------GAFQ 168
Query: 159 NSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG 218
++ L + +A + + IP G SL LHL GN + ++ A
Sbjct: 169 G------------MKKLSYIRIADTNITT-IPQ--GLPPSLTELHLDGNKIT-KVDAAS- 211
Query: 219 MLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE-LSNLTKLESLFLF 277
L ++ + L ++ ++S ++ L+N L L L
Sbjct: 212 ----------------------LKGLNNLAKLGLSFNSIS-AVDNGSLANTPHLRELHLN 248
Query: 278 RNQLAGQVPWEFSRVTTLKSLDLSDNRLSG------PIPESFADLKNLRLLSLMYNEMSG 331
N+L +VP + ++ + L +N +S P + +SL N +
Sbjct: 249 NNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 307
Query: 332 TV--PESLVQLPSLEILFIWNN 351
P + + + + N
Sbjct: 308 WEIQPSTFRCVYVRAAVQLGNY 329
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 9e-13
Identities = 39/207 (18%), Positives = 69/207 (33%), Gaps = 28/207 (13%)
Query: 103 LVDLNLSHNSF-SGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS 160
++ + L N S F + L + I+ N + P G+ +L L N
Sbjct: 147 MIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGL--PPSLTELHLDGNK 203
Query: 161 FSGSVPAEI-SQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ V A L +L L L+ + S + L LHL N L ++P L
Sbjct: 204 IT-KVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKL-VKVPGGLAD 261
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
K + + + N N+S + D P + + LF N
Sbjct: 262 HKYIQVVYLHNN-----------NISAIGSNDFCP-------PGYNTKKASYSGVSLFSN 303
Query: 280 QL-AGQVPWE-FSRVTTLKSLDLSDNR 304
+ ++ F V ++ L + +
Sbjct: 304 PVQYWEIQPSTFRCVYVRAAVQLGNYK 330
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 2e-08
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Query: 271 LESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS 330
L + L +VP + T LDL +N+++ F +LKNL L L+ N++S
Sbjct: 33 LRVVQCSDLGLE-KVPKDLPPDTA--LLDLQNNKITEIKDGDFKNLKNLHTLILINNKIS 89
Query: 331 GTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSG-G 389
P + L LE L++ N LPE + + L+ + V N + + +G
Sbjct: 90 KISPGAFAPLVKLERLYLSKNQLK-ELPEKMPKT--LQELRVHENEIT-KVRKSVFNGLN 145
Query: 390 VLFKLILFSNNFT 402
+ + L +N
Sbjct: 146 QMIVVELGTNPLK 158
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 6e-25
Identities = 56/283 (19%), Positives = 102/283 (36%), Gaps = 36/283 (12%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
N+ + + + P I T+ L++ N + LR+L +L N
Sbjct: 42 SNQFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRN 98
Query: 160 SFSGSVPAEI-SQLEHLKVLNLAGSYFSGPIPSQ-FGSFKSLEFLHLAGNLLNDQIPAEL 217
++ + L +L L L + + IP+ F L+ L L N + IP+
Sbjct: 99 HIR-TIEIGAFNGLANLNTLELFDNRLTT-IPNGAFVYLSKLKELWLRNNPIE-SIPSYA 155
Query: 218 GMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE-LSNLTKLESLFL 276
+ ++ LD+ I + L+ L L L
Sbjct: 156 -----------------------FNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNL 192
Query: 277 FRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPES 336
L ++P + + L LDLS N LS P SF L +L+ L ++ +++ +
Sbjct: 193 AMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNA 250
Query: 337 LVQLPSLEILFIWNNYFSGSLPEN-LGRNSKLRWVDVSTNNFN 378
L SL + + +N + LP + L + + N +N
Sbjct: 251 FDNLQSLVEINLAHNNLT-LLPHDLFTPLHHLERIHLHHNPWN 292
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 79.8 bits (197), Expect = 6e-16
Identities = 40/165 (24%), Positives = 59/165 (35%), Gaps = 6/165 (3%)
Query: 245 SEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNR 304
++ + NL +P +S T L L NQ+ F + L+ L LS N
Sbjct: 43 NQFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNH 99
Query: 305 LSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN 364
+ +F L NL L L N ++ + V L L+ L++ NN S+P
Sbjct: 100 IRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNR 158
Query: 365 -SKLRWVDVSTNNFNGSIPPDICSG-GVLFKLILFSNNFTGIVMF 407
LR +D+ I G L L L N I
Sbjct: 159 IPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNL 203
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 2e-23
Identities = 60/323 (18%), Positives = 112/323 (34%), Gaps = 34/323 (10%)
Query: 68 VKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPV-EIFNLTS 126
+ NN + N +SG +++ L + + + + +
Sbjct: 3 IMLPINNNFSLSQNSFYNTISGTYAD--YFSAWDKWEKQALPGENRNEAVSLLKECLINQ 60
Query: 127 LISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFS 186
L ++R N S P + + VL+ N+ S+P + LE+L + S
Sbjct: 61 FSELQLNRLNLS-SLPDNL--PPQITVLEITQNALI-SLPELPASLEYLDACDNRLST-- 114
Query: 187 GPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSE 246
+P S L+ L + N L +P +L+ ++ N +P ++
Sbjct: 115 --LPELPAS---LKHLDVDNNQLT-MLPELPALLE---YINADNNQLT-MLPELPTSL-- 162
Query: 247 VQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKS----LDLSD 302
+ L + L+ +P+ +L L + N L +P R + +
Sbjct: 163 -EVLSVRNNQLT-FLPELPESLEAL---DVSTNLLE-SLPAVPVRNHHSEETEIFFRCRE 216
Query: 303 NRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLG 362
NR++ IPE+ L + L N +S + ESL Q + YFS S +
Sbjct: 217 NRITH-IPENILSLDPTCTIILEDNPLSSRIRESLSQQTAQPDYHGPRIYFSMSDGQQ-- 273
Query: 363 RNSKLRWVDVSTNNFNGSIPPDI 385
D T F + D+
Sbjct: 274 NTLHRPLADAVTAWFPENKQSDV 296
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 95.4 bits (237), Expect = 1e-20
Identities = 54/322 (16%), Positives = 101/322 (31%), Gaps = 86/322 (26%)
Query: 101 NELVDL--NLSHNSFSGQFPVEIF----NLTSLISLDISRNNFSGHFPGGIQSLRNLLVL 154
N L N +N+ SG + F +RN + + L
Sbjct: 8 NNNFSLSQNSFYNTISGT-YADYFSAWDKWEKQALPGENRNEAVSLLKECL--INQFSEL 64
Query: 155 DAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP 214
+ S S+P + + VL + + +P S LE+L N L+ +P
Sbjct: 65 QLNRLNLS-SLPDNLPP--QITVLEITQNALI-SLPELPAS---LEYLDACDNRLS-TLP 116
Query: 215 AELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESL 274
L ++LD+ L+ +P+ + L +
Sbjct: 117 ELPASL---------------------------KHLDVDNNQLT-MLPELPALLEYIN-- 146
Query: 275 FLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVP 334
NQL +P T+L+ L + +N+L+ +PE ++L L + N + ++P
Sbjct: 147 -ADNNQL-TMLP---ELPTSLEVLSVRNNQLTF-LPEL---PESLEALDVSTNLLE-SLP 196
Query: 335 ESLVQLPSLEILFIW----NNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGV 390
V+ E I+ N + +PEN+
Sbjct: 197 AVPVRNHHSEETEIFFRCRENRIT-HIPENILSLDPTCT--------------------- 234
Query: 391 LFKLILFSNNFTGIVMFIAAAL 412
+IL N + + +
Sbjct: 235 ---IILEDNPLSSRIRESLSQQ 253
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 84.3 bits (208), Expect = 4e-17
Identities = 45/263 (17%), Positives = 93/263 (35%), Gaps = 31/263 (11%)
Query: 81 NLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGH 140
L+ LS +LP ++ L ++ N+ P +L L D N S
Sbjct: 65 QLNRLNLS-SLP----DNLPPQITVLEITQNALI-SLPELPASLEYL---DACDNRLS-T 114
Query: 141 FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLE 200
P SL++L D +N + +P + LE++ N + + +P S LE
Sbjct: 115 LPELPASLKHL---DVDNNQLT-MLPELPALLEYI---NADNNQLTM-LPELPTS---LE 163
Query: 201 FLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG--NIPWQLGNMSEVQ-YLDIAGANL 257
L + N L +P L +++ N + +P + + E + + +
Sbjct: 164 VLSVRNNQLT-FLPELPESL---EALDVSTNLLESLPAVPVRNHHSEETEIFFRCRENRI 219
Query: 258 SGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLK 317
+ IP+ + +L ++ L N L+ ++ S+ T + + +
Sbjct: 220 T-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTAQPDYHGPRIYF--SMSDGQQNTL 276
Query: 318 NLRLLSLMYNEMSGTVPESLVQL 340
+ L + + Q+
Sbjct: 277 HRPLADAVTAWFPENKQSDVSQI 299
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 98.5 bits (246), Expect = 4e-23
Identities = 50/261 (19%), Positives = 98/261 (37%), Gaps = 48/261 (18%)
Query: 470 GITVSVKKIEWGATRIKIVSEF---ITRIGTVRHKNLIRLLGFCYNRHQAYL--LYDYLP 524
G + VK ++ + +F R+ H N++ +LG C + + + ++P
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92
Query: 525 NGNLSEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580
G+L + D + K L +ARG+ FLH P IP L + +++ DE+M
Sbjct: 93 YGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT-LEPLIPRHALNSRSVMIDEDMT 151
Query: 581 PHLAEFGFKYLTQLADGSFPAKIAWT--E--SGEFYNAMKEEMYMDVYGFGEIIL-EILT 635
++ K+ Q + AW E + + + D++ F ++L E++T
Sbjct: 152 ARISMADVKFSFQSPGRMYA--PAWVAPEALQKKPEDTNRRS--ADMWSFA-VLLWELVT 206
Query: 636 NGRLTNAGSSLQNKPIDGL-----LGEMYNENE-----VGSSSSLQDEIKLVLDVALLCT 685
P L ++ E G S + +K +C
Sbjct: 207 R-----------EVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMK-------ICM 248
Query: 686 RSTPSDRPSMEEALKLLSGLK 706
P+ RP + + +L ++
Sbjct: 249 NEDPAKRPKFDMIVPILEKMQ 269
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 95.4 bits (238), Expect = 6e-22
Identities = 48/253 (18%), Positives = 84/253 (33%), Gaps = 32/253 (12%)
Query: 129 SLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGP 188
+ + P GI + + N S A +L +L L + +
Sbjct: 15 TTSCPQQGLQ-AVPVGIPA--ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARI 71
Query: 189 IPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQ 248
+ F LE L L+ N + + +
Sbjct: 72 DAAAFTGLALLEQLDLSDNAQLRSVDPAT-----------------------FHGLGRLH 108
Query: 249 YLDIAGANLSGSIPKE-LSNLTKLESLFLFRNQLAGQVPWE-FSRVTTLKSLDLSDNRLS 306
L + L + L L+ L+L N L +P + F + L L L NR+S
Sbjct: 109 TLHLDRCGLQ-ELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRIS 166
Query: 307 GPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPEN-LGRNS 365
+F L +L L L N ++ P + L L L+++ N S +LP L
Sbjct: 167 SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS-ALPTEALAPLR 225
Query: 366 KLRWVDVSTNNFN 378
L+++ ++ N +
Sbjct: 226 ALQYLRLNDNPWV 238
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 1e-20
Identities = 54/255 (21%), Positives = 83/255 (32%), Gaps = 51/255 (20%)
Query: 99 FFNELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAF 157
+ L N S P F +L L + N + L L LD
Sbjct: 30 IPAASQRIFLHGNRIS-HVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLS 88
Query: 158 SNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAEL 217
N+ SV F L LHL L + + L
Sbjct: 89 DNAQLRSVDPAT-----------------------FHGLGRLHTLHLDRCGLQE-LGPGL 124
Query: 218 GMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE-LSNLTKLESLFL 276
++ +QYL + L ++P + +L L LFL
Sbjct: 125 -----------------------FRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFL 160
Query: 277 FRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPES 336
N+++ F + +L L L NR++ P +F DL L L L N +S E+
Sbjct: 161 HGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEA 220
Query: 337 LVQLPSLEILFIWNN 351
L L +L+ L + +N
Sbjct: 221 LAPLRALQYLRLNDN 235
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 98.6 bits (246), Expect = 6e-22
Identities = 52/321 (16%), Positives = 106/321 (33%), Gaps = 44/321 (13%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
F V + + L +L SLD ++ + GI+ L L L SN
Sbjct: 20 FASEVAAAFEMQATD---TISEEQLATLTSLDCHNSSIT-DMT-GIEKLTGLTKLICTSN 74
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ + ++ +SQ +L L + + + L +L+ N L ++ +
Sbjct: 75 NIT-TLD--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNCDTNKLTKLDVSQNPL 128
Query: 220 LKT-------VTHMEIGYN---------FYQGNIPWQLGNMSEVQYLDIAGANLSGSIPK 263
L +T +++ +N + + +++ LD + ++ +
Sbjct: 129 LTYLNCARNTLTEIDVSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKIT-ELD- 186
Query: 264 ELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLS 323
+S L L N + + ++ L LD S N+L+ I L L
Sbjct: 187 -VSQNKLLNRLNCDTNNITK---LDLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFD 239
Query: 324 LMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPP 383
N ++ + S L L L + L N++L + +
Sbjct: 240 CSVNPLT-ELDVS--TLSKLTTLHCIQTDLL-EID--LTHNTQLIYFQAEGCRKIKEL-- 291
Query: 384 DICSGGVLFKLILFSNNFTGI 404
D+ L+ L + T +
Sbjct: 292 DVTHNTQLYLLDCQAAGITEL 312
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 96.7 bits (241), Expect = 2e-21
Identities = 48/305 (15%), Positives = 99/305 (32%), Gaps = 33/305 (10%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
+L LN N + +++ L L+ +RN + + L LD N
Sbjct: 105 LTKLTYLNCDTNKLT---KLDVSQNPLLTYLNCARNTLT-EID--VSHNTQLTELDCHLN 158
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ ++ L L+ + + + + K L L+ N + +L
Sbjct: 159 KKITKLD--VTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITK---LDLNQ 210
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
+T ++ N I + ++++ Y D + L+ + +S L+KL +L +
Sbjct: 211 NIQLTFLDCSSNKLT-EID--VTPLTQLTYFDCSVNPLT-ELD--VSTLSKLTTLHCIQT 264
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339
L + + + T L R + L LL ++ L Q
Sbjct: 265 DL---LEIDLTHNTQLIYFQAEGCRKIKELD--VTHNTQLYLLDCQAAGIT---ELDLSQ 316
Query: 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSN 399
P L L++ N + L + N+KL+ + + + L
Sbjct: 317 NPKLVYLYLNNTELT-ELD--VSHNTKLKSLSCVNAHIQ-DFSS-VGKIPALNNNFEAEG 371
Query: 400 NFTGI 404
+
Sbjct: 372 QTITM 376
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 95.9 bits (239), Expect = 5e-21
Identities = 48/321 (14%), Positives = 103/321 (32%), Gaps = 45/321 (14%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
L L + N+ + +++ T+L L N + + + L L L+ +N
Sbjct: 63 LTGLTKLICTSNNITT---LDLSQNTNLTYLACDSNKLT-NLD--VTPLTKLTYLNCDTN 116
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ ++SQ L LN A + + I L L N ++ +
Sbjct: 117 KLT---KLDVSQNPLLTYLNCARNTLT-EID--VSHNTQLTELDCHLNKKITKLD--VTP 168
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
+T ++ +N + + + L+ N++ + L+ +L L N
Sbjct: 169 QTQLTTLDCSFNKIT-ELD--VSQNKLLNRLNCDTNNIT-KLD--LNQNIQLTFLDCSSN 222
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNL----------------RLLS 323
+L ++ + +T L D S N L+ + + L L +L+
Sbjct: 223 KLT-EID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIY 279
Query: 324 LMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPP 383
+ L +L + L L +N KL ++ ++ +
Sbjct: 280 FQAEGCRKIKELDVTHNTQLYLLDCQAAGIT-ELD--LSQNPKLVYLYLNNTELT-ELDV 335
Query: 384 DICSGGVLFKLILFSNNFTGI 404
+ L L + +
Sbjct: 336 SHNTK--LKSLSCVNAHIQDF 354
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 1e-16
Identities = 49/270 (18%), Positives = 91/270 (33%), Gaps = 30/270 (11%)
Query: 135 NNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFG 194
+F+ FP + + + F + ++ QL L L+ S + +
Sbjct: 9 QSFNDWFPD--DNFASEVAAA-FEMQATDTIS--EEQLATLTSLDCHNSSITD--MTGIE 61
Query: 195 SFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAG 254
L L N + +L +T++ N N+ + ++++ YL+
Sbjct: 62 KLTGLTKLICTSNNITTL---DLSQNTNLTYLACDSNKLT-NLD--VTPLTKLTYLNCDT 115
Query: 255 ANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFA 314
L+ + +S L L RN L + S T L LD N+ +
Sbjct: 116 NKLT-KLD--VSQNPLLTYLNCARNTLT---EIDVSHNTQLTELDCHLNKKITKLD--VT 167
Query: 315 DLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVST 374
L L +N+++ + Q L L N + L L +N +L ++D S+
Sbjct: 168 PQTQLTTLDCSFNKITE---LDVSQNKLLNRLNCDTNNIT-KLD--LNQNIQLTFLDCSS 221
Query: 375 NNFNGSIPPDICSGGVLFKLILFSNNFTGI 404
N I + L N T +
Sbjct: 222 NKLT-EIDVTPLTQ--LTYFDCSVNPLTEL 248
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 4e-12
Identities = 37/263 (14%), Positives = 77/263 (29%), Gaps = 25/263 (9%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
L LN N+ + +++ L LD S N + + L L D N
Sbjct: 190 NKLLNRLNCDTNNITK---LDLNQNIQLTFLDCSSNKLT-EID--VTPLTQLTYFDCSVN 243
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ + +S L L L+ + I L + G ++
Sbjct: 244 PLT-ELD--VSTLSKLTTLHCIQTDLLE-ID--LTHNTQLIYFQAEGC--RKIKELDVTH 295
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
+ ++ + L ++ YL + L+ + +S+ TKL+SL
Sbjct: 296 NTQLYLLDCQAAGIT-ELD--LSQNPKLVYLYLNNTELT-ELD--VSHNTKLKSLSCVNA 349
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSG---TVPES 336
+ ++ L + ++ + E+ + +S + G +
Sbjct: 350 HIQ-DFS-SVGKIPALNNNFEAEGQTITMPKETLTNNSLTIAVSPDLLDQFGNPMNIEPG 407
Query: 337 LVQLPSLEILFIWNNYFSGSLPE 359
+ I S P
Sbjct: 408 DGGVYDQATNTITWENLSTDNPA 430
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 95.7 bits (238), Expect = 9e-22
Identities = 50/281 (17%), Positives = 88/281 (31%), Gaps = 46/281 (16%)
Query: 80 INLSMKGLSGALPGKPLRIF-FNELVDLNLSHNSFSGQFPVEIFNLT--SLISLDISRNN 136
+ + + + LR+ + L +L L + +G P + T L L++ +
Sbjct: 73 LTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVS 132
Query: 137 FSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSF 196
++ + L+ L LKVL++A ++ Q F
Sbjct: 133 WAT-RDAWLAELQQWL-------------------KPGLKVLSIAQAHSLNFSCEQVRVF 172
Query: 197 KSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGAN 256
+L L L+ N + P + + + +
Sbjct: 173 PALSTLDLSDNPELGERG-----------------LISALCPLKFPTLQVLALRNAGMET 215
Query: 257 LSGSIPKELSNLTKLESLFLFRNQLAGQVPWE-FSRVTTLKSLDLSDNRLSGPIPESFAD 315
SG + +L+ L L N L + L SL+LS L A
Sbjct: 216 PSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVPKGLPA- 274
Query: 316 LKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGS 356
L +L L YN + P +LP + L + N F S
Sbjct: 275 --KLSVLDLSYNRLD-RNPSPD-ELPQVGNLSLKGNPFLDS 311
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 80.7 bits (199), Expect = 1e-16
Identities = 53/279 (18%), Positives = 93/279 (33%), Gaps = 20/279 (7%)
Query: 140 HFPGGIQSLRNLL-VLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKS 198
GG +SL LL +D ++ + + L+ L V +
Sbjct: 37 ELYGGGRSLEYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISG 96
Query: 199 LEFLHLAGNLLNDQIPAELGML--KTVTHMEIGYNFYQGNIPW--QLGNMSE--VQYLDI 252
L+ L L + P L + + + + W +L + ++ L I
Sbjct: 97 LQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSI 156
Query: 253 AGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFS----RVTTLKSLDLSDNR---L 305
A A+ +++ L +L L N G+ + + TL+ L L +
Sbjct: 157 AQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETP 216
Query: 306 SGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLP-SLEILFIWNNYFSGSLPENLGRN 364
SG A L+ L L +N + P L L + +P+ L
Sbjct: 217 SGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP-- 273
Query: 365 SKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTG 403
+KL +D+S N + + PD + L L N F
Sbjct: 274 AKLSVLDLSYNRLDRNPSPDELPQ--VGNLSLKGNPFLD 310
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 77.6 bits (191), Expect = 1e-15
Identities = 41/236 (17%), Positives = 75/236 (31%), Gaps = 17/236 (7%)
Query: 194 GSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQ---LGNMSEVQYL 250
G L + ++ ++ + + I + + +S +Q L
Sbjct: 41 GGRSLEYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQEL 100
Query: 251 DIAGANLSGSIPKELSNLT--KLESLFLFRNQLAGQVPW----EFSRVTTLKSLDLSDNR 304
+ ++G+ P L T L L L A + W + LK L ++
Sbjct: 101 TLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAH 160
Query: 305 LSGPIPESFADLKNLRLLSLMYNEMSG--TVPESLV--QLPSLEILFIWNNYF---SGSL 357
E L L L N G + +L + P+L++L + N SG
Sbjct: 161 SLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVC 220
Query: 358 PENLGRNSKLRWVDVSTNNFNGSIPPDICSGGV-LFKLILFSNNFTGIVMFIAAAL 412
+L+ +D+S N+ + C L L L + + A L
Sbjct: 221 SALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVPKGLPAKL 276
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 46.8 bits (111), Expect = 1e-05
Identities = 35/173 (20%), Positives = 60/173 (34%), Gaps = 11/173 (6%)
Query: 255 ANLSGSIPKEL-SNLTKLESLFLFRNQLAGQVPW-EFSRVTTLKSLDLSDNRLSGPIPES 312
N G+ EL LE L + A + + + +LK L + R+ I
Sbjct: 28 FNCLGAADVELYGGGRSLEYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFG 87
Query: 313 FADLKN---LRLLSLMYNEMSGTVPESLVQL--PSLEILFIWNNYFSGSLPENLG----R 363
+ L+ L+L E++GT P L++ P L IL + N ++
Sbjct: 88 ALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWL 147
Query: 364 NSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIVMFIAAALLGIF 416
L+ + ++ + + L L L N G I+A F
Sbjct: 148 KPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKF 200
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 95.5 bits (238), Expect = 2e-21
Identities = 59/288 (20%), Positives = 102/288 (35%), Gaps = 52/288 (18%)
Query: 103 LVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSF 161
L L L +N S + + F L L L IS+N+ P + +L+ L N
Sbjct: 80 LYALVLVNNKIS-KIHEKAFSPLRKLQKLYISKNHLV-EIPPNL--PSSLVELRIHDNRI 135
Query: 162 SGSVPAEI-SQLEHLKVLNLAG-SYFSGPIPSQFGSFK--SLEFLHLAGNLLNDQIPAEL 217
VP + S L ++ + + G + G+F L +L ++ L IP +L
Sbjct: 136 R-KVPKGVFSGLRNMNCIEMGGNPLENSGFEP--GAFDGLKLNYLRISEAKLT-GIPKDL 191
Query: 218 GMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE-LSNLTKLESLFL 276
+ L + + +I E L +KL L L
Sbjct: 192 --------------------------PETLNELHLDHNKIQ-AIELEDLLRYSKLYRLGL 224
Query: 277 FRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPES 336
NQ+ S + TL+ L L +N+LS +P DLK L+++ L N ++ V +
Sbjct: 225 GHNQIRMIENGSLSFLPTLRELHLDNNKLSR-VPAGLPDLKLLQVVYLHTNNIT-KVGVN 282
Query: 337 -------LVQLPSLEILFIWNNYFS-GSLPENLGRN-SKLRWVDVSTN 375
V+ + ++NN + R + +
Sbjct: 283 DFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNY 330
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 9e-20
Identities = 60/305 (19%), Positives = 102/305 (33%), Gaps = 43/305 (14%)
Query: 106 LNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSV 165
+ S P EI LD+ N+ S + L++L L +N S
Sbjct: 38 VQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIH 94
Query: 166 PAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTH 225
S L L+ L ++ ++ IP SL L + N + ++P +
Sbjct: 95 EKAFSPLRKLQKLYISKNHLVE-IPP--NLPSSLVELRIHDNRIR-KVPKGV-------- 142
Query: 226 MEIGYNFYQGNIPWQLGNMSEVQYLDIAGANL-SGSIPKELSNLTKLESLFLFRNQLAGQ 284
+ + +++ G L + + KL L + +L
Sbjct: 143 ---------------FSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLT-G 186
Query: 285 VPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLE 344
+P + TL L L N++ E L L L +N++ SL LP+L
Sbjct: 187 IPKDL--PETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLR 244
Query: 345 ILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGV-------LFKLILF 397
L + NN S +P L L+ V + TNN + + + LF
Sbjct: 245 ELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNIT-KVGVNDFCPVGFGVKRAYYNGISLF 302
Query: 398 SNNFT 402
+N
Sbjct: 303 NNPVP 307
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 2e-13
Identities = 35/158 (22%), Positives = 64/158 (40%), Gaps = 7/158 (4%)
Query: 248 QYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG 307
+ + + L ++PKE+S L L N ++ +F + L +L L +N++S
Sbjct: 36 RVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISK 92
Query: 308 PIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKL 367
++F+ L+ L+ L + N + +P +L SL L I +N +
Sbjct: 93 IHEKAFSPLRKLQKLYISKNHLV-EIPPNL--PSSLVELRIHDNRIRKVPKGVFSGLRNM 149
Query: 368 RWVDVSTNNF-NGSIPPDICSGGVLFKLILFSNNFTGI 404
+++ N N P G L L + TGI
Sbjct: 150 NCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGI 187
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 2e-11
Identities = 38/218 (17%), Positives = 76/218 (34%), Gaps = 21/218 (9%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNF-SGHFPGGIQSLRNLLVLDAF 157
+ LV+L + N + P +F L ++ +++ N + F G L L
Sbjct: 122 PSSLVELRIHDNRIR-KVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRIS 180
Query: 158 SNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQ-FGSFKSLEFLHLAGNLLNDQIPAE 216
+ +P ++ E L L+L + I + + L L L N + I
Sbjct: 181 EAKLT-GIPKDL--PETLNELHLDHNKIQA-IELEDLLRYSKLYRLGLGHNQIRM-IENG 235
Query: 217 -LGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE-------LSNL 268
L L T+ + + N +P L ++ +Q + + N++ +
Sbjct: 236 SLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNIT-KVGVNDFCPVGFGVKR 293
Query: 269 TKLESLFLFRNQLAGQV--PWEFSRVTTLKSLDLSDNR 304
+ LF N + P F VT ++ + +
Sbjct: 294 AYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 2e-08
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Query: 271 LESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS 330
L + L VP E S TT LDL +N +S + F L++L L L+ N++S
Sbjct: 35 LRVVQCSDLGLK-AVPKEISPDTT--LLDLQNNDISELRKDDFKGLQHLYALVLVNNKIS 91
Query: 331 GTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSG-G 389
++ L L+ L+I N+ +P NL + L + + N +P + SG
Sbjct: 92 KIHEKAFSPLRKLQKLYISKNHLV-EIPPNLPSS--LVELRIHDNRIR-KVPKGVFSGLR 147
Query: 390 VLFKLILFSNNFT 402
+ + + N
Sbjct: 148 NMNCIEMGGNPLE 160
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 96.1 bits (239), Expect = 5e-21
Identities = 56/285 (19%), Positives = 99/285 (34%), Gaps = 16/285 (5%)
Query: 81 NLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNL---TSLISLDISRNNF 137
L S L +L +L L++ + + I L T++ IS
Sbjct: 200 VLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKL 259
Query: 138 SG-----HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQ 192
G F SL+ L + S+ F ++ + N S
Sbjct: 260 QGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLC 319
Query: 193 FGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLG---NMSEVQY 249
L + NLL D + G L + + + N + + M +Q
Sbjct: 320 PSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLK-ELSKIAEMTTQMKSLQQ 378
Query: 250 LDIAGANLSGSIPKEL-SNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGP 308
LDI+ ++S K S L SL + N L + +K LDL N++
Sbjct: 379 LDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPP--RIKVLDLHSNKIKS- 435
Query: 309 IPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYF 353
IP+ L+ L+ L++ N++ +L SL+ +++ N +
Sbjct: 436 IPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPW 480
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 96.1 bits (239), Expect = 5e-21
Identities = 57/325 (17%), Positives = 107/325 (32%), Gaps = 23/325 (7%)
Query: 103 LVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSF 161
L L+LS N+F + F N++ L L +S + I L VL ++
Sbjct: 92 LKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETY 151
Query: 162 SGSVPAE---ISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG 218
E E L ++ F + + +LE ++ L +++ L
Sbjct: 152 GEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLS 211
Query: 219 MLKTVTHMEIGYNFY--QGNIPW-------QLGNMSEVQYLDIAGANLSGSIPKEL---- 265
+L + N W QL + V Y I+ L G +
Sbjct: 212 ILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYS 271
Query: 266 -SNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSL 324
++L L + + + + + + + + + + + L
Sbjct: 272 GTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDF 331
Query: 325 MYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLG---RNSKLRWVDVSTNNFNGSI 381
N ++ TV E+ L LE L + N L + + L+ +D+S N+ +
Sbjct: 332 SNNLLTDTVFENCGHLTELETLILQMNQLK-ELSKIAEMTTQMKSLQQLDISQNSVSYDE 390
Query: 382 PPDICSG-GVLFKLILFSNNFTGIV 405
CS L L + SN T +
Sbjct: 391 KKGDCSWTKSLLSLNMSSNILTDTI 415
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 76.8 bits (189), Expect = 7e-15
Identities = 60/342 (17%), Positives = 107/342 (31%), Gaps = 47/342 (13%)
Query: 106 LNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSV 165
LN+S N S + +I +L+ L L IS N + + L LD N +
Sbjct: 26 LNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KI 84
Query: 166 PAEISQLEHLKVLNLAG-SYFSGPIPSQFGSFKSLEFLHLAGNLL--------------- 209
+LK L+L+ ++ + PI +FG+ L+FL L+ L
Sbjct: 85 S--CHPTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISK 142
Query: 210 -------NDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG--- 259
+ L+ + F + ++S ++ +N+
Sbjct: 143 VLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLE 202
Query: 260 --------SIPKELSNLTKLESLFLFRNQLAGQVPWE---FSRVTTLKSLDLSDNRLSGP 308
SI +L KL +L L + TT+ +S+ +L G
Sbjct: 203 DNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQ 262
Query: 309 IPESFAD-----LKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGR 363
+ D LK L + ++ + ++ I + +
Sbjct: 263 LDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSK 322
Query: 364 NSKLRWVDVSTNNFNGSIPPDICSG-GVLFKLILFSNNFTGI 404
S +D S N + C L LIL N +
Sbjct: 323 ISPFLHLDFSNNLL-TDTVFENCGHLTELETLILQMNQLKEL 363
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 68.0 bits (166), Expect = 4e-12
Identities = 46/294 (15%), Positives = 98/294 (33%), Gaps = 24/294 (8%)
Query: 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS 160
+E + ++ S N P ++ L+IS+N S + I SL L +L N
Sbjct: 1 SEFL-VDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNR 56
Query: 161 FSGSVPAEI-SQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLND-QIPAELG 218
+ + + L+ L+L+ + I +L+ L L+ N + I E G
Sbjct: 57 IQ-YLDISVFKFNQELEYLDLSHNKLVK-IS--CHPTVNLKHLDLSFNAFDALPICKEFG 112
Query: 219 MLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE-LSNL--TKLESLF 275
+ + + + + + + +++ + L + G E L + L +F
Sbjct: 113 NMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVF 172
Query: 276 LFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNL------RLLSLMYNEM 329
+ + V L+ ++ + L L L+L E
Sbjct: 173 PTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIET 232
Query: 330 SGTVPESLVQLP---SLEILFIWNNYFSGSLPENL--GRNSKLRWVDVSTNNFN 378
+ ++QL ++ I N G L + L+ + + +
Sbjct: 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSD 286
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 61.0 bits (148), Expect = 8e-10
Identities = 48/280 (17%), Positives = 89/280 (31%), Gaps = 44/280 (15%)
Query: 128 ISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSG 187
+D S+N H P + + +L+ N S ++I L L++L ++ +
Sbjct: 3 FLVDRSKNGLI-HVPKDL--SQKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQY 59
Query: 188 PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEV 247
S F + LE+L L+ N L I + H+++ +N +
Sbjct: 60 LDISVFKFNQELEYLDLSHNKLVK-IS--CHPTVNLKHLDLSFNAFD------------- 103
Query: 248 QYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG 307
+ I KE N+++L+ L L L + + K L +
Sbjct: 104 ----------ALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYG- 152
Query: 308 PIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKL 367
E L++ SL +V + E FI + L +
Sbjct: 153 -EKEDPEGLQDFNTESL-----------HIVFPTNKEFHFILDVSVKTVANLELSNIKCV 200
Query: 368 RWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIVMF 407
+ + SI + + L L L + T
Sbjct: 201 LEDNKCSYFL--SILAKLQTNPKLSNLTLNNIETTWNSFI 238
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 92.1 bits (229), Expect = 1e-20
Identities = 52/262 (19%), Positives = 106/262 (40%), Gaps = 21/262 (8%)
Query: 123 NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182
L + I + ++N + L + L AF + ++ + L +L L L
Sbjct: 17 ALANAIKIAAGKSNVTD--TVTQADLDGITTLSAFGTGVT-TIEG-VQYLNNLIGLELKD 72
Query: 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLG 242
+ + P + + L L+GN L + + A + L+++ +++ P L
Sbjct: 73 NQITDLAP--LKNLTKITELELSGNPLKN-VSA-IAGLQSIKTLDLTSTQITDVTP--LA 126
Query: 243 NMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSD 302
+S +Q L + ++ +I L+ LT L+ L + Q++ P + ++ L +L D
Sbjct: 127 GLSNLQVLYLDLNQIT-NIS-PLAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADD 182
Query: 303 NRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLG 362
N++S A L NL + L N++ + L +L I+ + N + + +
Sbjct: 183 NKISD--ISPLASLPNLIEVHLKNNQI--SDVSPLANTSNLFIVTLTNQTITN---QPVF 235
Query: 363 RNSKLRWVDVSTNNFNGSIPPD 384
N+ L +V I P
Sbjct: 236 YNNNLVVPNVVKGPSGAPIAPA 257
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 89.4 bits (222), Expect = 1e-19
Identities = 57/306 (18%), Positives = 112/306 (36%), Gaps = 21/306 (6%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
+ + ++ + V +L + +L + G +Q L NL+ L+ N
Sbjct: 18 LANAIKIAAGKSNVTD--TVTQADLDGITTLSAFGTGVT-TIEG-VQYLNNLIGLELKDN 73
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ P + L + L L+G+ +S++ L L + D P L
Sbjct: 74 QITDLAP--LKNLTKITELELSGNPLKNVSA--IAGLQSIKTLDLTSTQITDVTP--LAG 127
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
L + + + N NI L ++ +QYL I A +S + L+NL+KL +L N
Sbjct: 128 LSNLQVLYLDLNQIT-NIS-PLAGLTNLQYLSIGNAQVS-DLT-PLANLSKLTTLKADDN 183
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339
+++ P + + L + L +N++S A+ NL +++L ++
Sbjct: 184 KISDISP--LASLPNLIEVHLKNNQISDV--SPLANTSNLFIVTLTNQTITNQPVFYNNN 239
Query: 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSN 399
L + + P + N ++ T N I + +
Sbjct: 240 LVVP--NVVKGPSGAPIAPATISDNGTYASPNL-TWNLTSFINNVSYTFNQSVTFKNTTV 296
Query: 400 NFTGIV 405
F+G V
Sbjct: 297 PFSGTV 302
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 1e-20
Identities = 53/263 (20%), Positives = 94/263 (35%), Gaps = 48/263 (18%)
Query: 470 GITVSVKKIEWGATRI--KIVSEFITRIG---TVRHKNLIRLLGFCYNRHQAYLLYDYLP 524
G V+VK + + ++H N+I L G C L+ ++
Sbjct: 30 GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFAR 89
Query: 525 NGNLSEKIRTKR-DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH- 582
G L+ + KR + +ARG+ +LH + I H DLK+SNI+ + +E
Sbjct: 90 GGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGD 149
Query: 583 -------LAEFGF-KYLTQLADGSFPAKIAWT--ESGEFYNAMKEEMY---MDVYGFGEI 629
+ +FG + + S AW E ++ M+ DV+ +G +
Sbjct: 150 LSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPE------VIRASMFSKGSDVWSYG-V 202
Query: 630 IL-EILTNGRLTNAGSSLQNKPIDGL-----LGEMYNENE-VGSSSSLQDEIKLVLDVAL 682
+L E+LT P G+ + + S+ + ++
Sbjct: 203 LLWELLTG-----------EVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLM---E 248
Query: 683 LCTRSTPSDRPSMEEALKLLSGL 705
C P RPS L L+ +
Sbjct: 249 DCWNPDPHSRPSFTNILDQLTTI 271
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 92.0 bits (229), Expect = 2e-20
Identities = 58/264 (21%), Positives = 102/264 (38%), Gaps = 55/264 (20%)
Query: 470 GITVSVKKIEWGATRIKIVSEFITRIG---TVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526
G V+VK + + V+EF+ + +RH N++ +G ++ +YL G
Sbjct: 60 GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG 119
Query: 527 NL-----SEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 581
+L R + D + + VA+G+ +LH+ P I H +LK+ N++ D+
Sbjct: 120 SLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN-RNPPIVHRNLKSPNLLVDKKYTV 178
Query: 582 HLAEFG---FKYLTQLADGSFPAKIAWTESGEFYNA---MKEEMY---MDVYGFGEIIL- 631
+ +FG K T L+ S W A +++E DVY FG +IL
Sbjct: 179 KVCDFGLSRLKASTFLSSKSAAGTPEWM-------APEVLRDEPSNEKSDVYSFG-VILW 230
Query: 632 EILTNGRLTNAGSSLQNKPIDGL-----LGEMYNENE-----VGSSSSLQDEIKLVLDVA 681
E+ T +P L + + + + + + I+
Sbjct: 231 ELATL-----------QQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIE------ 273
Query: 682 LLCTRSTPSDRPSMEEALKLLSGL 705
C + P RPS + LL L
Sbjct: 274 -GCWTNEPWKRPSFATIMDLLRPL 296
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 2e-20
Identities = 59/263 (22%), Positives = 104/263 (39%), Gaps = 57/263 (21%)
Query: 470 GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529
V++K+IE + R + E + ++ V H N+++L G C + L+ +Y G+L
Sbjct: 31 AKDVAIKQIESESERKAFIVE-LRQLSRVNHPNIVKLYGAC--LNPVCLVMEYAEGGSLY 87
Query: 530 EKIRTKR-----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME-PHL 583
+ A L ++G+ +LH A+ H DLK N++ +
Sbjct: 88 NVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKI 147
Query: 584 AEFGF-----KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM--------DVYGFGEII 630
+FG ++T GS AW M E++ DV+ +G I+
Sbjct: 148 CDFGTACDIQTHMTNNK-GSA----AW---------MAPEVFEGSNYSEKCDVFSWGIIL 193
Query: 631 LEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSS-------SSLQDEIKLVLDVALL 683
E++T KP D + G + + +L I+ ++
Sbjct: 194 WEVITR-----------RKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMT---R 239
Query: 684 CTRSTPSDRPSMEEALKLLSGLK 706
C PS RPSMEE +K+++ L
Sbjct: 240 CWSKDPSQRPSMEEIVKIMTHLM 262
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 93.7 bits (233), Expect = 2e-20
Identities = 72/336 (21%), Positives = 123/336 (36%), Gaps = 37/336 (11%)
Query: 102 ELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGI-QSLRNLLVLDAFSN 159
+L L + + F L+SLI L + N F G L NL VL
Sbjct: 55 DLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFL-QLETGAFNGLANLEVLTLTQC 113
Query: 160 SF-SGSVPAEI-SQLEHLKVLNLAGSYFSGPIP-SQFGSFKSLEFLHLAGNLLNDQIPAE 216
+ + L L++L L + P S F + + L L N + I E
Sbjct: 114 NLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKV-KSICEE 172
Query: 217 -LGML--KTVTHMEIGYNFYQGNIPWQLG--------NMSEVQYLDIAGANLSGSIPKEL 265
L K T + + Q + LG + + LD++G S+ K
Sbjct: 173 DLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRF 232
Query: 266 SNL---TKLESLFLFRNQLAGQ----------VPWEFSR--VTTLKSLDLSDNRLSGPIP 310
+ TK++SL L + G + F + +K+ DLS +++ +
Sbjct: 233 FDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLK 292
Query: 311 ESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN-SKLRW 369
F+ +L L+L NE++ + L L L + N+ S+ + N KL
Sbjct: 293 SVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLG-SIDSRMFENLDKLEV 351
Query: 370 VDVSTNNFNGSIPPDICSG-GVLFKLILFSNNFTGI 404
+D+S N+ ++ G L +L L +N +
Sbjct: 352 LDLSYNHI-RALGDQSFLGLPNLKELALDTNQLKSV 386
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 86.3 bits (214), Expect = 6e-18
Identities = 65/303 (21%), Positives = 104/303 (34%), Gaps = 56/303 (18%)
Query: 103 LVDLNLSHNSFSGQF-PVEIF-NLTSLISLDISRNNFSGHFPGGI-QSLRNLLVLDAFSN 159
L L L+ + G F LTSL L + NN P ++R VLD N
Sbjct: 105 LEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFN 164
Query: 160 SFSGSVPAEI---SQLEHLKVLNLAGSY--------FSGPIPSQFGSFKSLEFLHLAGNL 208
S+ E Q +H +L L+ S+ L L+GN
Sbjct: 165 KVK-SICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNG 223
Query: 209 LNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGN---------------MSEVQYLDIA 253
+ + T ++ N+ G+ S V+ D++
Sbjct: 224 FKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLS 283
Query: 254 G---ANLSGSIPKELSNL---------------------TKLESLFLFRNQLAGQVPWEF 289
L S+ ++L T L L L +N L F
Sbjct: 284 KSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMF 343
Query: 290 SRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPES-LVQLPSLEILFI 348
+ L+ LDLS N + +SF L NL+ L+L N++ +VP+ +L SL+ +++
Sbjct: 344 ENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLK-SVPDGIFDRLTSLQKIWL 402
Query: 349 WNN 351
N
Sbjct: 403 HTN 405
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 78.2 bits (193), Expect = 2e-15
Identities = 43/309 (13%), Positives = 92/309 (29%), Gaps = 53/309 (17%)
Query: 125 TSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEI-SQLEHLKVLNLAGS 183
+ +D+S N+ + L++L L + + L L +L L +
Sbjct: 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYN 89
Query: 184 YFSGPIPSQFGSFKSLEFLHLAGNLLND-QIPAELGMLKTVTHMEIGYNFYQGNIPWQLG 242
F F +LE L L L+ +
Sbjct: 90 QFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNF-----------------------FK 126
Query: 243 NMSEVQYLDIAGANLSGSIPKEL-SNLTKLESLFLFRNQLAGQVPWEFSRVTTL------ 295
++ ++ L + N+ P N+ + L L N++ +
Sbjct: 127 PLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLR 186
Query: 296 ----KSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPE---SLVQLPSLEILFI 348
D+++ L + ++ L L N ++ + + ++ L +
Sbjct: 187 LSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLIL 246
Query: 349 WNNYFSG-SLPENLGRN-----------SKLRWVDVSTNNFNGSIPPDICSGGV-LFKLI 395
N+Y G S ++ S ++ D+S + ++ + S L +L
Sbjct: 247 SNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIF-ALLKSVFSHFTDLEQLT 305
Query: 396 LFSNNFTGI 404
L N I
Sbjct: 306 LAQNEINKI 314
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 2e-05
Identities = 41/227 (18%), Positives = 77/227 (33%), Gaps = 33/227 (14%)
Query: 81 NLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISL---------- 130
+++ L G P + + L+LS N F F+ + +
Sbjct: 194 DMNEYWLGWEKCGNPFK--NTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYN 251
Query: 131 ---DISRNNFSGHFPGGIQSLR--NLLVLDAFSNSFSGSVPAEI-SQLEHLKVLNLAGSY 184
NF + L + D + ++ + S L+ L LA +
Sbjct: 252 MGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIF-ALLKSVFSHFTDLEQLTLAQNE 310
Query: 185 FSGPIPSQ-FGSFKSLEFLHLAGNLLNDQIPAEL-GMLKTVTHMEIGYNFYQGNIPWQL- 241
+ I F L L+L+ N L I + + L + +++ YN + + Q
Sbjct: 311 IN-KIDDNAFWGLTHLLKLNLSQNFL-GSIDSRMFENLDKLEVLDLSYNHIR-ALGDQSF 367
Query: 242 GNMSEVQYLDIAGANLSGSIPKE-LSNLTKLESLFLFRNQLAGQVPW 287
+ ++ L + L S+P LT L+ ++L N PW
Sbjct: 368 LGLPNLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTN------PW 407
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 89.4 bits (222), Expect = 1e-19
Identities = 56/284 (19%), Positives = 95/284 (33%), Gaps = 60/284 (21%)
Query: 470 GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN----RHQAYLLYDYLPN 525
G V+VK I + +RH+N++ + Q YL+ DY N
Sbjct: 60 GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHEN 119
Query: 526 GNLSEKIRTKR-DWAAKYKIVLGVARGLCFLH-----HDCYPAIPHGDLKASNIVFDENM 579
G+L + +++ D + K+ GLC LH PAI H DLK+ NI+ +N
Sbjct: 120 GSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNG 179
Query: 580 EPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEM----YM-------------- 621
+A+ G A +++ E + YM
Sbjct: 180 TCCIADLGL------------AVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHF 227
Query: 622 ------DVYGFGEIIL-EILTNGRLTNAGSSLQN-----KPIDGLLGEMY----NEN--- 662
D+Y FG +IL E+ Q P D +M +
Sbjct: 228 QSYIMADMYSFG-LILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRP 286
Query: 663 EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706
+ S + ++ + + C P+ R + K L+ +
Sbjct: 287 SFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMS 330
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 88.5 bits (220), Expect = 2e-19
Identities = 53/250 (21%), Positives = 95/250 (38%), Gaps = 27/250 (10%)
Query: 472 TVSVKKIEWGATRIKIVSEFITRIGT---VRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528
V+VK + A + + F +G RH N++ +G+ Q ++ + +L
Sbjct: 48 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSL 106
Query: 529 SEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 585
+ + I ARG+ +LH +I H DLK++NI E+ + +
Sbjct: 107 YHHLHASETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGD 163
Query: 586 FG---FKYLTQLADGSFPAK--IAWTESGEFYNAMKEEMY---MDVYGFGEIIL-EILTN 636
FG K + I W + E Y DVY FG I+L E++T
Sbjct: 164 FGLATEKSRWSGSHQFEQLSGSILWM-APEVIRMQDSNPYSFQSDVYAFG-IVLYELMT- 220
Query: 637 GRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI-KLVLDVALLCTRSTPSDRPSM 695
G+L + + D ++ + + S ++ K + + C + +RPS
Sbjct: 221 GQLPYSNIN----NRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSF 276
Query: 696 EEALKLLSGL 705
L + L
Sbjct: 277 PRILAEIEEL 286
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 86.6 bits (215), Expect = 9e-19
Identities = 50/269 (18%), Positives = 87/269 (32%), Gaps = 48/269 (17%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525
TG + +K++ + F+ + + H N+++ +G Y + + +Y+
Sbjct: 34 TGEVMVMKELIRFDE--ETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKG 91
Query: 526 GNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 582
G L I++ W+ + +A G+ +LH I H DL + N + EN
Sbjct: 92 GTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNI--I-HRDLNSHNCLVRENKNVV 148
Query: 583 LAEFGF--------KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM--------DVYGF 626
+A+FG L P + M EM DV+ F
Sbjct: 149 VADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSF 208
Query: 627 GEIIL-EILTNGRLTNAGSSLQNKPIDGLLGEMYNEN-EVGSSSSLQDEI-----KLVLD 679
G I+L EI+ L + + L
Sbjct: 209 G-IVLCEIIGRVN-----------ADPDYL--PRTMDFGLNVRGFLDRYCPPNCPPSFFP 254
Query: 680 VALLCTRSTPSDRPSMEEALKLLSGLKPH 708
+ + C P RPS + L L+ H
Sbjct: 255 ITVRCCDLDPEKRPSFVKLEHWLETLRMH 283
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 1e-18
Identities = 34/185 (18%), Positives = 65/185 (35%), Gaps = 10/185 (5%)
Query: 195 SFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAG 254
+FK+ L + + A++ ++T++ + + ++ L I
Sbjct: 21 TFKAYLNGLLGQSSTANITEAQM---NSLTYITLANINVTDLTG--IEYAHNIKDLTINN 75
Query: 255 ANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFA 314
+ + P +S L+ LE L + + S +T+L LD+S + I
Sbjct: 76 IHATNYNP--ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKIN 133
Query: 315 DLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVST 374
L + + L YN T L LP L+ L I + + KL + +
Sbjct: 134 TLPKVNSIDLSYNGAI-TDIMPLKTLPELKSLNIQFDGVHDY--RGIEDFPKLNQLYAFS 190
Query: 375 NNFNG 379
G
Sbjct: 191 QTIGG 195
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 78.1 bits (193), Expect = 9e-17
Identities = 31/208 (14%), Positives = 70/208 (33%), Gaps = 34/208 (16%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
F ++ L +S + + + SL + ++ N + GI+ N+ L +
Sbjct: 22 FKAYLNGLLGQSSTA---NITEAQMNSLTYITLANINVTD--LTGIEYAHNIKDLTINNI 76
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ + L +LE L + G + L
Sbjct: 77 --------HATNYNPISGL------------------SNLERLRIMGKDVTSDKIPNLSG 110
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
L ++T ++I ++ + +I ++ + +V +D++ I L L +L+SL + +
Sbjct: 111 LTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI-MPLKTLPELKSLNIQFD 169
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSG 307
+ L L + G
Sbjct: 170 GVHDYRG--IEDFPKLNQLYAFSQTIGG 195
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 7e-14
Identities = 22/118 (18%), Positives = 45/118 (38%), Gaps = 4/118 (3%)
Query: 266 SNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLM 325
+ + L + L + +K L +++ + + L NL L +M
Sbjct: 41 AQMNSLTYITLANINVTDLTG--IEYAHNIKDLTINNIHATNY--NPISGLSNLERLRIM 96
Query: 326 YNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPP 383
+++ +L L SL +L I ++ S+ + K+ +D+S N I P
Sbjct: 97 GKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMP 154
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 86.4 bits (214), Expect = 2e-18
Identities = 58/281 (20%), Positives = 95/281 (33%), Gaps = 54/281 (19%)
Query: 470 GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----QAYLLYDYLPN 525
G V+VK R I + +RH+N++ + + Q +L+ DY +
Sbjct: 65 GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH 124
Query: 526 GNLSEKIRTKR-DWAAKYKIVLGVARGLCFLHHD-----CYPAIPHGDLKASNIVFDENM 579
G+L + + K+ L A GL LH + PAI H DLK+ NI+ +N
Sbjct: 125 GSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG 184
Query: 580 EPHLAEFGF-KYLTQLADGSFPAKIAWT--------ESGEFYNAMKEEMY---MDVYGFG 627
+A+ G D A E + MK D+Y G
Sbjct: 185 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG 244
Query: 628 EIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD-------- 679
+ EI R + G + Y + V S S+++ K+V +
Sbjct: 245 LVFWEIAR--RCSIGGIHEDYQL-------PY-YDLVPSDPSVEEMRKVVCEQKLRPNIP 294
Query: 680 -----------VALLCTR---STPSDRPSMEEALKLLSGLK 706
+A + + + R + K LS L
Sbjct: 295 NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 335
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 88.0 bits (218), Expect = 2e-18
Identities = 56/329 (17%), Positives = 119/329 (36%), Gaps = 23/329 (6%)
Query: 80 INLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG 139
L + +L + + N L L LS+ + + + S ++ + N +
Sbjct: 197 TVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVT- 255
Query: 140 HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN--LAGSYFSGPIPSQFGSFK 197
L+++ S +E+L + N + + K
Sbjct: 256 --------LQHIETTWKCSVKLFQFF--WPRPVEYLNIYNLTITERIDREEFTYSETALK 305
Query: 198 SLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANL 257
SL H+ + A + + + + + S +L+
Sbjct: 306 SLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVF 365
Query: 258 SGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRL----SGPIPESF 313
+ S+ + S L +L++L L RN L + SL+ D L S +
Sbjct: 366 TDSVFQGCSTLKRLQTLILQRNGLK-NFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTC 424
Query: 314 ADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVS 373
A +++ +L+L N ++G+V L P +++L + NN S+P+++ L+ ++V+
Sbjct: 425 AWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVA 481
Query: 374 TNNFNGSIPPDICSG-GVLFKLILFSNNF 401
+N S+P + L + L N +
Sbjct: 482 SNQLK-SVPDGVFDRLTSLQYIWLHDNPW 509
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 81.8 bits (202), Expect = 2e-16
Identities = 64/323 (19%), Positives = 103/323 (31%), Gaps = 21/323 (6%)
Query: 103 LVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSF 161
L L+LS N F + F NLT L L +S F + L +L +
Sbjct: 123 LRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYH 182
Query: 162 SGSVPAEISQLEHLKVLNLAGSY---FSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG 218
E Q+ + VL+L FS + + L+ ++ N N Q
Sbjct: 183 IKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFL 242
Query: 219 MLKTVTHMEIGYNFYQGNIPW-------QLGNMSEVQYLDIAGANLSGSIPKELSNLTKL 271
T + W Q V+YL+I ++ I +E ++
Sbjct: 243 SELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSET 302
Query: 272 ESLFLFRNQLAGQV-----PWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMY 326
L + QV +S + LS + + L+
Sbjct: 303 ALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQ 362
Query: 327 NEMSGTVPESLVQLPSLEILFIWNNYFSGSLPE---NLGRNSKLRWVDVSTNNFNGSIPP 383
N + +V + L L+ L + N + + S L +DVS N+ N
Sbjct: 363 NVFTDSVFQGCSTLKRLQTLILQRNGLK-NFFKVALMTKNMSSLETLDVSLNSLNSHAYD 421
Query: 384 DICSG-GVLFKLILFSNNFTGIV 405
C+ + L L SN TG V
Sbjct: 422 RTCAWAESILVLNLSSNMLTGSV 444
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 56.0 bits (135), Expect = 3e-08
Identities = 47/287 (16%), Positives = 97/287 (33%), Gaps = 23/287 (8%)
Query: 106 LNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSV 165
++ S+ + + P ++ +L +S+N+ S I L L VL N S+
Sbjct: 36 VDYSNRNLT-HVPKDL--PPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIR-SL 91
Query: 166 PAEI-SQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP--AELGMLKT 222
+ + L+ L+++ + I SL L L+ N D +P E G L
Sbjct: 92 DFHVFLFNQDLEYLDVSHNRLQN-IS--CCPMASLRHLDLSFNDF-DVLPVCKEFGNLTK 147
Query: 223 VTHMEIGYNFYQGNIPWQLGNMSEVQ-YLDIAGANLSGSIPKELSNLTKLESLFLFRNQL 281
+T + + ++ + ++ LD+ ++ G + L L L +
Sbjct: 148 LTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIP-NTTVLHLVFHPN 206
Query: 282 AGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADL-----KNLRLLSLMYNEMSGTVPE- 335
+ V L L LS+ +L+ + + LL++ + T
Sbjct: 207 SLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCS 266
Query: 336 ----SLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFN 378
+E L I+N + + S+ + +
Sbjct: 267 VKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVK 313
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 54.1 bits (130), Expect = 1e-07
Identities = 31/139 (22%), Positives = 60/139 (43%), Gaps = 9/139 (6%)
Query: 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNL 319
+PK+L + ++L L +N ++ + S ++ L+ L LS NR+ F ++L
Sbjct: 45 HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDL 102
Query: 320 RLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPEN--LGRNSKLRWVDVSTNNF 377
L + +N + + + SL L + N F LP G +KL ++ +S F
Sbjct: 103 EYLDVSHNRLQ-NISCC--PMASLRHLDLSFNDFD-VLPVCKEFGNLTKLTFLGLSAAKF 158
Query: 378 NGSIPPDICSGGVLFKLIL 396
+ + L ++L
Sbjct: 159 R-QLDLLPVAHLHLSCILL 176
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 5e-18
Identities = 53/293 (18%), Positives = 98/293 (33%), Gaps = 80/293 (27%)
Query: 470 GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFC----YNRHQAYLLYDYLPN 525
G V+VK + + +RH+N++ + ++ Q +L+ Y
Sbjct: 31 GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEM 90
Query: 526 GNLSEKIRTKR-DWAAKYKIVLGVARGLCFLHHDCY-----PAIPHGDLKASNIVFDENM 579
G+L + ++ D + +IVL +A GL LH + + PAI H DLK+ NI+ +N
Sbjct: 91 GSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG 150
Query: 580 EPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEM----YM-------------- 621
+ +A+ G A + + + + YM
Sbjct: 151 QCCIADLGL------------AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCF 198
Query: 622 ------DVYGFGEIIL-EILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674
D++ FG ++L E+ + + V + S +D
Sbjct: 199 DSYKRVDIWAFG-LVLWEVARRMVSNGIVEDYK----------PPFYDVVPNDPSFEDMR 247
Query: 675 KLVLD--------------------VALL--CTRSTPSDRPSMEEALKLLSGL 705
K+V L+ C PS R + K L+ +
Sbjct: 248 KVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 83.5 bits (207), Expect = 7e-18
Identities = 62/271 (22%), Positives = 107/271 (39%), Gaps = 58/271 (21%)
Query: 468 PTGITVSVKKIEWG-----ATRIKIVSEFITRIG---TVRHKNLIRLLGFCYNRHQAYLL 519
V++K + G I+ EF + + H N+++L G +N ++
Sbjct: 42 KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN--PPRMV 99
Query: 520 YDYLPNGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD 576
+++P G+L ++ K W+ K +++L +A G+ ++ + P I H DL++ NI
Sbjct: 100 MEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQ 158
Query: 577 ENMEPH-----LAEFGF-----KYLTQLADGSFPAKIAWTESGEFYNAMKEEMY---MDV 623
E +A+FG ++ L G+F W + E A +EE Y D
Sbjct: 159 SLDENAPVCAKVADFGLSQQSVHSVSGLL-GNF----QWM-APETIGA-EEESYTEKADT 211
Query: 624 YGFGEIIL-EILTNGRLTNAGSSLQNKPIDGL-LGEMYNENEVGSS-------SSLQDEI 674
Y F +IL ILT P D G++ N + +
Sbjct: 212 YSFA-MILYTILTG-----------EGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRL 259
Query: 675 KLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705
+ V++ LC P RP +K LS L
Sbjct: 260 RNVIE---LCWSGDPKKRPHFSYIVKELSEL 287
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 84.4 bits (208), Expect = 4e-17
Identities = 54/254 (21%), Positives = 103/254 (40%), Gaps = 24/254 (9%)
Query: 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN--- 159
+ + FP + I ++ + + + L ++ + A ++
Sbjct: 1 MGETITVSTPIKQIFPDD--AFAETIKDNLKKKSVTD--AVTQNELNSIDQIIANNSDIK 56
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
S G I L ++ L L G+ + I + K+L +L L N + D + + L
Sbjct: 57 SVQG-----IQYLPNVTKLFLNGNKLTD-I-KPLTNLKNLGWLFLDENKIKD-LSS-LKD 107
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
LK + + + +N +I L ++ +++ L + ++ LS LTKL++L L N
Sbjct: 108 LKKLKSLSLEHNGIS-DING-LVHLPQLESLYLGNNKITDITV--LSRLTKLDTLSLEDN 163
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339
Q++ VP + +T L++L LS N +S + A LKNL +L L E
Sbjct: 164 QISDIVP--LAGLTKLQNLYLSKNHIS--DLRALAGLKNLDVLELFSQECLNKPINHQSN 219
Query: 340 LPSLEILFIWNNYF 353
L + +
Sbjct: 220 LVVPNTVKNTDGSL 233
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 74.0 bits (181), Expect = 8e-14
Identities = 42/206 (20%), Positives = 79/206 (38%), Gaps = 16/206 (7%)
Query: 199 LEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS 258
+ + P + + ++ + + +++
Sbjct: 1 MGETITVSTPIKQIFP--DDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK 56
Query: 259 GSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKN 318
S+ + + L + LFL N+L P + + L L L +N++ + S DLK
Sbjct: 57 -SV-QGIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-L-SSLKDLKK 110
Query: 319 LRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFN 378
L+ LSL +N + + LV LP LE L++ NN + L R +KL + + N +
Sbjct: 111 LKSLSLEHNGI--SDINGLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQIS 166
Query: 379 GSIPPDICSGGVLFKLILFSNNFTGI 404
I P + L L L N+ + +
Sbjct: 167 -DIVP-LAGLTKLQNLYLSKNHISDL 190
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 72.4 bits (177), Expect = 2e-13
Identities = 50/262 (19%), Positives = 102/262 (38%), Gaps = 17/262 (6%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
N + + +++ ++ L ++ L ++ N + P + +L+NL L N
Sbjct: 42 LNSIDQIIANNSDIKSVQGIQ--YLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDEN 97
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ L+ LK L+L + S I LE L+L N + D I L
Sbjct: 98 KIKDLSS--LKDLKKLKSLSLEHNGISD-ING-LVHLPQLESLYLGNNKITD-ITV-LSR 151
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
L + + + N +I L ++++Q L ++ ++S + + L+ L L+ L LF
Sbjct: 152 LTKLDTLSLEDNQIS-DIV-PLAGLTKLQNLYLSKNHIS-DL-RALAGLKNLDVLELFSQ 207
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339
+ + S + ++ +D L P S D + ++ ++ T S +
Sbjct: 208 ECLNKPINHQSNLVVPNTVKNTDGSLVTPEIIS--DDGDYEKPNVKWHLPEFTNEVSFIF 265
Query: 340 LPSLEILFIWNNYFSGSLPENL 361
+ I F G + + L
Sbjct: 266 YQPVTIGKA-KARFHGRVTQPL 286
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 82.5 bits (204), Expect = 4e-17
Identities = 51/238 (21%), Positives = 94/238 (39%), Gaps = 17/238 (7%)
Query: 103 LVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSF 161
L L L+ N + + F +L SL LD+S N S + L +L L+ N +
Sbjct: 78 LQALVLTSNGIN-TIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPY 136
Query: 162 SGSVPAEI-SQLEHLKVLNLAGSYFSGPIPSQ-FGSFKSLEFLHLAGNLLNDQIPAE-LG 218
+ S L L++L + I + F LE L + + L + L
Sbjct: 137 KTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQS-YEPKSLK 195
Query: 219 MLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELS--------NLTK 270
++ V+H+ + + + + S V+ L++ +L ELS
Sbjct: 196 SIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFT 255
Query: 271 LESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPES-FADLKNLRLLSLMYN 327
++ + L QV ++++ L L+ S N+L +P+ F L +L+ + L N
Sbjct: 256 FRNVKITDESLF-QVMKLLNQISGLLELEFSRNQLKS-VPDGIFDRLTSLQKIWLHTN 311
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 81.3 bits (201), Expect = 1e-16
Identities = 50/268 (18%), Positives = 97/268 (36%), Gaps = 21/268 (7%)
Query: 99 FFNELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGI-QSLRNLLVLDA 156
+ L+LS+N + +L +L ++ N + SL +L LD
Sbjct: 50 LTEAVKSLDLSNNRIT-YISNSDLQRCVNLQALVLTSNGIN-TIEEDSFSSLGSLEHLDL 107
Query: 157 FSNSFSGSVPAEI-SQLEHLKVLNLAG-SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP 214
N S ++ + L L LNL G Y + S F L+ L + +I
Sbjct: 108 SYNYLS-NLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQ 166
Query: 215 AE-LGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKEL-SNLTKLE 272
+ L + +EI + Q P L ++ V +L + + + + +E
Sbjct: 167 RKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVE 225
Query: 273 SLFLFRNQLAGQ--------VPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSL 324
L L L + T +++ ++D L + + + L L
Sbjct: 226 CLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF-QVMKLLNQISGLLELEF 284
Query: 325 MYNEMSGTVPESLVQ-LPSLEILFIWNN 351
N++ +VP+ + L SL+ +++ N
Sbjct: 285 SRNQLK-SVPDGIFDRLTSLQKIWLHTN 311
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 77.1 bits (190), Expect = 3e-15
Identities = 49/260 (18%), Positives = 109/260 (41%), Gaps = 20/260 (7%)
Query: 158 SNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAEL 217
S S + S+P+ ++ E +K L+L+ + + S +L+ L L N +N I +
Sbjct: 40 SGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINT-IEEDS 95
Query: 218 -GMLKTVTHMEIGYNFYQGNIPWQL-GNMSEVQYLDIAGANLSGSIPKE--LSNLTKLES 273
L ++ H+++ YN+ N+ +S + +L++ G ++ + S+LTKL+
Sbjct: 96 FSSLGSLEHLDLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQI 153
Query: 274 LFLFRNQLAGQVPWE-FSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGT 332
L + ++ + F+ +T L+ L++ + L P+S ++N+ L L +
Sbjct: 154 LRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILL 213
Query: 333 VPESLVQLPSLEILFIWNNYFSG----SLPE----NLGRNSKLRWVDVSTNNFNGSIPPD 384
+ + S+E L + + L +L + R V ++ + +
Sbjct: 214 LEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF-QVMKL 272
Query: 385 ICSGGVLFKLILFSNNFTGI 404
+ L +L N +
Sbjct: 273 LNQISGLLELEFSRNQLKSV 292
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 79.8 bits (197), Expect = 2e-16
Identities = 39/189 (20%), Positives = 81/189 (42%), Gaps = 8/189 (4%)
Query: 164 SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV 223
++P ++ + +L+L+ + + + L L+L L ++ + L +
Sbjct: 24 ALPPDL--PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQVDGT-LPVL 79
Query: 224 THMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKEL-SNLTKLESLFLFRNQLA 282
+++ +N Q ++P + + LD++ L+ S+P L +L+ L+L N+L
Sbjct: 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELK 137
Query: 283 GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPS 342
P + L+ L L++N L+ L+NL L L N + T+P+
Sbjct: 138 TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHL 196
Query: 343 LEILFIWNN 351
L F+ N
Sbjct: 197 LPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 9e-11
Identities = 57/268 (21%), Positives = 86/268 (32%), Gaps = 67/268 (25%)
Query: 62 ACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEI 121
C V ++ V N + L+ ALP + + L+LS N F +
Sbjct: 3 ICE---VSKVASHLEV---NCDKRNLT-ALPP---DLPKD-TTILHLSENLLY-TFSLAT 50
Query: 122 F-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180
T L L++ R + G +L L LD N S+P L L VL++
Sbjct: 51 LMPYTRLTQLNLDRAELTKLQVDG--TLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107
Query: 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQ 240
+ + + L+ L+L GN L +P L
Sbjct: 108 SFNRLTSLPLGALRGLGELQELYLKGNELKT-LPPGL----------------------- 143
Query: 241 LGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWE-FSRVTTLKSLD 299
L+ KLE L L N L ++P + + L +L
Sbjct: 144 ------------------------LTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLL 178
Query: 300 LSDNRLSGPIPESFADLKNLRLLSLMYN 327
L +N L IP+ F L L N
Sbjct: 179 LQENSLYT-IPKGFFGSHLLPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 33/140 (23%), Positives = 53/140 (37%), Gaps = 10/140 (7%)
Query: 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSF 161
L L+LSHN P+ L +L LD+S N + G ++ L L L N
Sbjct: 78 VLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNEL 136
Query: 162 SGSVPAEI-SQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGML 220
++P + + L+ L+LA + + ++L+ L L N L IP
Sbjct: 137 K-TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYT-IPKGFFGS 194
Query: 221 KTVTHMEIGYNFYQGNIPWQ 240
+ + N PW
Sbjct: 195 HLLPFAFLHGN------PWL 208
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 80.7 bits (199), Expect = 2e-16
Identities = 47/176 (26%), Positives = 70/176 (39%), Gaps = 18/176 (10%)
Query: 236 NIPWQLGNMSEVQYLDIAGANLSGSIPKE--LSNLTKLESLFLFRNQLAGQVPWEFSRVT 293
++P S LD++ NLS + E + LT L SL L N L F V
Sbjct: 36 SLP------SYTALLDLSHNNLS-RLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVP 88
Query: 294 TLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYF 353
L+ LDLS N L F+DL+ L +L L N + + + L+ L++ N
Sbjct: 89 NLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQI 148
Query: 354 SGSLPE----NLGRNSKLRWVDVSTNNFNGSIPPDICSG---GVLFKLILFSNNFT 402
S P + + KL +D+S+N +P V L L +N
Sbjct: 149 S-RFPVELIKDGNKLPKLMLLDLSSNKLK-KLPLTDLQKLPAWVKNGLYLHNNPLE 202
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 49.1 bits (117), Expect = 2e-06
Identities = 44/207 (21%), Positives = 68/207 (32%), Gaps = 56/207 (27%)
Query: 106 LNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGS 164
L+LSHN+ S LT+L SL +S N+ + + NL LD SN
Sbjct: 44 LDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN----- 98
Query: 165 VPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVT 224
L L F ++LE L L N + +
Sbjct: 99 ------HLHTLD-------------EFLFSDLQALEVLLLYNNHI-VVVDRNA------- 131
Query: 225 HMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE----LSNLTKLESLFLFRNQ 280
+M+++Q L ++ +S P E + L KL L L N+
Sbjct: 132 ----------------FEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNK 174
Query: 281 LAGQVPWEFSRVTTLK--SLDLSDNRL 305
L + ++ L L +N L
Sbjct: 175 LKKLPLTDLQKLPAWVKNGLYLHNNPL 201
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 45.6 bits (108), Expect = 3e-05
Identities = 40/209 (19%), Positives = 67/209 (32%), Gaps = 23/209 (11%)
Query: 101 NELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGI-QSLRNLLVLDAFS 158
L L LSHN + E F + +L LD+S N+ + L+ L VL ++
Sbjct: 64 TNLHSLLLSHNHLN-FISSEAFVPVPNLRYLDLSSNHLH-TLDEFLFSDLQALEVLLLYN 121
Query: 159 NSFSGSVPAEI-SQLEHLKVLNLAG---SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP 214
N V + L+ L L+ S F + L L L+ N L
Sbjct: 122 NHIV-VVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPL 180
Query: 215 AELGMLKTVTHMEIGYNFYQGNIPWQ--------LGNMSEVQYLDIAG--ANLSGSIPKE 264
+L L + + N P + + Q + +L K+
Sbjct: 181 TDLQKLPAWVKNGLYLH---NN-PLECDCKLYQLFSHWQYRQLSSVMDFQEDLYCMHSKK 236
Query: 265 LSNLTKLESLFLFRNQLAGQVPWEFSRVT 293
L N+ L+ + + +T
Sbjct: 237 LHNIFSLDFFNCSEYKESAWEAHLGDTLT 265
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 3e-16
Identities = 41/260 (15%), Positives = 86/260 (33%), Gaps = 40/260 (15%)
Query: 472 TVSVKKIEWGATRIKIVSEFITRIGT---VRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528
V+++ I+ + F + RH+N++ +G C + ++ L
Sbjct: 57 EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTL 116
Query: 529 SEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 585
+R + D +I + +G+ +LH I H DLK+ N+ +D N + + +
Sbjct: 117 YSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITD 172
Query: 586 FG---FKYLTQLADGSFPAK-----IAWT-----ESGEFYNAMKEEMY---MDVYGFGEI 629
FG + Q + + + + DV+ G
Sbjct: 173 FGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALG-T 231
Query: 630 IL-EILTNGRLTNAGSSLQNKPIDGLLGEMY--NENEVGSSSSLQDEIKLVLDVALLCTR 686
I E+ + I +G N +++G + D + C
Sbjct: 232 IWYELHA-REWPFKTQPAEA--IIWQMGTGMKPNLSQIGMGKEISDILL-------FCWA 281
Query: 687 STPSDRPSMEEALKLLSGLK 706
+RP+ + + +L L
Sbjct: 282 FEQEERPTFTKLMDMLEKLP 301
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 76.5 bits (189), Expect = 1e-15
Identities = 51/243 (20%), Positives = 83/243 (34%), Gaps = 50/243 (20%)
Query: 164 SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV 223
+P + K L+L+ + F SF L+ L L+ + I
Sbjct: 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT-IED-------- 69
Query: 224 THMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKEL-SNLTKLESLFLFRNQLA 282
L ++ L + G + S+ S L+ L+ L LA
Sbjct: 70 ------------GAYQSLSHL---STLILTGNPIQ-SLALGAFSGLSSLQKLVAVETNLA 113
Query: 283 GQVPWEFSRVTTLKSLDLSDNRL-SGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLP 341
+ + TLK L+++ N + S +PE F++L NL L L N++ L L
Sbjct: 114 SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLH 173
Query: 342 SLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNF 401
+ +L N L D+S N N I P L +L L +N
Sbjct: 174 QMPLL-----------------NLSL---DLSLNPMN-FIQPGAFKEIRLKELALDTNQL 212
Query: 402 TGI 404
+
Sbjct: 213 KSV 215
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 3e-14
Identities = 55/253 (21%), Positives = 90/253 (35%), Gaps = 58/253 (22%)
Query: 106 LNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGS 164
L+LS N F + L LD+SR G QSL +L L N S
Sbjct: 33 LDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ-S 90
Query: 165 VPAEI-SQLEHLKVLNLAGSYFSGPIPSQ-FGSFKSLEFLHLAGNLLNDQIPAELGMLKT 222
+ S L L+ L + + + + G K+L+ L++A NL+
Sbjct: 91 LALGAFSGLSSLQKLVAVETNLAS-LENFPIGHLKTLKELNVAHNLI------------- 136
Query: 223 VTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLA 282
Q + SNLT LE L L N++
Sbjct: 137 -------------------------QSFKLPEY---------FSNLTNLEHLDLSSNKIQ 162
Query: 283 GQVPWEFSRVTTLK----SLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLV 338
+ + + SLDLS N ++ P +F ++ L+ L+L N++
Sbjct: 163 SIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLKELALDTNQLKSVPDGIFD 221
Query: 339 QLPSLEILFIWNN 351
+L SL+ +++ N
Sbjct: 222 RLTSLQKIWLHTN 234
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 75.5 bits (186), Expect = 4e-15
Identities = 52/256 (20%), Positives = 94/256 (36%), Gaps = 25/256 (9%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
F E + NL S + L S+ + + ++ G IQ L N+ L N
Sbjct: 23 FAETIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSDIK-SVQG-IQYLPNVTKLFLNGN 78
Query: 160 SFSGSVPAEISQLEHLKVLNLAG---SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAE 216
+ P ++ L++L L L S K L+ L L N ++D I
Sbjct: 79 KLTDIKP--LANLKNLGWLFLDENKVKDLSS-----LKDLKKLKSLSLEHNGISD-ING- 129
Query: 217 LGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFL 276
L L + + +G N +I L ++++ L + +S I L+ LTKL++L+L
Sbjct: 130 LVHLPQLESLYLGNN-KITDIT-VLSRLTKLDTLSLEDNQIS-DIV-PLAGLTKLQNLYL 185
Query: 277 FRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPES 336
+N + + + L L+L ++L + + PE
Sbjct: 186 SKNHI--SDLRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSL--VTPEI 241
Query: 337 LVQLPSLEILFI-WNN 351
+ E + W+
Sbjct: 242 ISDDGDYEKPNVKWHL 257
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 9e-15
Identities = 57/254 (22%), Positives = 106/254 (41%), Gaps = 18/254 (7%)
Query: 123 NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182
I ++ + + + L ++ + A ++ SV I L ++ L L G
Sbjct: 22 AFAETIKDNLKKKSVTD--AVTQNELNSIDQIIANNSDIK-SVQG-IQYLPNVTKLFLNG 77
Query: 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLG 242
+ + I + K+L +L L N + D + + L LK + + + +N +I L
Sbjct: 78 NKLTD-I-KPLANLKNLGWLFLDENKVKD-LSS-LKDLKKLKSLSLEHNGIS-DIN-GLV 131
Query: 243 NMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSD 302
++ +++ L + ++ LS LTKL++L L NQ++ VP + +T L++L LS
Sbjct: 132 HLPQLESLYLGNNKITDITV--LSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSK 187
Query: 303 NRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLG 362
N +S + A LKNL +L L E L + N S PE +
Sbjct: 188 NHISD--LRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTV--KNTDGSLVTPEIIS 243
Query: 363 RNSKLRWVDVSTNN 376
+ +V +
Sbjct: 244 DDGDYEKPNVKWHL 257
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 6e-07
Identities = 18/112 (16%), Positives = 43/112 (38%), Gaps = 8/112 (7%)
Query: 265 LSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSL 324
+ L + + V + + ++ + +++ + + + L N+ L L
Sbjct: 20 DDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-V-QGIQYLPNVTKLFL 75
Query: 325 MYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNN 376
N+++ + L L +L LF+ N L +L KL+ + + N
Sbjct: 76 NGNKLTDI--KPLANLKNLGWLFLDENKVK-DL-SSLKDLKKLKSLSLEHNG 123
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 76.4 bits (188), Expect = 4e-15
Identities = 44/260 (16%), Positives = 84/260 (32%), Gaps = 36/260 (13%)
Query: 99 FFNELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGI-QSLRNLLVLDA 156
++L F L ++IS+N+ + +L L +
Sbjct: 28 LPRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIR- 85
Query: 157 FSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAE 216
I + +L +N P F + +L++L ++ + +P
Sbjct: 86 ------------IEKANNLLYIN----------PEAFQNLPNLQYLLISNTGIK-HLPDV 122
Query: 217 LGM-LKTVTHMEIGYNFYQGNIPWQL--GNMSEVQYLDIAGANLSGSIPKELSNLTKLES 273
+ ++I N I G E L + + I N T+L+
Sbjct: 123 HKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDE 181
Query: 274 LFLFRNQLAGQVPWE-FSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGT 332
L L N ++P + F + LD+S R+ +LK LR S +
Sbjct: 182 LNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLK---K 238
Query: 333 VPESLVQLPSLEILFIWNNY 352
+P +L +L +L +
Sbjct: 239 LP-TLEKLVALMEASLTYPS 257
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 71.8 bits (176), Expect = 1e-13
Identities = 33/161 (20%), Positives = 59/161 (36%), Gaps = 7/161 (4%)
Query: 245 SEVQYLDIAGANLSGSIPKE-LSNLTKLESLFLFRNQLAGQVPWE-FSRVTTLKSLDLSD 302
L L I K S LE + + +N + + + FS + L + +
Sbjct: 30 RNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88
Query: 303 -NRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENL 361
N L PE+F +L NL+ L + + + +L I +N ++ N
Sbjct: 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNS 148
Query: 362 --GRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNN 400
G + + + ++ N I +G L +L L NN
Sbjct: 149 FVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNN 188
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 64.8 bits (158), Expect = 2e-11
Identities = 34/160 (21%), Positives = 59/160 (36%), Gaps = 9/160 (5%)
Query: 250 LDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPI 309
+ ++ IP +L L +L FS L+ +++S N + I
Sbjct: 14 FLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVI 70
Query: 310 PES-FADLKNLRLLSLM-YNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNS-K 366
F++L L + + N + PE+ LP+L+ L I N LP+ +S +
Sbjct: 71 EADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIK-HLPDVHKIHSLQ 129
Query: 367 LRWVDVSTNNFNGSIPPDICSG--GVLFKLILFSNNFTGI 404
+D+ N +I + G L L N I
Sbjct: 130 KVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEI 169
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 62.5 bits (152), Expect = 1e-10
Identities = 38/226 (16%), Positives = 72/226 (31%), Gaps = 13/226 (5%)
Query: 164 SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAE-LGMLKT 222
+P+++ + + L + F F LE + ++ N + + I A+ L
Sbjct: 23 EIPSDLPR--NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPK 80
Query: 223 VTHMEIGYNFYQGNIPWQ-LGNMSEVQYLDIAGANLSGSIPKEL-SNLTKLESLFLFRNQ 280
+ + I I + N+ +QYL I+ + +P + + L + N
Sbjct: 81 LHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIK-HLPDVHKIHSLQKVLLDIQDNI 139
Query: 281 LAGQVPWE-FSRVTT-LKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLV 338
+ F ++ L L+ N + +F + L N + +
Sbjct: 140 NIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFH 199
Query: 339 QLPSLEILFIWNNYFSGSLPENLGRN-SKLRWVDVSTNNFNGSIPP 383
IL I SLP N KLR +P
Sbjct: 200 GASGPVILDISRTRIH-SLPSYGLENLKKLRARS---TYNLKKLPT 241
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 76.7 bits (188), Expect = 9e-15
Identities = 49/299 (16%), Positives = 98/299 (32%), Gaps = 27/299 (9%)
Query: 61 YACSWSGVKCNKNNTIVVGINLSMKGLSGALP---GKPLRIFFNELVDLNLSHNSFSGQF 117
+ W + V +L L+ LP + + + + L + +
Sbjct: 283 LSVEWRTPDGRNRPSHVWLCDLPAASLNDQLPQHTFRVIWTGSDSQKECVLLKDRPE-CW 341
Query: 118 PVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKV 177
+ L ++S S ++S + L L+ + ++ + L+ L
Sbjct: 342 CRDSATDEQLFRCELS-VEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLY 400
Query: 178 LNLAGSYFSGPIPSQFGSFKSLEFLHLAG-----NLLNDQIPAELGMLKTVTHMEIGYNF 232
YFS + K+++ + A + + V + + +
Sbjct: 401 EKETLQYFS--------TLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKD 452
Query: 233 YQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRV 292
+ L + V +LD++ L ++P L+ L LE L N L V + +
Sbjct: 453 LT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANL 507
Query: 293 TTLKSLDLSDNRLSG-PIPESFADLKNLRLLSLMYNEMSGTVPES---LVQLPSLEILF 347
L+ L L +NRL + L LL+L N + LPS+ +
Sbjct: 508 PRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSIL 566
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 69.0 bits (168), Expect = 3e-12
Identities = 52/357 (14%), Positives = 107/357 (29%), Gaps = 41/357 (11%)
Query: 25 DPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYAC-SWSGVKCNKNNTIVVGINLS 83
DP ++ L+ + C S ++ T+++ ++ +
Sbjct: 222 DPNDQSAWFYHRWLLGRAEPHDVLCCVHVSREEACLSVCFSRPLTVGSRMGTLLLMVDEA 281
Query: 84 MKGLSGALPG---KPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGH 140
+ P +P ++ +L +L+ F V S + ++
Sbjct: 282 PLSVEWRTPDGRNRPSHVWLCDLPAASLNDQLPQHTFRVIWTGSDSQKECVLLKDRPEC- 340
Query: 141 FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLE 200
+ + L + S S + +E+ + L+ L + + ++L+
Sbjct: 341 WCRDSATDEQLFRCE-LSVEKSTVLQSELESCKELQELEPENKWCL---LTIILLMRALD 396
Query: 201 FLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS 260
L L + LK V M Y +
Sbjct: 397 PL-----LYEKETLQYFSTLKAVDPMRAAYLDDLRS-------------------KFLLE 432
Query: 261 IPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLR 320
+ L L L + ++ + LDLS NRL +P + A L+ L
Sbjct: 433 NSVLKMEYADVRVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLRA-LPPALAALRCLE 489
Query: 321 LLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPE--NLGRNSKLRWVDVSTN 375
+L N + + + LP L+ L + NN L +L +++ N
Sbjct: 490 VLQASDNAL--ENVDGVANLPRLQELLLCNNRLQ-QSAAIQPLVSCPRLVLLNLQGN 543
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 45.5 bits (107), Expect = 5e-05
Identities = 27/192 (14%), Positives = 53/192 (27%), Gaps = 41/192 (21%)
Query: 190 PSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQY 249
+ + L L+ + +EL K + +E + I + + + Y
Sbjct: 342 CRDSATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLY 400
Query: 250 LDIAGANLSGSIPKELSNLTKLESL-----FLFRNQLAGQVPWEFSRVTTLKSLDLSDNR 304
+ S L ++ + R++ + ++ L L+
Sbjct: 401 EK--------ETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKD 452
Query: 305 LSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN 364
L TV L QL + L + +N +LP L
Sbjct: 453 L--------------------------TVLCHLEQLLLVTHLDLSHNRLR-ALPPALAAL 485
Query: 365 SKLRWVDVSTNN 376
L + S N
Sbjct: 486 RCLEVLQASDNA 497
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 72.5 bits (177), Expect = 7e-14
Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 2/95 (2%)
Query: 260 SIPKELSNLTKLESLFLFRNQLAGQVPWE-FSRVTTLKSLDLSDNRLSGPIPESFADLKN 318
L L L++ Q + + L++L + + L P++F
Sbjct: 22 DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPR 81
Query: 319 LRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYF 353
L L+L +N + ++ VQ SL+ L + N
Sbjct: 82 LSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 54.7 bits (131), Expect = 5e-08
Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 4/102 (3%)
Query: 303 NRLSGPIPESFADLKNLRLLSLMYNEMSGTVP-ESLVQLPSLEILFIWNNYFSGSLPENL 361
+ +NL L + + + L L L L I + + +
Sbjct: 17 RDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDA 75
Query: 362 GRN-SKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFT 402
+L +++S N S+ G L +L+L N
Sbjct: 76 FHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPLH 116
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 45.5 bits (107), Expect = 3e-05
Identities = 20/95 (21%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Query: 213 IPAELGMLKTVTHMEIGYNFYQGNIPWQ-LGNMSEVQYLDIAGANLSGSIPKE-LSNLTK 270
L + +T + I + ++ + L + E++ L I + L + + +
Sbjct: 23 SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDAFHFTPR 81
Query: 271 LESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRL 305
L L L N L + W+ + +L+ L LS N L
Sbjct: 82 LSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 42.4 bits (99), Expect = 4e-04
Identities = 19/95 (20%), Positives = 30/95 (31%), Gaps = 4/95 (4%)
Query: 118 PVEIFNLTSLISLDISRNNFSGHFPGG-IQSLRNLLVLDAFSNSFSGSVPAEI-SQLEHL 175
+ +L L I H ++ L L L + V + L
Sbjct: 24 LHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDAFHFTPRL 82
Query: 176 KVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLN 210
LNL+ + SL+ L L+GN L+
Sbjct: 83 SRLNLSFNALESLSWKTVQGL-SLQELVLSGNPLH 116
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 1e-12
Identities = 38/251 (15%), Positives = 80/251 (31%), Gaps = 36/251 (14%)
Query: 80 INLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFS 138
++ K + +P P L L P F NL ++ + +S +
Sbjct: 16 FRVTCKDIQ-RIPSLP-----PSTQTLKLIETHLR-TIPSHAFSNLPNISRIYVSIDVTL 68
Query: 139 GHFPGGI-QSLRNLLVLDAFSNSFSGSVPAEI-SQLEHLKVLNLAGSYFSG-PIPSQFGS 195
+L + ++ + + + +L LK L + + P ++ S
Sbjct: 69 QQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKMFPDLTKVYS 128
Query: 196 FKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGA 255
L + N IP + + +E L +
Sbjct: 129 TDIFFILEITDNPYMTSIPV--NAFQGLC--------------------NETLTLKLYNN 166
Query: 256 NLSGSIPKELSNLTKLESLFLFRNQLAGQVPWE-FSRVTT-LKSLDLSDNRLSGPIPESF 313
+ S+ N TKL++++L +N+ + + F V + LD+S ++ +
Sbjct: 167 GFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSKGL 225
Query: 314 ADLKNLRLLSL 324
LK L +
Sbjct: 226 EHLKELIARNT 236
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 3e-12
Identities = 27/169 (15%), Positives = 60/169 (35%), Gaps = 8/169 (4%)
Query: 243 NMSEVQYLDIAGANLSGSIPKEL-SNLTKLESLFLFRNQLAGQVPWE-FSRVTTLKSLDL 300
N+ + + ++ + NL+K+ + + + + + + LK L +
Sbjct: 53 NLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGI 112
Query: 301 SDNRLSG-PIPESFADLKNLRLLSLMYNEMSGTVPE-SLVQLPS-LEILFIWNNYFSGSL 357
+ L P +L + N ++P + L + L ++NN F+ S+
Sbjct: 113 FNTGLKMFPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SV 171
Query: 358 PENLGRNSKLRWVDVSTNNFNGSIPPDICSG--GVLFKLILFSNNFTGI 404
+KL V ++ N + I D G L + + T +
Sbjct: 172 QGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL 220
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 2e-12
Identities = 56/357 (15%), Positives = 111/357 (31%), Gaps = 67/357 (18%)
Query: 103 LVDLNLSHNSFSGQFPVEIFNL-----TSLISLDISRNNFS----GHFPGGIQSLRNLLV 153
L +LNL N + + L + + G +++L L
Sbjct: 58 LAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQE 117
Query: 154 LDAFSNSFSGSVPAEISQLE-----HLKVLNLAGSYFSGPIPSQFGSF----KSLEFLHL 204
L N + + + L+ L L S S + L +
Sbjct: 118 LHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTV 177
Query: 205 AGNLLNDQIPAELG-MLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS----G 259
+ N +N+ L LK + +++ L + ++
Sbjct: 178 SNNDINEAGVRVLCQGLKD--------------------SPCQLEALKLESCGVTSDNCR 217
Query: 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRV-----TTLKSLDLSDNRLSGP----IP 310
+ +++ L L L N+L E + L++L + + ++ +
Sbjct: 218 DLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLC 277
Query: 311 ESFADLKNLRLLSLMYNEMSGTVPESLVQL-----PSLEILFIWNNYFSG----SLPENL 361
++L+ LSL NE+ L + LE L++ + F+ L
Sbjct: 278 RVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVL 337
Query: 362 GRNSKLRWVDVSTNNFNGSIPPDICSG-----GVLFKLILFSNNFTGI-VMFIAAAL 412
+N L + +S N + ++C G VL L L + + +AA L
Sbjct: 338 AQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATL 394
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 2e-09
Identities = 59/327 (18%), Positives = 103/327 (31%), Gaps = 52/327 (15%)
Query: 103 LVDLNLSHNSFSGQFPVEIF-----NLTSLISLDISRNNFS----GHFPGGIQSLRNLLV 153
L +L+LS N + L L + + S +++ +
Sbjct: 115 LQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKE 174
Query: 154 LDAFSNSFSGSVPAEISQ-LEH----LKVLNLAGSYFS----GPIPSQFGSFKSLEFLHL 204
L +N + + + Q L+ L+ L L + + S SL L L
Sbjct: 175 LTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELAL 234
Query: 205 AGNLLNDQ-----IPAELGMLKTVTHMEIGYNFYQGNIPWQ-----LGNMSEVQYLDIAG 254
N L D P L + + I L ++ L +AG
Sbjct: 235 GSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGI-TAKGCGDLCRVLRAKESLKELSLAG 293
Query: 255 ANLSGSIPKELSNL-----TKLESLFLFRNQLAGQVPWEFSRV----TTLKSLDLSDNRL 305
L + L +LESL++ FS V L L +S+NRL
Sbjct: 294 NELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRL 353
Query: 306 SGPIPESFADL-----KNLRLLSLMYNEMS----GTVPESLVQLPSLEILFIWNNYFSGS 356
LR+L L ++S ++ +L+ SL L + NN +
Sbjct: 354 EDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 413
Query: 357 ----LPENLGR-NSKLRWVDVSTNNFN 378
L E++ + L + + ++
Sbjct: 414 GILQLVESVRQPGCLLEQLVLYDIYWS 440
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 1e-08
Identities = 49/321 (15%), Positives = 89/321 (27%), Gaps = 76/321 (23%)
Query: 125 TSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY 184
+ SLDI S L + L+ +V+ L
Sbjct: 3 LDIQSLDIQCEELS---DARWAEL--------------------LPLLQQCQVVRLDDCG 39
Query: 185 FS----GPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG-MLK----TVTHMEIGYNFYQG 235
+ I S +L L+L N L D + L+ + + +
Sbjct: 40 LTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNC---- 95
Query: 236 NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRV--- 292
++ ++ L L L+ L L N L
Sbjct: 96 -------CLTGAGCGVLSST---------LRTLPTLQELHLSDNLLGDAGLQLLCEGLLD 139
Query: 293 --TTLKSLDLSDNRLSGPIPESFADL----KNLRLLSLMYNEMSGTVPESLVQL-----P 341
L+ L L LS E A + + + L++ N+++ L Q
Sbjct: 140 PQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPC 199
Query: 342 SLEILFIWNNYFS----GSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGG-----VLF 392
LE L + + + L + + LR + + +N ++C G L
Sbjct: 200 QLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLR 259
Query: 393 KLILFSNNFTGI-VMFIAAAL 412
L ++ T + L
Sbjct: 260 TLWIWECGITAKGCGDLCRVL 280
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 7e-06
Identities = 45/254 (17%), Positives = 83/254 (32%), Gaps = 41/254 (16%)
Query: 197 KSLEFLHLAGNLLNDQIPAELG-MLKTVTHMEIGYNFYQGNIPWQ--------LGNMSEV 247
++ L + L+D AEL +L+ + + + L +
Sbjct: 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDC----GLTEARCKDISSALRVNPAL 58
Query: 248 QYLDIAGANLSGSIPKEL-----SNLTKLESLFLFRNQL----AGQVPWEFSRVTTLKSL 298
L++ L + + K++ L L L G + + TL+ L
Sbjct: 59 AELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQEL 118
Query: 299 DLSDNRLSGPIPESFADL-----KNLRLLSLMYNEMSGT----VPESLVQLPSLEILFIW 349
LSDN L + + L L L Y +S + L P + L +
Sbjct: 119 HLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVS 178
Query: 350 NNYFSGS----LPENLGRN-SKLRWVDVSTNNFNGSIPPDICSG----GVLFKLILFSNN 400
NN + + L + L + +L + + + D+C L +L L SN
Sbjct: 179 NNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNK 238
Query: 401 FTGI-VMFIAAALL 413
+ + + LL
Sbjct: 239 LGDVGMAELCPGLL 252
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 4e-12
Identities = 56/259 (21%), Positives = 85/259 (32%), Gaps = 62/259 (23%)
Query: 118 PVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKV 177
P I LD+ N S L L +L N ++PA I
Sbjct: 32 PSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGI-------- 80
Query: 178 LNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNI 237
F K+LE L + N L +P +
Sbjct: 81 ---------------FKELKNLETLWVTDNKLQA-LPI--------------------GV 104
Query: 238 PWQLGNMSEVQYLDIAGANLSGSIPKEL-SNLTKLESLFLFRNQLAGQVPWEFSRVTTLK 296
QL N+ L + L S+P + +LTKL L L N+L F ++T+LK
Sbjct: 105 FDQLVNL---AELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLK 160
Query: 297 SLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNN----- 351
L L +N+L +F L L+ L L N++ + L L++L + N
Sbjct: 161 ELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220
Query: 352 -----YFSGSLPENLGRNS 365
Y + L +
Sbjct: 221 CNGIIYMAKWLKKKADEGL 239
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 67.5 bits (165), Expect = 6e-12
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 18/189 (9%)
Query: 470 GITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528
+TV+VK ++ + + E + ++H NL++LLG C Y++ +++ GNL
Sbjct: 245 SLTVAVKTLKEDTMEVEEFLKEAAV-MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 303
Query: 529 SEKIRTKRDWAAKYK----IVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 584
+ +R + ++ + +L + I H +L A N + EN +A
Sbjct: 304 LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF--I-HRNLAARNCLVGENHLVKVA 360
Query: 585 EFGF------KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGR 638
+FG T A FP K WT + E K + DV+ FG ++ EI T G
Sbjct: 361 DFGLSRLMTGDTYTAHAGAKFPIK--WT-APESLAYNKFSIKSDVWAFGVLLWEIATYGM 417
Query: 639 LTNAGSSLQ 647
G L
Sbjct: 418 SPYPGIDLS 426
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 6e-12
Identities = 57/271 (21%), Positives = 90/271 (33%), Gaps = 72/271 (26%)
Query: 471 ITVSVKKIEWGATRIKIVSEFIT--RI-GTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527
V+VK + ++F+ RI H N++RL+G C + Y++ + + G+
Sbjct: 140 TLVAVKSCRETLPP-DLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD 198
Query: 528 LSEKIRTKRD---WAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 584
+RT+ ++V A G+ +L C I H DL A N + E ++
Sbjct: 199 FLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC--I-HRDLAARNCLVTEKNVLKIS 255
Query: 585 EFG-------FKYLTQLADGSFPAKIAWT--ESGEFYNAMKEEMYM---DVYGFGEIIL- 631
+FG Y P K WT E A+ Y DV+ FG I+L
Sbjct: 256 DFGMSREEADGVYAASGGLRQVPVK--WTAPE------ALNYGRYSSESDVWSFG-ILLW 306
Query: 632 EILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL------------- 678
E + G P L S Q + V
Sbjct: 307 ETFSLGA----------SPYPNL--------------SNQQTREFVEKGGRLPCPELCPD 342
Query: 679 ---DVALLCTRSTPSDRPSMEEALKLLSGLK 706
+ C P RPS + L ++
Sbjct: 343 AVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 1e-11
Identities = 29/143 (20%), Positives = 59/143 (41%), Gaps = 6/143 (4%)
Query: 236 NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTL 295
N+P + + + + P S KL + L NQ++ P F + +L
Sbjct: 29 NLP------ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSL 82
Query: 296 KSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSG 355
SL L N+++ F L +L+LL L N+++ ++ L +L +L +++N
Sbjct: 83 NSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQT 142
Query: 356 SLPENLGRNSKLRWVDVSTNNFN 378
++ + ++ N F
Sbjct: 143 IAKGTFSPLRAIQTMHLAQNPFI 165
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 1e-10
Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 6/144 (4%)
Query: 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNL 319
IP L + L +N + P FS L+ +DLS+N++S P++F L++L
Sbjct: 25 EIPTNLPETI--TEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSL 82
Query: 320 RLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN-SKLRWVDVSTNNFN 378
L L N+++ L SL++L + N + L + ++ L + + N
Sbjct: 83 NSLVLYGNKITELPKSLFEGLFSLQLLLLNANKIN-CLRVDAFQDLHNLNLLSLYDNKLQ 141
Query: 379 GSIPPDICSG-GVLFKLILFSNNF 401
+I S + + L N F
Sbjct: 142 -TIAKGTFSPLRAIQTMHLAQNPF 164
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 1e-09
Identities = 34/189 (17%), Positives = 68/189 (35%), Gaps = 52/189 (27%)
Query: 164 SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV 223
+P + E + + L + P F +K L + L+ N + ++ +
Sbjct: 25 EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQI-SELAPDA------ 75
Query: 224 THMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAG 283
F L L SL L+ N++
Sbjct: 76 --------FQG---------------------------------LRSLNSLVLYGNKIT- 93
Query: 284 QVPWE-FSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPS 342
++P F + +L+ L L+ N+++ ++F DL NL LLSL N++ + L +
Sbjct: 94 ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRA 153
Query: 343 LEILFIWNN 351
++ + + N
Sbjct: 154 IQTMHLAQN 162
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 3e-11
Identities = 44/117 (37%), Positives = 59/117 (50%), Gaps = 9/117 (7%)
Query: 236 NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTL 295
IP +V L + G + +PKELSN L + L N+++ FS +T L
Sbjct: 28 GIP------RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQL 80
Query: 296 KSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLV-QLPSLEILFIWNN 351
+L LS NRL P +F LK+LRLLSL N++S VPE L +L L I N
Sbjct: 81 LTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAIGAN 136
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 3e-11
Identities = 56/267 (20%), Positives = 111/267 (41%), Gaps = 45/267 (16%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCY--NRHQAYLLYDYL 523
TG V+VK ++ + +++ I + H+N+++ G C + L+ ++L
Sbjct: 49 TGEQVAVKSLKPESGG-NHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 107
Query: 524 PNGNLSEKIRTKRDWAAKYKIVL---GVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580
P+G+L E + ++ + + + +G+ +L Y + H DL A N++ + +
Sbjct: 108 PSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQY--V-HRDLAARNVLVESEHQ 164
Query: 581 PHLAEFGF--------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFG 627
+ +FG +Y T D P + W E +FY A DV+ FG
Sbjct: 165 VKIGDFGLTKAIETDKEYYTVKDDRDSP--VFWYAPECLMQSKFYIAS------DVWSFG 216
Query: 628 EIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL---------VL 678
+ E+LT ++ +L K I G+M + ++L++ +L V
Sbjct: 217 VTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVT-RL--VNTLKEGKRLPCPPNCPDEVY 273
Query: 679 DVALLCTRSTPSDRPSMEEALKLLSGL 705
+ C PS+R S + ++ L
Sbjct: 274 QLMRKCWEFQPSNRTSFQNLIEGFEAL 300
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 5e-11
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 27/189 (14%)
Query: 463 CKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFC-YNRHQAYLLYD 521
G V+VK I+ AT ++E + +RH NL++LLG + Y++ +
Sbjct: 210 MLGDY-RGNKVAVKCIKNDATAQAFLAEASV-MTQLRHSNLVQLLGVIVEEKGGLYIVTE 267
Query: 522 YLPNGNLSEKIRTKRDWAAKYK----IVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 577
Y+ G+L + +R++ L V + +L + + + H DL A N++ E
Sbjct: 268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF--V-HRDLAARNVLVSE 324
Query: 578 NMEPHLAEFGF--KYLTQLADGSFPAKIAWT--ESGEFYNAMKEEMYM---DVYGFGEII 630
+ +++FG + + G P K WT E A++E+ + DV+ FG I+
Sbjct: 325 DNVAKVSDFGLTKEASSTQDTGKLPVK--WTAPE------ALREKKFSTKSDVWSFG-IL 375
Query: 631 L-EILTNGR 638
L EI + GR
Sbjct: 376 LWEIYSFGR 384
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 6e-11
Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Query: 243 NMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWE-FSRVTTLKSLDLS 301
+ +++ ++ + ++ + + + L N+L V + F + +LK+L L
Sbjct: 55 KLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLEN-VQHKMFKGLESLKTLMLR 113
Query: 302 DNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNN 351
NR++ +SF L ++RLLSL N+++ P + L SL L + N
Sbjct: 114 SNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLAN 163
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 5e-09
Identities = 27/145 (18%), Positives = 56/145 (38%), Gaps = 7/145 (4%)
Query: 260 SIPKELSNLTKLESLFLFRNQLAGQVPW-EFSRVTTLKSLDLSDNRLSGPIPESFADLKN 318
IP+ + T L L N+ F ++ L+ ++ S+N+++ +F
Sbjct: 25 KIPEHIPQYT--AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASG 82
Query: 319 LRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN-SKLRWVDVSTNNF 377
+ + L N + + L SL+ L + +N + + + S +R + + N
Sbjct: 83 VNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRIT-CVGNDSFIGLSSVRLLSLYDNQI 141
Query: 378 NGSIPPDICSG-GVLFKLILFSNNF 401
++ P L L L +N F
Sbjct: 142 T-TVAPGAFDTLHSLSTLNLLANPF 165
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 4e-04
Identities = 34/150 (22%), Positives = 54/150 (36%), Gaps = 14/150 (9%)
Query: 62 ACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEI 121
AC KC T V + S + L+ P +L L++N F+ I
Sbjct: 4 ACP---EKCRCEGTTV---DCSNQKLNKIPEHIPQ-----YTAELRLNNNEFTVLEATGI 52
Query: 122 F-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEI-SQLEHLKVLN 179
F L L ++ S N + G + + + SN +V ++ LE LK L
Sbjct: 53 FKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLE-NVQHKMFKGLESLKTLM 111
Query: 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLL 209
L + + F S+ L L N +
Sbjct: 112 LRSNRITCVGNDSFIGLSSVRLLSLYDNQI 141
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 62.9 bits (153), Expect = 2e-10
Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 21/197 (10%)
Query: 463 CKAVLPTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521
V++K ++ G + E + +RH+ L++L + Y++ +
Sbjct: 201 WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQV-MKKLRHEKLVQLYAVV-SEEPIYIVTE 258
Query: 522 YLPNGNLSEKIRTKRDWAAKYK----IVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 577
Y+ G+L + ++ + + + +A G+ ++ Y + H DL+A+NI+ E
Sbjct: 259 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY--V-HRDLRAANILVGE 315
Query: 578 NMEPHLAEFGF-------KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEII 630
N+ +A+FG +Y T FP K WT + E + + DV+ FG ++
Sbjct: 316 NLVCKVADFGLARLIEDNEY-TARQGAKFPIK--WT-APEAALYGRFTIKSDVWSFGILL 371
Query: 631 LEILTNGRLTNAGSSLQ 647
E+ T GR+ G +
Sbjct: 372 TELTTKGRVPYPGMVNR 388
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 63.0 bits (153), Expect = 2e-10
Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 21/197 (10%)
Query: 463 CKAVLPTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521
V++K ++ G + E + +RH+ L++L + Y++ +
Sbjct: 284 WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQV-MKKLRHEKLVQLYAVV-SEEPIYIVTE 341
Query: 522 YLPNGNLSEKIRTKRDWAAKYK----IVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 577
Y+ G+L + ++ + + + +A G+ ++ Y + H DL+A+NI+ E
Sbjct: 342 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY--V-HRDLRAANILVGE 398
Query: 578 NMEPHLAEFGF-------KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEII 630
N+ +A+FG +Y T FP K WT + E + + DV+ FG ++
Sbjct: 399 NLVCKVADFGLARLIEDNEY-TARQGAKFPIK--WT-APEAALYGRFTIKSDVWSFGILL 454
Query: 631 LEILTNGRLTNAGSSLQ 647
E+ T GR+ G +
Sbjct: 455 TELTTKGRVPYPGMVNR 471
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 2e-10
Identities = 39/186 (20%), Positives = 75/186 (40%), Gaps = 31/186 (16%)
Query: 471 ITVSVKKIEWGATRIKIVSEFIT--RI-GTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527
I V++K++ + K E + + +V + ++ RLLG C L+ +P G
Sbjct: 45 IPVAIKELREATSP-KANKEILDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGC 102
Query: 528 LSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 584
L + +R +D ++ + +A+G+ +L + H DL A N++ +
Sbjct: 103 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL--V-HRDLAARNVLVKTPQHVKIT 159
Query: 585 EFGF-------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGEIILE 632
+FG + G P I W ES + + DV+ +G + E
Sbjct: 160 DFGLAKLLGAEEKEYHAEGGKVP--IKWMALESILHRIYTHQ------SDVWSYGVTVWE 211
Query: 633 ILTNGR 638
++T G
Sbjct: 212 LMTFGS 217
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 61.1 bits (149), Expect = 2e-10
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 27/189 (14%)
Query: 463 CKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCY-NRHQAYLLYD 521
G V+VK I+ AT ++E + + +RH NL++LLG + Y++ +
Sbjct: 38 MLGDY-RGNKVAVKCIKNDATAQAFLAE-ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 95
Query: 522 YLPNGNLSEKIRTKRDWAAKYK----IVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 577
Y+ G+L + +R++ L V + +L + + + H DL A N++ E
Sbjct: 96 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF--V-HRDLAARNVLVSE 152
Query: 578 NMEPHLAEFGF---KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGEI 629
+ +++FG TQ G P K WT E+ +F DV+ FG +
Sbjct: 153 DNVAKVSDFGLTKEASSTQ-DTGKLPVK--WTAPEALREKKFSTK------SDVWSFGIL 203
Query: 630 ILEILTNGR 638
+ EI + GR
Sbjct: 204 LWEIYSFGR 212
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 2e-10
Identities = 57/267 (21%), Positives = 101/267 (37%), Gaps = 46/267 (17%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQA--YLLYDYL 523
TG V+VK+++ +F I + +++ G Y + L+ +YL
Sbjct: 51 TGALVAVKQLQHSGP--DQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 108
Query: 524 PNGNLSEKIRTKRDWAAKYKIVL---GVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580
P+G L + ++ R +++L + +G+ +L + H DL A NI+ +
Sbjct: 109 PSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC--V-HRDLAARNILVESEAH 165
Query: 581 PHLAEFGF-KYLTQLAD-------GSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFG 627
+A+FG K L D G P I W ES F DV+ FG
Sbjct: 166 VKIADFGLAKLLPLDKDYYVVREPGQSP--IFWYAPESLSDNIFSRQS------DVWSFG 217
Query: 628 EIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL---------VL 678
++ E+ T + + S+ + + + L++ +L V
Sbjct: 218 VVLYELFTYCDKSCSPSAEFLRMMGCERDVPALS-RL--LELLEEGQRLPAPPACPAEVH 274
Query: 679 DVALLCTRSTPSDRPSMEEALKLLSGL 705
++ LC +P DRPS L L
Sbjct: 275 ELMKLCWAPSPQDRPSFSALGPQLDML 301
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 61.7 bits (150), Expect = 3e-10
Identities = 58/331 (17%), Positives = 104/331 (31%), Gaps = 91/331 (27%)
Query: 72 KNNTIVVGINLS--------MKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIF- 122
+ V I LS + LS + K +L S F+G+ EI
Sbjct: 29 LEDDSVKEIVLSGNTIGTEAARWLSENIASKK------DLEIAEFSDI-FTGRVKDEIPE 81
Query: 123 ----------NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQL 172
L ++ +S N F P + L + L ++ + L
Sbjct: 82 ALRLLLQALLKCPKLHTVRLSDNAFG---PTAQEPLIDFL--------------SKHTPL 124
Query: 173 EHLKVLN----------LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQ----IPAELG 218
EHL + N +A + + + + L + N L +
Sbjct: 125 EHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQ 184
Query: 219 MLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFR 278
+ + +++ N + G + + L+ +L+ L L
Sbjct: 185 SHRLLHTVKMVQN--------GIRP---------EGI--EHLLLEGLAYCQELKVLDLQD 225
Query: 279 NQLAGQVPWEFSRV----TTLKSLDLSDNRLSGP----IPESFADLKN--LRLLSLMYNE 328
N + L+ L L+D LS + ++F+ L+N L+ L L YNE
Sbjct: 226 NTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNE 285
Query: 329 MSGTVPESLVQ-----LPSLEILFIWNNYFS 354
+ +L +P L L + N FS
Sbjct: 286 IELDAVRTLKTVIDEKMPDLLFLELNGNRFS 316
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 58.6 bits (142), Expect = 3e-09
Identities = 55/334 (16%), Positives = 106/334 (31%), Gaps = 83/334 (24%)
Query: 103 LVDLNLSHNSFSGQFPVEIF----NLTSLISLDISRNNFSGHFPGGIQSL-------RNL 151
+ +L ++ + + +F S+ + +S N + L ++L
Sbjct: 6 IEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIG---TEAARWLSENIASKKDL 62
Query: 152 LVLDAFSNSFSGSVPAEI-----------SQLEHLKVLNLAGSYFSGPIPSQFGSF---- 196
+ + FS+ F+G V EI + L + L+ + F F
Sbjct: 63 EIAE-FSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKH 121
Query: 197 KSLEFLHLAGNLLNDQ-------------IPAELGMLKTVTHMEIGYNFYQGNIPWQLGN 243
LE L+L N L Q + + + + G N +L N
Sbjct: 122 TPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRN--------RLEN 173
Query: 244 MSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQL----AGQVPWE-FSRVTTLKSL 298
K + L ++ + +N + + E + LK L
Sbjct: 174 ---------GSMK---EWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVL 221
Query: 299 DLSDNRLSGP----IPESFADLKNLRLLSLMYNEMS--GTVP--ESLVQL--PSLEILFI 348
DL DN + + + NLR L L +S G ++ +L L+ L +
Sbjct: 222 DLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRL 281
Query: 349 WNNYFSG----SLPENLGRN-SKLRWVDVSTNNF 377
N +L + L +++++ N F
Sbjct: 282 QYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRF 315
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 2e-05
Identities = 47/303 (15%), Positives = 79/303 (26%), Gaps = 71/303 (23%)
Query: 70 CNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNL----T 125
+ I +++ L AL P +L + LS N+F + + T
Sbjct: 69 DIFTGRVKDEIPEALRLLLQALLKCP------KLHTVRLSDNAFGPTAQEPLIDFLSKHT 122
Query: 126 SLISLDISRNNFSGHFPGGIQSL----------------RNLLVLDAFSNSF-SGSVPA- 167
L L + N P + L + N +GS+
Sbjct: 123 PLEHLYLHNNGLG---PQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEW 179
Query: 168 --EISQLEHLKVLNLAGSYF-----SGPIPSQFGSFKSLEFLHLAGNLLNDQ----IPAE 216
L + + + + + L+ L L N +
Sbjct: 180 AKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIA 239
Query: 217 LGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFL 276
L + + + L GA +L N L++L L
Sbjct: 240 LKSWPNLRELGLNDC--------LLSA---------RGAAAVVDAFSKLEN-IGLQTLRL 281
Query: 277 FRNQLAGQVPWEFSRV-----TTLKSLDLSDNRLS------GPIPESFADLKNLRLLSLM 325
N++ V L L+L+ NR S I E F+ L L
Sbjct: 282 QYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVDEIREVFSTRGRGELDELD 341
Query: 326 YNE 328
E
Sbjct: 342 DME 344
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 3e-10
Identities = 41/230 (17%), Positives = 70/230 (30%), Gaps = 39/230 (16%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
V NL S + + L+ + + + +N G+Q NL L N
Sbjct: 18 LANAVKQNLGKQSVTDLVSQK--ELSGVQNFNGDNSNIQS--LAGMQFFTNLKELHLSHN 73
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
S P + L L+ L++ + L L L N L D
Sbjct: 74 QISDLSP--LKDLTKLEELSVNRNRLKNL---NGIPSACLSRLFLDNNELRDTDS----- 123
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
L ++ ++ L I L SI L L+KLE L L N
Sbjct: 124 ---------------------LIHLKNLEILSIRNNKLK-SIV-MLGFLSKLEVLDLHGN 160
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEM 329
++ +R+ + +DL+ + + +L +
Sbjct: 161 EI--TNTGGLTRLKKVNWIDLTGQKCVNEPVKYQPELYITNTVKDPDGRW 208
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 1e-09
Identities = 46/173 (26%), Positives = 70/173 (40%), Gaps = 15/173 (8%)
Query: 204 LAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPK 263
+N P L +G + +S VQ + +N+ S+
Sbjct: 4 QRPTPINQVFP--DPGLANAVKQNLGKQSVTDLVS--QKELSGVQNFNGDNSNIQ-SL-A 57
Query: 264 ELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLS 323
+ T L+ L L NQ++ P +T L+ L ++ NRL + L L
Sbjct: 58 GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKNL---NGIPSACLSRLF 112
Query: 324 LMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNN 376
L NE+ T +SL+ L +LEIL I NN S+ LG SKL +D+ N
Sbjct: 113 LDNNELRDT--DSLIHLKNLEILSIRNNKLK-SI-VMLGFLSKLEVLDLHGNE 161
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 59.9 bits (146), Expect = 6e-10
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 11/96 (11%)
Query: 498 VRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKR----DWAAKYKIVLGVARGLC 553
+RH N++RL G+ ++ + YL+ +Y P G + +++ A Y + +A L
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALS 123
Query: 554 FLH-HDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 588
+ H H D+K N++ E +A+FG+
Sbjct: 124 YCHSKRVI----HRDIKPENLLLGSAGELKIADFGW 155
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 7e-10
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 31/193 (16%)
Query: 463 CKAVLPTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521
A V+VK ++ G+ ++E + T++H L++L + Y++ +
Sbjct: 205 WMATYNKHTKVAVKTMKPGSMSVEAFLAEANV-MKTLQHDKLVKLHAVV-TKEPIYIITE 262
Query: 522 YLPNGNLSEKIRTKRDWAAKYK----IVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 577
++ G+L + +++ +A G+ F+ Y I H DL+A+NI+
Sbjct: 263 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY--I-HRDLRAANILVSA 319
Query: 578 NMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYG 625
++ +A+FG +Y T FP K WT E+ G F DV+
Sbjct: 320 SLVCKIADFGLARVIEDNEY-TAREGAKFPIK--WTAPEAINFGSFTIK------SDVWS 370
Query: 626 FGEIILEILTNGR 638
FG +++EI+T GR
Sbjct: 371 FGILLMEIVTYGR 383
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 7e-10
Identities = 60/271 (22%), Positives = 108/271 (39%), Gaps = 55/271 (20%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYN--RHQAYLLYDYL 523
TG V+VK ++ A + S + I T+ H+++I+ G C + L+ +Y+
Sbjct: 59 TGEMVAVKALKADAGP-QHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYV 117
Query: 524 PNGNLSEKIRTKR-------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD 576
P G+L + + +A + G+ +LH Y I H DL A N++ D
Sbjct: 118 PLGSLRDYLPRHSIGLAQLLLFAQ------QICEGMAYLHAQHY--I-HRDLAARNVLLD 168
Query: 577 ENMEPHLAEFGF--------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDV 623
+ + +FG +Y DG P + W E +FY A DV
Sbjct: 169 NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP--VFWYAPECLKEYKFYYA------SDV 220
Query: 624 YGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL------- 676
+ FG + E+LT+ + + + + I G+M + + L+ +L
Sbjct: 221 WSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVL-RL--TELLERGERLPRPDKCP 277
Query: 677 --VLDVALLCTRSTPSDRPSMEEALKLLSGL 705
V + C + S RP+ E + +L +
Sbjct: 278 AEVYHLMKNCWETEASFRPTFENLIPILKTV 308
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 59.3 bits (144), Expect = 1e-09
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 498 VRHKNLIRLLGFCYNR----HQAYLLYDYLPNGNLSEKIRTKRDWAAKY------KIVLG 547
H N++RL+ +C H+A+LL + G L +I +D ++LG
Sbjct: 83 FNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLG 142
Query: 548 VARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 588
+ RGL +H H DLK +NI+ + +P L + G
Sbjct: 143 ICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGS 180
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 61.0 bits (147), Expect = 1e-09
Identities = 60/384 (15%), Positives = 103/384 (26%), Gaps = 120/384 (31%)
Query: 16 VFVP-AVSANDPYS---EALLSLKSELVDDFNSLHDWFVPPGVNPAGK----IYACS--- 64
VF VS PY +ALL L+ + GV +GK + C
Sbjct: 125 VFAKYNVSRLQPYLKLRQALLELRPA---KNVLID------GVLGSGKTWVALDVCLSYK 175
Query: 65 ----------WSGV-KCNKNNTIVVGIN-----LSMKGLSGALPGKPLRIFFNELVDLNL 108
W + CN T++ + + S + +++ + + L
Sbjct: 176 VQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA-EL 234
Query: 109 SHNSFSGQFPVEIFNLTSLISLD-ISRNNFSGHFPGGIQSL---RNLLVLDAFSNSFSGS 164
S + L+ L + F + L R V D S +
Sbjct: 235 RRLLKSKPYE------NCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLS----AA 284
Query: 165 VPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKT-- 222
IS H L + L + +P E +L T
Sbjct: 285 TTTHISLDHHSMTLTPD---------------EVKSLLLKYLDCRPQDLPRE--VLTTNP 327
Query: 223 -VTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLE------SLF 275
+ I + G W + + L+ I L+ L E L
Sbjct: 328 RRLSI-IAESIRDGLATWD-------NWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS 379
Query: 276 LFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPE 335
+F S IP LLSL++ ++ +
Sbjct: 380 VFPP--------------------------SAHIPTI--------LLSLIWFDVIKSDVM 405
Query: 336 SLV-QLPSLEILFIWNNYFSGSLP 358
+V +L ++ + S+P
Sbjct: 406 VVVNKLHKYSLVEKQPKESTISIP 429
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 58.7 bits (141), Expect = 6e-09
Identities = 113/727 (15%), Positives = 204/727 (28%), Gaps = 239/727 (32%)
Query: 13 IWLVFVPAVSAN-DPY--SEALLS-LKSELVDDFNSLHDWFVPPGVNPAGKIYACSWSGV 68
I VF A N D + S L E +D + + W
Sbjct: 21 ILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHI------IMSK--DAVSGTLRLFW--T 70
Query: 69 KCNKNNTIV---VG--INLSMKGLSGAL------PGKPLRIFFNELVDLNLSHNSFSGQF 117
+K +V V + ++ K L + P R++ + L + F+ ++
Sbjct: 71 LLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFA-KY 129
Query: 118 PV----EIFNL-TSLISLDISRNNFSGHFPGG-------IQSLRNLLVLDAFSN-----S 160
V L +L+ L N G + + V +
Sbjct: 130 NVSRLQPYLKLRQALLELR-PAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLN 188
Query: 161 FSGSVPAEISQLEHLKVL--NLAGSYFSGP-----IPSQFGSFKSLEFLHLAGNLLNDQI 213
+ + + LE L+ L + ++ S I + S ++ E L L +
Sbjct: 189 L-KNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA-ELRRL---LKSKPY 243
Query: 214 PAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYL----DIAGAN-LSGSIPKELS-- 266
L +L V + + W N+S + L + LS + +S
Sbjct: 244 ENCLLVLLNVQNAKA----------WNAFNLS-CKILLTTRFKQVTDFLSAATTTHISLD 292
Query: 267 ----NLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLL 322
LT E L LK LD L P N R L
Sbjct: 293 HHSMTLTPDEVKSLL-----------------LKYLDCRPQDL----PRE-VLTTNPRRL 330
Query: 323 SLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIP 382
S+ + ES+ + W+N+ +++ + ++ S N P
Sbjct: 331 SI--------IAESIRDGLAT-----WDNW------KHVNCDKLTTIIESSLNVLE---P 368
Query: 383 PDICSGGVLFKLILFSNNFTGIVMF-----IAAALLGIFFFRRGGKGHWKMISFLGLPQF 437
+ + F + +F I LL + W + +
Sbjct: 369 AE------------YRKMFDRLSVFPPSAHIPTILLSLI---------W-----FDVIKS 402
Query: 438 TANDVLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGT 497
V+ + S + P T+S+ I ++K+ +E
Sbjct: 403 DVMVVVNKLHK---------YSLVEKQ---PKESTISIPSIYL-ELKVKLENE------Y 443
Query: 498 VRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHH 557
H++++ YN + + D +P + +Y F H
Sbjct: 444 ALHRSIVD----HYNIPKTFDSDDLIP------------PYLDQY-----------FYSH 476
Query: 558 DCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF-PAKI-----AWTESGEF 611
+ H LK + F +L D F KI AW SG
Sbjct: 477 IGH----H--LKNI------EHPERMTLFRMVFL----DFRFLEQKIRHDSTAWNASGSI 520
Query: 612 YNAMKE-EMYMDVY------GFGEIILEILTNGRLTNAGSSLQNKPIDGLL--------G 656
N +++ + Y Y + ++ IL L +L LL
Sbjct: 521 LNTLQQLKFYKP-YICDNDPKYERLVNAILDF--LPKIEENLICSKYTDLLRIALMAEDE 577
Query: 657 EMYNENE 663
++ E
Sbjct: 578 AIFEEAH 584
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 1e-09
Identities = 44/258 (17%), Positives = 92/258 (35%), Gaps = 51/258 (19%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGF----------------CYN 512
G T +K++++ K E + + + H N++ G
Sbjct: 35 DGKTYVIKRVKY--NNEKAERE-VKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSK 91
Query: 513 RHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLG----VARGLCFLHHDCYPAIPHGDL 568
++ ++ G L + I +R + L + +G+ ++H + + DL
Sbjct: 92 TKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDL 148
Query: 569 KASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNA---MKEEMY---MD 622
K SNI + + + +FG T L + + T Y + + + Y +D
Sbjct: 149 KPSNIFLVDTKQVKIGDFGLV--TSLKNDGKRTRSKGT---LRYMSPEQISSQDYGKEVD 203
Query: 623 VYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682
+Y G I+ E+L S DG++ +++ + ++ +L
Sbjct: 204 LYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIF-------DKKEKTLLQKLLSK-- 254
Query: 683 LCTRSTPSDRPSMEEALK 700
P DRP+ E L+
Sbjct: 255 -----KPEDRPNTSEILR 267
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 1e-09
Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 32/186 (17%)
Query: 471 ITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527
+TV+VK ++ V EF+ ++H NL++LLG C Y++ +++ GN
Sbjct: 39 LTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 95
Query: 528 LSEKIRTKRDWAAKYK----IVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 583
L + +R + ++ + +L + I H DL A N + EN +
Sbjct: 96 LLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF--I-HRDLAARNCLVGENHLVKV 152
Query: 584 AEFGF------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGEIILE 632
A+FG T A FP K WT ES +F DV+ FG ++ E
Sbjct: 153 ADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLAYNKFSIK------SDVWAFGVLLWE 204
Query: 633 ILTNGR 638
I T G
Sbjct: 205 IATYGM 210
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 2e-09
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 498 VRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKR----DWAAKYKIVLGVARGLC 553
+RH N++R+ + ++R + YL+ ++ P G L ++++ +A + + +A L
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF--MEELADALH 128
Query: 554 FLH-HDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 588
+ H H D+K N++ E +A+FG+
Sbjct: 129 YCHERKVI----HRDIKPENLLMGYKGELKIADFGW 160
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 2e-09
Identities = 39/186 (20%), Positives = 75/186 (40%), Gaps = 31/186 (16%)
Query: 471 ITVSVKKIEWGATRIKIVSEFIT--RI-GTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527
I V++K++ + K E + + +V + ++ RLLG C L+ +P G
Sbjct: 45 IPVAIKELREATSP-KANKEILDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGC 102
Query: 528 LSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 584
L + +R +D ++ + +A+G+ +L + H DL A N++ +
Sbjct: 103 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL--V-HRDLAARNVLVKTPQHVKIT 159
Query: 585 EFGF-------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGEIILE 632
+FG + G P I W ES + + DV+ +G + E
Sbjct: 160 DFGLAKLLGAEEKEYHAEGGKVP--IKWMALESILHRIYTHQ------SDVWSYGVTVWE 211
Query: 633 ILTNGR 638
++T G
Sbjct: 212 LMTFGS 217
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 57.2 bits (139), Expect = 3e-09
Identities = 47/193 (24%), Positives = 82/193 (42%), Gaps = 31/193 (16%)
Query: 463 CKAVLPTGITVSVKKIEWGATRIKIVSEFIT--RI-GTVRHKNLIRLLGFCYNRHQAYLL 519
V++K I GA +FI + + H L++L G C + L+
Sbjct: 25 HLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 81
Query: 520 YDYLPNGNLSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFD 576
+++ +G LS+ +RT+R A ++ L V G+ +L C I H DL A N +
Sbjct: 82 TEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV--I-HRDLAARNCLVG 138
Query: 577 ENMEPHLAEFGF-KYL-----TQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYG 625
EN +++FG +++ T FP K W E + + DV+
Sbjct: 139 ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK--WASPEVFSFSRYSSK------SDVWS 190
Query: 626 FGEIILEILTNGR 638
FG ++ E+ + G+
Sbjct: 191 FGVLMWEVFSEGK 203
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 5e-09
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 31/186 (16%)
Query: 471 ITVSVKKIEWGATRIKIVSEFIT--RI-GTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527
I V +K IE + R + G++ H +++RLLG C L+ YLP G+
Sbjct: 43 IPVCIKVIEDKSGR-QSFQAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGS 100
Query: 528 LSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 584
L + +R R ++ + +A+G+ +L + H +L A N++ + +A
Sbjct: 101 LLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGM--V-HRNLAARNVLLKSPSQVQVA 157
Query: 585 EFGF-------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGEIILE 632
+FG ++ P K W ES G++ + DV+ +G + E
Sbjct: 158 DFGVADLLPPDDKQLLYSEAKTPIK--WMALESIHFGKYTHQ------SDVWSYGVTVWE 209
Query: 633 ILTNGR 638
++T G
Sbjct: 210 LMTFGA 215
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 5e-09
Identities = 47/255 (18%), Positives = 89/255 (34%), Gaps = 45/255 (17%)
Query: 469 TGITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLG----FCYNRHQAYLLY 520
T + V+ +++ + R + E + ++H N++R + L+
Sbjct: 50 TTVEVAWCELQDRKLTKSERQRFKEE-AEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108
Query: 521 DYLPNGNLSEKI-RTKR-DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-E 577
+ + +G L + R K + +GL FLH P I H DLK NI
Sbjct: 109 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLH-TRTPPIIHRDLKCDNIFITGP 167
Query: 578 NMEPHLAEFGF-KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM-------DVYGFGEI 629
+ + G + + M EMY DVY FG
Sbjct: 168 TGSVKIGDLGLATLKRASFAKAVIGTPEF---------MAPEMYEEKYDESVDVYAFGMC 218
Query: 630 ILEILTN----GRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCT 685
+LE+ T+ NA + + + G+ +++ +++ I+ C
Sbjct: 219 MLEMATSEYPYSECQNA-AQIYRRVTSGVKPASFDKVA---IPEVKEIIE-------GCI 267
Query: 686 RSTPSDRPSMEEALK 700
R +R S+++ L
Sbjct: 268 RQNKDERYSIKDLLN 282
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 6e-09
Identities = 25/131 (19%), Positives = 55/131 (41%), Gaps = 15/131 (11%)
Query: 467 LPTGITVSVK-----KIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521
T + K + R K+ E I+ ++ H++++ GF + +++ +
Sbjct: 63 ADTKEVFAGKIVPKSLLLKPHQREKMSME-ISIHRSLAHQHVVGFHGFFEDNDFVFVVLE 121
Query: 522 YLPNGNLSEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 577
+L E + ++ A Y + + G +LH + + H DLK N+ +E
Sbjct: 122 LCRRRSLLELHKRRKALTEPEARYY--LRQIVLGCQYLHRNR---VIHRDLKLGNLFLNE 176
Query: 578 NMEPHLAEFGF 588
++E + +FG
Sbjct: 177 DLEVKIGDFGL 187
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 6e-09
Identities = 25/131 (19%), Positives = 55/131 (41%), Gaps = 15/131 (11%)
Query: 467 LPTGITVSVK-----KIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521
T + K + R K+ E I+ ++ H++++ GF + +++ +
Sbjct: 37 ADTKEVFAGKIVPKSLLLKPHQREKMSME-ISIHRSLAHQHVVGFHGFFEDNDFVFVVLE 95
Query: 522 YLPNGNLSEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 577
+L E + ++ A Y + + G +LH + + H DLK N+ +E
Sbjct: 96 LCRRRSLLELHKRRKALTEPEARYY--LRQIVLGCQYLHRNR---VIHRDLKLGNLFLNE 150
Query: 578 NMEPHLAEFGF 588
++E + +FG
Sbjct: 151 DLEVKIGDFGL 161
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 6e-09
Identities = 26/132 (19%), Positives = 60/132 (45%), Gaps = 16/132 (12%)
Query: 467 LPTGITVSVK-----KIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521
+ TG+ V++K + ++ +E + ++H +++ L + + + YL+ +
Sbjct: 33 IHTGLEVAIKMIDKKAMYKAGMVQRVQNE-VKIHCQLKHPSILELYNYFEDSNYVYLVLE 91
Query: 522 YLPNGNLSEKIRTKR-----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD 576
NG ++ ++ + + A + + + G+ +LH I H DL SN++
Sbjct: 92 MCHNGEMNRYLKNRVKPFSENEARHF--MHQIITGMLYLHSHG---ILHRDLTLSNLLLT 146
Query: 577 ENMEPHLAEFGF 588
NM +A+FG
Sbjct: 147 RNMNIKIADFGL 158
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 7e-09
Identities = 46/204 (22%), Positives = 89/204 (43%), Gaps = 34/204 (16%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQA--YLLYDYL 523
TG V+VKK++ + + +F I +++H N+++ G CY+ + L+ +YL
Sbjct: 38 TGEVVAVKKLQHSTE--EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95
Query: 524 PNGNLSEKIRTKRDWAAKYKIVL---GVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580
P G+L + ++ ++ K++ + +G+ +L Y I H DL NI+ +
Sbjct: 96 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY--I-HRDLATRNILVENENR 152
Query: 581 PHLAEFGF--------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFG 627
+ +FG ++ G P I W ES +F A DV+ FG
Sbjct: 153 VKIGDFGLTKVLPQDKEFFKVKEPGESP--IFWYAPESLTESKFSVA------SDVWSFG 204
Query: 628 EIILEILTNGRLTNAGSSLQNKPI 651
++ E+ T + + + + I
Sbjct: 205 VVLYELFTYIEKSKSPPAEFMRMI 228
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 8e-09
Identities = 39/194 (20%), Positives = 81/194 (41%), Gaps = 33/194 (17%)
Query: 463 CKAVLPTGITVSVKKIEWGATRIKIVSEFIT--RI-GTVRHKNLIRLLGFCYNRHQAYLL 519
V++K I+ G+ EFI ++ + H+ L++L G C + +++
Sbjct: 41 KYGKWRGQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97
Query: 520 YDYLPNGNLSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFD 576
+Y+ NG L +R R +++ V + +L + + H DL A N + +
Sbjct: 98 TEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF--L-HRDLAARNCLVN 154
Query: 577 ENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVY 624
+ +++FG +Y + FP + W+ E +F + D++
Sbjct: 155 DQGVVKVSDFGLSRYVLDDEYTSS-VGSKFPVR--WSPPEVLMYSKFSSK------SDIW 205
Query: 625 GFGEIILEILTNGR 638
FG ++ EI + G+
Sbjct: 206 AFGVLMWEIYSLGK 219
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 8e-09
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 49/240 (20%)
Query: 164 SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV 223
SVP+ I + L+L + + + F L +L+L N L + A
Sbjct: 28 SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ-TLSA-------- 76
Query: 224 THMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKEL-SNLTKLESLFLFRNQLA 282
+ L + L +A L+ S+P + +LT+L+ L+L NQL
Sbjct: 77 ------------GVFDDLTEL---GTLGLANNQLA-SLPLGVFDHLTQLDKLYLGGNQLK 120
Query: 283 GQVPWEFSRVTTLKSLDLSDNRLSGPIPES-FADLKNLRLLSLMYNEMSGTVPESLVQLP 341
F R+T LK L L+ N+L IP F L NL+ LSL N++ + +L
Sbjct: 121 SLPSGVFDRLTKLKELRLNTNQLQS-IPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLG 179
Query: 342 SLEILFIWNN----------YFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDI--CSGG 389
L+ + ++ N Y S + EN K++ + + PD CS G
Sbjct: 180 KLQTITLFGNQFDCSRCEILYLSQWIRENSN---KVKDGTGQNLHES----PDGVTCSDG 232
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 6e-05
Identities = 42/153 (27%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNL 319
S+P + T E L L LA F +T L L+L N+L F DL L
Sbjct: 28 SVPSGIPADT--EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTEL 85
Query: 320 RLLSLMYNEMSGTVPESLV-QLPSLEILFIWNNYFSGSLPENLGRN-SKLRWVDVSTNNF 377
L L N+++ ++P + L L+ L++ N SLP + +KL+ + ++TN
Sbjct: 86 GTLGLANNQLA-SLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQL 143
Query: 378 NGSIPPDICSGGV------LFKLILFSNNFTGI 404
SIP G L L L +N +
Sbjct: 144 Q-SIPA-----GAFDKLTNLQTLSLSTNQLQSV 170
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 56.0 bits (136), Expect = 8e-09
Identities = 42/194 (21%), Positives = 80/194 (41%), Gaps = 33/194 (17%)
Query: 463 CKAVLPTGITVSVKKIEWGATRIKIVSEFIT--RI-GTVRHKNLIRLLGFCYNRHQAYLL 519
V+VK I+ G+ EF + + H L++ G C + Y++
Sbjct: 25 KLGKWKGQYDVAVKMIKEGSMS---EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIV 81
Query: 520 YDYLPNGNLSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFD 576
+Y+ NG L +R+ +++ V G+ FL + I H DL A N + D
Sbjct: 82 TEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQF--I-HRDLAARNCLVD 138
Query: 577 ENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVY 624
++ +++FG +Y++ FP K W+ E ++ + DV+
Sbjct: 139 RDLCVKVSDFGMTRYVLDDQYVSS-VGTKFPVK--WSAPEVFHYFKYSSK------SDVW 189
Query: 625 GFGEIILEILTNGR 638
FG ++ E+ + G+
Sbjct: 190 AFGILMWEVFSLGK 203
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 9e-09
Identities = 39/197 (19%), Positives = 79/197 (40%), Gaps = 33/197 (16%)
Query: 463 CKAVLPTG---ITVSVKKIEWGATRIKIVSEFIT--RI-GTVRHKNLIRLLGFCYNRHQA 516
K TV+VK ++ A + E + + + + ++R++G C
Sbjct: 34 KKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW 92
Query: 517 YLLYDYLPNGNLSEKIRTKRDWAAK--YKIVLGVARGLCFLHHDCYPAIPHGDLKASNIV 574
L+ + G L++ ++ R K ++V V+ G+ +L + + H DL A N++
Sbjct: 93 MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF--V-HRDLAARNVL 149
Query: 575 FDENMEPHLAEFGF-KYLTQLAD-------GSFPAKIAWT--ES---GEFYNAMKEEMYM 621
+++FG K L + G +P + W E +F +
Sbjct: 150 LVTQHYAKISDFGLSKALRADENYYKAQTHGKWP--VKWYAPECINYYKFSSK------S 201
Query: 622 DVYGFGEIILEILTNGR 638
DV+ FG ++ E + G+
Sbjct: 202 DVWSFGVLMWEAFSYGQ 218
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 1e-08
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 35/195 (17%)
Query: 463 CKAVLPTGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLL 519
V+VK ++ G+ F+ ++H+ L+RL + Y++
Sbjct: 30 WMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYII 85
Query: 520 YDYLPNGNLSEKIRTKRDWAAKYK----IVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 575
+Y+ NG+L + ++T + +A G+ F+ Y I H DL+A+NI+
Sbjct: 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY--I-HRDLRAANILV 142
Query: 576 DENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDV 623
+ + +A+FG +Y T FP K WT E+ G F DV
Sbjct: 143 SDTLSCKIADFGLARLIEDNEY-TAREGAKFPIK--WTAPEAINYGTFTIK------SDV 193
Query: 624 YGFGEIILEILTNGR 638
+ FG ++ EI+T+GR
Sbjct: 194 WSFGILLTEIVTHGR 208
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 1e-08
Identities = 57/267 (21%), Positives = 101/267 (37%), Gaps = 72/267 (26%)
Query: 467 LPTGITVSVKKIEWGATRIKIVSEFITRIG-------TVRHKNLIRLLGFCYNRHQAYLL 519
+ TG V++K I+ + ++ + ++ + H N+++L YL+
Sbjct: 37 ILTGREVAIKIID----KTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92
Query: 520 YDYLPNGNLSEKI----RTKRDWAAKY--KIVLGVARGLCFLHHDCYPAIPHGDLKASNI 573
+Y G + + + R K A +IV V + H I H DLKA N+
Sbjct: 93 MEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ----YCHQKR---IVHRDLKAENL 145
Query: 574 VFDENMEPHLAEFGFKYLTQLADGSF------------PAKIAWTESGEFYNAMKEEMYM 621
+ D +M +A+FGF + G P G+ Y+ + +
Sbjct: 146 LLDADMNIKIADFGFS--NEFTVGGKLDAFCGAPPYAAPELF----QGKKYDGPE----V 195
Query: 622 DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGL-LGEMYNENEVGS-------SSSLQDE 673
DV+ G +IL L +G L P DG L E+ G S+ ++
Sbjct: 196 DVWSLG-VILYTLVSGSL----------PFDGQNLKELRERVLRGKYRIPFYMSTDCENL 244
Query: 674 IKLVLDVALLCTRSTPSDRPSMEEALK 700
+K L + P R ++E+ +K
Sbjct: 245 LKRFLVL-------NPIKRGTLEQIMK 264
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 1e-08
Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 50/212 (23%)
Query: 463 CKAVL---PTGITVSVKKIEWGAT---RIKIVSEF--ITRIGTVRHKNLIRLLGFCYNRH 514
KA + + ++K+++ A+ E + ++G H N+I LLG C +R
Sbjct: 42 LKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG--HHPNIINLLGACEHRG 99
Query: 515 QAYLLYDYLPNGNLSEKIRTKRDWAAKY------------------KIVLGVARGLCFLH 556
YL +Y P+GNL + +R R VARG+ +L
Sbjct: 100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS 159
Query: 557 HDCYPAIPHGDLKASNIVFDENMEPHLAEFGF----KYLTQLADGSFPAKIAWT--ESGE 610
+ I H DL A NI+ EN +A+FG + + G P + W ES
Sbjct: 160 QKQF--I-HRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR--WMAIES-- 212
Query: 611 FYNAMKEEMYM---DVYGFGEIIL-EILTNGR 638
+ +Y DV+ +G ++L EI++ G
Sbjct: 213 ----LNYSVYTTNSDVWSYG-VLLWEIVSLGG 239
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 2e-08
Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 34/204 (16%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQA--YLLYDYL 523
TG V+VKK++ + + +F I +++H N+++ G CY+ + L+ +YL
Sbjct: 69 TGEVVAVKKLQHSTE--EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 126
Query: 524 PNGNLSEKIRTKRDWAAKYKIVL---GVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580
P G+L + ++ ++ K++ + +G+ +L Y I H DL NI+ +
Sbjct: 127 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY--I-HRDLATRNILVENENR 183
Query: 581 PHLAEFGF--------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFG 627
+ +FG +Y G P I W ES +F A DV+ FG
Sbjct: 184 VKIGDFGLTKVLPQDKEYYKVKEPGESP--IFWYAPESLTESKFSVA------SDVWSFG 235
Query: 628 EIILEILTNGRLTNAGSSLQNKPI 651
++ E+ T + + + + I
Sbjct: 236 VVLYELFTYIEKSKSPPAEFMRMI 259
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 55.8 bits (134), Expect = 2e-08
Identities = 24/185 (12%), Positives = 50/185 (27%), Gaps = 28/185 (15%)
Query: 473 VSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKI 532
V W I ++ + R+ ++ ++ + L+ + G L I
Sbjct: 102 VQKPANPW---EFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAI 158
Query: 533 RTKRDWAAKY-------KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 585
++ K + + + +H I HGD+K N + E
Sbjct: 159 NLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDE 215
Query: 586 FGFKYLTQLAD-GSFPAKIAWTESGEFYNAMKEEMYM--------------DVYGFGEII 630
L D G + + F + + D +G +
Sbjct: 216 DDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATV 275
Query: 631 LEILT 635
+L
Sbjct: 276 YCMLF 280
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 56.1 bits (135), Expect = 3e-08
Identities = 38/198 (19%), Positives = 81/198 (40%), Gaps = 35/198 (17%)
Query: 463 CKAVLPTG---ITVSVKKIEWGATRIKIVSEFIT--RI-GTVRHKNLIRLLGFCYNRHQA 516
+ V I V++K ++ G + E + +I + + ++RL+G C
Sbjct: 353 RQGVYRMRKKQIDVAIKVLKQGTEK-ADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEAL 410
Query: 517 YLLYDYLPNGNLSEKIRTKRD---WAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNI 573
L+ + G L + + KR+ + +++ V+ G+ +L + + H +L A N+
Sbjct: 411 MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF--V-HRNLAARNV 467
Query: 574 VFDENMEPHLAEFGF--------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMY 620
+ +++FG Y T + G +P + W E +F +
Sbjct: 468 LLVNRHYAKISDFGLSKALGADDSYYTARSAGKWP--LKWYAPECINFRKFSSR------ 519
Query: 621 MDVYGFGEIILEILTNGR 638
DV+ +G + E L+ G+
Sbjct: 520 SDVWSYGVTMWEALSYGQ 537
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 3e-08
Identities = 44/272 (16%), Positives = 89/272 (32%), Gaps = 58/272 (21%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGF-------------CYNRHQ 515
++KKI ++ + + + ++ H+ ++R +
Sbjct: 30 DSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKST 89
Query: 516 AYLLYDYLPNGNLSEKIRTK-----RDWAAKY--KIVLGVARGLCFLHHDCYPAIPHGDL 568
++ +Y NG L + I ++ RD + +I+ ++ ++H I H DL
Sbjct: 90 LFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALS----YIHSQ---GIIHRDL 142
Query: 569 KASNIVFDENMEPHLAEFGF-KYLTQLADGSFPAKIAWTESGEFYNAMK-EEMYM----- 621
K NI DE+ + +FG K + + D S + + MY+
Sbjct: 143 KPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVL 202
Query: 622 ----------DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYN---ENEVGSSS 668
D+Y G II + T + + L + +
Sbjct: 203 DGTGHYNEKIDMYSLG-IIFFEMIYPFSTG---MERVNILKKLRSVSIEFPPDFDDNKMK 258
Query: 669 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700
+ I+L++D P+ RP L
Sbjct: 259 VEKKIIRLLIDH-------DPNKRPGARTLLN 283
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 3e-08
Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 6/110 (5%)
Query: 241 LGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDL 300
E+++L L+ SI L L KL+ L L N+++G + + L L+L
Sbjct: 38 TDEFEELEFLSTINVGLT-SI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95
Query: 301 SDNRLSGP-IPESFADLKNLRLLSLMYN---EMSGTVPESLVQLPSLEIL 346
S N++ E L+NL+ L L ++ LP L L
Sbjct: 96 SGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYL 145
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 4e-05
Identities = 22/111 (19%), Positives = 43/111 (38%), Gaps = 4/111 (3%)
Query: 267 NLTKLESLFLFRNQL-AGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLM 325
+ ++ L L ++ G++ L+ L + L+ + L L+ L L
Sbjct: 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT--SIANLPKLNKLKKLELS 72
Query: 326 YNEMSGTVPESLVQLPSLEILFIWNNYFSG-SLPENLGRNSKLRWVDVSTN 375
N +SG + + P+L L + N S E L + L+ +D+
Sbjct: 73 DNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNC 123
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 5e-08
Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 6/110 (5%)
Query: 241 LGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDL 300
+++L + L S+ L L KL+ L L N++ G + ++ L L+L
Sbjct: 45 TAEFVNLEFLSLINVGLI-SVSN-LPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102
Query: 301 SDNRLSGP-IPESFADLKNLRLLSLMYN---EMSGTVPESLVQLPSLEIL 346
S N+L E L+ L+ L L ++ LP L L
Sbjct: 103 SGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYL 152
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 1e-04
Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 6/112 (5%)
Query: 267 NLTKLESLFLFRNQLA-GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLM 325
+ L L + G++ + L+ L L + L + L L+ L L
Sbjct: 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLI--SVSNLPKLPKLKKLELS 79
Query: 326 YNEMSGTVPESLVQLPSLEILFIWNNYFS--GSLPENLGRNSKLRWVDVSTN 375
N + G + +LP+L L + N +L E L + L+ +D+
Sbjct: 80 ENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTL-EPLKKLECLKSLDLFNC 130
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 2e-04
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Query: 294 TLKSLDLSDNRLS-GPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNY 352
++ L L + + + G I A+ NL LSL+ + +L +LP L+ L + N
Sbjct: 25 AVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENR 82
Query: 353 FSGSLPENLGRNSKLRWVDVSTNNFN 378
G L + L +++S N
Sbjct: 83 IFGGLDMLAEKLPNLTHLNLSGNKLK 108
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 5e-04
Identities = 34/183 (18%), Positives = 63/183 (34%), Gaps = 30/183 (16%)
Query: 125 TSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY 184
+ +D+ R ++R L VLD ++ G + ++ +L+ L+L
Sbjct: 3 SGSSGMDMKRRIHLELRNRTPAAVREL-VLDNCKSN-DGKIEGLTAEFVNLEFLSLINVG 60
Query: 185 FSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNM 244
S L+ L L+ N + + L +TH+ + N +L ++
Sbjct: 61 LI--SVSNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGN--------KLKDI 110
Query: 245 SEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQV---PWEFSRVTTLKSLDLS 301
S ++ L L L+SL LF ++ F + L LD
Sbjct: 111 STLEP---------------LKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGY 155
Query: 302 DNR 304
D
Sbjct: 156 DRE 158
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 5e-08
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 31/187 (16%)
Query: 471 ITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527
+ V++K ++ G T + +F++ G H N+IRL G A ++ +Y+ NG+
Sbjct: 78 VPVAIKALKAGYTE-RQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGS 136
Query: 528 LSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 584
L +RT ++V GV G+ +L Y + H DL A N++ D N+ ++
Sbjct: 137 LDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY--V-HRDLAARNVLVDSNLVCKVS 193
Query: 585 EFGF-KYLTQLAD-------GSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGEIIL 631
+FG + L D G P + WT E+ F +A DV+ FG ++
Sbjct: 194 DFGLSRVLEDDPDAAYTTTGGKIPIR--WTAPEAIAFRTFSSA------SDVWSFGVVMW 245
Query: 632 EILTNGR 638
E+L G
Sbjct: 246 EVLAYGE 252
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 5e-08
Identities = 59/276 (21%), Positives = 102/276 (36%), Gaps = 73/276 (26%)
Query: 471 ITVSVKKIEWGATRIKIVSEFIT---RIGTVRHKNLIRLLGFC-----YNRHQAYLLYDY 522
+ V+VK ++ + + + EF++ + H N+IRLLG C + ++ +
Sbjct: 63 LKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPF 122
Query: 523 LPNGNLSEKIRTKRDWAAKY--------KIVLGVARGLCFLHHDCYPAIPHGDLKASNIV 574
+ G+L + R K ++ +A G+ +L + + + H DL A N +
Sbjct: 123 MKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNF--L-HRDLAARNCM 179
Query: 575 FDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMD 622
++M +A+FG Y Q P K W ES + + D
Sbjct: 180 LRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK--WIAIESLADRVYTSK------SD 231
Query: 623 VYGFGEIILEILTNGR-----LTNA--------GSSLQNKPIDGLLGEMYNENEVGSSSS 669
V+ FG + EI T G + N G L+ +P + L E+Y
Sbjct: 232 VWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLK-QP-EDCLDELYE--------- 280
Query: 670 LQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705
+ C R+ P DRP+ L L
Sbjct: 281 ----------IMYSCWRTDPLDRPTFSVLRLQLEKL 306
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 7e-08
Identities = 67/282 (23%), Positives = 108/282 (38%), Gaps = 80/282 (28%)
Query: 471 ITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527
+TV+VK ++ AT +VSE +HKN+I LLG C Y++ +Y GN
Sbjct: 68 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 127
Query: 528 LSEKIRTKRDWAAKY------------------KIVLGVARGLCFLHHDCYPAIPHGDLK 569
L E +R +R +Y +ARG+ +L I H DL
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC--I-HRDLA 184
Query: 570 ASNIVFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ESGEFYNAMKEEMY 620
A N++ EN +A+FG Y + +G P K W E+ + + +Y
Sbjct: 185 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK--WMAPEA------LFDRVY 236
Query: 621 M---DVYGFGEIIL-EILTNGR-----LTNA--------GSSLQNKPIDGLLGEMYNENE 663
DV+ FG +++ EI T G + G + KP E+Y
Sbjct: 237 THQSDVWSFG-VLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD-KP-ANCTNELYM--- 290
Query: 664 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705
+ C + PS RP+ ++ ++ L +
Sbjct: 291 ----------------MMRDCWHAVPSQRPTFKQLVEDLDRI 316
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 7e-08
Identities = 39/198 (19%), Positives = 78/198 (39%), Gaps = 35/198 (17%)
Query: 463 CKAVLPTG---ITVSVKKIEWGATRIKIVSEFIT--RI-GTVRHKNLIRLLGFCYNRHQA 516
+ V I V++K ++ G + E + +I + + ++RL+G C
Sbjct: 27 RQGVYRMRKKQIDVAIKVLKQGTEK-ADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEAL 84
Query: 517 YLLYDYLPNGNLSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNI 573
L+ + G L + + KR+ + V+ G+ +L + + H DL A N+
Sbjct: 85 MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF--V-HRDLAARNV 141
Query: 574 VFDENMEPHLAEFGF--------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMY 620
+ +++FG Y T + G +P + W E +F +
Sbjct: 142 LLVNRHYAKISDFGLSKALGADDSYYTARSAGKWP--LKWYAPECINFRKFSSR------ 193
Query: 621 MDVYGFGEIILEILTNGR 638
DV+ +G + E L+ G+
Sbjct: 194 SDVWSYGVTMWEALSYGQ 211
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 7e-08
Identities = 69/284 (24%), Positives = 111/284 (39%), Gaps = 84/284 (29%)
Query: 471 ITVSVKKIEWGAT---RIKIVSEF--ITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525
+TV+VK ++ AT +VSE + IG +HKN+I LLG C Y++ +Y
Sbjct: 114 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASK 171
Query: 526 GNLSEKIRTKRDWAAKY------------------KIVLGVARGLCFLHHDCYPAIPHGD 567
GNL E +R +R +Y +ARG+ +L I H D
Sbjct: 172 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC--I-HRD 228
Query: 568 LKASNIVFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ESGEFYNAMKEE 618
L A N++ EN +A+FG Y + +G P K W E+ + +
Sbjct: 229 LAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK--WMAPEA------LFDR 280
Query: 619 MYM---DVYGFGEIIL-EILTNGR-----LTNA--------GSSLQNKPIDGLLGEMYNE 661
+Y DV+ FG +++ EI T G + G + KP E+Y
Sbjct: 281 VYTHQSDVWSFG-VLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD-KP-ANCTNELYM- 336
Query: 662 NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705
+ C + PS RP+ ++ ++ L +
Sbjct: 337 ------------------MMRDCWHAVPSQRPTFKQLVEDLDRI 362
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 8e-08
Identities = 54/277 (19%), Positives = 97/277 (35%), Gaps = 74/277 (26%)
Query: 471 ITVSVKKIEWGATRIKIVSEFIT---RIGTVRHKNLIRLLGFC------YNRHQAYLLYD 521
+ V+VK ++ + EF+ + H ++ +L+G ++
Sbjct: 52 VKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILP 111
Query: 522 YLPNGNLSEKIRTKRDWAAKYKIVLG--------VARGLCFLHHDCYPAIPHGDLKASNI 573
++ +G+L + R + + L +A G+ +L + I H DL A N
Sbjct: 112 FMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNF--I-HRDLAARNC 168
Query: 574 VFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYM 621
+ E+M +A+FG Y Q P K W ES +
Sbjct: 169 MLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVK--WLALESLADNLYTVH------S 220
Query: 622 DVYGFGEIILEILTNGR-----LTNA--------GSSLQNKPIDGLLGEMYNENEVGSSS 668
DV+ FG + EI+T G+ + NA G+ L+ +P + E+Y+
Sbjct: 221 DVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLK-QP-PECMEEVYD-------- 270
Query: 669 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705
+ C + P RPS L +
Sbjct: 271 -----------LMYQCWSADPKQRPSFTCLRMELENI 296
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 8e-08
Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 12/101 (11%)
Query: 498 VRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKR--DWAAKYKIVLGVAR----- 550
++++ + G N + Y++Y+Y+ N ++ + D I + V +
Sbjct: 100 IKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKS 159
Query: 551 ---GLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 588
++H+ I H D+K SNI+ D+N L++FG
Sbjct: 160 VLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGE 198
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 1e-07
Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 35/199 (17%)
Query: 463 CKAVLPTG----ITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQ 515
C L I+V++K ++ G T K +F+ G H N+IRL G
Sbjct: 62 CSGRLKLPSKKEISVAIKTLKVGYTE-KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120
Query: 516 AYLLYDYLPNGNLSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASN 572
++ +Y+ NG+L +R ++V G+A G+ +L Y + H DL A N
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY--V-HRDLAARN 177
Query: 573 IVFDENMEPHLAEFGF-------KYLTQLADGS-FPAKIAWT--ES---GEFYNAMKEEM 619
I+ + N+ +++FG G P + WT E+ +F +A
Sbjct: 178 ILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIR--WTSPEAIAYRKFTSA----- 230
Query: 620 YMDVYGFGEIILEILTNGR 638
DV+ +G ++ E+++ G
Sbjct: 231 -SDVWSYGIVLWEVMSYGE 248
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 1e-07
Identities = 67/281 (23%), Positives = 108/281 (38%), Gaps = 84/281 (29%)
Query: 471 ITVSVKKIEWGAT---RIKIVSEF--ITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525
V+VK ++ AT ++SE + IG +HKN+I LLG C Y++ +Y
Sbjct: 102 TKVAVKMLKSDATEKDLSDLISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASK 159
Query: 526 GNLSEKIRTKRDWAAKYKIVLG------------------VARGLCFLHHDCYPAIPHGD 567
GNL E ++ +R +Y VARG+ +L I H D
Sbjct: 160 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC--I-HRD 216
Query: 568 LKASNIVFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ESGEFYNAMKEE 618
L A N++ E+ +A+FG Y + +G P K W E+ + +
Sbjct: 217 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK--WMAPEA------LFDR 268
Query: 619 MYM---DVYGFGEIIL-EILTNGR-----LTNA--------GSSLQNKPIDGLLGEMYNE 661
+Y DV+ FG ++L EI T G + G + KP E+Y
Sbjct: 269 IYTHQSDVWSFG-VLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD-KP-SNCTNELYM- 324
Query: 662 NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLL 702
+ C + PS RP+ ++ ++ L
Sbjct: 325 ------------------MMRDCWHAVPSQRPTFKQLVEDL 347
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 1e-07
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 267 NLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPE-SFADLKNLRLLSLM 325
L L L L RNQL G P F + ++ L L +N++ I F L L+ L+L
Sbjct: 52 RLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKE-ISNKMFLGLHQLKTLNLY 110
Query: 326 YNEMSGTVPE-SLVQLPSLEILFIWNN 351
N++S V S L SL L + +N
Sbjct: 111 DNQIS-CVMPGSFEHLNSLTSLNLASN 136
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 53.7 bits (129), Expect = 1e-07
Identities = 38/185 (20%), Positives = 79/185 (42%), Gaps = 30/185 (16%)
Query: 471 ITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527
+ V++K + + R K + E +T + H ++++L+G + +++ + G
Sbjct: 419 MAVAIKTCKNCTSDSVREKFLQEALT-MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGE 476
Query: 528 LSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 584
L ++ ++ ++ ++ L +L + + H D+ A N++ N L
Sbjct: 477 LRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF--V-HRDIAARNVLVSSNDCVKLG 533
Query: 585 EFGF-KYL-----TQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGEIILEI 633
+FG +Y+ + + G P K W ES F +A DV+ FG + EI
Sbjct: 534 DFGLSRYMEDSTYYKASKGKLPIK--WMAPESINFRRFTSA------SDVWMFGVCMWEI 585
Query: 634 LTNGR 638
L +G
Sbjct: 586 LMHGV 590
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 2e-07
Identities = 44/202 (21%), Positives = 79/202 (39%), Gaps = 48/202 (23%)
Query: 471 ITVSVKKIEWGAT---RIKIVSEF--ITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525
+ V+VK ++ A + ++SE ++ +G +H+N++ LLG C + ++ +Y
Sbjct: 77 LKVAVKMLKSTAHADEKEALMSELKIMSHLG--QHENIVNLLGACTHGGPVLVITEYCCY 134
Query: 526 GNLSEKIRTKRDWAAKY----------------KIVLGVARGLCFLHHDCYPAIPHGDLK 569
G+L +R K VA+G+ FL I H D+
Sbjct: 135 GDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNC--I-HRDVA 191
Query: 570 ASNIVFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ESGEFYNAMKEEMY 620
A N++ + +FG + P K W ES + + +Y
Sbjct: 192 ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK--WMAPES------IFDCVY 243
Query: 621 M---DVYGFGEIIL-EILTNGR 638
DV+ +G I+L EI + G
Sbjct: 244 TVQSDVWSYG-ILLWEIFSLGL 264
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 2e-07
Identities = 50/206 (24%), Positives = 78/206 (37%), Gaps = 52/206 (25%)
Query: 471 ITVSVKKIEWGAT---RIKIVSEF--ITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525
+TV+VK ++ A R ++SE ++ +G H N++ LLG C ++ +Y
Sbjct: 54 MTVAVKMLKPSAHLTEREALMSELKVLSYLG--NHMNIVNLLGACTIGGPTLVITEYCCY 111
Query: 526 GNLSEKIRTKRDWAAKYKIVLG--------------------VARGLCFLHHDCYPAIPH 565
G+L +R KRD K VA+G+ FL I H
Sbjct: 112 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC--I-H 168
Query: 566 GDLKASNIVFDENMEPHLAEFGFKYLTQLAD-------GSFPAKIAWT--ESGEFYNAMK 616
DL A NI+ + +FG + P K W ES +
Sbjct: 169 RDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK--WMAPES------IF 220
Query: 617 EEMYM---DVYGFGEIIL-EILTNGR 638
+Y DV+ +G I L E+ + G
Sbjct: 221 NCVYTFESDVWSYG-IFLWELFSLGS 245
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 45/194 (23%), Positives = 79/194 (40%), Gaps = 44/194 (22%)
Query: 471 ITVSVKKIEWGAT-RIKIVSEFIT--RI-GTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526
++V+VK ++ + + + +FI ++ H+NLIRL G ++ + P G
Sbjct: 47 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLG 105
Query: 527 NLSEKIRTKR---------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 577
+L +++R + +A VA G+ +L + I H DL A N++
Sbjct: 106 SLLDRLRKHQGHFLLGTLSRYAV------QVAEGMGYLESKRF--I-HRDLAARNLLLAT 156
Query: 578 NMEPHLAEFGF-KYLTQLAD-------GSFPAKIAWT--ES---GEFYNAMKEEMYMDVY 624
+ +FG + L Q D P AW ES F +A D +
Sbjct: 157 RDLVKIGDFGLMRALPQNDDHYVMQEHRKVP--FAWCAPESLKTRTFSHA------SDTW 208
Query: 625 GFGEIILEILTNGR 638
FG + E+ T G+
Sbjct: 209 MFGVTLWEMFTYGQ 222
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 52.3 bits (125), Expect = 2e-07
Identities = 32/221 (14%), Positives = 59/221 (26%), Gaps = 38/221 (17%)
Query: 500 HKNLIRLLG-FCYNRHQAYLLYDYLPNGNLSEKI---------RTKRDWAAKYKIVLGVA 549
K +IR+ + NL A+ ++ L V
Sbjct: 157 KKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVI 216
Query: 550 RGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY---LTQLADGSFPAKIA-- 604
R L LHH + H L+ +IV D+ L F ++ S
Sbjct: 217 RLLASLHHYG---LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPE 272
Query: 605 --WTESGEFYNAMKEEMY---MDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMY 659
+ Y+ + + D + G +I I L + E
Sbjct: 273 LEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWC-ADLPITKDAALG------GSEWI 325
Query: 660 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700
+ ++ ++ L DR +A++
Sbjct: 326 FRSCKNIPQPVRALLEGFLRY-------PKEDRLLPLQAME 359
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 3e-07
Identities = 48/275 (17%), Positives = 91/275 (33%), Gaps = 73/275 (26%)
Query: 468 PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524
P+ + V+VK + + + + E I H+N++R +G ++L + +
Sbjct: 58 PSPLQVAVKTLPEVCSEQDELDFLME-ALIISKFNHQNIVRCIGVSLQSLPRFILMELMA 116
Query: 525 NGNLSEKIRTKRDWAAKY---------KIVLGVARGLCFLHHDCYPAIPHGDLKASNI-- 573
G+L +R R ++ + +A G +L + + I H D+ A N
Sbjct: 117 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF--I-HRDIAARNCLL 173
Query: 574 -VFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ESGEFYNAMKEEMYM-- 621
+ +FG Y + P K W E+ E ++
Sbjct: 174 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK--WMPPEA------FMEGIFTSK 225
Query: 622 -DVYGFGEIILEILTNGR-----LTNA--------GSSLQNKPIDGLLGEMYNENEVGSS 667
D + FG ++ EI + G +N G + P G +Y
Sbjct: 226 TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD-PP-KNCPGPVYR------- 276
Query: 668 SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLL 702
+ C + P DRP+ L+ +
Sbjct: 277 ------------IMTQCWQHQPEDRPNFAIILERI 299
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 3e-07
Identities = 38/272 (13%), Positives = 79/272 (29%), Gaps = 61/272 (22%)
Query: 469 TGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA--------- 516
++K+I R K++ E + + + H ++R ++
Sbjct: 29 DDCNYAIKRIRLPNRELAREKVMRE-VKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPK 87
Query: 517 ---YLLYDYLPNGNLSEKIRTKR-----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDL 568
Y+ NL + + + + + I L +A + FLH + H DL
Sbjct: 88 VYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDL 144
Query: 569 KASNIVFDENMEPHLAEFGF-KYLTQLADGSFPAKIAWTESGEFYNAMKEEM-----YM- 621
K SNI F + + +FG + Q + + A YM
Sbjct: 145 KPSNIFFTMDDVVKVGDFGLVTAMDQDEE------EQTVLTPMPAYARHTGQVGTKLYMS 198
Query: 622 -------------DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 668
D++ G I+ E+L + ++ +
Sbjct: 199 PEQIHGNSYSHKVDIFSLGLILFELLYPFSTQMERVRTLTDVRNLKFPPLFTQ----KYP 254
Query: 669 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700
++ +P +RP ++
Sbjct: 255 CEYVMVQ-------DMLSPSPMERPEAINIIE 279
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 3e-07
Identities = 54/273 (19%), Positives = 101/273 (36%), Gaps = 73/273 (26%)
Query: 471 ITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527
V++K + A+ RI+ ++E + +++RLLG ++ + + G+
Sbjct: 56 TRVAIKTVNEAASMRERIEFLNEASV-MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGD 114
Query: 528 LSEKIRTKRDWAAKY------------KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 575
L +R+ R A ++ +A G+ +L+ + + + H DL A N +
Sbjct: 115 LKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--V-HRDLAARNCMV 171
Query: 576 DENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ESGEFYNAMKEEMYM---DV 623
E+ + +FG Y + G P + W ES +K+ ++ DV
Sbjct: 172 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR--WMSPES------LKDGVFTTYSDV 223
Query: 624 YGFGEIILEILTNGR-----LTN--------AGSSLQNKPIDGLLGEMYNENEVGSSSSL 670
+ FG ++ EI T L+N G L KP D ++
Sbjct: 224 WSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD-KP-DNCPDMLFE---------- 271
Query: 671 QDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 703
L+ C + P RPS E + +
Sbjct: 272 -----LMRM----CWQYNPKMRPSFLEIISSIK 295
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 3e-07
Identities = 48/275 (17%), Positives = 93/275 (33%), Gaps = 73/275 (26%)
Query: 468 PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524
P+ + V+VK + + + + E + I H+N++R +G ++L + +
Sbjct: 99 PSPLQVAVKTLPEVCSEQDELDFLMEALI-ISKFNHQNIVRCIGVSLQSLPRFILLELMA 157
Query: 525 NGNLSEKIRTKRDWAAKY---------KIVLGVARGLCFLHHDCYPAIPHGDLKASNI-- 573
G+L +R R ++ + +A G +L + + I H D+ A N
Sbjct: 158 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF--I-HRDIAARNCLL 214
Query: 574 -VFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ESGEFYNAMKEEMYM-- 621
+ +FG Y + P K W E+ E ++
Sbjct: 215 TCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK--WMPPEA------FMEGIFTSK 266
Query: 622 -DVYGFGEIILEILTNGR-----LTN--------AGSSLQNKPIDGLLGEMYNENEVGSS 667
D + FG ++ EI + G +N +G + P G +Y
Sbjct: 267 TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD-PP-KNCPGPVYR------- 317
Query: 668 SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLL 702
+ C + P DRP+ L+ +
Sbjct: 318 ------------IMTQCWQHQPEDRPNFAIILERI 340
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 4e-07
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 31/187 (16%)
Query: 471 ITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527
+ V++K ++ G T K +F+ G H N+IRL G ++ +Y+ NG
Sbjct: 74 VPVAIKTLKAGYTE-KQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGA 132
Query: 528 LSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 584
L + +R K + ++V G+A G+ +L + Y + H DL A NI+ + N+ ++
Sbjct: 133 LDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY--V-HRDLAARNILVNSNLVCKVS 189
Query: 585 EFGF-------KYLTQLADGS-FPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGEIIL 631
+FG T G P + WT E+ +F +A DV+ FG ++
Sbjct: 190 DFGLSRVLEDDPEATYTTSGGKIPIR--WTAPEAISYRKFTSA------SDVWSFGIVMW 241
Query: 632 EILTNGR 638
E++T G
Sbjct: 242 EVMTYGE 248
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 4e-07
Identities = 30/148 (20%), Positives = 51/148 (34%), Gaps = 43/148 (29%)
Query: 467 LPTGITVSVKKIEWGATRIKIVSEFITRIGT-------------VRHKNLIRLLGFCYNR 513
V VK I+ + K++ + V H N+I++L N+
Sbjct: 46 KEKNKEVVVKFIK----KEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101
Query: 514 HQAYL----------LYDYL-PNGNLSEKIRTKRDWAAKY--KIVLGVARGLCFLHHDCY 560
L L+ ++ + L E + A+ ++V V +L
Sbjct: 102 GFFQLVMEKHGSGLDLFAFIDRHPRLDEPL------ASYIFRQLVSAVG----YLRLKD- 150
Query: 561 PAIPHGDLKASNIVFDENMEPHLAEFGF 588
I H D+K NIV E+ L +FG
Sbjct: 151 --IIHRDIKDENIVIAEDFTIKLIDFGS 176
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 5e-07
Identities = 17/86 (19%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 265 LSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGP-IPESFADLKNLRLLS 323
L +L++L + N++ + L L L++N L + A LK+L L
Sbjct: 60 FPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLC 119
Query: 324 LMYN---EMSGTVPESLVQLPSLEIL 346
++ N + ++P + +L
Sbjct: 120 ILRNPVTNKKHYRLYVIYKVPQVRVL 145
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 8e-07
Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 6/114 (5%)
Query: 264 ELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLS 323
+ +N + L L ++ + + + ++D SDN + + + F L+ L+ L
Sbjct: 14 QYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KL-DGFPLLRRLKTLL 70
Query: 324 LMYNEMSGTVPESLVQLPSLEILFIWNNYFS--GSLPENLGRNSKLRWVDVSTN 375
+ N + LP L L + NN G L + L L ++ + N
Sbjct: 71 VNNNRICRIGEGLDQALPDLTELILTNNSLVELGDL-DPLASLKSLTYLCILRN 123
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 6e-07
Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 33/189 (17%)
Query: 471 ITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRH-QAYLLYDYLPNG 526
I ++K + + E + + + H N++ L+G ++L Y+ +G
Sbjct: 50 IQCAIKSLSRITEMQQVEAFLREGLL-MRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHG 108
Query: 527 NLSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 583
+L + IR+ + ++ L VARG+ +L + + H DL A N + DE+ +
Sbjct: 109 DLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKF--V-HRDLAARNCMLDESFTVKV 165
Query: 584 AEFGFK--------YLTQLADGS-FPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGEI 629
A+FG Y Q + P K WT ES F DV+ FG +
Sbjct: 166 ADFGLARDILDREYYSVQQHRHARLPVK--WTALESLQTYRFTTK------SDVWSFGVL 217
Query: 630 ILEILTNGR 638
+ E+LT G
Sbjct: 218 LWELLTRGA 226
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 6e-07
Identities = 45/190 (23%), Positives = 76/190 (40%), Gaps = 35/190 (18%)
Query: 471 ITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCY-NRHQAYLLYDYLPNG 526
I +VK + + ++E I + H N++ LLG C + ++ Y+ +G
Sbjct: 118 IHCAVKSLNRITDIGEVSQFLTEGII-MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 176
Query: 527 NLSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 583
+L IR + ++ L VA+G+ FL + + H DL A N + DE +
Sbjct: 177 DLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF--V-HRDLAARNCMLDEKFTVKV 233
Query: 584 AEFG----------FKYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGE 628
A+FG + P K W ES +F DV+ FG
Sbjct: 234 ADFGLARDMYDKEFDSVHNK-TGAKLPVK--WMALESLQTQKFTTK------SDVWSFGV 284
Query: 629 IILEILTNGR 638
++ E++T G
Sbjct: 285 LLWELMTRGA 294
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 8e-07
Identities = 52/211 (24%), Positives = 87/211 (41%), Gaps = 57/211 (27%)
Query: 471 ITVSVKKIEWGAT---RIKIVSEF--ITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525
I V+VK ++ A R ++SE +T++G H+N++ LLG C YL+++Y
Sbjct: 76 IQVAVKMLKEKADSSEREALMSELKMMTQLG--SHENIVNLLGACTLSGPIYLIFEYCCY 133
Query: 526 GNLSEKIRTKRDWAAKYKIVLG-------------------------VARGLCFLHHDCY 560
G+L +R+KR+ ++ +I VA+G+ FL
Sbjct: 134 GDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC 193
Query: 561 PAIPHGDLKASNIVFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ESGEF 611
+ H DL A N++ + +FG + P K W ES
Sbjct: 194 --V-HRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVK--WMAPES--- 245
Query: 612 YNAMKEEMYM---DVYGFGEIIL-EILTNGR 638
+ E +Y DV+ +G I+L EI + G
Sbjct: 246 ---LFEGIYTIKSDVWSYG-ILLWEIFSLGV 272
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 8e-07
Identities = 53/311 (17%), Positives = 102/311 (32%), Gaps = 74/311 (23%)
Query: 103 LVDLNLSHNSFSGQFPVEIF-----NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAF 157
+ L+LS N+ VE+ S+ SL++S N+ L +L
Sbjct: 24 VTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLG---FKNSDELVQIL----- 75
Query: 158 SNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSF-----KSLEFLHLAGNLLNDQ 212
+ ++ LNL+G++ S + ++ L L N + +
Sbjct: 76 -----------AAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSK 124
Query: 213 IPAELG-MLK----TVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSN 267
+E ++T + + N LG + L + +
Sbjct: 125 SSSEFKQAFSNLPASITSLNLRGN--------DLG--------IKSSDELIQIL---AAI 165
Query: 268 LTKLESLFLFRNQLAGQVPWEFSRV-----TTLKSLDLSDNRLS----GPIPESFADLKN 318
+ SL L N LA + E ++ ++ SLDLS N L + F+ + N
Sbjct: 166 PANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPN 225
Query: 319 -LRLLSLMYNEMSGT----VPESLVQLPSLEILFIWNNYFSG-------SLPENLGRNSK 366
+ L+L N + G + L L+ +++ + +L K
Sbjct: 226 HVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQK 285
Query: 367 LRWVDVSTNNF 377
+ VD +
Sbjct: 286 IILVDKNGKEI 296
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 2e-06
Identities = 65/362 (17%), Positives = 107/362 (29%), Gaps = 84/362 (23%)
Query: 72 KNNTIVVGINLS--------MKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIF- 122
V ++LS L A P + LNLS NS + E+
Sbjct: 19 SIPHGVTSLDLSLNNLYSISTVELIQAFANTPAS-----VTSLNLSGNSLGFKNSDELVQ 73
Query: 123 ----NLTSLISLDISRNNFSGHFPGGIQSL--------RNLLVLDAFSNSFSGSVPAEIS 170
++ SL++S N S L + VLD N FS +E
Sbjct: 74 ILAAIPANVTSLNLSGNFLS---YKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFK 130
Query: 171 QL-----EHLKVLNLAGSYFSGPIPSQFGSF-----KSLEFLHLAGNLLNDQIPAELG-M 219
Q + LNL G+ + ++ L+L GN L + AEL
Sbjct: 131 QAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKF 190
Query: 220 LK----TVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLF 275
L +VT +++ N LG I S + SL
Sbjct: 191 LASIPASVTSLDLSAN--------LLGL---------KSYAELAYIFS--SIPNHVVSLN 231
Query: 276 LFRNQLAGQVPWEFSRV----TTLKSLDLSDNRLSGPIPESFADL-------KNLRLLSL 324
L N L G + L+++ L + + E L + + L+
Sbjct: 232 LCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDK 291
Query: 325 MYNEMSGTVPESLVQL-----PSLEILFIWNNYFS-----GSLPENLGRNSKLRWVDVST 374
E+ + + L ++ + N + E+L +LR +
Sbjct: 292 NGKEIHPSHSIPISNLIRELSGKADVPSLLNQCLIFAQKHQTNIEDLNIPDELRESIQTC 351
Query: 375 NN 376
Sbjct: 352 KP 353
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 8e-07
Identities = 54/260 (20%), Positives = 97/260 (37%), Gaps = 48/260 (18%)
Query: 469 TGITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA--YLLYDY 522
G + K++++G A + +VSE + + ++H N++R +R Y++ +Y
Sbjct: 30 DGKILVWKELDYGSMTEAEKQMLVSE-VNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEY 88
Query: 523 LPNGNLSEKIRTKRDWAAKY------KIVLGVARGLCFLH--HDCYPAIPHGDLKASNIV 574
G+L+ I +++ + L H D + H DLK +N+
Sbjct: 89 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVF 148
Query: 575 FDENMEPHLAEFGF-KYLTQLADGSFPAKIAWTESGE-FYNA---MKEEMY---MDVYGF 626
D L +FG + L A T G +Y + M Y D++
Sbjct: 149 LDGKQNVKLGDFGLARILNHDTS------FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSL 202
Query: 627 GEIILEILTNGRLTNAGS--SLQNKPIDGL---LGEMYNENEVGSSSSLQDEIKLVLDVA 681
G ++ E+ A S L K +G + Y S L + I +L++
Sbjct: 203 GCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRY-------SDELNEIITRMLNL- 254
Query: 682 LLCTRSTPSDRPSMEEALKL 701
RPS+EE L+
Sbjct: 255 ------KDYHRPSVEEILEN 268
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 9e-07
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 471 ITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCY-NRHQAYLLYDYLPNG 526
I +VK + + ++E I + H N++ LLG C + ++ Y+ +G
Sbjct: 54 IHCAVKSLNRITDIGEVSQFLTEGII-MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 112
Query: 527 NLSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 583
+L IR + ++ L VA+G+ +L + + H DL A N + DE +
Sbjct: 113 DLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF--V-HRDLAARNCMLDEKFTVKV 169
Query: 584 AEFG 587
A+FG
Sbjct: 170 ADFG 173
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 9e-07
Identities = 25/131 (19%), Positives = 59/131 (45%), Gaps = 10/131 (7%)
Query: 463 CKAV-LPTGITVSVKKIE-WGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 520
A+ + TG V+++++ + +++ I + ++ N++ L + +++
Sbjct: 37 YTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96
Query: 521 DYLPNGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 577
+YL G+L++ + A + + L FLH + + H D+K+ NI+
Sbjct: 97 EYLAGGSLTDVVTETCMDEGQIAA--VCRECLQALEFLHSN---QVIHRDIKSDNILLGM 151
Query: 578 NMEPHLAEFGF 588
+ L +FGF
Sbjct: 152 DGSVKLTDFGF 162
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 9e-07
Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 23/134 (17%)
Query: 467 LPTGITVSVKKIEWGATRIKIVSEFITR-IGT---VRHKNLIRLLGFCYNRHQAYLLYDY 522
T V+VK IE R + E + R I +RH N++R ++ +Y
Sbjct: 42 KLTKELVAVKYIE----RGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97
Query: 523 LPNGNLSEKI----RTKRDWAAKY--KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD 576
G L E+I R D A + +++ GV+ + H I H DLK N + D
Sbjct: 98 ASGGELYERICNAGRFSEDEARFFFQQLLSGVS----YCHSMQ---ICHRDLKLENTLLD 150
Query: 577 ENMEPHL--AEFGF 588
+ P L +FG+
Sbjct: 151 GSPAPRLKICDFGY 164
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 1e-06
Identities = 53/202 (26%), Positives = 82/202 (40%), Gaps = 45/202 (22%)
Query: 471 ITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ-AYLLYDYLPNG 526
TV+VK ++ GAT ++SE I H N++ LLG C ++ ++ G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 527 NLSEKIRTKRDWAAKYKIVLG------------------VARGLCFLHHDCYPAIPHGDL 568
NLS +R+KR+ YK+ VA+G+ FL I H DL
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC--I-HRDL 174
Query: 569 KASNIVFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ESGEFYNAMKEEM 619
A NI+ E + +FG + D P K W E+ + + +
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK--WMAPET------IFDRV 226
Query: 620 YM---DVYGFGEIILEILTNGR 638
Y DV+ FG ++ EI + G
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGA 248
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 50.4 bits (120), Expect = 1e-06
Identities = 35/220 (15%), Positives = 59/220 (26%), Gaps = 29/220 (13%)
Query: 499 RHKNLIRLL-GFCYNRHQAYLLYDYLPNGNLSEKI---------RTKRDWAAKYKIVLGV 548
+L G YLL + +L R A + + +
Sbjct: 144 SQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQL 203
Query: 549 ARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF--KYLTQLADGSFPAKIAWT 606
R L + HG N+ + L + K T+ S P
Sbjct: 204 IRLAANLQSKG---LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVP---VTY 257
Query: 607 ESGEFYNAMKEEMY---MDVYGFGEIILEILTNGRL---TNAGSSLQNKPIDGLLGEMYN 660
EF NA + ++ + G I + L + L +
Sbjct: 258 APREFLNA-STATFTHALNAWQLGLSIYRVWC-LFLPFGLVTPGIKGSWKRPSLRVPGTD 315
Query: 661 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700
GS + L D +K ++ L R EA++
Sbjct: 316 SLAFGSCTPLPDFVKTLIG-RFLNFD--RRRRLLPLEAME 352
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 1e-06
Identities = 35/186 (18%), Positives = 73/186 (39%), Gaps = 32/186 (17%)
Query: 471 ITVSVKKIEWGATRIKIVSEFIT--RI-GTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527
+ V++K + + + +F+ H ++++L+G + +++ + G
Sbjct: 44 LAVAIKTCKNCTSD-SVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGE 101
Query: 528 LSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 584
L ++ ++ ++ ++ L +L + + H D+ A N++ N L
Sbjct: 102 LRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF--V-HRDIAARNVLVSSNDCVKLG 158
Query: 585 EFGF-------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGEIILE 632
+FG Y + G P K W ES F +A DV+ FG + E
Sbjct: 159 DFGLSRYMEDSTYYKA-SKGKLPIK--WMAPESINFRRFTSA------SDVWMFGVCMWE 209
Query: 633 ILTNGR 638
IL +G
Sbjct: 210 ILMHGV 215
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 2e-06
Identities = 33/143 (23%), Positives = 65/143 (45%), Gaps = 12/143 (8%)
Query: 452 EEAARPQSAAGCKAV-LPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFC 510
E+ + KA+ TG V++K++ + +I+ E I+ + ++++ G
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKE-ISIMQQCDSPHVVKYYGSY 93
Query: 511 YNRHQAYLLYDYLPNGNLSEKIRTKR-----DWAAKYKIVLGVARGLCFLHHDCYPAIPH 565
+ +++ +Y G++S+ IR + D A I+ +GL +LH H
Sbjct: 94 FKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIAT--ILQSTLKGLEYLHFM---RKIH 148
Query: 566 GDLKASNIVFDENMEPHLAEFGF 588
D+KA NI+ + LA+FG
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGV 171
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 2e-06
Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 11/131 (8%)
Query: 464 KAV-LPTGITVSVKKI--EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 520
K + T V++K I E I+ + + IT + + + G + +++
Sbjct: 40 KGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 99
Query: 521 DYLPNGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 577
+YL G+ + + A I+ + +GL +LH + H D+KA+N++ E
Sbjct: 100 EYLGGGSALDLLEPGPLDETQIAT--ILREILKGLDYLHSE---KKIHRDIKAANVLLSE 154
Query: 578 NMEPHLAEFGF 588
+ E LA+FG
Sbjct: 155 HGEVKLADFGV 165
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 2e-06
Identities = 26/137 (18%), Positives = 54/137 (39%), Gaps = 13/137 (9%)
Query: 469 TGITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524
G +K+I R + E + + ++H N+++ Y++ DY
Sbjct: 48 DGRQYVIKEINISRMSSKEREESRRE-VAVLANMKHPNIVQYRESFEENGSLYIVMDYCE 106
Query: 525 NGNLSEKIRTKRDWAAKYKIVLG----VARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580
G+L ++I ++ + +L + L +H I H D+K+ NI ++
Sbjct: 107 GGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGT 163
Query: 581 PHLAEFGF-KYLTQLAD 596
L +FG + L +
Sbjct: 164 VQLGDFGIARVLNSTVE 180
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 49.5 bits (118), Expect = 2e-06
Identities = 26/136 (19%), Positives = 55/136 (40%), Gaps = 15/136 (11%)
Query: 463 CKAV-LPTGITVSVKKI---EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518
A PTG V+V++I + + + H N++ ++ ++
Sbjct: 44 NLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103
Query: 519 LYDYLPNGNLSEKIRTKR------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASN 572
+ ++ G+ + I T A I+ GV + L ++HH Y + H +KAS+
Sbjct: 104 VTSFMAYGSAKDLICTHFMDGMNELAIAY--ILQGVLKALDYIHHMGY--V-HRSVKASH 158
Query: 573 IVFDENMEPHLAEFGF 588
I+ + + +L+
Sbjct: 159 ILISVDGKVYLSGLRS 174
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 2e-06
Identities = 28/132 (21%), Positives = 59/132 (44%), Gaps = 12/132 (9%)
Query: 463 CKAV-LPTGITVSVKKI--EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519
C A +G V+VK + R + +E + + +H N++ + + ++L
Sbjct: 62 CLAREKHSGRQVAVKMMDLRKQQRRELLFNE-VVIMRDYQHFNVVEMYKSYLVGEELWVL 120
Query: 520 YDYLPNGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD 576
++L G L++ + R + A + V + L +LH + H D+K+ +I+
Sbjct: 121 MEFLQGGALTDIVSQVRLNEEQIAT--VCEAVLQALAYLHAQ---GVIHRDIKSDSILLT 175
Query: 577 ENMEPHLAEFGF 588
+ L++FGF
Sbjct: 176 LDGRVKLSDFGF 187
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 2e-06
Identities = 34/185 (18%), Positives = 66/185 (35%), Gaps = 26/185 (14%)
Query: 471 ITVSVKKIEWGATRIKIVSEFIT--RI-GTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527
V +K ++ F + + HK+L+ G C + L+ +++ G+
Sbjct: 41 TEVLLKVLDKAHRNYSE--SFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGS 98
Query: 528 LSEKIRTKRD---WAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNI-VFDENMEPH- 582
L ++ ++ K ++ +A + FL + I HG++ A NI + E
Sbjct: 99 LDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTL--I-HGNVCAKNILLIREEDRKTG 155
Query: 583 ------LAEFGF-KYLTQLADGSFPAKIAWT--ESGEFYNAMKEEMYMDVYGFGEIILEI 633
L++ G + I W E E + D + FG + EI
Sbjct: 156 NPPFIKLSDPGISITVLPKDILQER--IPWVPPECIENPKNLNLA--TDKWSFGTTLWEI 211
Query: 634 LTNGR 638
+ G
Sbjct: 212 CSGGD 216
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 3e-06
Identities = 40/267 (14%), Positives = 78/267 (29%), Gaps = 57/267 (21%)
Query: 469 TGITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524
G ++K+ + + E +H +++R + +Y
Sbjct: 35 DGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCN 94
Query: 525 NGNLSEKIRTKRDWAAKY------KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN 578
G+L++ I + + ++L V RGL ++H ++ H D+K SNI
Sbjct: 95 GGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRT 151
Query: 579 MEPHLAEFGFKYLTQLADGSFPAKIA-WTESGEFYNAMKEE---MYM------------- 621
P+ A A KI + EE ++
Sbjct: 152 SIPNAASEE-GDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLP 210
Query: 622 --DVYGFGEIILEILTNGRLTNAGSSLQN------KPIDGLLGEMYNENEVGSSSSLQDE 673
D++ ++ L G I +L S +
Sbjct: 211 KADIFALALTVVCAAGAEPLPRNGDQWHEIRQGRLPRIPQVL-----------SQEFTEL 259
Query: 674 IKLVLDVALLCTRSTPSDRPSMEEALK 700
+K+++ P RPS +K
Sbjct: 260 LKVMIHPD-------PERRPSAMALVK 279
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 3e-06
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 20/142 (14%)
Query: 236 NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTL 295
IP S L++ L LT+L L L +NQ+ F ++T L
Sbjct: 25 GIP------SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKL 78
Query: 296 KSLDLSDNRLSGPIPES-FADLKNLRLLSLMYNEMSGTVPESLV-QLPSLEILFIWNN-- 351
L L +N+L +P F L L+ L+L N++ +VP+ + +L SL+ +++ N
Sbjct: 79 TILYLHENKLQS-LPNGVFDKLTQLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPW 136
Query: 352 --------YFSGSLPENLGRNS 365
Y S L +N +
Sbjct: 137 DCSCPRIDYLSRWLNKNSQKEQ 158
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 3e-06
Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 14/120 (11%)
Query: 261 IPKELSNLTKLESLFLFRNQ---LAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLK 317
+ LS L + L L N ++ S + L+ L L N + I A
Sbjct: 40 MDATLSTLKACKHLALSTNNIEKISS-----LSGMENLRILSLGRNLIKK-IENLDAVAD 93
Query: 318 NLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPE--NLGRNSKLRWVDVSTN 375
L L + YN+++ + +L +L +L++ NN + + E L KL + ++ N
Sbjct: 94 TLEELWISYNQIA--SLSGIEKLVNLRVLYMSNNKIT-NWGEIDKLAALDKLEDLLLAGN 150
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 1e-04
Identities = 38/208 (18%), Positives = 67/208 (32%), Gaps = 63/208 (30%)
Query: 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSF 161
E V+L+ + L + L +S NN I+ + +L
Sbjct: 26 EKVELHGMIPPIEK-MDATLSTLKACKHLALSTNN--------IEKISSL---------- 66
Query: 162 SGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLK 221
S +E+L++L+L + I + +LE L ++ N + + + L
Sbjct: 67 --------SGMENLRILSLGRNLIKK-IENLDAVADTLEELWISYNQIAS--LSGIEKLV 115
Query: 222 TVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQL 281
+ + + N ++ N E+ L + L KLE L L N L
Sbjct: 116 NLRVLYMSNN--------KITNWGEIDKL---------------AALDKLEDLLLAGNPL 152
Query: 282 AGQVPWE----------FSRVTTLKSLD 299
R+ LK LD
Sbjct: 153 YNDYKENNATSEYRIEVVKRLPNLKKLD 180
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 4e-04
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 263 KELSNLTKLESLFL-FRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRL 321
++ T+ E + L ++ S + K L LS N + I S + ++NLR+
Sbjct: 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-I-SSLSGMENLRI 74
Query: 322 LSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNN 376
LSL N + + +LE L+I N + SL + + LR + +S N
Sbjct: 75 LSLGRNLIK-KIENLDAVADTLEELWISYNQIA-SL-SGIEKLVNLRVLYMSNNK 126
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 4e-06
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 19/133 (14%)
Query: 467 LPTGITVSVK-----KIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521
TG V+VK KI KI E I + RH ++I+L +++ +
Sbjct: 33 QLTGHKVAVKILNRQKIRSLDVVGKIKRE-IQNLKLFRHPHIIKLYQVISTPTDFFMVME 91
Query: 522 YLPNGNLSEKI----RTKRDWAAKY--KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 575
Y+ G L + I R + A + +I+ V + H + H DLK N++
Sbjct: 92 YVSGGELFDYICKHGRVEEMEARRLFQQILSAVD----YCHRHM---VVHRDLKPENVLL 144
Query: 576 DENMEPHLAEFGF 588
D +M +A+FG
Sbjct: 145 DAHMNAKIADFGL 157
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 4e-06
Identities = 29/128 (22%), Positives = 47/128 (36%), Gaps = 20/128 (15%)
Query: 469 TGITVSVKKIEWGATR---IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525
TG +VKK+ R + + ++ L G + + L
Sbjct: 82 TGFQCAVKKVRLEVFRVEELVACAGL-------SSPRIVPLYGAVREGPWVNIFMELLEG 134
Query: 526 GNLSEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-ME 580
G+L + I+ D A Y + GL +LH I HGD+KA N++ +
Sbjct: 135 GSLGQLIKQMGCLPEDRALYY--LGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSR 189
Query: 581 PHLAEFGF 588
L +FG
Sbjct: 190 AALCDFGH 197
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 5e-06
Identities = 41/220 (18%), Positives = 72/220 (32%), Gaps = 30/220 (13%)
Query: 499 RHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDW---AAKYKIVLGVARGLCFL 555
H N+IR +R Y+ + L E + K ++ GL L
Sbjct: 76 EHPNVIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHL 134
Query: 556 HHDCYPAIPHGDLKASNIVFDE-----NMEPHLAEFGFKYLTQLADGSFPAKIAWTESG- 609
H I H DLK NI+ ++ +++FG +LA G G
Sbjct: 135 HSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLC--KKLAVGRHSFSRRSGVPGT 189
Query: 610 EFYNA---MKEEMYM------DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYN 660
E + A + E+ D++ G + +++ G S + I +
Sbjct: 190 EGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI------LLG 243
Query: 661 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700
+ + E + ++ P RPS + LK
Sbjct: 244 ACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 5e-06
Identities = 38/204 (18%), Positives = 77/204 (37%), Gaps = 51/204 (25%)
Query: 471 ITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527
V++K ++ A R + E ++H N++ LLG +++ Y +G+
Sbjct: 40 QAVAIKTLKDKAEGPLREEFRHE-AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGD 98
Query: 528 LSEKIRTKRDWAAKY------------------KIVLGVARGLCFL--HHDCYPAIPHGD 567
L E + + + +V +A G+ +L HH + H D
Sbjct: 99 LHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-----VVHKD 153
Query: 568 LKASNIVFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ES---GEFYNAM 615
L N++ + + +++ G Y L + P I W E+ G+F
Sbjct: 154 LATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP--IRWMAPEAIMYGKFSID- 210
Query: 616 KEEMYMDVYGFGEIIL-EILTNGR 638
D++ +G ++L E+ + G
Sbjct: 211 -----SDIWSYG-VVLWEVFSYGL 228
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 5e-06
Identities = 38/188 (20%), Positives = 73/188 (38%), Gaps = 36/188 (19%)
Query: 471 ITVSVKKIEWGATRIKIVSEFIT--RI-GTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527
I V+VK + T + +F++ I + H ++++L+G +++ + P G
Sbjct: 41 INVAVKTCKKDCT-LDNKEKFMSEAVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGE 98
Query: 528 LSEKIRTKRDWAAKYKIV---LGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 584
L + ++ +V L + + + +L + H D+ NI+ L
Sbjct: 99 LGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC--V-HRDIAVRNILVASPECVKLG 155
Query: 585 EFGFKYLTQLADGS---------FPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGEII 630
+FG L++ + P I W ES F A DV+ F +
Sbjct: 156 DFG---LSRYIEDEDYYKASVTRLP--IKWMSPESINFRRFTTA------SDVWMFAVCM 204
Query: 631 LEILTNGR 638
EIL+ G+
Sbjct: 205 WEILSFGK 212
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 6e-06
Identities = 43/268 (16%), Positives = 86/268 (32%), Gaps = 67/268 (25%)
Query: 469 TGITVSVKKIEWGAT-----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 523
G+ V++KK++ R + E I + + H N+I+ ++ ++ +
Sbjct: 56 DGVPVALKKVQIFDLMDAKARADCIKE-IDLLKQLNHPNVIKYYASFIEDNELNIVLELA 114
Query: 524 PNGNLSEKIRTKRDWAAKY------KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 577
G+LS I+ + K + + L +H + H D+K +N+
Sbjct: 115 DAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITA 171
Query: 578 NMEPHLAEFGF-KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM--------------D 622
L + G ++ + A + G Y YM D
Sbjct: 172 TGVVKLGDLGLGRFFSSKTT------AAHSLVGTPY-------YMSPERIHENGYNFKSD 218
Query: 623 VYGFGEIILEILT-----NGRLTNAGSSLQNKPIDG----LLGEMYNENEVGSSSSLQDE 673
++ G ++ E+ G N SL K L + Y S L+
Sbjct: 219 IWSLGCLLYEMAALQSPFYGDKMNL-YSLCKKIEQCDYPPLPSDHY-------SEELRQL 270
Query: 674 IKLVLDVALLCTRSTPSDRPSMEEALKL 701
+ + ++ P RP + +
Sbjct: 271 VNMCINP-------DPEKRPDVTYVYDV 291
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 6e-06
Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 12/129 (9%)
Query: 268 LTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYN 327
L + L L N+L +T L L L+ N+L F L NL+ L L+ N
Sbjct: 62 LPNVRYLALGGNKL--HDISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVEN 119
Query: 328 EMSGTVPESLV-QLPSLEILFIWNNYFSGSLPENL-GRNSKLRWVDVSTNNFNGSIPPDI 385
++ ++P+ + +L +L L + +N SLP+ + + + L +D+S N S+P
Sbjct: 120 QLQ-SLPDGVFDKLTNLTYLNLAHNQLQ-SLPKGVFDKLTNLTELDLSYNQLQ-SLPE-- 174
Query: 386 CSGGVLFKL 394
GV KL
Sbjct: 175 ---GVFDKL 180
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 4e-05
Identities = 55/233 (23%), Positives = 87/233 (37%), Gaps = 50/233 (21%)
Query: 105 DLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGS 164
NL S + + L S+ + + ++ GIQ L N+ L N
Sbjct: 23 KANLKKKSVT-DAVTQN-ELNSIDQIIANNSDIK--SVQGIQYLPNVRYLALGGN----- 73
Query: 165 VPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAEL-GMLKTV 223
+L + +L +L L GN L +P + L +
Sbjct: 74 ------KLHDISA---------------LKELTNLTYLILTGNQLQ-SLPNGVFDKLTNL 111
Query: 224 THMEIGYNFYQ---GNIPWQLGNMSEVQYLDIAGANLSGSIPKEL-SNLTKLESLFLFRN 279
+ + N Q + +L N+ YL++A L S+PK + LT L L L N
Sbjct: 112 KELVLVENQLQSLPDGVFDKLTNL---TYLNLAHNQLQ-SLPKGVFDKLTNLTELDLSYN 167
Query: 280 QL----AGQVPWEFSRVTTLKSLDLSDNRLSGPIPE-SFADLKNLRLLSLMYN 327
QL G F ++T LK L L N+L +P+ F L +L+ + L N
Sbjct: 168 QLQSLPEGV----FDKLTQLKDLRLYQNQLKS-VPDGVFDRLTSLQYIWLHDN 215
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 48.1 bits (114), Expect = 6e-06
Identities = 38/251 (15%), Positives = 68/251 (27%), Gaps = 54/251 (21%)
Query: 479 EWGATRIKIVSEFITRIGTVRHKNLIRL--LGFCYNRH--QAYLLYDYLPNGNLSEKIRT 534
+ K+ FI V+ ++ + + NL
Sbjct: 138 IKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEV 197
Query: 535 KRD---------WAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 585
A+ ++ L V R L LHH + H L+ +IV D+ L
Sbjct: 198 LLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYLRPVDIVLDQRGGVFLTG 254
Query: 586 FGFKYLTQLADGSFPAKIAWTESGEFYNA---MKEEMYM-------------DVYGFGEI 629
F + DG+ A + G + E M D + G
Sbjct: 255 FEHL----VRDGA----SAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLA 306
Query: 630 ILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTP 689
I I L N + G ++ + ++ ++ L
Sbjct: 307 IYWIWC-ADLPNTDDAAL-----GGSEWIFRSCK-NIPQPVRALLEGFLRY-------PK 352
Query: 690 SDRPSMEEALK 700
DR +A++
Sbjct: 353 EDRLLPLQAME 363
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 7e-06
Identities = 51/248 (20%), Positives = 91/248 (36%), Gaps = 77/248 (31%)
Query: 499 RHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKY---------------- 542
+H+++++ G C + ++++Y+ +G+L++ +R A
Sbjct: 75 QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 134
Query: 543 --KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF-------KYLTQ 593
I +A G+ +L + + H DL N + N+ + +FG Y
Sbjct: 135 MLHIASQIASGMVYLASQHF--V-HRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRV 191
Query: 594 LADGSFPAKIAWT--ES---GEFYNAMKEEMYMDVYGFGEIIL-EILTNGR-----LTNA 642
P I W ES +F DV+ FG +IL EI T G+ L+N
Sbjct: 192 GGHTMLP--IRWMPPESIMYRKFTTE------SDVWSFG-VILWEIFTYGKQPWFQLSNT 242
Query: 643 --------GSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPS 694
G L+ +P E+Y+ V L C + P R +
Sbjct: 243 EVIECITQGRVLE-RP-RVCPKEVYD-------------------VMLGCWQREPQQRLN 281
Query: 695 MEEALKLL 702
++E K+L
Sbjct: 282 IKEIYKIL 289
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 7e-06
Identities = 58/280 (20%), Positives = 93/280 (33%), Gaps = 68/280 (24%)
Query: 464 KAV-LPTGITVSVKKI--EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 520
A P V++K+I E T + + + I + H N++ + + +L+
Sbjct: 33 AAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92
Query: 521 DYLPNGNLSEKIRTKRDWAAKYKIVLG----------VARGLCFLHHDCYPAIPHGDLKA 570
L G++ + I+ VL V GL +LH + H D+KA
Sbjct: 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKA 149
Query: 571 SNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIA----------W-----TESGEFYNAM 615
NI+ E+ +A+FG LA G + W E Y+
Sbjct: 150 GNILLGEDGSVQIADFGVS--AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFK 207
Query: 616 KEEMYMDVYGFGEIILEILTNGR---------------LTNAGSSLQNKPIDGLLGEMYN 660
D++ FG +E L G L N SL+ D + + Y
Sbjct: 208 A-----DIWSFGITAIE-LATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKY- 260
Query: 661 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700
S + I L L P RP+ E L+
Sbjct: 261 ------GKSFRKMISLCLQK-------DPEKRPTAAELLR 287
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 8e-06
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 236 NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTL 295
IP ++ YLD+ +L LT L L+L N+L F+++T+L
Sbjct: 25 GIP------AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSL 78
Query: 296 KSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLV-QLPSLEILFIWNN 351
L+LS N+L F L L+ L+L N++ ++P+ + +L L+ L ++ N
Sbjct: 79 TYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQN 134
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 8e-06
Identities = 51/280 (18%), Positives = 100/280 (35%), Gaps = 79/280 (28%)
Query: 471 ITVSVKKIEWGATRIKI--VSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528
+ V+VK ++ + + E + ++H++++R G C ++++Y+ +G+L
Sbjct: 72 MLVAVKALKEASESARQDFQREAEL-LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL 130
Query: 529 SEKIRTKRDWAAKY-----------------KIVLGVARGLCFLHHDCYPAIPHGDLKAS 571
+ +R+ A + VA G+ +L + + H DL
Sbjct: 131 NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHF--V-HRDLATR 187
Query: 572 NIVFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ES---GEFYNAMKEEM 619
N + + + + +FG Y P + W ES +F
Sbjct: 188 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR--WMPPESILYRKFTTE----- 240
Query: 620 YMDVYGFGEIIL-EILTNGR-----LTN--------AGSSLQNKPIDGLLGEMYNENEVG 665
DV+ FG ++L EI T G+ L+N G L+ +P E+Y
Sbjct: 241 -SDVWSFG-VVLWEIFTYGKQPWYQLSNTEAIDCITQGRELE-RP-RACPPEVYA----- 291
Query: 666 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705
++ C + P R S+++ L L
Sbjct: 292 ----------IMRG----CWQREPQQRHSIKDVHARLQAL 317
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 8e-06
Identities = 22/130 (16%), Positives = 51/130 (39%), Gaps = 13/130 (10%)
Query: 468 PTGITVSVKKIEW---GATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524
P+G ++VK+I + +++ + + + +++ G + ++ + +
Sbjct: 45 PSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELM- 103
Query: 525 NGNLSEKIRTKRDWAAKY-------KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 577
+ + + + KI L + L L + I H D+K SNI+ D
Sbjct: 104 STSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDR 161
Query: 578 NMEPHLAEFG 587
+ L +FG
Sbjct: 162 SGNIKLCDFG 171
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 9e-06
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 19/133 (14%)
Query: 467 LPTGITVSVK-----KIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521
TG V+VK KI KI E I + RH ++I+L +++ +
Sbjct: 38 ELTGHKVAVKILNRQKIRSLDVVGKIRRE-IQNLKLFRHPHIIKLYQVISTPSDIFMVME 96
Query: 522 YLPNGNLSEKI----RTKRDWAAKY--KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 575
Y+ G L + I R + + +I+ GV + H + H DLK N++
Sbjct: 97 YVSGGELFDYICKNGRLDEKESRRLFQQILSGVD----YCHRHM---VVHRDLKPENVLL 149
Query: 576 DENMEPHLAEFGF 588
D +M +A+FG
Sbjct: 150 DAHMNAKIADFGL 162
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 1e-05
Identities = 61/292 (20%), Positives = 103/292 (35%), Gaps = 93/292 (31%)
Query: 471 ITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527
TV+VK ++ A+ ++SE + V H ++I+L G C L+ +Y G+
Sbjct: 54 TTVAVKMLKENASPSELRDLLSE-FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGS 112
Query: 528 LSEKIRTKRDWAAKYKIVLG--------------------------VARGLCFL--HHDC 559
L +R R Y G +++G+ +L
Sbjct: 113 LRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK-- 170
Query: 560 YPAIPHGDLKASNIVFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ESGE 610
+ H DL A NI+ E + +++FG + + G P K W ES
Sbjct: 171 ---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVK--WMAIES-- 223
Query: 611 FYNAMKEEMYM---DVYGFGEIIL-EILTNGR-----LTNA--------GSSLQNKPIDG 653
+ + +Y DV+ FG ++L EI+T G + G ++ +P D
Sbjct: 224 ----LFDHIYTTQSDVWSFG-VLLWEIVTLGGNPYPGIPPERLFNLLKTGHRME-RP-DN 276
Query: 654 LLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705
EMY + L C + P RP + K L +
Sbjct: 277 CSEEMY-------------------RLMLQCWKQEPDKRPVFADISKDLEKM 309
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 47.3 bits (111), Expect = 1e-05
Identities = 24/199 (12%), Positives = 61/199 (30%), Gaps = 25/199 (12%)
Query: 127 LISLDISRNNFSGHFPGGIQS-LRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYF 185
+D S + L + +L+ + ++ +LK L +
Sbjct: 146 WGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLSIGKKPRPNLKSLEIISGGL 205
Query: 186 SGPIPSQFGS--FKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGN 243
+ +LE L L + + ++ + + + +
Sbjct: 206 PDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPL---------------FSKDR 250
Query: 244 MSEVQYLDIAGANLSGSIPKELSN---LTKLESLFLFRNQL----AGQVPWEFSRVTTLK 296
+++L I A + + L +LE++ + L A + ++ LK
Sbjct: 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLK 310
Query: 297 SLDLSDNRLSGPIPESFAD 315
+++ N LS + +
Sbjct: 311 FINMKYNYLSDEMKKELQK 329
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 44.6 bits (104), Expect = 7e-05
Identities = 23/177 (12%), Positives = 63/177 (35%), Gaps = 24/177 (13%)
Query: 172 LEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM--LKTVTHMEIG 229
L+ + +LN + + +L+ L + L D + ++ L + + +
Sbjct: 168 LDAMPLLNNLKIKGTNNLSIGKKPRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVL- 226
Query: 230 YNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVP--- 286
+ + +++ S L+ L + + V
Sbjct: 227 ----YVGVEDYGFDGD----MNVFRPLFSKD------RFPNLKWLGIVDAEEQNVVVEMF 272
Query: 287 WEFSRVTTLKSLDLSDNRLSG----PIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339
E + L+++D+S L+ + + +K+L+ +++ YN +S + + L +
Sbjct: 273 LESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 42.2 bits (98), Expect = 5e-04
Identities = 32/163 (19%), Positives = 60/163 (36%), Gaps = 21/163 (12%)
Query: 233 YQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEF--S 290
Q ++ L M + L I G N ++ L+SL + L V + S
Sbjct: 160 EQVDLSPVLDAMPLLNNLKIKGTN---NLSIGKKPRPNLKSLEIISGGLPDSVVEDILGS 216
Query: 291 RVTTLKSLDL---SDNRLSGPIPESFADL------KNLRLLSLMYNEMSGTVPESLVQ-- 339
+ L+ L L ++ F L NL+ L ++ E V E ++
Sbjct: 217 DLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESD 276
Query: 340 -LPSLEILFIWNNYFSGS----LPENLGRNSKLRWVDVSTNNF 377
LP LE + I + L +++ + L+++++ N
Sbjct: 277 ILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYL 319
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 1e-05
Identities = 22/104 (21%), Positives = 35/104 (33%), Gaps = 17/104 (16%)
Query: 499 RHKNLIRLLGFCYNRHQ-------AYLLYDYLPNGNLSEKIRTKRDWAAKY-------KI 544
H N+++ + +LL L G L E ++ + KI
Sbjct: 84 GHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKME--SRGPLSCDTVLKI 141
Query: 545 VLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 588
R + +H P I H DLK N++ L +FG
Sbjct: 142 FYQTCRAVQHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGS 184
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 46.8 bits (111), Expect = 1e-05
Identities = 28/125 (22%), Positives = 57/125 (45%), Gaps = 8/125 (6%)
Query: 468 PTGITVSVKKIEW---GATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524
P+G+ ++ K I A R +I+ E + + ++ G Y+ + + +++
Sbjct: 56 PSGLVMARKLIHLEIKPAIRNQIIRE-LQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 114
Query: 525 NGNLSEKIRTKRDWAAKY--KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 582
G+L + ++ + K+ + V +GL +L I H D+K SNI+ + E
Sbjct: 115 GGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIK 172
Query: 583 LAEFG 587
L +FG
Sbjct: 173 LCDFG 177
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 2e-05
Identities = 22/127 (17%), Positives = 49/127 (38%), Gaps = 11/127 (8%)
Query: 468 PTGITVSVKKIEW---GATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524
TG ++VK++ +I+ + + + +++ G ++ + +
Sbjct: 48 KTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMG 107
Query: 525 NGNLSEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580
K R + K + + + + L +L + H D+K SNI+ DE +
Sbjct: 108 TCAEKLKKRMQGPIPERILGK--MTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQ 163
Query: 581 PHLAEFG 587
L +FG
Sbjct: 164 IKLCDFG 170
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 2e-05
Identities = 26/138 (18%), Positives = 56/138 (40%), Gaps = 30/138 (21%)
Query: 467 LPTGITVSVK-----KIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL--- 518
T V++K ++ +++ E I+ + +RH ++I+L +
Sbjct: 31 YKTQQKVALKFISRQLLKKSDMHMRVERE-ISYLKLLRHPHIIKLYDVITTPTDIVMVIE 89
Query: 519 -----LYDYL-PNGNLSEKIRTKRDWAAKY--KIVLGVARGLCFLHHDCYPAIPHGDLKA 570
L+DY+ ++E ++ +I+ + + H I H DLK
Sbjct: 90 YAGGELFDYIVEKKRMTEDE------GRRFFQQIICAIE----YCHRHK---IVHRDLKP 136
Query: 571 SNIVFDENMEPHLAEFGF 588
N++ D+N+ +A+FG
Sbjct: 137 ENLLLDDNLNVKIADFGL 154
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 2e-05
Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 12/127 (9%)
Query: 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNL 319
S+P + + L+L NQ+ P F + LK L L N+L F L L
Sbjct: 33 SVPAGIPTNA--QILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQL 90
Query: 320 RLLSLMYNEMSGTVPE----SLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTN 375
+L L N+++ +P LV L+ LF+ N + LP + R + L + + N
Sbjct: 91 TVLDLGTNQLT-VLPSAVFDRLVH---LKELFMCCNKLT-ELPRGIERLTHLTHLALDQN 145
Query: 376 NFNGSIP 382
SIP
Sbjct: 146 QLK-SIP 151
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 9e-05
Identities = 40/165 (24%), Positives = 64/165 (38%), Gaps = 29/165 (17%)
Query: 164 SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV 223
SVPA I + ++L L + + P F S +L+ L+L N L
Sbjct: 33 SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-------------- 76
Query: 224 THMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKEL-SNLTKLESLFLFRNQLA 282
+ +G + L + LD+ L+ +P + L L+ LF+ N+L
Sbjct: 77 GALPVG-------VFDSLTQL---TVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLT 125
Query: 283 GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYN 327
+P R+T L L L N+L +F L +L L N
Sbjct: 126 E-LPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGN 169
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 4e-04
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Query: 293 TTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLV-QLPSLEILFIWNN 351
T + L L DN+++ P F L NL+ L L N++ +P + L L +L + N
Sbjct: 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPVGVFDSLTQLTVLDLGTN 98
Query: 352 YFSGSLPENL-GRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSN 399
+ LP + R L+ + + N +P I L L L N
Sbjct: 99 QLT-VLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQN 145
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 2e-05
Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 18/132 (13%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITR----IGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524
TG +VK I + K E + R + + H N+++L F ++ YL+ +
Sbjct: 50 TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYT 109
Query: 525 NGNLSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---D 576
G L ++I ++ D AA +I+ V G+ ++H + I H DLK N++
Sbjct: 110 GGELFDEIISRKRFSEVD-AA--RIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKS 163
Query: 577 ENMEPHLAEFGF 588
++ + +FG
Sbjct: 164 KDANIRIIDFGL 175
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 2e-05
Identities = 23/137 (16%), Positives = 50/137 (36%), Gaps = 22/137 (16%)
Query: 464 KAVLPTGITVSVKKIEWGATRIKIVSEFITRIG---TVRHKNL--IRLLGFCYNRHQAYL 518
+ + ++K + + + + I ++ + IRL + Y+
Sbjct: 46 QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105
Query: 519 LYDYLPNGNLSEKIRTKR----DWAAKY--KIVLGVARGLCFLH-HDCYPAIPHGDLKAS 571
+ + N +L+ ++ K+ Y ++ V +H H I H DLK +
Sbjct: 106 VMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH----TIHQHG----IVHSDLKPA 156
Query: 572 NIVFDENMEPHLAEFGF 588
N + + M L +FG
Sbjct: 157 NFLIVDGM-LKLIDFGI 172
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 2e-05
Identities = 23/209 (11%), Positives = 60/209 (28%), Gaps = 33/209 (15%)
Query: 494 RIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLC 553
R+ + + R+L + R ++ +++ G+L E T + + +A
Sbjct: 84 RLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAAD 143
Query: 554 FLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYN 613
H + S + + + LA + D +
Sbjct: 144 AAHRA---GVALSIDHPSRVRVSIDGDVVLAYPAT-----MPDANPQD------------ 183
Query: 614 AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673
D+ G G + +L R + +++ + + + + + +
Sbjct: 184 --------DIRGIGASLYALLV-NRWPLPEAGVRS-GLAPAERDT--AGQPIEPADIDRD 231
Query: 674 IKLVLD-VALLCTRSTPSDRPSMEEALKL 701
I + VA + R + +
Sbjct: 232 IPFQISAVAARSVQGDGGIRSASTLLNLM 260
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 2e-05
Identities = 31/134 (23%), Positives = 53/134 (39%), Gaps = 14/134 (10%)
Query: 463 CKAV-LPTGITVSVKKI--EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519
KA TG + K I + + E I + T H +++LLG Y+ + +++
Sbjct: 36 YKAKNKETGALAAAKVIETKSEEELEDYIVE-IEILATCDHPYIVKLLGAYYHDGKLWIM 94
Query: 520 YDYLPNGNLSEKIRTKR-----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIV 574
++ P G + + + + L FLH I H DLKA N++
Sbjct: 95 IEFCPGGAVDAIMLELDRGLTEPQIQV--VCRQMLEALNFLHSK---RIIHRDLKAGNVL 149
Query: 575 FDENMEPHLAEFGF 588
+ LA+FG
Sbjct: 150 MTLEGDIRLADFGV 163
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 2e-05
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 14/97 (14%)
Query: 500 HKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTK-----RDWAAKYKIVLGVARGLCF 554
H N+I+L ++ YL+ ++ G L E+I + D AA I+ + G+C+
Sbjct: 105 HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECD-AA--NIMKQILSGICY 161
Query: 555 LHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGF 588
LH I H D+K NI+ + + + +FG
Sbjct: 162 LHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGL 195
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 2e-05
Identities = 32/216 (14%), Positives = 62/216 (28%), Gaps = 45/216 (20%)
Query: 510 CYNRHQAYLLYDYLPNGNLSEKIR-----TKRDWAAKYKIVLGVARGLCFLHHDCYPAIP 564
+ Y+ NL + + R+ I + +A + FLH +
Sbjct: 130 SSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG---LM 186
Query: 565 HGDLKASNIVFDENMEPHLAEFGFKYLTQLA-DGSFPAKIAWTESGEFYNAMKEE----- 618
H DLK SNI F + + +FG L + + A
Sbjct: 187 HRDLKPSNIFFTMDDVVKVGDFG------LVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240
Query: 619 MYM--------------DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 664
+YM D++ G I+ E+L + I + +
Sbjct: 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLY---SFSTQMERVRI-ITDVRNLKFPLLFT 296
Query: 665 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700
++ +P++RP + ++
Sbjct: 297 QKYPQEHMMVQ-------DMLSPSPTERPEATDIIE 325
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 3e-05
Identities = 44/271 (16%), Positives = 82/271 (30%), Gaps = 58/271 (21%)
Query: 464 KAVLPTGITVSVKKIEWGATRIKIVSEFITRIG---TVRHKNL--IRLLGFCYNRHQAYL 518
+ + ++K + + + + I ++ + IRL + Y+
Sbjct: 74 QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 133
Query: 519 LYDYLPNGNLSEKIRTKR----DWAAKY--KIVLGVARGLCFLH-HDCYPAIPHGDLKAS 571
+ + N +L+ ++ K+ Y ++ V +H H I H DLK +
Sbjct: 134 VMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH----TIHQHG----IVHSDLKPA 184
Query: 572 NIVFDENMEPHLAEFGF-KYLTQLADGSFPAKIAWT----------ESGEFYNAMKEEMY 620
N + + M L +FG + + K +
Sbjct: 185 NFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSK 243
Query: 621 M----DVYGFGEIILEILTNGRL-----TNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 671
+ DV+ G I+ + G+ N S L E + LQ
Sbjct: 244 ISPKSDVWSLGCILYYMTY-GKTPFQQIINQISKLHAIIDPNHEIEFPD----IPEKDLQ 298
Query: 672 DEIK--LVLDVALLCTRSTPSDRPSMEEALK 700
D +K L D P R S+ E L
Sbjct: 299 DVLKCCLKRD---------PKQRISIPELLA 320
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 3e-05
Identities = 47/250 (18%), Positives = 77/250 (30%), Gaps = 44/250 (17%)
Query: 469 TGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524
G +VK+ R + ++E + +H +RL YL +
Sbjct: 81 DGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC- 139
Query: 525 NGNLSEKIRTKRDW---AAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 581
+L + A + + L LH + H D+K +NI
Sbjct: 140 GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRC 196
Query: 582 HLAEFGFKYLTQLADGSFPAKIAWTESGE-FYNAMKEEMYMDVYGF-------GEIILEI 633
L +FG L +L + G+ Y M E+ YG G ILE+
Sbjct: 197 KLGDFGL--LVELGTAGA----GEVQEGDPRY--MAPELLQGSYGTAADVFSLGLTILEV 248
Query: 634 LTNGRLTNAGSSLQ---NKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPS 690
N L + G Q + SS L+ + ++L+ P
Sbjct: 249 ACNMELPHGGEGWQQLRQGYLPPEFTAGL-------SSELRSVLVMMLEPD-------PK 294
Query: 691 DRPSMEEALK 700
R + E L
Sbjct: 295 LRATAEALLA 304
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 3e-05
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 21/135 (15%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRIGTVR----------HKNLIRLLGFCYNRHQAYL 518
TG +VK +E A R+ R T R H ++I L+ + +L
Sbjct: 118 TGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFL 177
Query: 519 LYDYLPNGNLSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNI 573
++D + G L + + K ++ I+ + + FLH + I H DLK NI
Sbjct: 178 VFDLMRKGELFDYLTEKVALSEKE-TRS--IMRSLLEAVSFLHAN---NIVHRDLKPENI 231
Query: 574 VFDENMEPHLAEFGF 588
+ D+NM+ L++FGF
Sbjct: 232 LLDDNMQIRLSDFGF 246
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 4e-05
Identities = 23/137 (16%), Positives = 50/137 (36%), Gaps = 22/137 (16%)
Query: 464 KAVLPTGITVSVKKIEWGATRIKIVSEFITRIG---TVRHKNL--IRLLGFCYNRHQAYL 518
+ + ++K + + + + I ++ + IRL + Y+
Sbjct: 27 QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 86
Query: 519 LYDYLPNGNLSEKIRTKR----DWAAKY--KIVLGVARGLCFLH-HDCYPAIPHGDLKAS 571
+ + N +L+ ++ K+ Y ++ V +H H I H DLK +
Sbjct: 87 VMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH----TIHQHG----IVHSDLKPA 137
Query: 572 NIVFDENMEPHLAEFGF 588
N + + M L +FG
Sbjct: 138 NFLIVDGM-LKLIDFGI 153
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 4e-05
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 19/132 (14%)
Query: 467 LPTGITVSVKKIEWGATRIKIVSEFITR-IGT---VRHKNLIRLLGFCYNRHQAYLLYDY 522
T V+VK ++ R E I + I + H+N+++ G + YL +Y
Sbjct: 29 RVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86
Query: 523 LPNGNLSEKI----RTKRDWAAKY--KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD 576
G L ++I A ++ +++ GV +LH I H D+K N++ D
Sbjct: 87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGI---GITHRDIKPENLLLD 139
Query: 577 ENMEPHLAEFGF 588
E +++FG
Sbjct: 140 ERDNLKISDFGL 151
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 5e-05
Identities = 29/131 (22%), Positives = 58/131 (44%), Gaps = 17/131 (12%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRIGTVR---HKNLIRLLGFCYNRHQAYLLYDYLPN 525
T + ++K I + S+ + + ++ H N+++L F ++ YL+ +
Sbjct: 61 THVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKG 120
Query: 526 GNLSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DE 577
G L ++I + D AA I+ V G+ +LH I H DLK N++ ++
Sbjct: 121 GELFDEIIHRMKFNEVD-AA--VIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEK 174
Query: 578 NMEPHLAEFGF 588
+ + +FG
Sbjct: 175 DALIKIVDFGL 185
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 45.4 bits (107), Expect = 6e-05
Identities = 28/148 (18%), Positives = 47/148 (31%), Gaps = 32/148 (21%)
Query: 469 TGITVSVKKIE---WGATRIKIVSEF-ITRIGTVRHKNLIRLL------GFCYNRHQAYL 518
TG V++K+ R + E I + + H N++ L
Sbjct: 38 TGEQVAIKQCRQELSPKNRERWCLEIQIMK--KLNHPNVVSAREVPDGLQKLAPNDLPLL 95
Query: 519 LYDYLPNGNLSEKIRTKR-------DWAAKY--KIVLGVARGLCFLHHDCYPAIPHGDLK 569
+Y G+L + + I + +LH + I H DLK
Sbjct: 96 AMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR----YLHENR---IIHRDLK 148
Query: 570 ASNIVFDENMEPH---LAEFGF-KYLTQ 593
NIV + + + G+ K L Q
Sbjct: 149 PENIVLQPGPQRLIHKIIDLGYAKELDQ 176
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 6e-05
Identities = 25/144 (17%), Positives = 52/144 (36%), Gaps = 37/144 (25%)
Query: 467 LPTGITVSVKKIEWGATRIKIVSEFITRIG-------TVRHKNLIRLLGFCYN--RHQAY 517
T +VK ++ +++ + + +RHKN+I+L+ YN + + Y
Sbjct: 27 SETLCRRAVKILK--KKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY 84
Query: 518 L-----------LYDYLPNGNLSEKIRTKRDWAAKY--KIVLGVARGLCFLHHDCYPAIP 564
+ + D +P A Y +++ G+ +LH I
Sbjct: 85 MVMEYCVCGMQEMLDSVPEKRFPVCQ------AHGYFCQLIDGLE----YLHSQG---IV 131
Query: 565 HGDLKASNIVFDENMEPHLAEFGF 588
H D+K N++ ++ G
Sbjct: 132 HKDIKPGNLLLTTGGTLKISALGV 155
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 7e-05
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 19/132 (14%)
Query: 467 LPTGITVSVKKIEWGATRIKIVSEFITR-IGT---VRHKNLIRLLGFCYNRHQAYLLYDY 522
T V+VK ++ R E I + I + H+N+++ G + YL +Y
Sbjct: 29 RVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86
Query: 523 LPNGNLSEKI----RTKRDWAAKY--KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD 576
G L ++I A ++ +++ GV +LH I H D+K N++ D
Sbjct: 87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGI---GITHRDIKPENLLLD 139
Query: 577 ENMEPHLAEFGF 588
E +++FG
Sbjct: 140 ERDNLKISDFGL 151
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 8e-05
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 500 HKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTK-----RDWAAKYKIVLGVARGLCF 554
H N+I+L +L++D + G L + + K ++ + +L V +C
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV---ICA 139
Query: 555 LHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 588
LH I H DLK NI+ D++M L +FGF
Sbjct: 140 LHKL---NIVHRDLKPENILLDDDMNIKLTDFGF 170
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 8e-05
Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 22/111 (19%)
Query: 498 VRHKNLIRLLGFCY------NRHQAYLLYDYLPNGNLSEKIRTKR---DWAAKY--KIVL 546
+ H N+++L N Y++++ + G + E K D A Y ++
Sbjct: 93 LDHPNVVKL----VEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIK 148
Query: 547 GVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597
G+ +LH Y I H D+K SN++ E+ +A+FG + +D
Sbjct: 149 GIE----YLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA 192
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 9e-05
Identities = 27/133 (20%), Positives = 53/133 (39%), Gaps = 24/133 (18%)
Query: 469 TGITVSVKKI------EW---GATR-IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518
TG V++KK A R I+++ + +H NL+ LL + + +L
Sbjct: 27 TGQIVAIKKFLESEDDPVIKKIALREIRMLKQL-------KHPNLVNLLEVFRRKRRLHL 79
Query: 519 LYDYLPNGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 575
+++Y + + ++ + I + + F H H D+K NI+
Sbjct: 80 VFEYCDH-TVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILI 135
Query: 576 DENMEPHLAEFGF 588
++ L +FGF
Sbjct: 136 TKHSVIKLCDFGF 148
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 1e-04
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRIGT-VRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527
T + +VK I+ + +E I + +H N+I L + Y++ + + G
Sbjct: 46 TNMEFAVKIID---KSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGE 102
Query: 528 LSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENM 579
L +KI + R+ A+ ++ + + + +LH + H DLK SNI++ N
Sbjct: 103 LLDKILRQKFFSERE-AS--AVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNP 156
Query: 580 EP-HLAEFGF 588
E + +FGF
Sbjct: 157 ESIRICDFGF 166
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 Length = 185 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 1e-04
Identities = 25/153 (16%), Positives = 52/153 (33%), Gaps = 19/153 (12%)
Query: 246 EVQYLDIAGANLSGSIPKELSNLTKLESLFLFR-NQLAGQVPWEFSRV----TTLKSLDL 300
V + ++ ++ + +N LE + L + + T +K +
Sbjct: 13 PVPDEEPNSTDVEETLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSI 72
Query: 301 SDNRLSGPIPESFADL----KNLRLLSLMYNEMSGT----VPESLVQLPSLEILFIWNNY 352
R + P+ + A++ L+ L++ N +SG+ + E+L SL L I N
Sbjct: 73 VGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQS 132
Query: 353 FS------GSLPENLGRNSKLRWVDVSTNNFNG 379
+ L +N+ L
Sbjct: 133 QPLGNNVEMEIANMLEKNTTLLKFGYHFTQQGP 165
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 1e-04
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 24/133 (18%)
Query: 469 TGITVSVKKI------EWG---ATR-IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518
TG V++KK + A R IK++ + RH+NL+ LL C + + YL
Sbjct: 49 TGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL-------RHENLVNLLEVCKKKKRWYL 101
Query: 519 LYDYLPNGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 575
+++++ + + + + D+ K + + G+ F H I H D+K NI+
Sbjct: 102 VFEFVDH-TILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILV 157
Query: 576 DENMEPHLAEFGF 588
++ L +FGF
Sbjct: 158 SQSGVVKLCDFGF 170
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 1e-04
Identities = 26/133 (19%), Positives = 54/133 (40%), Gaps = 18/133 (13%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITR----IGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524
+G+ +K I R ++ E I + ++ H N+I++ + H Y++ +
Sbjct: 46 SGLERVIKTIN--KDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCE 103
Query: 525 NGNLSEKIRTKRDWAAKY------KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF--- 575
G L E+I + + +++ + L + H + H DLK NI+F
Sbjct: 104 GGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDT 160
Query: 576 DENMEPHLAEFGF 588
+ + +FG
Sbjct: 161 SPHSPIKIIDFGL 173
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 33/143 (23%), Positives = 54/143 (37%), Gaps = 30/143 (20%)
Query: 463 CKAV-LPTGITVSVKKIEWGATRIK-----IVSEFITRIGTVRHKNLIRLLGFCYNRHQA 516
A + V++KK+ + + I+ E + + +RH N I+ G H A
Sbjct: 71 YFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKE-VRFLQKLRHPNTIQYRGCYLREHTA 129
Query: 517 YLLYDYL----------PNGNLSEK-IRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPH 565
+L+ +Y L E I + G +GL +LH + H
Sbjct: 130 WLVMEYCLGSASDLLEVHKKPLQEVEIAA---------VTHGALQGLAYLHSH---NMIH 177
Query: 566 GDLKASNIVFDENMEPHLAEFGF 588
D+KA NI+ E L +FG
Sbjct: 178 RDVKAGNILLSEPGLVKLGDFGS 200
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 2e-04
Identities = 33/142 (23%), Positives = 54/142 (38%), Gaps = 28/142 (19%)
Query: 463 CKAV-LPTGITVSVKKI------EWGATR----IKIVSEFITRIGTVRHKNLIRLL---- 507
C A V++KK+ + A R + ++ HKN+I LL
Sbjct: 79 CAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-------NHKNIISLLNVFT 131
Query: 508 --GFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPH 565
YL+ + + NL + I+ + D ++ + G+ LH I H
Sbjct: 132 PQKTLEEFQDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIH 187
Query: 566 GDLKASNIVFDENMEPHLAEFG 587
DLK SNIV + + +FG
Sbjct: 188 RDLKPSNIVVKSDCTLKILDFG 209
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 43.3 bits (101), Expect = 2e-04
Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 3/78 (3%)
Query: 511 YNRHQAYLLYDYLPNGNLSEKIRTK-RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLK 569
+ Q +++ ++ G E++RTK A I+ + L H DL
Sbjct: 132 FKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEA--SLRFEHRDLH 189
Query: 570 ASNIVFDENMEPHLAEFG 587
N++ + L
Sbjct: 190 WGNVLLKKTSLKKLHYTL 207
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 21/133 (15%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRIG---TVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525
T +VK I + + K S + + + H N+++L + Y++ +
Sbjct: 46 TQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTG 105
Query: 526 GNLSEKIRTK-----RDWAAKY--KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF--- 575
G L ++I + D AA+ ++ G+ ++H I H DLK NI+
Sbjct: 106 GELFDEIIKRKRFSEHD-AARIIKQVFSGIT----YMHKH---NIVHRDLKPENILLESK 157
Query: 576 DENMEPHLAEFGF 588
+++ + + +FG
Sbjct: 158 EKDCDIKIIDFGL 170
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 2e-04
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 14/99 (14%)
Query: 498 VRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDW-----AAKY-KIVLGVARG 551
+RH L+ L + ++ ++Y+++ G L EK+ + + A +Y + V G
Sbjct: 211 LRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCK---G 267
Query: 552 LCFLHHDCYPAIPHGDLKASNIVFDENMEPHL--AEFGF 588
LC +H + H DLK NI+F L +FG
Sbjct: 268 LCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGL 303
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 3e-04
Identities = 30/140 (21%), Positives = 55/140 (39%), Gaps = 21/140 (15%)
Query: 464 KAV-LPTGITVSVKKIEWGATRIK-IVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521
K + TG ++K ++ + I E H+N+ G + + + D
Sbjct: 42 KGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYG-AFIKKNPPGMDD 100
Query: 522 -------YLPNGNLSEKIRTKR------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDL 568
+ G++++ I+ + +W A I + RGL LH + H D+
Sbjct: 101 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY--ICREILRGLSHLHQHK---VIHRDI 155
Query: 569 KASNIVFDENMEPHLAEFGF 588
K N++ EN E L +FG
Sbjct: 156 KGQNVLLTENAEVKLVDFGV 175
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 3e-04
Identities = 29/131 (22%), Positives = 58/131 (44%), Gaps = 17/131 (12%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRIGTVR---HKNLIRLLGFCYNRHQAYLLYDYLPN 525
T +VK I + + K S + + ++ H N+++L + Y++ +
Sbjct: 46 TQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTG 105
Query: 526 GNLSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DE 577
G L ++I + D AA +I+ V G+ ++H I H DLK NI+ ++
Sbjct: 106 GELFDEIIKRKRFSEHD-AA--RIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEK 159
Query: 578 NMEPHLAEFGF 588
+ + + +FG
Sbjct: 160 DCDIKIIDFGL 170
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 3e-04
Identities = 31/150 (20%), Positives = 56/150 (37%), Gaps = 34/150 (22%)
Query: 463 CKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVR------------HKNLIRLL--- 507
C V GI V++K++ + + V+ R H N++ L
Sbjct: 39 CAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIF 98
Query: 508 --GFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAK-------YKIVLGVARGLCFLHHD 558
H+ YL+ + + +L++ I +R + Y I+ GL LH
Sbjct: 99 VHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFMYHIL----LGLHVLH-- 151
Query: 559 CYPA-IPHGDLKASNIVFDENMEPHLAEFG 587
A + H DL NI+ +N + + +F
Sbjct: 152 --EAGVVHRDLHPGNILLADNNDITICDFN 179
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 3e-04
Identities = 59/292 (20%), Positives = 100/292 (34%), Gaps = 93/292 (31%)
Query: 471 ITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527
V+VK ++ A+ + E + + N+++LLG C LL++Y+ G+
Sbjct: 78 TMVAVKMLKEEASADMQADFQRE-AALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGD 136
Query: 528 LSEKIRTKRDWAAKY--------------------------KIVLGVARGLCFL--HHDC 559
L+E +R+ I VA G+ +L
Sbjct: 137 LNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-- 194
Query: 560 YPAIPHGDLKASNIVFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWT--ESGE 610
H DL N + ENM +A+FG Y + + P + W ES
Sbjct: 195 ---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIR--WMPPES-- 247
Query: 611 FYNAMKEEMYM---DVYGFGEIIL-EILTNGR-----LTN--------AGSSLQNKPIDG 653
+ Y DV+ +G ++L EI + G + + G+ L P +
Sbjct: 248 ----IFYNRYTTESDVWAYG-VVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILA-CP-EN 300
Query: 654 LLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705
E+YN L+ C P+DRPS ++L +
Sbjct: 301 CPLELYN---------------LMRL----CWSKLPADRPSFCSIHRILQRM 333
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 48/279 (17%), Positives = 87/279 (31%), Gaps = 68/279 (24%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITR-----IGTVRHKNLIRLLGFCYNRHQAYL----- 518
G V+VK++ + + H N+IR Y+
Sbjct: 38 QGRPVAVKRML------IDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91
Query: 519 ---LYDYL-PNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIV 574
L D + E ++ ++++ ++ +A G+ LH I H DLK NI+
Sbjct: 92 NLNLQDLVESKNVSDENLKLQKEYNPI-SLLRQIASGVAHLHSLK---IIHRDLKPQNIL 147
Query: 575 FDENMEPH-------------LAEFGF-KYLTQLADGSFPAKIAWTESGEFY-------- 612
+ +++FG K L SF + SG
Sbjct: 148 VSTSSRFTADQQTGAENLRILISDFGLCKKLDS-GQSSFRTNLN-NPSGTSGWRAPELLE 205
Query: 613 ---NAMKEEMY---MDVYGFGEIILEILTNGRLTNAGSSLQNKPI---DGLLGEMYNENE 663
N + +D++ G + IL+ G+ + I L EM ++
Sbjct: 206 ESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHD 265
Query: 664 VGSSSSLQDEIK--LVLDVALLCTRSTPSDRPSMEEALK 700
+ D I + D P RP+ + L+
Sbjct: 266 RSLIAEATDLISQMIDHD---------PLKRPTAMKVLR 295
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D Length = 170 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 4e-04
Identities = 38/137 (27%), Positives = 56/137 (40%), Gaps = 31/137 (22%)
Query: 269 TKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPES-FADLKNLRLLSLMYN 327
T + L+L+ NQ+ P F R+T L LDL +N+L+ +P F L L LSL N
Sbjct: 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTV-LPAGVFDKLTQLTQLSLNDN 88
Query: 328 EMSGTVPESLV-QLPSLEILFIWNN----------YFSGSLPENLGRNSKLRWVDVSTNN 376
++ ++P L SL +++ NN Y S RW+
Sbjct: 89 QLK-SIPRGAFDNLKSLTHIWLLNNPWDCACSDILYLS-------------RWISQHPGL 134
Query: 377 FNGSIPPDI----CSGG 389
G + D CSG
Sbjct: 135 VFGYLNLDPDSARCSGT 151
|
| >2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 4e-04
Identities = 29/133 (21%), Positives = 55/133 (41%), Gaps = 25/133 (18%)
Query: 469 TGITVSVKKIEWGATR----------IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518
TG V++KKI I ++ E H N+++LL + ++ YL
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKEL-------NHPNIVKLLDVIHTENKLYL 79
Query: 519 LYDYLPNGNLSEKIRTKRDWAAKYKIV----LGVARGLCFLHHDCYPAIPHGDLKASNIV 574
++++L +L + + ++ + +GL F H + H DLK N++
Sbjct: 80 VFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLL 135
Query: 575 FDENMEPHLAEFG 587
+ LA+FG
Sbjct: 136 INTEGAIKLADFG 148
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 4e-04
Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 14/97 (14%)
Query: 500 HKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTK-----RDWAAKYKIVLGVARGLCF 554
H N+++L +++ +L+ + L G L E+I+ K + A+ I+ + +
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETE-AS--YIMRKLVSAVSH 121
Query: 555 LHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGF 588
+H + H DLK N++F ++N+E + +FGF
Sbjct: 122 MHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGF 155
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 41.7 bits (99), Expect = 4e-04
Identities = 28/136 (20%), Positives = 54/136 (39%), Gaps = 22/136 (16%)
Query: 464 KAVLPTGITVSVKKIEWGATR----------IKIVSEFITRIGTVRHKNLIRLLGFCYNR 513
KA G T ++KKI I I+ E +H N+++L + +
Sbjct: 20 KAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKEL-------KHSNIVKLYDVIHTK 72
Query: 514 HQAYLLYDYLPN--GNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKAS 571
+ L++++L L + + +L + G+ + H + H DLK
Sbjct: 73 KRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQ 129
Query: 572 NIVFDENMEPHLAEFG 587
N++ + E +A+FG
Sbjct: 130 NLLINREGELKIADFG 145
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 4e-04
Identities = 27/136 (19%), Positives = 55/136 (40%), Gaps = 22/136 (16%)
Query: 464 KAVLPTGITVSVKKIEWGATR----------IKIVSEFITRIGTVRHKNLIRLLGFCYNR 513
KA G V++K+I A I ++ E H N++ L+ ++
Sbjct: 39 KAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL-------HHPNIVSLIDVIHSE 91
Query: 514 HQAYLLYDYLPN--GNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKAS 571
L+++++ + ++ +T + + + RG+ H I H DLK
Sbjct: 92 RCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQ 148
Query: 572 NIVFDENMEPHLAEFG 587
N++ + + LA+FG
Sbjct: 149 NLLINSDGALKLADFG 164
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} Length = 174 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 4e-04
Identities = 31/135 (22%), Positives = 51/135 (37%), Gaps = 24/135 (17%)
Query: 269 TKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPES-FADLKNLRLLSLMYN 327
T + L+L NQ+ P F + L+ L + N+L+ IP F L L L L N
Sbjct: 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTA-IPTGVFDKLTQLTQLDLNDN 91
Query: 328 EMSGTVPESLV-QLPSLEILFIWNN----------YFSGSLPENLGRNSKLRWVDVSTNN 376
+ ++P L SL ++++NN Y + ++ V +
Sbjct: 92 HLK-SIPRGAFDNLKSLTHIYLYNNPWDCECRDIMYLRNWVADHTSI--------VMRWD 142
Query: 377 FNGSIPPD--ICSGG 389
PD C+G
Sbjct: 143 GKAVNDPDSAKCAGT 157
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 4e-04
Identities = 22/129 (17%), Positives = 54/129 (41%), Gaps = 12/129 (9%)
Query: 468 PTGITVSVKKIEW---GATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524
P+G ++VK+I + +++ + + TV + G + ++ + +
Sbjct: 30 PSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM- 88
Query: 525 NGNLSEKIRTKRDWAAKY------KIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN 578
+ +L + + D KI + + + L LH ++ H D+K SN++ +
Sbjct: 89 DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINAL 146
Query: 579 MEPHLAEFG 587
+ + +FG
Sbjct: 147 GQVKMCDFG 155
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 5e-04
Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 35/146 (23%)
Query: 463 CKAVL-PTGITVSVKKIEWGATR----IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA- 516
+A L +G V++KK+ ++I+ + H N++RL F Y+ +
Sbjct: 71 YQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-------DHCNIVRLRYFFYSSGEKK 123
Query: 517 -----YLLYDYLPNGNLSEKIRTKRDWAAKYKIVLG--------VARGLCFLH-HDCYPA 562
L+ DY+P + R AK + + + R L ++H
Sbjct: 124 DEVYLNLVLDYVPE-TVYRVARHY--SRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---- 176
Query: 563 IPHGDLKASNIVFDENMEP-HLAEFG 587
I H D+K N++ D + L +FG
Sbjct: 177 ICHRDIKPQNLLLDPDTAVLKLCDFG 202
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 5e-04
Identities = 32/143 (22%), Positives = 54/143 (37%), Gaps = 28/143 (19%)
Query: 462 GCKAV-LPTGITVSVKKI------EWGATR----IKIVSEFITRIGTVRHKNLIRLL--- 507
C A V++KK+ + A R + ++ HKN+I LL
Sbjct: 41 VCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-------NHKNIIGLLNVF 93
Query: 508 ---GFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIP 564
Y++ + + NL + I+ + D ++ + G+ LH I
Sbjct: 94 TPQKSLEEFQDVYIVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGII 149
Query: 565 HGDLKASNIVFDENMEPHLAEFG 587
H DLK SNIV + + +FG
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFG 172
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 6e-04
Identities = 33/172 (19%), Positives = 66/172 (38%), Gaps = 43/172 (25%)
Query: 463 CKAV-LPTGITVSVKKI----EWGATR----IKIVSEFITRIGTVRHKNLIRLL------ 507
AV V++KKI IKI+ H N++++
Sbjct: 28 FSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRL-------DHDNIVKVFEILGPS 80
Query: 508 --------GFCYNRHQAYLLYDYLPNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHH 557
G + Y++ +Y+ +L+ + + A+ + + RGL ++H
Sbjct: 81 GSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQGPLLEEHARL-FMYQLLRGLKYIH- 137
Query: 558 DCYPA-IPHGDLKASNIVFD-ENMEPHLAEFGFKYLTQLADGSFPAKIAWTE 607
A + H DLK +N+ + E++ + +FG L ++ D + K +E
Sbjct: 138 ---SANVLHRDLKPANLFINTEDLVLKIGDFG---LARIMDPHYSHKGHLSE 183
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 6e-04
Identities = 38/177 (21%), Positives = 75/177 (42%), Gaps = 36/177 (20%)
Query: 435 PQFTANDVLRS-FNSTECEEAARPQ----SAAGCKAV-LPTGITVSVKKI------EWGA 482
F +V ++ + +P A C AV TG V++KK+ E A
Sbjct: 9 SGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFA 68
Query: 483 TR----IKIVSEFITRIGTVRHKNLIRLL------GFCYNRHQAYLLYDYLPNGNLSEKI 532
R ++++ RH+N+I LL + YL+ ++ +L + +
Sbjct: 69 KRAYRELRLLKHM-------RHENVIGLLDVFTPDETLDDFTDFYLVMPFMGT-DLGKLM 120
Query: 533 RTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG 587
+ ++ + ++ +V + +GL ++H I H DLK N+ +E+ E + +FG
Sbjct: 121 KHEKLGEDRIQF-LVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFG 173
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 41.5 bits (97), Expect = 7e-04
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 9/106 (8%)
Query: 471 ITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFC-YNRHQAYLLYDYLPNG 526
TV+VK ++ GAT ++SE I H N++ LLG C ++ ++ G
Sbjct: 53 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 112
Query: 527 NLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASN 572
NLS +R+KR+ YK +G F Y DLK
Sbjct: 113 NLSTYLRSKRNEFVPYKT-----KGARFRQGKDYVGAIPVDLKRRL 153
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 8e-04
Identities = 31/136 (22%), Positives = 65/136 (47%), Gaps = 28/136 (20%)
Query: 469 TGITVSVKKI----EWG----ATR-IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519
TG+ V++K++ E G A R I ++ E +H+N++RL + ++ L+
Sbjct: 29 TGVYVALKEVKLDSEEGTPSTAIREISLMKEL-------KHENIVRLYDVIHTENKLTLV 81
Query: 520 YDYLPNGNLSEKIRTKRDWAAKYKIVLGVA--------RGLCFLHHDCYPAIPHGDLKAS 571
++++ N +L + + ++ + L + +GL F H + I H DLK
Sbjct: 82 FEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQ 137
Query: 572 NIVFDENMEPHLAEFG 587
N++ ++ + L +FG
Sbjct: 138 NLLINKRGQLKLGDFG 153
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 710 | |||
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 100.0 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 100.0 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 100.0 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 100.0 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 100.0 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 100.0 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 100.0 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 100.0 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 100.0 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 100.0 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 100.0 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.98 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.98 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.98 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.97 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.97 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.97 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.97 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.97 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.97 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.97 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.97 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.97 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.96 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.96 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.96 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.96 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.96 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.96 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.96 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.96 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.95 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.95 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.95 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.95 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.95 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.94 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.94 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.94 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.94 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.93 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.93 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.92 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.92 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.91 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.91 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.91 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.91 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.91 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.9 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.9 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.9 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.9 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.9 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.9 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.89 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.89 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.89 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 99.89 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.88 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.88 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 99.88 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.87 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.87 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.87 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.86 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.85 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.85 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.85 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.85 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.84 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.84 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.82 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 99.81 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.8 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.79 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.79 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.79 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 99.79 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.78 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.78 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.78 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.78 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.78 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.78 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.77 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.77 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.77 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.77 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.74 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.74 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.73 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.72 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.71 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.71 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.7 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.66 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.65 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.65 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.65 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.63 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.63 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.63 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.62 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.61 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.61 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.59 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.52 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.51 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.5 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.5 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.5 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.48 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 99.46 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 99.43 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.42 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.39 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.31 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.29 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.22 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.13 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.11 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.1 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 99.09 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 99.01 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 98.99 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.92 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 98.86 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.81 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.79 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.72 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 98.64 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.46 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.43 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.38 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 98.32 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.25 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.24 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 98.19 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.18 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.11 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 97.89 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 97.86 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 97.63 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 97.54 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 97.5 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.44 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.41 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.15 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.13 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 96.54 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 96.48 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 96.47 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 96.4 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 96.35 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 96.24 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 96.17 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 96.11 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 96.03 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 95.92 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 95.92 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 95.88 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 95.06 | |
| 3mes_A | 424 | Choline kinase; malaria, structural genomics, stru | 91.22 | |
| 3f2s_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 90.45 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 86.08 | |
| 4ann_A | 215 | ESSB; membrane protein, membrane secretion, ESS ty | 84.48 | |
| 4ano_A | 219 | ESSB; membrane protein, membrane secretion, ESS ty | 81.68 |
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-51 Score=425.21 Aligned_cols=245 Identities=18% Similarity=0.222 Sum_probs=196.6
Q ss_pred hhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccch-hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
..+.||+|+||.||+|.. .+|..||||+++.... ..+.|.+|+++|++++|||||+++|+|.+++..+|||||
T Consensus 17 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey 96 (299)
T 4asz_A 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEY 96 (299)
T ss_dssp EEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEc
Confidence 557899999999999985 3578999999986433 467899999999999999999999999999999999999
Q ss_pred cCCCChhhhhhc---------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccC
Q 005177 523 LPNGNLSEKIRT---------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG 587 (710)
Q Consensus 523 ~~~gsL~~~l~~---------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG 587 (710)
|++|||.++|+. .++|.++.+|+.|||+||+|||+. +||||||||+|||+++++.+||+|||
T Consensus 97 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki~DFG 173 (299)
T 4asz_A 97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFG 173 (299)
T ss_dssp CTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCS
T ss_pred CCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEECCcc
Confidence 999999999964 478999999999999999999998 99999999999999999999999999
Q ss_pred ccccccccCC----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccccccc
Q 005177 588 FKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNEN 662 (710)
Q Consensus 588 la~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 662 (710)
+|+....... ....++..|++||+.....++.++|||||||++|||+| |+.||.+.... +....+....
T Consensus 174 la~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~------~~~~~i~~~~ 247 (299)
T 4asz_A 174 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN------EVIECITQGR 247 (299)
T ss_dssp CHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH------HHHHHHHHTC
T ss_pred cceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH------HHHHHHHcCC
Confidence 9986543221 11224445778899988999999999999999999999 88888643211 1111121111
Q ss_pred ccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 663 EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 663 ~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
....+.. ...++.+++.+||+.||++||||+||++.|+++.
T Consensus 248 ~~~~p~~---~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~ 288 (299)
T 4asz_A 248 VLQRPRT---CPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA 288 (299)
T ss_dssp CCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCcc---chHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 1111111 2345778999999999999999999999998764
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-51 Score=424.92 Aligned_cols=245 Identities=17% Similarity=0.202 Sum_probs=196.3
Q ss_pred hhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
..+.||+|+||.||+|.+ .+++.||||+++... ...+.|.+|++++++++|||||+++|+|.+++..+||||
T Consensus 30 ~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E 109 (308)
T 4gt4_A 30 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFS 109 (308)
T ss_dssp EEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEE
Confidence 346799999999999985 357899999997542 236789999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEE
Q 005177 522 YLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 583 (710)
Q Consensus 522 y~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl 583 (710)
||++|||.++|+. .++|.++.+|+.|||+||+|||+. +||||||||+|||+++++.+||
T Consensus 110 y~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~~Ki 186 (308)
T 4gt4_A 110 YCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKI 186 (308)
T ss_dssp CCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEE
T ss_pred cCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCCEEE
Confidence 9999999999953 368999999999999999999998 9999999999999999999999
Q ss_pred cccCccccccccCC----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccc
Q 005177 584 AEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEM 658 (710)
Q Consensus 584 ~DfGla~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~ 658 (710)
+|||+++....... ....++..|.+||+.....++.++|||||||++|||+| |+.||.+.... + ....+
T Consensus 187 ~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~-~-----~~~~i 260 (308)
T 4gt4_A 187 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ-D-----VVEMI 260 (308)
T ss_dssp CCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH-H-----HHHHH
T ss_pred CCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH-H-----HHHHH
Confidence 99999986543221 11223445778898888899999999999999999999 78888643211 1 11111
Q ss_pred ccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 659 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
.+....+.+. +....+.+++.+||+.||++||||.||+++|+.+.
T Consensus 261 ~~~~~~~~p~---~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 261 RNRQVLPCPD---DCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp HTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred HcCCCCCCcc---cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 1111111122 22345778999999999999999999999998764
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-50 Score=476.54 Aligned_cols=372 Identities=31% Similarity=0.435 Sum_probs=231.3
Q ss_pred hccCCChhhHHHHHHHHhhCCCCCCCCCCCCCCCCCCCCCCCCCceeeeeeeCCCCCcEEEEEcCCCCCccc---CCc--
Q 005177 19 PAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLSMKGLSGA---LPG-- 93 (710)
Q Consensus 19 ~~~~~~~~~~~all~~k~~~~~~~~~l~~w~~~~~~~~~~~~~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~---~~~-- 93 (710)
+++.+.++|++||++||+++.||. ++++|+. +++||+|.||+|+ +++|+.++|++.++.|. +|+
T Consensus 5 ~~~~~~~~~~~all~~k~~~~~~~-~l~~W~~--------~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l 73 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLPDKN-LLPDWSS--------NKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSL 73 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCSCTT-SSTTCCT--------TSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHT
T ss_pred ccccCCHHHHHHHHHHHhhCCCcc-cccCCCC--------CCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhH
Confidence 344556789999999999999998 9999973 5689999999998 58999999999999987 554
Q ss_pred ---------------------chhhhcCCCCcEEECCCCcCcccCCc--cccCCCCCcEEECcCCCCCCCCChhh-cCCC
Q 005177 94 ---------------------KPLRIFFNELVDLNLSHNSFSGQFPV--EIFNLTSLISLDISRNNFSGHFPGGI-QSLR 149 (710)
Q Consensus 94 ---------------------~~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~l-~~L~ 149 (710)
.+.. +++|++|||++|.++|.+|. .++++++|++|+|++|.+++.+|..+ .+++
T Consensus 74 ~~L~~L~~l~~~~~~~~~l~~~~~~--l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~ 151 (768)
T 3rgz_A 74 LSLTGLESLFLSNSHINGSVSGFKC--SASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLN 151 (768)
T ss_dssp TTCTTCCEEECTTSCEEECCCCCCC--CTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCT
T ss_pred hccCcccccCCcCCCcCCCchhhcc--CCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCC
Confidence 3444 78899999999999998888 89999999999999999988888766 7788
Q ss_pred CCCEEECCCCCCCcCCchh---ccC----------------------CCCCCEEEccCCCCCCCCCcccCCCCCCCeEEe
Q 005177 150 NLLVLDAFSNSFSGSVPAE---ISQ----------------------LEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHL 204 (710)
Q Consensus 150 ~L~~L~L~~N~l~~~~p~~---~~~----------------------L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 204 (710)
+|++|||++|.+++..|.. +.+ +++|++|+|++|++++.+|. ++++++|++|++
T Consensus 152 ~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~L 230 (768)
T 3rgz_A 152 SLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDI 230 (768)
T ss_dssp TCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEEC
T ss_pred CCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEEC
Confidence 8888888888887766655 444 44455555555555554554 555666666666
Q ss_pred cCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCC-CCCcEEEccccccCC
Q 005177 205 AGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNL-TKLESLFLFRNQLAG 283 (710)
Q Consensus 205 ~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l-~~L~~L~L~~n~l~~ 283 (710)
++|.+++.+|..++.+++|++|++++|.+.+.+|.. .+++|++|++++|+++|.+|..+... ++|++|++++|++++
T Consensus 231 s~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~ 308 (768)
T 3rgz_A 231 SGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYG 308 (768)
T ss_dssp CSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEE
T ss_pred cCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCC
Confidence 666666555555555555555555555555544433 44444444444454444455444432 555555555555555
Q ss_pred CCCccccCCCCCCEEEccCCCCCCCCCcc-ccCCCCCCEEEcccccCcccCCcccCCCC-CCcEEeccCCCCCCCCCccc
Q 005177 284 QVPWEFSRVTTLKSLDLSDNRLSGPIPES-FADLKNLRLLSLMYNEMSGTVPESLVQLP-SLEILFIWNNYFSGSLPENL 361 (710)
Q Consensus 284 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~-~L~~L~L~~N~l~g~~p~~l 361 (710)
.+|..+.++++|++|++++|++.|.+|.. +..+++|++|++++|++++.+|..+..++ +|++|++++|.++|.+|..+
T Consensus 309 ~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~ 388 (768)
T 3rgz_A 309 AVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNL 388 (768)
T ss_dssp CCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTT
T ss_pred ccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhh
Confidence 55555555555555555555555444443 44555555555555555444444444433 44444444444444333333
Q ss_pred CC--CCCCcEEECCCCcCCccCcccccCCCceeeEecccCCcccchh
Q 005177 362 GR--NSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 362 ~~--~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~l~g~i~ 406 (710)
.. +++|+.|++++|.++|.+|..++.++.|+.|++++|+++|.+|
T Consensus 389 ~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 435 (768)
T 3rgz_A 389 CQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIP 435 (768)
T ss_dssp TCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCC
T ss_pred hhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCccc
Confidence 33 3344444444444444444444444444444444444444433
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-51 Score=429.49 Aligned_cols=246 Identities=17% Similarity=0.194 Sum_probs=193.6
Q ss_pred hhhhhcCCCCCccEEEEcC------CCcEEEEEEeeccch-hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVLP------TGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~------~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
..++||+|+||.||+|+.. +|+.||||+++.... ..+.|.+|+++|++++|||||+++|+|.+++..||||||
T Consensus 45 l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey 124 (329)
T 4aoj_A 45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEY 124 (329)
T ss_dssp EEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 5578999999999999853 588999999986433 467899999999999999999999999999999999999
Q ss_pred cCCCChhhhhhc-----------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcc
Q 005177 523 LPNGNLSEKIRT-----------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 585 (710)
Q Consensus 523 ~~~gsL~~~l~~-----------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~D 585 (710)
|++|+|.++++. .++|.++.+|+.|||+||+|||+. +||||||||+|||+++++.+||+|
T Consensus 125 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~Ki~D 201 (329)
T 4aoj_A 125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGD 201 (329)
T ss_dssp CTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECC
T ss_pred CCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcEEEcc
Confidence 999999999864 368999999999999999999998 999999999999999999999999
Q ss_pred cCccccccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccccc
Q 005177 586 FGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYN 660 (710)
Q Consensus 586 fGla~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 660 (710)
||+++........ ...++..|++||+.....++.++|||||||++|||+| |+.||.+....+ ....+..
T Consensus 202 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~------~~~~i~~ 275 (329)
T 4aoj_A 202 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE------AIDCITQ 275 (329)
T ss_dssp CC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH------HHHHHHH
T ss_pred cccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH------HHHHHHc
Confidence 9999865432211 1223445778899988999999999999999999999 888886433211 1111111
Q ss_pred ccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 661 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
......+.. ...++.+++.+||+.||++||||+||+++|+.+.+
T Consensus 276 g~~~~~p~~---~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 276 GRELERPRA---CPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp TCCCCCCTT---CCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCCCCccc---ccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 111111121 23457789999999999999999999999988754
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-50 Score=420.56 Aligned_cols=247 Identities=17% Similarity=0.228 Sum_probs=191.5
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.||+|+||.||+|++.. .||||+++.. ....+.|.+|++++++++|||||+++|+|.+ +..+||||||++|
T Consensus 40 l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~gG 116 (307)
T 3omv_A 40 LSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGS 116 (307)
T ss_dssp EEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSC
T ss_pred EeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCCC
Confidence 56789999999999998743 5999999753 2346789999999999999999999999864 5789999999999
Q ss_pred Chhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC----CC
Q 005177 527 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG----SF 599 (710)
Q Consensus 527 sL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~----~~ 599 (710)
+|.++|+. .++|.++.+|+.|||+||+|||+. +||||||||+|||+++++.+||+|||+|+....... ..
T Consensus 117 sL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~ 193 (307)
T 3omv_A 117 SLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQ 193 (307)
T ss_dssp BHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC------------
T ss_pred CHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecc
Confidence 99999964 579999999999999999999998 999999999999999999999999999987543211 11
Q ss_pred cccccccCchhhhhc---cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHH
Q 005177 600 PAKIAWTESGEFYNA---MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 676 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~---~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (710)
..++..|.+||++.. .+++.++|||||||++|||+||+.||.+...... ...........+. . .....+....
T Consensus 194 ~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~-~~~~~~~~~~~p~-~--~~~~~~~~~~ 269 (307)
T 3omv_A 194 PTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-IIFMVGRGYASPD-L--SKLYKNCPKA 269 (307)
T ss_dssp CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHHHHTTCCCCC-S--TTSCTTSCHH
T ss_pred cccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH-HHHHHhcCCCCCC-c--ccccccchHH
Confidence 224555778888753 3589999999999999999999999975432111 1100111111111 0 1111122346
Q ss_pred HHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 677 VLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 677 ~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
+.+++.+||+.||++||||.||+++|+.++
T Consensus 270 l~~li~~cl~~dP~~RPs~~ei~~~Le~l~ 299 (307)
T 3omv_A 270 MKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp HHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 778999999999999999999999998775
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-50 Score=420.40 Aligned_cols=254 Identities=20% Similarity=0.241 Sum_probs=195.5
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCC----ceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----QAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----~~~lv~Ey~~~ 525 (710)
..+.||+|+||.||+|++ +|+.||||+++........+..|+..+.+++|||||+++|+|.+++ ..|||||||++
T Consensus 7 L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~ 85 (303)
T 3hmm_A 7 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH 85 (303)
T ss_dssp EEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred EEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCC
Confidence 457899999999999997 7999999999865544444556777788999999999999998754 57999999999
Q ss_pred CChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCC-----CCCceecCCCCCCeEecCCCceEEcccCccccccccCCC-
Q 005177 526 GNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDC-----YPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 598 (710)
Q Consensus 526 gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~-----~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~- 598 (710)
|||.++++. .++|..+.+|+.|+|+||+|||+++ .++||||||||+|||+|.++.+||+|||+|+........
T Consensus 86 gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 165 (303)
T 3hmm_A 86 GSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI 165 (303)
T ss_dssp CBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEE
T ss_pred CcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCce
Confidence 999999976 6799999999999999999999863 569999999999999999999999999999876432211
Q ss_pred -----CcccccccCchhhhhcc------CCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc----------cc---
Q 005177 599 -----FPAKIAWTESGEFYNAM------KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID----------GL--- 654 (710)
Q Consensus 599 -----~~~~~~~~~~~e~~~~~------~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~----------~~--- 654 (710)
...++.+|++||++.+. +++.++|||||||++|||+||+.|+......+ .+.. ..
T Consensus 166 ~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~ 244 (303)
T 3hmm_A 166 DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ-LPYYDLVPSDPSVEEMRKV 244 (303)
T ss_dssp SCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCC-CTTTTTSCSSCCHHHHHHH
T ss_pred eeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCcccccc-ccchhcccccchHHHHHHH
Confidence 11245667888887543 46788999999999999999988765322111 1110 00
Q ss_pred -ccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 655 -LGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 655 -~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
..+..++. .+......+....+.+++.+||+.||++||||.||+++|+++.
T Consensus 245 ~~~~~~rp~-~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~ 296 (303)
T 3hmm_A 245 VCEQKLRPN-IPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp HTTSCCCCC-CCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhcccCCCC-CCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence 01111111 1101111234567789999999999999999999999998875
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-48 Score=411.52 Aligned_cols=242 Identities=15% Similarity=0.239 Sum_probs=199.0
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
..+.||+|+||.||+|.. .+|+.||||+++.... ..+.+.+|+++|++++|||||++++++.+++..|||||||++|+
T Consensus 78 ~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~ 157 (346)
T 4fih_A 78 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 157 (346)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEE
T ss_pred EeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCc
Confidence 677899999999999985 6899999999976432 35668899999999999999999999999999999999999999
Q ss_pred hhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Cccccc
Q 005177 528 LSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAKIA 604 (710)
Q Consensus 528 L~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~~~~ 604 (710)
|.+++.. .+++.+...|+.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+........ ...+++
T Consensus 158 L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp 234 (346)
T 4fih_A 158 LTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTP 234 (346)
T ss_dssp HHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCG
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccccCc
Confidence 9999965 678999999999999999999999 9999999999999999999999999999876433221 223667
Q ss_pred ccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhc
Q 005177 605 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 684 (710)
Q Consensus 605 ~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 684 (710)
+|++||++....++.++||||+||++|||+||+.||.+..... .+..+.+.. ......+......+.+++.+|
T Consensus 235 ~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~------~~~~i~~~~-~~~~~~~~~~s~~~~dli~~~ 307 (346)
T 4fih_A 235 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK------AMKMIRDNL-PPRLKNLHKVSPSLKGFLDRL 307 (346)
T ss_dssp GGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHSS-CCCCSCGGGSCHHHHHHHHHH
T ss_pred CcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH------HHHHHHcCC-CCCCCccccCCHHHHHHHHHH
Confidence 7889999988899999999999999999999999997543211 111111111 111112223345677899999
Q ss_pred CCCCCCCCCCHHHHHHH
Q 005177 685 TRSTPSDRPSMEEALKL 701 (710)
Q Consensus 685 l~~~p~~RPs~~evl~~ 701 (710)
|+.||++|||++|++++
T Consensus 308 L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 308 LVRDPAQRATAAELLKH 324 (346)
T ss_dssp SCSSTTTSCCHHHHTTC
T ss_pred cCCChhHCcCHHHHhcC
Confidence 99999999999999864
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-48 Score=401.56 Aligned_cols=242 Identities=19% Similarity=0.214 Sum_probs=189.7
Q ss_pred hhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEc----CCceeEEEee
Q 005177 451 CEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYN----RHQAYLLYDY 522 (710)
Q Consensus 451 ~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~~~lv~Ey 522 (710)
.++||+|+||.||+|.. .+|..||||++.... ...+.|.+|++++++++|||||+++++|.+ ++..||||||
T Consensus 31 ~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy 110 (290)
T 3fpq_A 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL 110 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred eeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeC
Confidence 45799999999999985 679999999997542 235678999999999999999999999865 3468999999
Q ss_pred cCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC-CCceEEcccCccccccccCCCC
Q 005177 523 LPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-NMEPHLAEFGFKYLTQLADGSF 599 (710)
Q Consensus 523 ~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~-~~~~kl~DfGla~~~~~~~~~~ 599 (710)
|++|+|.++++. .+++.....|+.||++||+|||++ .++||||||||+|||++. ++.+||+|||+|+.........
T Consensus 111 ~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~~~~ 189 (290)
T 3fpq_A 111 MTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA 189 (290)
T ss_dssp CCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEE
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCccCC
Confidence 999999999975 678999999999999999999987 234999999999999984 7999999999998654322222
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 679 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (710)
..++++|++||+... +++.++|||||||++|||+||+.||.+...... ....+.... .+ ........+++.+
T Consensus 190 ~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~-----~~~~i~~~~-~~-~~~~~~~~~~~~~ 261 (290)
T 3fpq_A 190 VIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ-----IYRRVTSGV-KP-ASFDKVAIPEVKE 261 (290)
T ss_dssp SCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH-----HHHHHTTTC-CC-GGGGGCCCHHHHH
T ss_pred cccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH-----HHHHHHcCC-CC-CCCCccCCHHHHH
Confidence 235667888898764 699999999999999999999999975432211 011111111 00 0001112245778
Q ss_pred HHhhcCCCCCCCCCCHHHHHHH
Q 005177 680 VALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 680 l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
++.+||+.||++|||++|++++
T Consensus 262 li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 262 IIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp HHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHccCChhHCcCHHHHhcC
Confidence 9999999999999999999763
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-48 Score=445.22 Aligned_cols=363 Identities=21% Similarity=0.317 Sum_probs=319.5
Q ss_pred ChhhHHHHHHHHhhCCCCCC--------CCCCCCCCCCCCCCCCCCCcee---eeeeeCCCCCcEEEEEcCCCCCcccCC
Q 005177 24 NDPYSEALLSLKSELVDDFN--------SLHDWFVPPGVNPAGKIYACSW---SGVKCNKNNTIVVGINLSMKGLSGALP 92 (710)
Q Consensus 24 ~~~~~~all~~k~~~~~~~~--------~l~~w~~~~~~~~~~~~~~C~w---~gv~C~~~~~~v~~l~l~~~~l~g~~~ 92 (710)
...|++||.+++.++.++.. ...+|+. +++||.| .||+|+. .++|+.++|+++++.|.+|
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~--------~~~~c~w~~~~GV~C~~-~~~V~~L~L~~~~l~g~lp 98 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNF--------NKELDMWGAQPGVSLNS-NGRVTGLSLEGFGASGRVP 98 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCC--------SSCGGGTTCCTTEEECT-TCCEEEEECTTSCCEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC--------CCCcccccCCCCeEEcC-CCCEEEEEecCcccCCcCC
Confidence 44699999999999965532 2335653 5689999 9999987 4899999999999999999
Q ss_pred cchhhhcCCCCcEEECCCCc------------------------------------------------------------
Q 005177 93 GKPLRIFFNELVDLNLSHNS------------------------------------------------------------ 112 (710)
Q Consensus 93 ~~~~~~~l~~L~~L~Ls~N~------------------------------------------------------------ 112 (710)
+.++. +++|++|||++|.
T Consensus 99 ~~l~~--L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~ 176 (636)
T 4eco_A 99 DAIGQ--LTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIK 176 (636)
T ss_dssp GGGGG--CTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCC
T ss_pred hHHhc--CccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccc
Confidence 99998 9999999999984
Q ss_pred ------------------CcccCCccccCCCCCcEEECcCCCCCCC-----------------CChhhc--CCCCCCEEE
Q 005177 113 ------------------FSGQFPVEIFNLTSLISLDISRNNFSGH-----------------FPGGIQ--SLRNLLVLD 155 (710)
Q Consensus 113 ------------------l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-----------------~p~~l~--~L~~L~~L~ 155 (710)
++| +|.+++++++|++|+|++|.++|. +|..++ ++++|++|+
T Consensus 177 ~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~ 255 (636)
T 4eco_A 177 KSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVE 255 (636)
T ss_dssp CCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEE
T ss_pred cccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEE
Confidence 445 889999999999999999999996 999999 999999999
Q ss_pred CCCCCCCcCCchhccCCCCCCEEEccCCC-CCC-CCCcccCCC------CCCCeEEecCCcCCCCCcc--cccccccccc
Q 005177 156 AFSNSFSGSVPAEISQLEHLKVLNLAGSY-FSG-PIPSQFGSF------KSLEFLHLAGNLLNDQIPA--ELGMLKTVTH 225 (710)
Q Consensus 156 L~~N~l~~~~p~~~~~L~~L~~L~L~~n~-l~~-~~p~~~~~l------~~L~~L~L~~N~l~~~~p~--~l~~l~~L~~ 225 (710)
|++|.+.+.+|..++++++|++|+|++|+ ++| .+|..++++ ++|++|++++|.++ .+|. .++.+++|++
T Consensus 256 L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~ 334 (636)
T 4eco_A 256 VYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGM 334 (636)
T ss_dssp EECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCE
T ss_pred ecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCE
Confidence 99999999999999999999999999998 998 899988876 99999999999999 8998 8999999999
Q ss_pred cccccccccccCCccccCCCccchhccccccCCccCchhccCCCC-CcEEEccccccCCCCCccccCCC--CCCEEEccC
Q 005177 226 MEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTK-LESLFLFRNQLAGQVPWEFSRVT--TLKSLDLSD 302 (710)
Q Consensus 226 L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~-L~~L~L~~n~l~~~~p~~~~~l~--~L~~L~Ls~ 302 (710)
|++++|.++|.+| .++++++|++|++++|+++ .+|..+..+++ |+.|++++|.++ .+|..+..++ +|+.|++++
T Consensus 335 L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~ 411 (636)
T 4eco_A 335 LECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSY 411 (636)
T ss_dssp EECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCS
T ss_pred EeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcC
Confidence 9999999999999 8999999999999999999 88888999999 999999999998 7888777655 899999999
Q ss_pred CCCCCCCCcccc-------CCCCCCEEEcccccCcccCCcc-cCCCCCCcEEeccCCCCCCCCCcccCCC--------CC
Q 005177 303 NRLSGPIPESFA-------DLKNLRLLSLMYNEMSGTVPES-LVQLPSLEILFIWNNYFSGSLPENLGRN--------SK 366 (710)
Q Consensus 303 N~l~~~~p~~~~-------~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~L~L~~N~l~g~~p~~l~~~--------~~ 366 (710)
|++++.+|..+. .+++|+.|+|++|++++ +|.. +..+++|++|+|++|.++ .+|...... ++
T Consensus 412 N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~-lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~ 489 (636)
T 4eco_A 412 NEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISK-FPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYL 489 (636)
T ss_dssp SCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCS-CCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGG
T ss_pred CcCCCcchhhhcccccccccCCCCCEEECcCCccCc-CCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCC
Confidence 999999998888 78899999999999984 5544 556899999999999998 666654332 28
Q ss_pred CcEEECCCCcCCccCccccc--CCCceeeEecccCCcccchh
Q 005177 367 LRWVDVSTNNFNGSIPPDIC--SGGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 367 L~~L~ls~N~l~g~ip~~~~--~~~~L~~l~l~~N~l~g~i~ 406 (710)
|+.|++++|+++ .+|..+. .+++|+.|++++|++++ +|
T Consensus 490 L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip 529 (636)
T 4eco_A 490 LTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FP 529 (636)
T ss_dssp CCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CC
T ss_pred ccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cC
Confidence 999999999998 7888887 88899999999999988 55
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-48 Score=406.39 Aligned_cols=241 Identities=17% Similarity=0.138 Sum_probs=193.4
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCCh
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
..+.||+|+||.||+|+. .+|+.||||+++.... ..+|++++++++|||||++++++.+++..|||||||++|+|
T Consensus 62 ~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 137 (336)
T 4g3f_A 62 HQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL 137 (336)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred eCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcH
Confidence 566799999999999985 6799999999985432 34699999999999999999999999999999999999999
Q ss_pred hhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC-ceEEcccCccccccccCC-------C
Q 005177 529 SEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM-EPHLAEFGFKYLTQLADG-------S 598 (710)
Q Consensus 529 ~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~-~~kl~DfGla~~~~~~~~-------~ 598 (710)
.++++. .+++.+...|+.||+.||+|||+. +||||||||+|||++.++ .+||+|||+|+....... .
T Consensus 138 ~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~ 214 (336)
T 4g3f_A 138 GQLIKQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 214 (336)
T ss_dssp HHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC------------C
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCC
Confidence 999975 678999999999999999999998 999999999999999987 699999999987643211 1
Q ss_pred CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHH
Q 005177 599 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 678 (710)
Q Consensus 599 ~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (710)
...++++|++||+..+..++.++|||||||++|||+||+.||.+..... ....+.... ......+......+.
T Consensus 215 ~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~------~~~~i~~~~-~~~~~~~~~~s~~~~ 287 (336)
T 4g3f_A 215 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP------LCLKIASEP-PPIREIPPSCAPLTA 287 (336)
T ss_dssp CCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC------CHHHHHHSC-CGGGGSCTTSCHHHH
T ss_pred ccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH------HHHHHHcCC-CCchhcCccCCHHHH
Confidence 1235667889999988899999999999999999999999997543211 111111111 000001112234567
Q ss_pred HHHhhcCCCCCCCCCCHHHHHHHHhc
Q 005177 679 DVALLCTRSTPSDRPSMEEALKLLSG 704 (710)
Q Consensus 679 ~l~~~Cl~~~p~~RPs~~evl~~L~~ 704 (710)
+++.+||+.||++|||+.|+++.|..
T Consensus 288 ~li~~~L~~dP~~R~sa~el~~~l~~ 313 (336)
T 4g3f_A 288 QAIQEGLRKEPVHRASAMELRRKVGK 313 (336)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHccCCHhHCcCHHHHHHHHHH
Confidence 88999999999999999999988754
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-48 Score=410.13 Aligned_cols=242 Identities=16% Similarity=0.192 Sum_probs=191.5
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 520 (710)
+|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+++..||||
T Consensus 25 ~Y~--~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 25 KYV--RLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CEE--EEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceE--EeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 454 788999999999999985 689999999998642 23567899999999999999999999999999999999
Q ss_pred eecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC
Q 005177 521 DYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 521 Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 596 (710)
|||++|+|.+++.. ..++.+...|+.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+......
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence 99999999999964 247788899999999999999998 99999999999999999999999999998764321
Q ss_pred C--CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 597 G--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 597 ~--~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
. ....++++|.+||++.+..++.++||||+||++|||+||+.||.+..... .+.++........+. ...
T Consensus 180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~------~~~~i~~~~~~~~~~---~~s 250 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN------LVLKIISGSFPPVSL---HYS 250 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHTCCCCCCT---TSC
T ss_pred ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH------HHHHHHcCCCCCCCc---cCC
Confidence 1 11225667889999998899999999999999999999999997543211 111222211111111 123
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
..+.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 251 YDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 45778999999999999999999976
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-47 Score=443.32 Aligned_cols=362 Identities=21% Similarity=0.291 Sum_probs=302.4
Q ss_pred CChhhHHHHHHHHhhCCCCCCCCCCCCCCCCCCCCCCCCC--cee------------eeeeeCCCCCcEEEEEcCCCCCc
Q 005177 23 ANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYA--CSW------------SGVKCNKNNTIVVGINLSMKGLS 88 (710)
Q Consensus 23 ~~~~~~~all~~k~~~~~~~~~l~~w~~~~~~~~~~~~~~--C~w------------~gv~C~~~~~~v~~l~l~~~~l~ 88 (710)
+..+|++||++||+++.+| +|+...++ + ..+| |.| .||+|+. .++|+.++|+++++.
T Consensus 266 ~~~~d~~ALl~~k~~l~~~-----~W~~~~~~-~--~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~ 336 (876)
T 4ecn_A 266 EYIKDYKALKAIWEALDGK-----NWRYYSGT-I--NNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAK 336 (876)
T ss_dssp HHHHHHHHHHHHHHHTTGG-----GCCCCCSS-C--SSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCE
T ss_pred cchHHHHHHHHHHHHcCCC-----CCCcCCCc-c--cccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCC
Confidence 3457999999999999877 89753110 1 1244 999 9999997 689999999999999
Q ss_pred ccCCcchhhhcCCCCcEEEC-CCCcCccc---------------------------------------------------
Q 005177 89 GALPGKPLRIFFNELVDLNL-SHNSFSGQ--------------------------------------------------- 116 (710)
Q Consensus 89 g~~~~~~~~~~l~~L~~L~L-s~N~l~~~--------------------------------------------------- 116 (710)
|.+|+.++. |++|++||| ++|.++|.
T Consensus 337 G~ip~~l~~--L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~ 414 (876)
T 4ecn_A 337 GRVPDAIGQ--LTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEM 414 (876)
T ss_dssp EEECGGGGG--CTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTS
T ss_pred CcCchHHhc--cccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccc
Confidence 999999999 999999999 88866554
Q ss_pred -------------------------CCccccCCCCCcEEECcCCCCCC-----------------CCChhhc--CCCCCC
Q 005177 117 -------------------------FPVEIFNLTSLISLDISRNNFSG-----------------HFPGGIQ--SLRNLL 152 (710)
Q Consensus 117 -------------------------~p~~~~~l~~L~~L~Ls~N~l~~-----------------~~p~~l~--~L~~L~ 152 (710)
+|..|+++++|++|+|++|.++| .+|..++ ++++|+
T Consensus 415 ~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~ 494 (876)
T 4ecn_A 415 KPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLT 494 (876)
T ss_dssp CCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCC
T ss_pred cccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCC
Confidence 88899999999999999999999 4899988 999999
Q ss_pred EEECCCCCCCcCCchhccCCCCCCEEEccCCC-CCC-CCCcccCCCC-------CCCeEEecCCcCCCCCcc--cccccc
Q 005177 153 VLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY-FSG-PIPSQFGSFK-------SLEFLHLAGNLLNDQIPA--ELGMLK 221 (710)
Q Consensus 153 ~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~-l~~-~~p~~~~~l~-------~L~~L~L~~N~l~~~~p~--~l~~l~ 221 (710)
+|+|++|.+.+.+|..++++++|++|+|++|+ ++| .+|..+++++ +|+.|+|++|.++ .+|. .++.++
T Consensus 495 ~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~ 573 (876)
T 4ecn_A 495 DVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMV 573 (876)
T ss_dssp EEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCT
T ss_pred EEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCC
Confidence 99999999999999999999999999999998 998 8887666554 9999999999999 8998 899999
Q ss_pred cccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCC-CcEEEccccccCCCCCccccCCCC--CCEE
Q 005177 222 TVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTK-LESLFLFRNQLAGQVPWEFSRVTT--LKSL 298 (710)
Q Consensus 222 ~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~-L~~L~L~~n~l~~~~p~~~~~l~~--L~~L 298 (710)
+|+.|++++|.++ .+| .++++++|+.|++++|+++ .+|..+..+++ |+.|+|++|.++ .+|..+..++. |+.|
T Consensus 574 ~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L 649 (876)
T 4ecn_A 574 KLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSV 649 (876)
T ss_dssp TCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEE
T ss_pred CCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEE
Confidence 9999999999998 888 8999999999999999999 88888999998 999999999998 77877766654 8899
Q ss_pred EccCCCCCCCCCccc---c--CCCCCCEEEcccccCcccCCcccC-CCCCCcEEeccCCCCCCCCCcccCCC--------
Q 005177 299 DLSDNRLSGPIPESF---A--DLKNLRLLSLMYNEMSGTVPESLV-QLPSLEILFIWNNYFSGSLPENLGRN-------- 364 (710)
Q Consensus 299 ~Ls~N~l~~~~p~~~---~--~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~L~~N~l~g~~p~~l~~~-------- 364 (710)
++++|++.+.+|... . .+++|+.|+|++|+++ .+|..+. .+++|+.|+|++|.++ .+|..+...
T Consensus 650 ~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl 727 (876)
T 4ecn_A 650 DFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNT 727 (876)
T ss_dssp ECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTG
T ss_pred ECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhcccccccccc
Confidence 999998888766432 2 2347778888888877 4555443 6777888888888777 566554432
Q ss_pred CCCcEEECCCCcCCccCccccc--CCCceeeEecccCCccc
Q 005177 365 SKLRWVDVSTNNFNGSIPPDIC--SGGVLFKLILFSNNFTG 403 (710)
Q Consensus 365 ~~L~~L~ls~N~l~g~ip~~~~--~~~~L~~l~l~~N~l~g 403 (710)
++|+.|++++|+++ .+|..+. .+++|+.|++++|++++
T Consensus 728 ~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~ 767 (876)
T 4ecn_A 728 YLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS 767 (876)
T ss_dssp GGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS
T ss_pred CCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc
Confidence 27777888887777 6777776 77777788888877777
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-48 Score=410.61 Aligned_cols=245 Identities=20% Similarity=0.212 Sum_probs=194.0
Q ss_pred hhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCC-CCceeEEEEEEcC-CceeEE
Q 005177 450 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRH-KNLIRLLGFCYNR-HQAYLL 519 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H-~niv~l~g~~~~~-~~~~lv 519 (710)
..+.||+|+||.||+|.. ..++.||||+++... ...+.|.+|+++|.+++| ||||+++|+|.++ +..+||
T Consensus 68 l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV 147 (353)
T 4ase_A 68 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 147 (353)
T ss_dssp EEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred EeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEE
Confidence 567899999999999974 235789999998643 235679999999999976 8999999999764 568999
Q ss_pred EeecCCCChhhhhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCce
Q 005177 520 YDYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 581 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ 581 (710)
||||++|+|.++|+. .++|.++..|+.|||+||+|||+. +||||||||+|||+++++.+
T Consensus 148 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~v 224 (353)
T 4ase_A 148 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVV 224 (353)
T ss_dssp EECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccceeeCCCCCE
Confidence 999999999999963 257999999999999999999999 99999999999999999999
Q ss_pred EEcccCccccccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccc
Q 005177 582 HLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLG 656 (710)
Q Consensus 582 kl~DfGla~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~ 656 (710)
||+|||+|+........ ...++..|++||+.....++.++|||||||++|||+| |+.||.+...... .. .
T Consensus 225 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~-~~----~ 299 (353)
T 4ase_A 225 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FC----R 299 (353)
T ss_dssp EECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-HH----H
T ss_pred EECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHH-HH----H
Confidence 99999999865432211 1123445678898888899999999999999999998 8888864332111 10 1
Q ss_pred ccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 657 EMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
.+.+......+.. ...++.+++.+||+.||++||||.|++++|+.+
T Consensus 300 ~i~~g~~~~~p~~---~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~l 345 (353)
T 4ase_A 300 RLKEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345 (353)
T ss_dssp HHHHTCCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHcCCCCCCCcc---CCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 1111111111111 234577889999999999999999999999876
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-47 Score=412.77 Aligned_cols=242 Identities=15% Similarity=0.241 Sum_probs=198.6
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+++|++++|||||+++++|.+++..|||||||++|+
T Consensus 155 ~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~ 234 (423)
T 4fie_A 155 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 234 (423)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred eeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCc
Confidence 778899999999999985 689999999998643 235668899999999999999999999999999999999999999
Q ss_pred hhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Cccccc
Q 005177 528 LSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAKIA 604 (710)
Q Consensus 528 L~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~~~~ 604 (710)
|.++++. .+++.+...|+.||++||+|||+. +||||||||+||||+.++.+||+|||+|+........ ...+++
T Consensus 235 L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp 311 (423)
T 4fie_A 235 LTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTP 311 (423)
T ss_dssp HHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCCEECT
T ss_pred HHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccccccCc
Confidence 9999965 678999999999999999999999 9999999999999999999999999999876433222 223677
Q ss_pred ccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhc
Q 005177 605 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 684 (710)
Q Consensus 605 ~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 684 (710)
+|++||++....++.++||||+||++|||++|+.||.+...... +..+.+.. ......+......+.+++.+|
T Consensus 312 ~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~------~~~i~~~~-~~~~~~~~~~s~~~~dli~~~ 384 (423)
T 4fie_A 312 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA------MKMIRDNL-PPRLKNLHKVSPSLKGFLDRL 384 (423)
T ss_dssp TTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHHSC-CCCCSCTTSSCHHHHHHHHHH
T ss_pred CcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH------HHHHHcCC-CCCCcccccCCHHHHHHHHHH
Confidence 78899999888999999999999999999999999975432111 11111111 000111122235677899999
Q ss_pred CCCCCCCCCCHHHHHHH
Q 005177 685 TRSTPSDRPSMEEALKL 701 (710)
Q Consensus 685 l~~~p~~RPs~~evl~~ 701 (710)
|+.||++|||+.|++++
T Consensus 385 L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 385 LVRDPAQRATAAELLKH 401 (423)
T ss_dssp SCSSTTTSCCHHHHTTC
T ss_pred cCCChhHCcCHHHHhcC
Confidence 99999999999999874
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-47 Score=394.60 Aligned_cols=240 Identities=18% Similarity=0.163 Sum_probs=197.2
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
+|. ..+.||+|+||.||+|+. .+|+.||||.+.... ...+.+.+|++++++++|||||++++++.+++..|||
T Consensus 33 dy~--i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 33 DFK--FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccE--EEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 355 778999999999999985 789999999998642 2356789999999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
||||++|+|.+++.. .+++.+...|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+.......
T Consensus 111 mEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 999999999999975 678888999999999999999999 999999999999999999999999999987643211
Q ss_pred ----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 598 ----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 598 ----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
....++++|++||+.....++.++||||+||++|||+||+.||.+.... .....+.... ...+. ..
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~------~~~~~i~~~~-~~~p~---~~ 257 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG------LIFAKIIKLE-YDFPE---KF 257 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTC-CCCCT---TC
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHcCC-CCCCc---cc
Confidence 1223667788999999889999999999999999999999999754321 1111222111 11111 12
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEAL 699 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl 699 (710)
..++.+++.+|++.||++|||++|+.
T Consensus 258 s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 258 FPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp CHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred CHHHHHHHHHHccCCHhHCcChHHHc
Confidence 34567899999999999999999863
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=384.61 Aligned_cols=242 Identities=17% Similarity=0.163 Sum_probs=185.9
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
.+|. ..+.||+|+||.||+|.. .+|+.||||.++... ...+.+.+|++++++++|||||++++++.+++..|+
T Consensus 13 g~Y~--i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~i 90 (275)
T 3hyh_A 13 GNYQ--IVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIM 90 (275)
T ss_dssp -CCE--EEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred eCeE--EEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 4465 778999999999999985 679999999997642 225678999999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC
Q 005177 519 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 596 (710)
||||| +|+|.+++.. .+++.+...++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+|+......
T Consensus 91 vmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 91 VIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred EEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 99999 6899999865 678899999999999999999999 99999999999999999999999999998754322
Q ss_pred C-CCcccccccCchhhhhccCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 597 G-SFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 597 ~-~~~~~~~~~~~~e~~~~~~~-~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
. ....++++|++||...+..+ +.++||||+||++|||+||+.||.+.... .....+.... ...+.. ..
T Consensus 167 ~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~------~~~~~i~~~~-~~~p~~---~s 236 (275)
T 3hyh_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP------VLFKNISNGV-YTLPKF---LS 236 (275)
T ss_dssp --------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTC-CCCCTT---SC
T ss_pred ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHHcCC-CCCCCC---CC
Confidence 2 12236677889999887765 57899999999999999999999753211 1111111111 111111 23
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..+.+++.+|++.||++|||++|++++
T Consensus 237 ~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 237 PGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred HHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 456789999999999999999999873
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-47 Score=391.79 Aligned_cols=241 Identities=16% Similarity=0.126 Sum_probs=188.1
Q ss_pred cCCchhhhhhcCCCCCccEEEEc----CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCcee
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL----PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~----~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 517 (710)
+|. ..+.||+|+||.||+|+. .+++.||||.++... .....+.+|++++++++|||||++++++.+++..|
T Consensus 25 ~Y~--i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 102 (304)
T 3ubd_A 25 QFE--LLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLY 102 (304)
T ss_dssp GEE--EEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEE
T ss_pred ccE--EEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 355 778999999999999974 357899999997642 22456888999999999999999999999999999
Q ss_pred EEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 518 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
+|||||++|+|.+++.. .+++.+...++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+|+.....
T Consensus 103 ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 103 LILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 99999999999999975 578889999999999999999999 9999999999999999999999999999865322
Q ss_pred CC--CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 596 DG--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 596 ~~--~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
.. ....++++|++||......++.++||||+||++|||+||+.||.+..... ....+.... ...+.. .
T Consensus 180 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~------~~~~i~~~~-~~~p~~---~ 249 (304)
T 3ubd_A 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE------TMTMILKAK-LGMPQF---L 249 (304)
T ss_dssp -CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-CCCCTT---S
T ss_pred CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH------HHHHHHcCC-CCCCCc---C
Confidence 21 22235677889999998899999999999999999999999997543211 111121111 111111 2
Q ss_pred HHHHHHHHhhcCCCCCCCCCC-----HHHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPS-----MEEALK 700 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs-----~~evl~ 700 (710)
..++.+++.+||+.||++||| ++|+++
T Consensus 250 s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 250 SPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp CHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred CHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 345678999999999999998 467764
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-46 Score=384.64 Aligned_cols=241 Identities=17% Similarity=0.210 Sum_probs=184.5
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCC-------
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH------- 514 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~------- 514 (710)
+|. ..+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|+++|++++|||||++++++.+.+
T Consensus 6 dy~--~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 6 DFE--PIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HEE--EEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred hCE--EeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 355 678999999999999985 689999999997643 23567899999999999999999999987644
Q ss_pred -----ceeEEEeecCCCChhhhhhcC-----CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEc
Q 005177 515 -----QAYLLYDYLPNGNLSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 584 (710)
Q Consensus 515 -----~~~lv~Ey~~~gsL~~~l~~~-----~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~ 584 (710)
..|+|||||++|+|.+++... .++....+|+.|+++||+|||+. +|+||||||+|||++.++.+||+
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEc
Confidence 369999999999999999752 35667789999999999999999 99999999999999999999999
Q ss_pred ccCccccccccCCC--------------CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccc
Q 005177 585 EFGFKYLTQLADGS--------------FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP 650 (710)
Q Consensus 585 DfGla~~~~~~~~~--------------~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~ 650 (710)
|||+|+........ ...++++|++||...+..++.++|||||||++|||++ ||......
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~---- 233 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER---- 233 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHH----
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHH----
Confidence 99999875432110 1125667888999988899999999999999999997 55422110
Q ss_pred ccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 651 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
......+.+ ...++.+.+..+...+++.+||+.||++|||+.|++++
T Consensus 234 -~~~~~~~~~---~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 234 -VRTLTDVRN---LKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp -HHHHHHHHT---TCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -HHHHHHHhc---CCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 001111111 11123334445566789999999999999999999873
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-45 Score=428.90 Aligned_cols=329 Identities=34% Similarity=0.566 Sum_probs=195.2
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCcc-ccCCCCCcEEECcCCCCCCCCChhhcCCC-CCCE
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVE-IFNLTSLISLDISRNNFSGHFPGGIQSLR-NLLV 153 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~-~L~~ 153 (710)
.+..++++++.+.|.+|..+.. +++|++|+|++|.++|.+|.. +.++++|++|+|++|.+++.+|..+.+++ +|++
T Consensus 295 ~L~~L~Ls~n~l~~~~p~~~~~--l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~ 372 (768)
T 3rgz_A 295 TLTGLDLSGNHFYGAVPPFFGS--CSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLT 372 (768)
T ss_dssp TCSEEECCSSEEEECCCGGGGG--CTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSE
T ss_pred cCCEEECcCCcCCCccchHHhc--CCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcE
Confidence 4677788888888877777777 777888888888877777765 77777777777777777777777666554 5555
Q ss_pred EECCCCCCCc--------------------------CCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCC
Q 005177 154 LDAFSNSFSG--------------------------SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGN 207 (710)
Q Consensus 154 L~L~~N~l~~--------------------------~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N 207 (710)
|++++|.+++ .+|..++++++|++|+|++|++++.+|..++++++|+.|++++|
T Consensus 373 L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n 452 (768)
T 3rgz_A 373 LDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLN 452 (768)
T ss_dssp EECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred EEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCC
Confidence 5555555554 44445555555555555555555555555555555555555555
Q ss_pred cCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCc
Q 005177 208 LLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPW 287 (710)
Q Consensus 208 ~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~ 287 (710)
.+++.+|..++.+++|+.|++++|.++|.+|..++++++|++|++++|++++.+|..++.+++|+.|++++|+++|.+|.
T Consensus 453 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 532 (768)
T 3rgz_A 453 MLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPA 532 (768)
T ss_dssp CCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCG
T ss_pred cccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCH
Confidence 55555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred cccCCCCCCEEEccCCCCCCCCCccc------------------------------------------------------
Q 005177 288 EFSRVTTLKSLDLSDNRLSGPIPESF------------------------------------------------------ 313 (710)
Q Consensus 288 ~~~~l~~L~~L~Ls~N~l~~~~p~~~------------------------------------------------------ 313 (710)
.+..+++|+.|++++|+++|.+|..+
T Consensus 533 ~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 612 (768)
T 3rgz_A 533 ELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNP 612 (768)
T ss_dssp GGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCC
T ss_pred HHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccc
Confidence 55555555555555555554444322
Q ss_pred ----------------cCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcC
Q 005177 314 ----------------ADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNF 377 (710)
Q Consensus 314 ----------------~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l 377 (710)
..+++|+.|+|++|+++|.+|..++.+++|+.|+|++|.++|.+|..++++++|+.||+++|++
T Consensus 613 ~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l 692 (768)
T 3rgz_A 613 CNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKL 692 (768)
T ss_dssp SCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCC
T ss_pred cccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcc
Confidence 1233455555555555555555555555555555555555555555555555555555555555
Q ss_pred CccCcccccCCCceeeEecccCCcccchh
Q 005177 378 NGSIPPDICSGGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 378 ~g~ip~~~~~~~~L~~l~l~~N~l~g~i~ 406 (710)
+|.+|..+..++.|++|++++|+++|.||
T Consensus 693 ~g~ip~~l~~l~~L~~L~ls~N~l~g~iP 721 (768)
T 3rgz_A 693 DGRIPQAMSALTMLTEIDLSNNNLSGPIP 721 (768)
T ss_dssp EECCCGGGGGCCCCSEEECCSSEEEEECC
T ss_pred cCcCChHHhCCCCCCEEECcCCcccccCC
Confidence 55555555555555555555555555554
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-44 Score=377.48 Aligned_cols=297 Identities=28% Similarity=0.481 Sum_probs=222.6
Q ss_pred CCChhhHHHHHHHHhhCCCCCCCCCCCCCCCCCCCCCCCCCce--eeeeeeCCCC--CcEEEEEcCCCCCcc--cCCcch
Q 005177 22 SANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACS--WSGVKCNKNN--TIVVGINLSMKGLSG--ALPGKP 95 (710)
Q Consensus 22 ~~~~~~~~all~~k~~~~~~~~~l~~w~~~~~~~~~~~~~~C~--w~gv~C~~~~--~~v~~l~l~~~~l~g--~~~~~~ 95 (710)
.|.++|++||++||+++.||. .+.+|.. +.+||. |.||+|+..+ ++|+.++++++++.| .+|+.+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~--------~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l 72 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLP--------TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSL 72 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCT--------TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGG
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCC--------CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhH
Confidence 477899999999999998885 7899964 457888 9999998644 677777777777776 666666
Q ss_pred hhhcCCCCcEEECCC-CcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCC
Q 005177 96 LRIFFNELVDLNLSH-NSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEH 174 (710)
Q Consensus 96 ~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~ 174 (710)
.. +++|++|+|++ |.+.+.+|..|.++++|++|+|++|++++.+|..|.++++|++|+|++|.+++.+|..+.++++
T Consensus 73 ~~--l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 150 (313)
T 1ogq_A 73 AN--LPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPN 150 (313)
T ss_dssp GG--CTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTT
T ss_pred hC--CCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCC
Confidence 66 66677777763 6666666666666677777777766666666666666666666666666666666666666666
Q ss_pred CCEEEccCCCCCCCCCcccCCCC-CCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccc
Q 005177 175 LKVLNLAGSYFSGPIPSQFGSFK-SLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIA 253 (710)
Q Consensus 175 L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls 253 (710)
|++|+|++|++++.+|..++.++ +|++|++++|.+++.+| ..++.++ |++|+++
T Consensus 151 L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~------------------------~~~~~l~-L~~L~Ls 205 (313)
T 1ogq_A 151 LVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIP------------------------PTFANLN-LAFVDLS 205 (313)
T ss_dssp CCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECC------------------------GGGGGCC-CSEEECC
T ss_pred CCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCC------------------------hHHhCCc-ccEEECc
Confidence 66666666666666666666665 66666666665555444 4455554 7777777
Q ss_pred cccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccC
Q 005177 254 GANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTV 333 (710)
Q Consensus 254 ~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~ 333 (710)
+|++++.+|..+..+++|+.|++++|.+++.+|. +..+++|++|++++|++++.+|..+..+++|+.|+|++|+++|.+
T Consensus 206 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~i 284 (313)
T 1ogq_A 206 RNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI 284 (313)
T ss_dssp SSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEEC
T ss_pred CCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccC
Confidence 7777777777777888888888888888776665 677888999999999998888988999999999999999999888
Q ss_pred CcccCCCCCCcEEeccCCC-CCCC
Q 005177 334 PESLVQLPSLEILFIWNNY-FSGS 356 (710)
Q Consensus 334 p~~~~~l~~L~~L~L~~N~-l~g~ 356 (710)
|.. ..+++|+.|++++|+ +.|.
T Consensus 285 p~~-~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 285 PQG-GNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp CCS-TTGGGSCGGGTCSSSEEEST
T ss_pred CCC-ccccccChHHhcCCCCccCC
Confidence 876 788999999999997 6653
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-42 Score=372.26 Aligned_cols=248 Identities=20% Similarity=0.222 Sum_probs=189.3
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEc------CCceeEE
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYN------RHQAYLL 519 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~------~~~~~lv 519 (710)
..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|+++|++++|||||++++++.. .+..|||
T Consensus 58 ~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~iv 137 (398)
T 4b99_A 58 IIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVV 137 (398)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEE
T ss_pred EEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEE
Confidence 778999999999999985 789999999997532 235668899999999999999999999864 3578999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC-
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD- 596 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~- 596 (710)
||||+ |+|.+++.. .+++.....|+.|++.||+|||+. +||||||||+|||++.++.+||+|||+|+......
T Consensus 138 mE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~ 213 (398)
T 4b99_A 138 LDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPA 213 (398)
T ss_dssp EECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCC-----
T ss_pred EeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeeecccCcc
Confidence 99996 789999975 578899999999999999999999 99999999999999999999999999998653211
Q ss_pred -----CCCcccccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCccc-cc--------c--------
Q 005177 597 -----GSFPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP-ID--------G-------- 653 (710)
Q Consensus 597 -----~~~~~~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~-~~--------~-------- 653 (710)
.....++.+|.+||+..+. .++.++||||+||++|||+||+.||.+........ +. .
T Consensus 214 ~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~ 293 (398)
T 4b99_A 214 EHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAE 293 (398)
T ss_dssp --CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----
T ss_pred ccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhh
Confidence 1122356778889987654 56899999999999999999999997543211000 00 0
Q ss_pred cccccccccccCCCcchH----HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 654 LLGEMYNENEVGSSSSLQ----DEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.........+...+..+. .....+.+++.+|++.||++|||++|++++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 294 RVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 000000000000011111 123567899999999999999999999874
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-42 Score=367.64 Aligned_cols=196 Identities=14% Similarity=0.151 Sum_probs=165.5
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc----CCCcEEEEEEeeccchhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCce
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL----PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQA 516 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~----~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~ 516 (710)
+.+.|. ..+.||+|+||.||+|+. .+++.||||++.... ....+.+|+++|.++ +|||||++++++.+++..
T Consensus 19 l~~~Y~--i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 19 LSNVFK--IEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGTCE--EEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred ccCcEE--EEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 445566 788999999999999974 457899999997543 344577899999988 699999999999999999
Q ss_pred eEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC-CceEEcccCcccccccc
Q 005177 517 YLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-MEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 517 ~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~-~~~kl~DfGla~~~~~~ 595 (710)
|+|||||++|+|.++++ .+++.+...++.|++.||+|||+. +|+||||||+|||++.+ +.+||+|||+|+.....
T Consensus 96 ~lvmE~~~g~~L~~~~~-~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~ 171 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN-SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDT 171 (361)
T ss_dssp EEEEECCCCCCHHHHHT-TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECTTC
T ss_pred EEEEeCCCcccHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCc
Confidence 99999999999999996 588999999999999999999999 99999999999999976 79999999999754221
Q ss_pred CC------------------------------CCcccccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCCCCC
Q 005177 596 DG------------------------------SFPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGS 644 (710)
Q Consensus 596 ~~------------------------------~~~~~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~ 644 (710)
.. ....++++|++||+..+. .++.++||||+||++|||+||+.||..+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~ 251 (361)
T 4f9c_A 172 KIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS 251 (361)
T ss_dssp SCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCC
Confidence 10 011256778899987654 58899999999999999999999997554
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-42 Score=384.34 Aligned_cols=245 Identities=11% Similarity=0.063 Sum_probs=192.7
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHH---HHHHHHhccCCCCceeEEEEEEcCCc
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVS---EFITRIGTVRHKNLIRLLGFCYNRHQ 515 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~---~e~~~l~~l~H~niv~l~g~~~~~~~ 515 (710)
++|. ..+.||+|+||.||+|.. .+|+.||||+++.... ....+. .++++++.++|||||++++++.+++.
T Consensus 189 ddf~--i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ 266 (689)
T 3v5w_A 189 NDFS--VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK 266 (689)
T ss_dssp GGEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred HHeE--EEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCE
Confidence 3466 778999999999999985 6899999999975321 122233 34667788899999999999999999
Q ss_pred eeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccc
Q 005177 516 AYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~ 593 (710)
.|||||||+||+|.++|.. .+++.....|+.||+.||+|||+. +||||||||+|||||.+|++||+|||+|+...
T Consensus 267 lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 267 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 9999999999999999975 578888999999999999999999 99999999999999999999999999998765
Q ss_pred ccCCCCcccccccCchhhhh-ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHH
Q 005177 594 LADGSFPAKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 672 (710)
Q Consensus 594 ~~~~~~~~~~~~~~~~e~~~-~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (710)
........++++|.+||++. +..++.++||||+||++|||+||+.||.+...... ......+.... ...+. .
T Consensus 344 ~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~---~~i~~~i~~~~-~~~p~---~ 416 (689)
T 3v5w_A 344 KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK---HEIDRMTLTMA-VELPD---S 416 (689)
T ss_dssp SCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH---HHHHHHHHHCC-CCCCT---T
T ss_pred CCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHhhcCCC-CCCCc---c
Confidence 44333444677788899885 45789999999999999999999999974322111 01111111111 11111 1
Q ss_pred HHHHHHHHHhhcCCCCCCCCCC-----HHHHHH
Q 005177 673 EIKLVLDVALLCTRSTPSDRPS-----MEEALK 700 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RPs-----~~evl~ 700 (710)
....+.+++.+|++.||++|++ ++||.+
T Consensus 417 ~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 417 FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp SCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred CCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 2345778999999999999998 677764
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-40 Score=367.75 Aligned_cols=345 Identities=20% Similarity=0.198 Sum_probs=297.2
Q ss_pred CCceeee--eeeCCCC--------CcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccC-CccccCCCCCcE
Q 005177 61 YACSWSG--VKCNKNN--------TIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQF-PVEIFNLTSLIS 129 (710)
Q Consensus 61 ~~C~w~g--v~C~~~~--------~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~ 129 (710)
..|.|.+ +.|+... ..++.++++++.+.+..|..+.. +++|++|+|++|.+.+.+ |..|.++++|++
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~--l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~ 83 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSR--LQDLQFLKVEQQTPGLVIRNNTFRGLSSLII 83 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSS--CTTCCEEECCCCSTTCEECTTTTTTCTTCCE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhcc--CccccEEECcCCcccceECcccccccccCCE
Confidence 4577666 7887532 35788999999999887888877 899999999999998666 456889999999
Q ss_pred EECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchh--ccCCCCCCEEEccCCCCCCCCCcc-cCCCCCCCeEEecC
Q 005177 130 LDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAE--ISQLEHLKVLNLAGSYFSGPIPSQ-FGSFKSLEFLHLAG 206 (710)
Q Consensus 130 L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~--~~~L~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~L~~ 206 (710)
|+|++|.+++..|..|+++++|++|+|++|.+++.+|.. +.++++|++|+|++|++++..|.. +.++++|++|++++
T Consensus 84 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~ 163 (455)
T 3v47_A 84 LKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTF 163 (455)
T ss_dssp EECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTT
T ss_pred EeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCC
Confidence 999999999988999999999999999999999866665 899999999999999999887876 88999999999999
Q ss_pred CcCCCCCccccccc--ccccccccccccccccCCcc--------ccCCCccchhccccccCCccCchhccC---------
Q 005177 207 NLLNDQIPAELGML--KTVTHMEIGYNFYQGNIPWQ--------LGNMSEVQYLDIAGANLSGSIPKELSN--------- 267 (710)
Q Consensus 207 N~l~~~~p~~l~~l--~~L~~L~l~~n~~~g~~p~~--------l~~l~~L~~L~ls~n~l~g~~p~~l~~--------- 267 (710)
|.+++..|..+..+ .+|+.|+++.|.+.+..+.. +..+++|++|++++|++++.+|..+..
T Consensus 164 n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~ 243 (455)
T 3v47_A 164 NKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQS 243 (455)
T ss_dssp CCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEE
T ss_pred CcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceee
Confidence 99999888888776 67777888877776544432 235577888888888777655543321
Q ss_pred ------------------------------CCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCC
Q 005177 268 ------------------------------LTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLK 317 (710)
Q Consensus 268 ------------------------------l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 317 (710)
.++|+.|++++|.+++.+|..+..+++|+.|++++|++++..|..|..++
T Consensus 244 L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 323 (455)
T 3v47_A 244 LILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLT 323 (455)
T ss_dssp EECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred EeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcc
Confidence 26899999999999999999999999999999999999998899999999
Q ss_pred CCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecc
Q 005177 318 NLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILF 397 (710)
Q Consensus 318 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~ 397 (710)
+|+.|+|++|++++..|..+..+++|++|+|++|.+++..|..+..+++|+.|++++|++++..+..+..+++|+.|+++
T Consensus 324 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 403 (455)
T 3v47_A 324 HLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLH 403 (455)
T ss_dssp TCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred cCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEcc
Confidence 99999999999998889999999999999999999998889999999999999999999997555567889999999999
Q ss_pred cCCcccchhH
Q 005177 398 SNNFTGIVMF 407 (710)
Q Consensus 398 ~N~l~g~i~~ 407 (710)
+|++++..|.
T Consensus 404 ~N~l~~~~~~ 413 (455)
T 3v47_A 404 TNPWDCSCPR 413 (455)
T ss_dssp SSCBCCCTTT
T ss_pred CCCcccCCCc
Confidence 9999998873
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-42 Score=387.13 Aligned_cols=249 Identities=19% Similarity=0.236 Sum_probs=200.3
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
+.++|. ..+.||+|+||.||+|.. .+|+.||||.+.... ...+.+.+|+++|++++|||||++++++.+++..|||
T Consensus 155 il~~Y~--i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv 232 (573)
T 3uto_A 155 VLDHYD--IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI 232 (573)
T ss_dssp GGGTEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEE
T ss_pred CccccE--EEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 445566 778999999999999985 689999999998643 3466788999999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC--CceEEcccCccccccc
Q 005177 520 YDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN--MEPHLAEFGFKYLTQL 594 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~--~~~kl~DfGla~~~~~ 594 (710)
||||++|+|.+++.. .+++.+...++.||+.||+|||+. +|+||||||+|||++.+ +.+||+|||+|+....
T Consensus 233 ~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~ 309 (573)
T 3uto_A 233 YEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309 (573)
T ss_dssp EECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT
T ss_pred EeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccC
Confidence 999999999999854 467888999999999999999999 99999999999999854 8999999999987643
Q ss_pred cCCC-CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 595 ADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 595 ~~~~-~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
.... ...++++|++||++.+..++.++||||+||++|||++|+.||.+..... .+..+...........+...
T Consensus 310 ~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~------~~~~i~~~~~~~~~~~~~~~ 383 (573)
T 3uto_A 310 KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE------TLRNVKSCDWNMDDSAFSGI 383 (573)
T ss_dssp TSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHTTCCCCCSGGGTTS
T ss_pred CCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH------HHHHHHhCCCCCCcccccCC
Confidence 2211 1225667889999998899999999999999999999999997543211 11111111101111112223
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
...+.+++.+||+.||++|||+.|++++
T Consensus 384 s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 384 SEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp CHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 4567789999999999999999999874
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-40 Score=348.41 Aligned_cols=259 Identities=26% Similarity=0.419 Sum_probs=208.9
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEEcCCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
+..+.|. ..+.||+|+||.||+|...+|..||||++.... ...+.+.+|++++++++|||||+++++|.+++..++|
T Consensus 36 ~~~~~y~--~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (321)
T 2qkw_B 36 EATNNFD--HKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILI 113 (321)
T ss_dssp CCCCCCS--CCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEE
T ss_pred HHHhccC--ccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence 3455677 788999999999999998889999999987643 3467789999999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccc
Q 005177 520 YDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~ 593 (710)
|||+++|+|.+++.. ..+|.++.+++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 114 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 190 (321)
T 2qkw_B 114 YKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGT 190 (321)
T ss_dssp EECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCEECS
T ss_pred EEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence 999999999999964 368999999999999999999998 99999999999999999999999999987643
Q ss_pred ccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc-----cc----ccccccccc
Q 005177 594 LADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK-----PI----DGLLGEMYN 660 (710)
Q Consensus 594 ~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~-----~~----~~~~~~~~~ 660 (710)
..... ...+...|.+||......++.++|||||||++|||+||+.|+......... .. .....+..+
T Consensus 191 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (321)
T 2qkw_B 191 ELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVD 270 (321)
T ss_dssp SSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSS
T ss_pred cccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcC
Confidence 22111 112345578889888888999999999999999999999998744322111 00 011222233
Q ss_pred ccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 661 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
+. .. .....+....+.+++.+||+.||++|||+.|++++|+.+.
T Consensus 271 ~~-~~-~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l 314 (321)
T 2qkw_B 271 PN-LA-DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314 (321)
T ss_dssp SS-CT-TCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hh-hc-cccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 22 11 1223456678889999999999999999999999998663
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=351.31 Aligned_cols=261 Identities=30% Similarity=0.509 Sum_probs=208.6
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEcCCCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
..+.|. ..+.||+|+||.||+|...+|+.||||++..... ....+.+|++++++++|||||+++++|.+++..++|
T Consensus 28 ~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 105 (326)
T 3uim_A 28 ASDNFS--NKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 105 (326)
T ss_dssp TTTSSC--STTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEE
T ss_pred Hhhccc--cceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEE
Confidence 345677 8899999999999999988899999999986432 244688999999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccc
Q 005177 520 YDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~ 593 (710)
|||+++|+|.++++. .++|..+..|+.|+++||+|||+.+.++|+||||||+||+++.++.+||+|||+++...
T Consensus 106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 185 (326)
T 3uim_A 106 YPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 185 (326)
T ss_dssp EECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccC
Confidence 999999999999975 27899999999999999999999888899999999999999999999999999998654
Q ss_pred ccCCC---CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCC-----CCC--Ccccc----cccccccc
Q 005177 594 LADGS---FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAG-----SSL--QNKPI----DGLLGEMY 659 (710)
Q Consensus 594 ~~~~~---~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~-----~~~--~~~~~----~~~~~~~~ 659 (710)
..... ...++..|.+||......++.++|||||||++|||+||+.|+... ... ..|.. ........
T Consensus 186 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (326)
T 3uim_A 186 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALV 265 (326)
T ss_dssp SSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSS
T ss_pred cccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhc
Confidence 32221 111345577889888888899999999999999999999998611 100 01110 01112222
Q ss_pred cccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 660 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
+.. . ......+....+.+++.+||+.||++|||+.||+++|++..
T Consensus 266 ~~~-~-~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 266 DVD-L-QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp CTT-C-TTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred Chh-h-ccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 222 1 12234566788999999999999999999999999998654
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=352.64 Aligned_cols=257 Identities=18% Similarity=0.254 Sum_probs=198.3
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCC----ceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----QAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----~~~lv~Ey~~~ 525 (710)
..+.||+|+||.||+|... |+.||||++.........+..|+.++++++|||||++++++.+.. ..++||||+++
T Consensus 28 ~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~ 106 (322)
T 3soc_A 28 LLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEK 106 (322)
T ss_dssp EEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred hhheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCC
Confidence 7789999999999999874 899999999876656666777999999999999999999998754 36999999999
Q ss_pred CChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCC-------CCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 526 GNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDC-------YPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 526 gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~-------~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
|+|.++++. ..+|..+..++.|+++||+|||+.+ .++|+||||||+|||++.++.+||+|||+++.......
T Consensus 107 g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~ 186 (322)
T 3soc_A 107 GSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKS 186 (322)
T ss_dssp CBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSC
T ss_pred CCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccC
Confidence 999999975 5789999999999999999999862 35899999999999999999999999999976543221
Q ss_pred C----CcccccccCchhhhhc-----cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccc----------ccccc
Q 005177 598 S----FPAKIAWTESGEFYNA-----MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDG----------LLGEM 658 (710)
Q Consensus 598 ~----~~~~~~~~~~~e~~~~-----~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~----------~~~~~ 658 (710)
. ...++..|.+||.... ..++.++|||||||++|||+||+.|+.+.......+... .....
T Consensus 187 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (322)
T 3soc_A 187 AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVV 266 (322)
T ss_dssp CCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHH
T ss_pred ccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhh
Confidence 1 1123455778887765 356678899999999999999999987543321111110 00000
Q ss_pred ccccccC-CCc--chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 659 YNENEVG-SSS--SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 659 ~~~~~~~-~~~--~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
....... ... ........+.+++.+||+.||++|||+.||++.|+.+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 267 VHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp TTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1111000 011 112344568899999999999999999999999998864
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-40 Score=336.81 Aligned_cols=249 Identities=17% Similarity=0.246 Sum_probs=200.2
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.||+|+||.||+|...++..||||.++......+.+.+|++++.+++||||+++++++.+++..++||||+++|+|.
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (268)
T 3sxs_A 12 LLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLL 91 (268)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHH
Confidence 67889999999999999888889999999876666778999999999999999999999999999999999999999999
Q ss_pred hhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC---Ccccc
Q 005177 530 EKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS---FPAKI 603 (710)
Q Consensus 530 ~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~---~~~~~ 603 (710)
+++.. ..++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........ .....
T Consensus 92 ~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~ 168 (268)
T 3sxs_A 92 NYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFP 168 (268)
T ss_dssp HHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCCC
T ss_pred HHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCCcC
Confidence 99965 478999999999999999999998 9999999999999999999999999998765322111 11122
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
..+.+||......++.++||||+|+++|||+| |+.|+........ ...+........+.. ....+.+++.
T Consensus 169 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~------~~~~~~~~~~~~~~~---~~~~l~~li~ 239 (268)
T 3sxs_A 169 VKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV------VLKVSQGHRLYRPHL---ASDTIYQIMY 239 (268)
T ss_dssp GGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHH------HHHHHTTCCCCCCTT---SCHHHHHHHH
T ss_pred cccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHH------HHHHHcCCCCCCCCc---ChHHHHHHHH
Confidence 34678888888788999999999999999999 8888763321110 011111110111111 1235678899
Q ss_pred hcCCCCCCCCCCHHHHHHHHhccCCCCC
Q 005177 683 LCTRSTPSDRPSMEEALKLLSGLKPHGK 710 (710)
Q Consensus 683 ~Cl~~~p~~RPs~~evl~~L~~~~~~~~ 710 (710)
+|++.||++|||+.|+++.|+.+++.-|
T Consensus 240 ~~l~~~p~~Rps~~~ll~~L~~l~~~~k 267 (268)
T 3sxs_A 240 SCWHELPEKRPTFQQLLSSIEPLREKDK 267 (268)
T ss_dssp HTTCSSGGGSCCHHHHHHHHGGGCC---
T ss_pred HHcCCChhhCcCHHHHHHHHHHhhhccC
Confidence 9999999999999999999999987543
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-39 Score=340.55 Aligned_cols=247 Identities=18% Similarity=0.271 Sum_probs=197.1
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc-chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG-ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
..+.||+|+||.||+|.. .+|..||+|++... ....+.+.+|++++++++|||||++++++.+++..++||||+++|+
T Consensus 14 ~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 93 (310)
T 3s95_A 14 HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGT 93 (310)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred ccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCc
Confidence 678899999999999986 67999999998653 3346788999999999999999999999999999999999999999
Q ss_pred hhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC------
Q 005177 528 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS------ 598 (710)
Q Consensus 528 L~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~------ 598 (710)
|.+++.. ..+|.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 94 L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 170 (310)
T 3s95_A 94 LRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRS 170 (310)
T ss_dssp HHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC-----------
T ss_pred HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccccccccccccc
Confidence 9999965 568999999999999999999998 9999999999999999999999999999765322111
Q ss_pred ----------CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCc
Q 005177 599 ----------FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 668 (710)
Q Consensus 599 ----------~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (710)
...++..|.+||......++.++|||||||++|||++|..|+.......... ........+.. . +.
T Consensus 171 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~-~~~~~~~~~~~-~--~~ 246 (310)
T 3s95_A 171 LKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF-GLNVRGFLDRY-C--PP 246 (310)
T ss_dssp ---------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS-SBCHHHHHHHT-C--CT
T ss_pred ccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH-hhhhhcccccc-C--CC
Confidence 1123455778898888889999999999999999999998876432211100 00011111111 0 00
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 669 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 669 ~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
.....+.+++.+||+.||++|||+.|+++.|+.++
T Consensus 247 ---~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 247 ---NCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp ---TCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11134668889999999999999999999998875
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-40 Score=341.35 Aligned_cols=247 Identities=15% Similarity=0.221 Sum_probs=197.6
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEE
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 520 (710)
.+.|. ..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|+.++++++|||||++++++..++..++||
T Consensus 19 ~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 96 (297)
T 3fxz_A 19 KKKYT--RFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (297)
T ss_dssp GGTBC--CCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhcee--eeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEE
Confidence 34566 778999999999999984 7899999999976432 3567889999999999999999999999999999999
Q ss_pred eecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC-
Q 005177 521 DYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 598 (710)
Q Consensus 521 Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~- 598 (710)
||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 97 e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 173 (297)
T 3fxz_A 97 EYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 173 (297)
T ss_dssp ECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred ECCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCccccc
Confidence 99999999999976 578899999999999999999999 9999999999999999999999999998765432221
Q ss_pred -CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 599 -FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 599 -~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
...++..|.+||......++.++|||||||++|||+||+.||.......... .+.... .............+
T Consensus 174 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~ 246 (297)
T 3fxz_A 174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY------LIATNG-TPELQNPEKLSAIF 246 (297)
T ss_dssp CCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH------HHHHHC-SCCCSCGGGSCHHH
T ss_pred CCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH------HHHhCC-CCCCCCccccCHHH
Confidence 1224555788898888889999999999999999999999986433211100 000000 00001111223456
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 678 LDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+++.+||+.||++|||+.|++++
T Consensus 247 ~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 247 RDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHHHccCChhHCcCHHHHhhC
Confidence 789999999999999999999863
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-40 Score=338.18 Aligned_cols=248 Identities=20% Similarity=0.280 Sum_probs=200.3
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.||+|+||.||+|...++..||||++.......+.+.+|++++++++||||+++++++.+++..++||||+++|+|.
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (269)
T 4hcu_A 14 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 93 (269)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHH
Confidence 66889999999999999888999999999877666778999999999999999999999999999999999999999999
Q ss_pred hhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC---CCCcccc
Q 005177 530 EKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD---GSFPAKI 603 (710)
Q Consensus 530 ~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~---~~~~~~~ 603 (710)
+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...... .......
T Consensus 94 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~ 170 (269)
T 4hcu_A 94 DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP 170 (269)
T ss_dssp HHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCC
T ss_pred HHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccccccccCcccc
Confidence 99965 368999999999999999999998 99999999999999999999999999997653211 1111122
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
..+.+||......++.++||||+||++|||+| |+.|+....... ....+........+.. ....+.+++.
T Consensus 171 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~li~ 241 (269)
T 4hcu_A 171 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE------VVEDISTGFRLYKPRL---ASTHVYQIMN 241 (269)
T ss_dssp GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHHHTTCCCCCCTT---SCHHHHHHHH
T ss_pred cccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH------HHHHHhcCccCCCCCc---CCHHHHHHHH
Confidence 34778898888889999999999999999999 788876432110 1111111110111111 1245678899
Q ss_pred hcCCCCCCCCCCHHHHHHHHhccCCCC
Q 005177 683 LCTRSTPSDRPSMEEALKLLSGLKPHG 709 (710)
Q Consensus 683 ~Cl~~~p~~RPs~~evl~~L~~~~~~~ 709 (710)
+|++.||++|||+.|++++|+++.+.|
T Consensus 242 ~~l~~~p~~Rps~~~ll~~l~~l~~~g 268 (269)
T 4hcu_A 242 HCWRERPEDRPAFSRLLRQLAEIAESG 268 (269)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHccCCcccCcCHHHHHHHHHHHHHcc
Confidence 999999999999999999999887654
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=373.31 Aligned_cols=323 Identities=21% Similarity=0.253 Sum_probs=290.8
Q ss_pred CcEEEEEcCCCCCccc-----------------CCcchh--hhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCC
Q 005177 75 TIVVGINLSMKGLSGA-----------------LPGKPL--RIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRN 135 (710)
Q Consensus 75 ~~v~~l~l~~~~l~g~-----------------~~~~~~--~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 135 (710)
.....++++.+.++|. +|..++ . +++|++|+|++|.+.|.+|..|+++++|++|+|++|
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~--l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n 283 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDN--LKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACN 283 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGG--CTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTC
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCchhhhhcc--cCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCC
Confidence 3578899999999996 999988 7 999999999999999999999999999999999999
Q ss_pred C-CCC-CCChhhcCC------CCCCEEECCCCCCCcCCch--hccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEec
Q 005177 136 N-FSG-HFPGGIQSL------RNLLVLDAFSNSFSGSVPA--EISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLA 205 (710)
Q Consensus 136 ~-l~~-~~p~~l~~L------~~L~~L~L~~N~l~~~~p~--~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 205 (710)
+ ++| .+|..++.+ ++|++|++++|+++ .+|. .++++++|++|+|++|+++|.+| .|+++++|++|+++
T Consensus 284 ~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~ 361 (636)
T 4eco_A 284 RGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLA 361 (636)
T ss_dssp TTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECC
T ss_pred CCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECC
Confidence 8 999 899999887 99999999999999 8998 99999999999999999999999 89999999999999
Q ss_pred CCcCCCCCccccccccc-ccccccccccccccCCccccCCC--ccchhccccccCCccCchhcc-------CCCCCcEEE
Q 005177 206 GNLLNDQIPAELGMLKT-VTHMEIGYNFYQGNIPWQLGNMS--EVQYLDIAGANLSGSIPKELS-------NLTKLESLF 275 (710)
Q Consensus 206 ~N~l~~~~p~~l~~l~~-L~~L~l~~n~~~g~~p~~l~~l~--~L~~L~ls~n~l~g~~p~~l~-------~l~~L~~L~ 275 (710)
+|.++ .+|..+..+++ |++|++++|.++ .+|..++.++ +|++|++++|++++.+|..+. .+++|+.|+
T Consensus 362 ~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~ 439 (636)
T 4eco_A 362 YNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSIN 439 (636)
T ss_dssp SSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEE
T ss_pred CCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEE
Confidence 99998 89999999999 999999999998 8888887765 899999999999999998888 788999999
Q ss_pred ccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccc-cCC-------CCCCEEEcccccCcccCCcccC--CCCCCcE
Q 005177 276 LFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESF-ADL-------KNLRLLSLMYNEMSGTVPESLV--QLPSLEI 345 (710)
Q Consensus 276 L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l-------~~L~~L~Ls~N~l~g~~p~~~~--~l~~L~~ 345 (710)
+++|.++...+..+..+++|+.|+|++|+++ .+|..+ ..+ ++|+.|+|++|+++ .+|..+. .+++|+.
T Consensus 440 Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~ 517 (636)
T 4eco_A 440 LSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVG 517 (636)
T ss_dssp CCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCE
T ss_pred CcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCE
Confidence 9999999544445567899999999999999 566543 332 28999999999999 6888887 8999999
Q ss_pred EeccCCCCCCCCCcccCCCCCCcEEEC------CCCcCCccCcccccCCCceeeEecccCCcccchhH
Q 005177 346 LFIWNNYFSGSLPENLGRNSKLRWVDV------STNNFNGSIPPDICSGGVLFKLILFSNNFTGIVMF 407 (710)
Q Consensus 346 L~L~~N~l~g~~p~~l~~~~~L~~L~l------s~N~l~g~ip~~~~~~~~L~~l~l~~N~l~g~i~~ 407 (710)
|+|++|++++ +|..+..+++|+.|++ ++|++.+.+|..++.+++|+.|++++|++ +.+|.
T Consensus 518 L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~ 583 (636)
T 4eco_A 518 IDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNE 583 (636)
T ss_dssp EECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCS
T ss_pred EECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCH
Confidence 9999999997 8999999999999999 56888999999999999999999999999 66663
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-39 Score=348.10 Aligned_cols=244 Identities=21% Similarity=0.266 Sum_probs=194.0
Q ss_pred hhhhhcCCCCCccEEEEc--------CCCcEEEEEEeeccc--hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeE
Q 005177 450 ECEEAARPQSAAGCKAVL--------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~--------~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 518 (710)
..+.||+|+||.||+|.. .++..||||.++... ...+.+.+|+++++++ +|||||+++++|.+++..|+
T Consensus 85 ~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 164 (370)
T 2psq_A 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 164 (370)
T ss_dssp EEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEE
T ss_pred eeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEE
Confidence 668899999999999974 346689999998643 2356789999999999 89999999999999999999
Q ss_pred EEeecCCCChhhhhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc
Q 005177 519 LYDYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~ 580 (710)
||||+++|+|.+++.. .+++.++..++.|+++||+|||+. +|+||||||+|||++.++.
T Consensus 165 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~ 241 (370)
T 2psq_A 165 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNV 241 (370)
T ss_dssp EEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCC
T ss_pred EEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEECCCCC
Confidence 9999999999999964 257889999999999999999998 9999999999999999999
Q ss_pred eEEcccCccccccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccc
Q 005177 581 PHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLL 655 (710)
Q Consensus 581 ~kl~DfGla~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~ 655 (710)
+||+|||+++........ .......|.+||+.....++.++|||||||++|||+| |+.|+.+... .. ..
T Consensus 242 ~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~-~~-----~~ 315 (370)
T 2psq_A 242 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-EE-----LF 315 (370)
T ss_dssp EEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-GG-----HH
T ss_pred EEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH-HH-----HH
Confidence 999999999865432111 1112344778898888889999999999999999999 8888764321 11 11
Q ss_pred cccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 656 GEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
..+........+. .....+.+++.+||+.||++||++.|+++.|+.+
T Consensus 316 ~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~i 362 (370)
T 2psq_A 316 KLLKEGHRMDKPA---NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362 (370)
T ss_dssp HHHHTTCCCCCCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHhcCCCCCCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1111111011111 1234577889999999999999999999999876
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=342.54 Aligned_cols=245 Identities=20% Similarity=0.246 Sum_probs=190.7
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.||+|+||.||+|.. +|+.||||.+.... ...+.+.+|++++++++|||||++++++.+.+..++||||+++|
T Consensus 41 i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 119 (309)
T 3p86_A 41 IKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG 119 (309)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTC
T ss_pred eeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCC
Confidence 678899999999999986 78899999997643 23567889999999999999999999999999999999999999
Q ss_pred ChhhhhhcC-----CCHHHHHHHHHHHHHHHHHHhcCCCCC--ceecCCCCCCeEecCCCceEEcccCccccccccCC--
Q 005177 527 NLSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPA--IPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-- 597 (710)
Q Consensus 527 sL~~~l~~~-----~~~~~~~~i~~~ia~gL~yLH~~~~~~--iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-- 597 (710)
+|.+++... .++..+..++.|+++||+|||+. + |+||||||+||+++.++.+||+|||+++.......
T Consensus 120 ~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 196 (309)
T 3p86_A 120 SLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS 196 (309)
T ss_dssp BHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC------------
T ss_pred cHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCcccccccccc
Confidence 999999752 78889999999999999999998 6 99999999999999999999999999976433211
Q ss_pred CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccc-cccccCCCcchHHHHHH
Q 005177 598 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMY-NENEVGSSSSLQDEIKL 676 (710)
Q Consensus 598 ~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 676 (710)
....++..|.+||......++.++|||||||++|||+||+.||........ ...+. .......+. .....
T Consensus 197 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~------~~~~~~~~~~~~~~~---~~~~~ 267 (309)
T 3p86_A 197 KSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQV------VAAVGFKCKRLEIPR---NLNPQ 267 (309)
T ss_dssp -----CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHH------HHHHHHSCCCCCCCT---TSCHH
T ss_pred ccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHHhcCCCCCCCc---cCCHH
Confidence 112244557888988888889999999999999999999999864321110 00000 000001111 12245
Q ss_pred HHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 677 VLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 677 ~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
+.+++.+||+.||++|||+.|+++.|+.+.+
T Consensus 268 l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~ 298 (309)
T 3p86_A 268 VAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298 (309)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 6789999999999999999999999987643
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-39 Score=338.67 Aligned_cols=252 Identities=18% Similarity=0.226 Sum_probs=188.4
Q ss_pred hcCCchhhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHh--ccCCCCceeEEEEEEcC----Ccee
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIG--TVRHKNLIRLLGFCYNR----HQAY 517 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~--~l~H~niv~l~g~~~~~----~~~~ 517 (710)
+.|. ..+.||+|+||.||+|.. +|+.||||++.... .+.+.+|.+++. +++||||+++++++... +..+
T Consensus 8 ~~y~--~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 8 RDIT--LLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD--EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGCE--EEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG--HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred CcEE--EEEeeccCCCcEEEEEEE-CCEEEEEEEecccc--chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 3455 778999999999999987 79999999997543 334445555554 48999999999997653 4589
Q ss_pred EEEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHh--------cCCCCCceecCCCCCCeEecCCCceEEcccCc
Q 005177 518 LLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLH--------HDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 588 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH--------~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl 588 (710)
+||||+++|+|.++++. ..++..+.+++.|+++||+||| +. +|+||||||+|||++.++.+||+|||+
T Consensus 83 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 159 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADLGL 159 (301)
T ss_dssp EEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred EehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeCCC
Confidence 99999999999999975 5789999999999999999999 65 999999999999999999999999999
Q ss_pred cccccccCCC------CcccccccCchhhhhcc------CCccccceeeHHHHHHHHHhC----------CCCCCCCCCC
Q 005177 589 KYLTQLADGS------FPAKIAWTESGEFYNAM------KEEMYMDVYGFGEIILEILTN----------GRLTNAGSSL 646 (710)
Q Consensus 589 a~~~~~~~~~------~~~~~~~~~~~e~~~~~------~~~~~~DVySfGvvl~Elltg----------~~p~~~~~~~ 646 (710)
++........ ...++..|.+||..... .++.++|||||||++|||+|| +.|+......
T Consensus 160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~ 239 (301)
T 3q4u_A 160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN 239 (301)
T ss_dssp CEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred eeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCC
Confidence 8765322111 11244557788877655 455789999999999999999 6666532211
Q ss_pred Ccccccccccccc--cccccCCCc--chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 647 QNKPIDGLLGEMY--NENEVGSSS--SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 647 ~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
.. ... ...... +......+. ........+.+++.+||+.||++|||+.|+++.|+++
T Consensus 240 ~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 240 DP-SFE-DMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SC-CHH-HHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred Cc-chh-hhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 11 000 000000 000001111 1123556788999999999999999999999999876
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-38 Score=362.91 Aligned_cols=329 Identities=22% Similarity=0.227 Sum_probs=222.4
Q ss_pred CcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEE
Q 005177 75 TIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVL 154 (710)
Q Consensus 75 ~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L 154 (710)
..++.++++++.+.+..+..+.. +++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|+++++|++|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~--l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 109 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSN--FSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENL 109 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTT--CTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEE
T ss_pred CCcCEEECCCCCcCEeChhhccC--CccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEE
Confidence 45889999999999887778877 8999999999999998888899999999999999999999889999999999999
Q ss_pred ECCCCCCCcCCchhccCCCCCCEEEccCCCCCC-CCCcccCCCCCCCeEEecCCcCCCCCccccccccc-----------
Q 005177 155 DAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKT----------- 222 (710)
Q Consensus 155 ~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~----------- 222 (710)
+|++|.+++..|..++++++|++|+|++|.+++ .+|..|+++++|++|++++|.+++..|..++.+++
T Consensus 110 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~ 189 (606)
T 3vq2_A 110 VAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMS 189 (606)
T ss_dssp ECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECT
T ss_pred EccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeecc
Confidence 999999998777889999999999999999986 67999999999999999999887765554433332
Q ss_pred ----------------cccccccccccc----------------------------------------------------
Q 005177 223 ----------------VTHMEIGYNFYQ---------------------------------------------------- 234 (710)
Q Consensus 223 ----------------L~~L~l~~n~~~---------------------------------------------------- 234 (710)
|+.|++++|.+.
T Consensus 190 ~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~ 269 (606)
T 3vq2_A 190 LNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLT 269 (606)
T ss_dssp TCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEEC
T ss_pred CCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheecc
Confidence 222222222111
Q ss_pred --------------------------------------------------ccCCc--------------------cccCC
Q 005177 235 --------------------------------------------------GNIPW--------------------QLGNM 244 (710)
Q Consensus 235 --------------------------------------------------g~~p~--------------------~l~~l 244 (710)
+.+|. .++.+
T Consensus 270 ~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l 349 (606)
T 3vq2_A 270 YTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVAL 349 (606)
T ss_dssp CCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCC
T ss_pred ccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhccC
Confidence 11110 12244
Q ss_pred CccchhccccccCCcc--CchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCC-ccccCCCCCCE
Q 005177 245 SEVQYLDIAGANLSGS--IPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIP-ESFADLKNLRL 321 (710)
Q Consensus 245 ~~L~~L~ls~n~l~g~--~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~ 321 (710)
++|++|++++|++++. +|..+..+++|++|++++|.+++ +|..+..+++|+.|++++|++.+..| ..+..+++|+.
T Consensus 350 ~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 428 (606)
T 3vq2_A 350 PSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLY 428 (606)
T ss_dssp TTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCE
T ss_pred CCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCE
Confidence 5566666666666544 35556666666666666666554 33445555555555555555555444 44555555555
Q ss_pred EEcccccCcccCCcccCCCCCCcEEeccCCCCCC-CCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecccCC
Q 005177 322 LSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSG-SLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNN 400 (710)
Q Consensus 322 L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g-~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~ 400 (710)
|++++|.+++..|..+..+++|++|++++|.+++ .+|..+..+++|+.|++++|.+++..|..+..+++|+.|++++|+
T Consensus 429 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 508 (606)
T 3vq2_A 429 LDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNN 508 (606)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCc
Confidence 5555555555555555555555555555555554 245555555555555555555555555555555555555555555
Q ss_pred cccchh
Q 005177 401 FTGIVM 406 (710)
Q Consensus 401 l~g~i~ 406 (710)
+++.+|
T Consensus 509 l~~~~~ 514 (606)
T 3vq2_A 509 LLFLDS 514 (606)
T ss_dssp CSCEEG
T ss_pred CCCcCH
Confidence 555443
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-40 Score=345.52 Aligned_cols=247 Identities=17% Similarity=0.193 Sum_probs=198.1
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
+.|. ..+.||+|+||.||+|.. .+|..||+|.+.........+.+|++++++++|||||++++++.+.+..++||||
T Consensus 5 ~~y~--~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 5 EKYM--IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hceE--eeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 4455 678899999999999985 5789999999987666677789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC--CCceEEcccCccccccccCC
Q 005177 523 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE--NMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 523 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~--~~~~kl~DfGla~~~~~~~~ 597 (710)
+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++.......
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~ 159 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc
Confidence 999999999975 468899999999999999999998 9999999999999997 78999999999976543211
Q ss_pred C-CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHH
Q 005177 598 S-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 676 (710)
Q Consensus 598 ~-~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (710)
. ...+.++|.+||......++.++||||+||++|||+||+.||.+..... ....+...........+.+....
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~~~~~~~~~~~~s~~ 233 (321)
T 1tki_A 160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ------IIENIMNAEYTFDEEAFKEISIE 233 (321)
T ss_dssp EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHHTCCCCCHHHHTTSCHH
T ss_pred cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH------HHHHHHcCCCCCChhhhccCCHH
Confidence 1 1124455778898887778899999999999999999999986433211 11111111101101111223456
Q ss_pred HHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 677 VLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 677 ~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+.+++.+|++.||++|||+.|++++
T Consensus 234 ~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 234 AMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHcCCChhHCcCHHHHhcC
Confidence 7899999999999999999999874
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-39 Score=356.24 Aligned_cols=245 Identities=17% Similarity=0.268 Sum_probs=198.2
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.||+|+||.||+|...++..||||+++......+.+.+|++++++++|||||++++++. .+..++|||||++|+|.
T Consensus 192 ~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~ 270 (454)
T 1qcf_A 192 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLL 270 (454)
T ss_dssp EEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHH
T ss_pred EEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHH
Confidence 66889999999999999988999999999876666788999999999999999999999986 56789999999999999
Q ss_pred hhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC---CCCccc
Q 005177 530 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD---GSFPAK 602 (710)
Q Consensus 530 ~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~---~~~~~~ 602 (710)
++++. ..++....+++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...... ......
T Consensus 271 ~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~ 347 (454)
T 1qcf_A 271 DFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF 347 (454)
T ss_dssp HHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSS
T ss_pred HHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCcc
Confidence 99974 578889999999999999999998 99999999999999999999999999998653211 111112
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHH
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 681 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 681 (710)
...+.+||......++.++|||||||++|||+| |+.|+.+..... ....+........+. .....+.+++
T Consensus 348 ~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~------~~~~i~~~~~~~~~~---~~~~~l~~li 418 (454)
T 1qcf_A 348 PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE------VIRALERGYRMPRPE---NCPEELYNIM 418 (454)
T ss_dssp CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH------HHHHHHHTCCCCCCT---TSCHHHHHHH
T ss_pred cccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCCCCCC---CCCHHHHHHH
Confidence 233677888888889999999999999999999 888886432111 011111111011111 1234577899
Q ss_pred hhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 682 LLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 682 ~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
.+||+.||++||||+++++.|+.+..
T Consensus 419 ~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 419 MRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred HHHccCChhHCcCHHHHHHHHHHHHh
Confidence 99999999999999999999998854
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-39 Score=341.96 Aligned_cols=245 Identities=19% Similarity=0.262 Sum_probs=194.5
Q ss_pred hhhhhcCCCCCccEEEEcC----CCcEEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~----~g~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
..+.||+|+||.||+|... .+..||||+++.. ....+.+.+|++++++++|||||++++++.+++..++||||+
T Consensus 53 i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 132 (325)
T 3kul_A 53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYM 132 (325)
T ss_dssp EEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECC
T ss_pred EeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCC
Confidence 6789999999999999862 4557999999864 234667899999999999999999999999999999999999
Q ss_pred CCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC-
Q 005177 524 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF- 599 (710)
Q Consensus 524 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~- 599 (710)
++|+|.++++. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 133 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 209 (325)
T 3kul_A 133 ENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAY 209 (325)
T ss_dssp TTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC----CCE
T ss_pred CCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccccCcccee
Confidence 99999999964 578999999999999999999998 99999999999999999999999999998654322111
Q ss_pred ----cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 600 ----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 600 ----~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
...+..|.+||......++.++|||||||++|||++ |+.|+....... ....+........+. ...
T Consensus 210 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~---~~~ 280 (325)
T 3kul_A 210 TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD------VISSVEEGYRLPAPM---GCP 280 (325)
T ss_dssp ECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH------HHHHHHTTCCCCCCT---TCC
T ss_pred eccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH------HHHHHHcCCCCCCCC---CcC
Confidence 112234778888888888999999999999999999 888886432111 011111111011111 123
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
..+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 281 ~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~ 312 (325)
T 3kul_A 281 HALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312 (325)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 45778999999999999999999999998774
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=342.52 Aligned_cols=242 Identities=17% Similarity=0.209 Sum_probs=194.1
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 520 (710)
.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+++..++||
T Consensus 16 ~y~--~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 16 NYR--LLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp TEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CEE--EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 355 778999999999999986 789999999997642 23566889999999999999999999999999999999
Q ss_pred eecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-
Q 005177 521 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 597 (710)
Q Consensus 521 Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~- 597 (710)
||+++|+|.+++.. .+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 94 e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 170 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL 170 (328)
T ss_dssp CCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGG
T ss_pred ECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcc
Confidence 99999999999854 678889999999999999999998 999999999999999999999999999976542211
Q ss_pred CCcccccccCchhhhhccCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHH
Q 005177 598 SFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 676 (710)
Q Consensus 598 ~~~~~~~~~~~~e~~~~~~~-~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (710)
....++.+|.+||...+..+ +.++||||+||++|||+||+.||.+..... ....+.... ...+.. ....
T Consensus 171 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~------~~~~i~~~~-~~~p~~---~s~~ 240 (328)
T 3fe3_A 171 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE------LRERVLRGK-YRIPFY---MSTD 240 (328)
T ss_dssp GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-CCCCTT---SCHH
T ss_pred ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCC-CCCCCC---CCHH
Confidence 11224556888898877665 478999999999999999999987432110 111111111 111111 1245
Q ss_pred HHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 677 VLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 677 ~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+.+++.+|++.||++|||++|++++
T Consensus 241 ~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 241 CENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp HHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred HHHHHHHHCCCChhHCcCHHHHhcC
Confidence 6788999999999999999999864
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=348.86 Aligned_cols=248 Identities=19% Similarity=0.276 Sum_probs=189.1
Q ss_pred cCCchhhhhhcCCCCCccEEEEcC----CCcEEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVLP----TGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~~----~g~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
.|. ..+.||+|+||.||+|... ++..||||+++.. ....+.+.+|++++++++|||||+++|+|.+.+..++
T Consensus 46 ~~~--~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 46 NIS--IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GCC--CCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred hce--eeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 455 7789999999999999864 5778999999864 2345678999999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 519 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
||||+++|+|.++++. ..++.++..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 9999999999999975 478999999999999999999998 9999999999999999999999999999865432
Q ss_pred CCCC---c--ccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcc
Q 005177 596 DGSF---P--AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSS 669 (710)
Q Consensus 596 ~~~~---~--~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (710)
.... . .....|.+||+.....++.++|||||||++|||++ |+.|+....... ....+........+.
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~------~~~~i~~~~~~~~~~- 273 (373)
T 2qol_A 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD------VIKAVDEGYRLPPPM- 273 (373)
T ss_dssp -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH------HHHHHHTTEECCCCT-
T ss_pred CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCCCCCc-
Confidence 1111 0 11234778898888889999999999999999998 888886432110 011111110011111
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 670 LQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 670 ~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
+....+.+++.+||+.||++||+|.|+++.|+.+.
T Consensus 274 --~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~ 308 (373)
T 2qol_A 274 --DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308 (373)
T ss_dssp --TCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --cccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHH
Confidence 12345778999999999999999999999998763
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-40 Score=353.67 Aligned_cols=246 Identities=18% Similarity=0.214 Sum_probs=195.4
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.||+|+||.||+|.. .+|+.||||.++... ...+.+.+|++++++++|||||+++|+|.+++..++||||+++|
T Consensus 118 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 197 (377)
T 3cbl_A 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 197 (377)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred EeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCC
Confidence 668899999999999997 479999999997542 23456889999999999999999999999999999999999999
Q ss_pred Chhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC----CCC
Q 005177 527 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD----GSF 599 (710)
Q Consensus 527 sL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~----~~~ 599 (710)
+|.++++. ..++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 198 ~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~ 274 (377)
T 3cbl_A 198 DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGL 274 (377)
T ss_dssp BHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSC
T ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCC
Confidence 99999975 478999999999999999999998 99999999999999999999999999987543211 011
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 678 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (710)
......+.+||......++.++|||||||++|||+| |+.|+........ ...+........+.. ....+.
T Consensus 275 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~------~~~~~~~~~~~~~~~---~~~~l~ 345 (377)
T 3cbl_A 275 RQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT------REFVEKGGRLPCPEL---CPDAVF 345 (377)
T ss_dssp CEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHH------HHHHHTTCCCCCCTT---CCHHHH
T ss_pred CCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH------HHHHHcCCCCCCCCC---CCHHHH
Confidence 112233678888887888999999999999999999 8888764321110 000000100111111 123567
Q ss_pred HHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 679 DVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 679 ~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
+++.+||+.||++|||++|+++.|+++++
T Consensus 346 ~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 346 RLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 88999999999999999999999998754
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-39 Score=339.09 Aligned_cols=242 Identities=15% Similarity=0.223 Sum_probs=194.1
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++++++|||||++++++..++..++||||+++|+
T Consensus 49 ~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 128 (321)
T 2c30_A 49 SYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128 (321)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCB
T ss_pred ccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCC
Confidence 456899999999999986 4799999999986433 35678899999999999999999999999999999999999999
Q ss_pred hhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Cccccc
Q 005177 528 LSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAKIA 604 (710)
Q Consensus 528 L~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~~~~ 604 (710)
|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ ...++.
T Consensus 129 L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 205 (321)
T 2c30_A 129 LTDIVSQVRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTP 205 (321)
T ss_dssp HHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCG
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccccCCc
Confidence 9999876 678999999999999999999998 9999999999999999999999999998765432111 122445
Q ss_pred ccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhc
Q 005177 605 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 684 (710)
Q Consensus 605 ~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 684 (710)
.|.+||......++.++|||||||++|||+||+.|+........ ...+.+.. .............+.+++.+|
T Consensus 206 ~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~------~~~~~~~~-~~~~~~~~~~~~~l~~li~~~ 278 (321)
T 2c30_A 206 YWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQA------MKRLRDSP-PPKLKNSHKVSPVLRDFLERM 278 (321)
T ss_dssp GGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHHSS-CCCCTTGGGSCHHHHHHHHHH
T ss_pred cccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHhcCC-CCCcCccccCCHHHHHHHHHH
Confidence 57788988888889999999999999999999999874332110 01111111 000011111234567888999
Q ss_pred CCCCCCCCCCHHHHHHH
Q 005177 685 TRSTPSDRPSMEEALKL 701 (710)
Q Consensus 685 l~~~p~~RPs~~evl~~ 701 (710)
++.||++|||+.|+++.
T Consensus 279 l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 279 LVRDPQERATAQELLDH 295 (321)
T ss_dssp SCSSTTTSCCHHHHHTS
T ss_pred ccCChhhCcCHHHHhcC
Confidence 99999999999999874
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-39 Score=345.41 Aligned_cols=249 Identities=18% Similarity=0.164 Sum_probs=197.9
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-------hHHHHHHHHHHHhccCCCCceeEEEEEEc
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-------RIKIVSEFITRIGTVRHKNLIRLLGFCYN 512 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-------~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 512 (710)
++.+.|. ..+.||+|+||.||+|.. .+|+.||||.++.... ..+.+.+|++++++++|||||++++++.+
T Consensus 9 ~~~~~y~--~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 86 (361)
T 2yab_A 9 KVEDFYD--IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYEN 86 (361)
T ss_dssp CGGGTEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred ChhhceE--EeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEe
Confidence 4445566 778999999999999985 5799999999986432 24678999999999999999999999999
Q ss_pred CCceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC----ceEEccc
Q 005177 513 RHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM----EPHLAEF 586 (710)
Q Consensus 513 ~~~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~----~~kl~Df 586 (710)
++..++||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++ .+||+||
T Consensus 87 ~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 87 RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp SSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 9999999999999999999965 568899999999999999999998 999999999999998876 7999999
Q ss_pred CccccccccCC-CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccC
Q 005177 587 GFKYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 665 (710)
Q Consensus 587 Gla~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (710)
|+++....... ....+++.|.+||+.....++.++||||+||++|||++|+.||.+..... ....+.......
T Consensus 164 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~------~~~~i~~~~~~~ 237 (361)
T 2yab_A 164 GLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE------TLANITAVSYDF 237 (361)
T ss_dssp SSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHTTCCCC
T ss_pred CCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhcCCCC
Confidence 99986543221 12225566888898888889999999999999999999999987432211 111111111000
Q ss_pred CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 666 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 666 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
....+......+.+++.+|+..||++|||+.|+++
T Consensus 238 ~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 238 DEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 01111122346778999999999999999999985
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-39 Score=332.59 Aligned_cols=245 Identities=16% Similarity=0.186 Sum_probs=195.8
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.||+|+||.||+|...++..||||+++......+.+.+|++++.+++||||+++++++.+++..++||||+++|+|.
T Consensus 28 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (283)
T 3gen_A 28 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 107 (283)
T ss_dssp EEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHH
T ss_pred hHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHH
Confidence 67899999999999999988999999999976666778999999999999999999999999999999999999999999
Q ss_pred hhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC---CCCcccc
Q 005177 530 EKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD---GSFPAKI 603 (710)
Q Consensus 530 ~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~---~~~~~~~ 603 (710)
+++.. ..++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... .......
T Consensus 108 ~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~ 184 (283)
T 3gen_A 108 NYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP 184 (283)
T ss_dssp HHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTTSC
T ss_pred HHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccccccccccCCccC
Confidence 99965 578999999999999999999998 99999999999999999999999999997653211 1111123
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
..+.+||......++.++||||+||++|||+| |+.|+....... ....+........+... ...+.+++.
T Consensus 185 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~---~~~l~~li~ 255 (283)
T 3gen_A 185 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE------TAEHIAQGLRLYRPHLA---SEKVYTIMY 255 (283)
T ss_dssp GGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH------HHHHHHTTCCCCCCTTC---CHHHHHHHH
T ss_pred cccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH------HHHHHhcccCCCCCCcC---CHHHHHHHH
Confidence 34778898888889999999999999999999 888876432111 01111111101111111 245678899
Q ss_pred hcCCCCCCCCCCHHHHHHHHhccC
Q 005177 683 LCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 683 ~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
+||+.||++|||++|+++.|+++.
T Consensus 256 ~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 256 SCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp HTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHccCChhHCcCHHHHHHHHHHHh
Confidence 999999999999999999998763
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-39 Score=358.69 Aligned_cols=246 Identities=20% Similarity=0.230 Sum_probs=197.9
Q ss_pred hhhhhcCCCCCccEEEEcC-CCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCCh
Q 005177 450 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
..+.||+|+||.||+|... ++..||||.++......+.|.+|++++++++|||||+++|+|.+++..++|||||++|+|
T Consensus 224 ~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L 303 (495)
T 1opk_A 224 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 303 (495)
T ss_dssp EEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred eeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCH
Confidence 6688999999999999874 589999999987666678899999999999999999999999999999999999999999
Q ss_pred hhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC---CCcc
Q 005177 529 SEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG---SFPA 601 (710)
Q Consensus 529 ~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~---~~~~ 601 (710)
.++++. ..++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++....... ....
T Consensus 304 ~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~ 380 (495)
T 1opk_A 304 LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 380 (495)
T ss_dssp HHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTCC
T ss_pred HHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCceeecCCCc
Confidence 999964 468899999999999999999998 999999999999999999999999999986532211 1111
Q ss_pred cccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHH
Q 005177 602 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 680 (710)
Q Consensus 602 ~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 680 (710)
....+.+||......++.++|||||||++|||+| |+.|+.+..... . ...+........+. .....+.++
T Consensus 381 ~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~--~----~~~~~~~~~~~~~~---~~~~~l~~l 451 (495)
T 1opk_A 381 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--V----YELLEKDYRMERPE---GCPEKVYEL 451 (495)
T ss_dssp CCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--H----HHHHHTTCCCCCCT---TCCHHHHHH
T ss_pred CCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH--H----HHHHHcCCCCCCCC---CCCHHHHHH
Confidence 2233677888888888999999999999999999 777776432111 0 01111110011111 122456788
Q ss_pred HhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 681 ALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 681 ~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
+.+||+.||++||||.|+++.|+.+..
T Consensus 452 i~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 452 MRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred HHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 999999999999999999999998754
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-38 Score=329.30 Aligned_cols=258 Identities=23% Similarity=0.379 Sum_probs=201.7
Q ss_pred hhhhhcCCchhh------hhhcCCCCCccEEEEcCCCcEEEEEEeeccc-----hhHHHHHHHHHHHhccCCCCceeEEE
Q 005177 440 NDVLRSFNSTEC------EEAARPQSAAGCKAVLPTGITVSVKKIEWGA-----TRIKIVSEFITRIGTVRHKNLIRLLG 508 (710)
Q Consensus 440 ~~~~~~~~~~~~------~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~-----~~~~~~~~e~~~l~~l~H~niv~l~g 508 (710)
..+++.|+ .. +.||+|+||.||+|.. +++.||||++.... ...+.+.+|++++++++||||+++++
T Consensus 21 ~~~~~~f~--~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 97 (307)
T 2nru_A 21 KNVTNNFD--ERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97 (307)
T ss_dssp HHHTTTTC--CSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred HHHHcccc--cccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEE
Confidence 34555566 44 7899999999999987 68899999997532 23567899999999999999999999
Q ss_pred EEEcCCceeEEEeecCCCChhhhhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEE
Q 005177 509 FCYNRHQAYLLYDYLPNGNLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 583 (710)
Q Consensus 509 ~~~~~~~~~lv~Ey~~~gsL~~~l~~-----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl 583 (710)
++.+.+..++||||+++|+|.+++.. ..+|..+..++.|+++||+|||+. +|+||||||+||+++.++.+||
T Consensus 98 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl 174 (307)
T 2nru_A 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKI 174 (307)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEE
T ss_pred EEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcCCCcEEE
Confidence 99999999999999999999999863 478999999999999999999998 9999999999999999999999
Q ss_pred cccCccccccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc-c------
Q 005177 584 AEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-D------ 652 (710)
Q Consensus 584 ~DfGla~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~-~------ 652 (710)
+|||+++........ ...+...+.+||...+ .++.++|||||||++|||+||+.|+........... .
T Consensus 175 ~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 253 (307)
T 2nru_A 175 SDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDE 253 (307)
T ss_dssp CCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTT
T ss_pred eecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhh
Confidence 999998765432111 1123444677787654 478899999999999999999999875432211000 0
Q ss_pred -ccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 653 -GLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 653 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
..+....++. . ..........+.+++.+||+.||++|||+.|++++|++++.
T Consensus 254 ~~~~~~~~~~~-~--~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 254 EKTIEDYIDKK-M--NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp SCCHHHHSCSS-C--SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred hhhhhhhcccc-c--cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 0011112221 1 12234456678899999999999999999999999998864
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-38 Score=355.21 Aligned_cols=338 Identities=22% Similarity=0.274 Sum_probs=242.0
Q ss_pred CceeeeeeeCCCC-----------CcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEE
Q 005177 62 ACSWSGVKCNKNN-----------TIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISL 130 (710)
Q Consensus 62 ~C~w~gv~C~~~~-----------~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 130 (710)
.|.|.|+ |+... ..++.++++++.+.+..|..+.. +++|++|+|++|.+++..|..|.++++|++|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~--l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 79 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRA--CANLQVLILKSSRINTIEGDAFYSLGSLEHL 79 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSS--CTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhc--CCcccEEECCCCCcCccChhhccccccCCEE
Confidence 5889888 86431 25889999999999887877877 8999999999999998888899999999999
Q ss_pred ECcCCCCCCCCChhhcCCCCCCEEECCCCCCCc-CCchhccCCCCCCEEEccCCCCCCCCC-cccCCCCCCCeEEecCCc
Q 005177 131 DISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSG-SVPAEISQLEHLKVLNLAGSYFSGPIP-SQFGSFKSLEFLHLAGNL 208 (710)
Q Consensus 131 ~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~-~~p~~~~~L~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~ 208 (710)
+|++|.+++..|..|+++++|++|+|++|.+++ .+|..++++++|++|++++|.+.+.+| ..|.++++|++|++++|.
T Consensus 80 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~ 159 (549)
T 2z81_A 80 DLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALS 159 (549)
T ss_dssp ECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred ECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCc
Confidence 999999998888889999999999999999987 467889999999999999998555555 578899999999999999
Q ss_pred CCCCCccccccc------------------------cccccccccccccccc----------------------------
Q 005177 209 LNDQIPAELGML------------------------KTVTHMEIGYNFYQGN---------------------------- 236 (710)
Q Consensus 209 l~~~~p~~l~~l------------------------~~L~~L~l~~n~~~g~---------------------------- 236 (710)
+++.+|..++.+ ++|++|++++|.+++.
T Consensus 160 l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 239 (549)
T 2z81_A 160 LRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDES 239 (549)
T ss_dssp CCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHH
T ss_pred ccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhH
Confidence 988877776554 4455555555555441
Q ss_pred --------------------------------------------------------------------------------
Q 005177 237 -------------------------------------------------------------------------------- 236 (710)
Q Consensus 237 -------------------------------------------------------------------------------- 236 (710)
T Consensus 240 ~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~ 319 (549)
T 2z81_A 240 FNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVEN 319 (549)
T ss_dssp HHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEES
T ss_pred HHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEecc
Confidence
Q ss_pred -----CCccc-cCCCccchhccccccCCccCch---hccCCCCCcEEEccccccCCCCC--ccccCCCCCCEEEccCCCC
Q 005177 237 -----IPWQL-GNMSEVQYLDIAGANLSGSIPK---ELSNLTKLESLFLFRNQLAGQVP--WEFSRVTTLKSLDLSDNRL 305 (710)
Q Consensus 237 -----~p~~l-~~l~~L~~L~ls~n~l~g~~p~---~l~~l~~L~~L~L~~n~l~~~~p--~~~~~l~~L~~L~Ls~N~l 305 (710)
+|..+ .++++|++|++++|++++.+|. .++.+++|+.|++++|++++..+ ..+..+++|++|++++|++
T Consensus 320 n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l 399 (549)
T 2z81_A 320 SKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTF 399 (549)
T ss_dssp SCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCC
T ss_pred CccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCC
Confidence 11111 2355566666666666654432 24556666666666666654321 3356666777777777776
Q ss_pred CCCCCccccCCCCCCEEEcccccCcccCCccc------------------CCCCCCcEEeccCCCCCCCCCcccCCCCCC
Q 005177 306 SGPIPESFADLKNLRLLSLMYNEMSGTVPESL------------------VQLPSLEILFIWNNYFSGSLPENLGRNSKL 367 (710)
Q Consensus 306 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~------------------~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L 367 (710)
+ .+|..+..+++|++|++++|++++ +|..+ ..+++|++|+|++|+++ .+|. ...+++|
T Consensus 400 ~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L 475 (549)
T 2z81_A 400 H-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLK-TLPD-ASLFPVL 475 (549)
T ss_dssp C-CCCSCCCCCTTCCEEECTTSCCSC-CCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCS-SCCC-GGGCTTC
T ss_pred c-cCChhhcccccccEEECCCCCccc-ccchhcCCceEEECCCCChhhhcccCChhcEEECCCCccC-cCCC-cccCccC
Confidence 6 466666666666666666666552 22211 24566666666666666 4554 3456677
Q ss_pred cEEECCCCcCCccCcccccCCCceeeEecccCCcccchh
Q 005177 368 RWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 368 ~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~l~g~i~ 406 (710)
+.|++++|++++.+|..+..++.|+.|++++|.+++..|
T Consensus 476 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 476 LVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp CEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred CEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 777777777776666666677777777777777777665
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-39 Score=338.43 Aligned_cols=250 Identities=18% Similarity=0.188 Sum_probs=197.3
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-------hHHHHHHHHHHHhccCCCCceeEEEEEEc
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-------RIKIVSEFITRIGTVRHKNLIRLLGFCYN 512 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-------~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 512 (710)
++.+.|. ..+.||+|+||.||+|.. .+|..||||.+..... ..+.+.+|++++++++|||||++++++.+
T Consensus 8 ~~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 85 (326)
T 2y0a_A 8 NVDDYYD--TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN 85 (326)
T ss_dssp CHHHHEE--EEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred CcccceE--eceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 3444566 778999999999999986 5799999999986422 25678999999999999999999999999
Q ss_pred CCceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC----ceEEccc
Q 005177 513 RHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM----EPHLAEF 586 (710)
Q Consensus 513 ~~~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~----~~kl~Df 586 (710)
++..++||||+++|+|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++ .+||+||
T Consensus 86 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 162 (326)
T 2y0a_A 86 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDF 162 (326)
T ss_dssp SSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred CCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence 9999999999999999999975 468899999999999999999998 999999999999999887 7999999
Q ss_pred CccccccccCC-CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccC
Q 005177 587 GFKYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 665 (710)
Q Consensus 587 Gla~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (710)
|+++....... ....++..|.+||......++.++|||||||++|||+||+.|+.+..... ....+.......
T Consensus 163 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~~~~~~~~~ 236 (326)
T 2y0a_A 163 GLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE------TLANVSAVNYEF 236 (326)
T ss_dssp TTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHHTCCCC
T ss_pred CCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH------HHHHHHhcCCCc
Confidence 99987643221 12224555788898888889999999999999999999999986432111 001111101000
Q ss_pred CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 666 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 666 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
....+......+.+++.+|++.||++|||+.|++++
T Consensus 237 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 237 EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp CHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred CccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000111223457789999999999999999999874
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=350.84 Aligned_cols=242 Identities=19% Similarity=0.232 Sum_probs=193.3
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCC-ceeEEEeecCCCCh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH-QAYLLYDYLPNGNL 528 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-~~~lv~Ey~~~gsL 528 (710)
..+.||+|+||.||+|.. .|+.||||.++... ..+.+.+|++++++++|||||+++++|.+.+ ..++|||||++|+|
T Consensus 197 ~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L 274 (450)
T 1k9a_A 197 LLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 274 (450)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBH
T ss_pred EEeeecCcCCeeEEEEEe-cCCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcH
Confidence 668899999999999987 47899999998654 5667899999999999999999999988765 78999999999999
Q ss_pred hhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCccccc
Q 005177 529 SEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIA 604 (710)
Q Consensus 529 ~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 604 (710)
.++++. ..++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++......... ....
T Consensus 275 ~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~-~~~~ 350 (450)
T 1k9a_A 275 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG-KLPV 350 (450)
T ss_dssp HHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC-------CCCT
T ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCC-CCCc
Confidence 999975 258889999999999999999998 99999999999999999999999999998543222111 1223
Q ss_pred ccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhh
Q 005177 605 WTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 683 (710)
Q Consensus 605 ~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 683 (710)
.+.+||......++.++|||||||++|||+| |+.|+....... ....+........+. .....+.+++.+
T Consensus 351 ~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~------~~~~i~~~~~~~~p~---~~~~~l~~li~~ 421 (450)
T 1k9a_A 351 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD------VVPRVEKGYKMDAPD---GCPPAVYDVMKN 421 (450)
T ss_dssp TTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT------HHHHHHTTCCCCCCT---TCCHHHHHHHHH
T ss_pred ceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCCCCCC---cCCHHHHHHHHH
Confidence 4678888888889999999999999999999 888886432211 111111111011111 122456788999
Q ss_pred cCCCCCCCCCCHHHHHHHHhccC
Q 005177 684 CTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 684 Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
||+.||++|||+.|+++.|+.+.
T Consensus 422 cl~~dp~~Rpt~~~l~~~L~~i~ 444 (450)
T 1k9a_A 422 CWHLDAATRPTFLQLREQLEHIR 444 (450)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HcCCChhHCcCHHHHHHHHHHHH
Confidence 99999999999999999998875
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-39 Score=335.20 Aligned_cols=252 Identities=17% Similarity=0.279 Sum_probs=192.7
Q ss_pred hhhhhcCCCCCccEEEEc-----CCCcEEEEEEeeccch-hHHHHHHHHHHHhccCCCCceeEEEEEEcC--CceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVL-----PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-----~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~E 521 (710)
..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++++++|||||+++++|... ...++|||
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 93 (295)
T 3ugc_A 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 93 (295)
T ss_dssp EEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEE
T ss_pred hhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEE
Confidence 678899999999999973 5789999999986433 356789999999999999999999999664 46899999
Q ss_pred ecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC
Q 005177 522 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 598 (710)
Q Consensus 522 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 598 (710)
|+++|+|.+++.. ..++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 170 (295)
T 3ugc_A 94 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEF 170 (295)
T ss_dssp CCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC--------
T ss_pred eCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcccccccCCcce
Confidence 9999999999965 478999999999999999999998 9999999999999999999999999999865432111
Q ss_pred -----CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCC---------CCcccc-cccccccccccc
Q 005177 599 -----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSS---------LQNKPI-DGLLGEMYNENE 663 (710)
Q Consensus 599 -----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~---------~~~~~~-~~~~~~~~~~~~ 663 (710)
...+..++.+||......++.++|||||||++|||+||..|+..... ...... ............
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (295)
T 3ugc_A 171 FKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 250 (295)
T ss_dssp -----CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCC
T ss_pred eeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCc
Confidence 11133346788888888899999999999999999999888752110 000000 000001111110
Q ss_pred cCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 664 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 664 ~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
...+. .....+.+++.+||+.||++|||+.|+++.|+.+++
T Consensus 251 ~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 251 LPRPD---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp CCCCT---TCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCc---CcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 11111 223457789999999999999999999999988753
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=342.38 Aligned_cols=242 Identities=19% Similarity=0.149 Sum_probs=189.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
..+.||+|+||.||+|.. .+|+.||||.++... ...+.+.+|++++++++|||||++++++.+++..++||||+++|+
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 457899999999999985 679999999998653 346778999999999999999999999999999999999999999
Q ss_pred hhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe--cCCCceEEcccCccccccccCCC-Ccc
Q 005177 528 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF--DENMEPHLAEFGFKYLTQLADGS-FPA 601 (710)
Q Consensus 528 L~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl--~~~~~~kl~DfGla~~~~~~~~~-~~~ 601 (710)
|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+|||+ +.++.+||+|||+++........ ...
T Consensus 173 L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~ 249 (373)
T 2x4f_A 173 LFDRIIDESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF 249 (373)
T ss_dssp EHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCC
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccccccc
Confidence 9998854 478999999999999999999998 99999999999999 56789999999999865432211 122
Q ss_pred cccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHH
Q 005177 602 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 681 (710)
Q Consensus 602 ~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 681 (710)
++..|.+||+.....++.++|||||||++|||+||+.||.+..... ....+....+......+......+.+++
T Consensus 250 gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~------~~~~i~~~~~~~~~~~~~~~~~~~~~li 323 (373)
T 2x4f_A 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE------TLNNILACRWDLEDEEFQDISEEAKEFI 323 (373)
T ss_dssp SSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHHTCCCSCSGGGTTSCHHHHHHH
T ss_pred CCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhccCCCChhhhccCCHHHHHHH
Confidence 4556788898888888999999999999999999999987443211 0111111110111111122235677899
Q ss_pred hhcCCCCCCCCCCHHHHHH
Q 005177 682 LLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 682 ~~Cl~~~p~~RPs~~evl~ 700 (710)
.+|++.||++|||+.|+++
T Consensus 324 ~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 324 SKLLIKEKSWRISASEALK 342 (373)
T ss_dssp HTTSCSSGGGSCCHHHHHH
T ss_pred HHHcCCChhhCCCHHHHhc
Confidence 9999999999999999987
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-39 Score=329.74 Aligned_cols=247 Identities=21% Similarity=0.226 Sum_probs=185.7
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccch-----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT-----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~-----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|.. .|..||||.++.... ..+.+.+|++++++++||||+++++++.+++..++||||++
T Consensus 11 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (271)
T 3dtc_A 11 LEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFAR 89 (271)
T ss_dssp EEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCT
T ss_pred eeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCC
Confidence 678999999999999997 489999999875422 24678899999999999999999999999999999999999
Q ss_pred CCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC--------CCceEEcccCcccccccc
Q 005177 525 NGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE--------NMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 525 ~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~--------~~~~kl~DfGla~~~~~~ 595 (710)
+|+|.+++.. ..++.....++.|+++||+|||+....+|+||||||+||+++. ++.+||+|||+++.....
T Consensus 90 ~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~ 169 (271)
T 3dtc_A 90 GGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT 169 (271)
T ss_dssp TEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-------
T ss_pred CCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccccccc
Confidence 9999999865 5789999999999999999999983334999999999999986 678999999999765433
Q ss_pred CCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHH
Q 005177 596 DGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 675 (710)
Q Consensus 596 ~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (710)
......+...+.+||......++.++||||||+++|||+||+.|+........ .......... ...+. ....
T Consensus 170 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~--~~~~~~~~~~---~~~~~---~~~~ 241 (271)
T 3dtc_A 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV--AYGVAMNKLA---LPIPS---TCPE 241 (271)
T ss_dssp ------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH--HHHHHTSCCC---CCCCT---TCCH
T ss_pred cccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHhhhcCCCC---CCCCc---ccCH
Confidence 22222344557788988888899999999999999999999999874321110 0000000000 00011 1124
Q ss_pred HHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 676 LVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 676 ~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
.+.+++.+|++.||++|||+.|++++|+++
T Consensus 242 ~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 242 PFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred HHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 577889999999999999999999999865
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-39 Score=333.08 Aligned_cols=250 Identities=18% Similarity=0.190 Sum_probs=195.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc----chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~----~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|.. .+|+.||||.+... ....+.+.+|++.+.+++||||+++++++.+++..++||||++
T Consensus 15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 94 (294)
T 4eqm_A 15 IVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIE 94 (294)
T ss_dssp EEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCC
Confidence 778999999999999985 67899999998653 2235678899999999999999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC---C
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS---F 599 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~---~ 599 (710)
+|+|.+++.. .+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ .
T Consensus 95 g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 171 (294)
T 4eqm_A 95 GPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNH 171 (294)
T ss_dssp SCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC----------
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccccccccccCc
Confidence 9999999975 578999999999999999999998 9999999999999999999999999999765432111 1
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 679 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (710)
..++..|.+||......++.++||||+||++|||+||+.||.+...... ... .............. .+....+.+
T Consensus 172 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-~~~-~~~~~~~~~~~~~~---~~~~~~l~~ 246 (294)
T 4eqm_A 172 VLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI-AIK-HIQDSVPNVTTDVR---KDIPQSLSN 246 (294)
T ss_dssp ---CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHH-HHH-HHSSCCCCHHHHSC---TTSCHHHHH
T ss_pred cccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-HHH-HhhccCCCcchhcc---cCCCHHHHH
Confidence 1244557888988888889999999999999999999999875432110 000 00000000000000 112245678
Q ss_pred HHhhcCCCCCCCCC-CHHHHHHHHhccCC
Q 005177 680 VALLCTRSTPSDRP-SMEEALKLLSGLKP 707 (710)
Q Consensus 680 l~~~Cl~~~p~~RP-s~~evl~~L~~~~~ 707 (710)
++.+|++.||++|| +++++.+.|+.+..
T Consensus 247 li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 247 VILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp HHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred HHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 89999999999998 89999999987753
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=342.61 Aligned_cols=245 Identities=16% Similarity=0.169 Sum_probs=192.5
Q ss_pred hhhhhcCCCCCccEEEEc------CCCcEEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
..+.||+|+||.||+|.. .++..||||+++.. ......+.+|+.++++++|||||++++++.+++..++|||
T Consensus 75 ~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 154 (367)
T 3l9p_A 75 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLE 154 (367)
T ss_dssp EEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEE
Confidence 678899999999999984 35779999999753 2345578889999999999999999999999999999999
Q ss_pred ecCCCChhhhhhc---------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC---ceEEcccCcc
Q 005177 522 YLPNGNLSEKIRT---------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM---EPHLAEFGFK 589 (710)
Q Consensus 522 y~~~gsL~~~l~~---------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~---~~kl~DfGla 589 (710)
|+++|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+|||++.++ .+||+|||++
T Consensus 155 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a 231 (367)
T 3l9p_A 155 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231 (367)
T ss_dssp CCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECCCHHH
T ss_pred eCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEECCCccc
Confidence 9999999999964 368899999999999999999999 999999999999999555 5999999999
Q ss_pred ccccccCC----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccccccccc
Q 005177 590 YLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEV 664 (710)
Q Consensus 590 ~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (710)
+....... ....++..|.+||......++.++|||||||++|||+| |+.|+....... ....+......
T Consensus 232 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~------~~~~i~~~~~~ 305 (367)
T 3l9p_A 232 RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE------VLEFVTSGGRM 305 (367)
T ss_dssp HHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH------HHHHHHTTCCC
T ss_pred cccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCC
Confidence 75432211 11123445778898888889999999999999999998 888876432110 11111111101
Q ss_pred CCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 665 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 665 ~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
..+. .....+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 306 ~~~~---~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~ 344 (367)
T 3l9p_A 306 DPPK---NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 344 (367)
T ss_dssp CCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCc---cCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 1111 11245678999999999999999999999998764
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-38 Score=347.55 Aligned_cols=250 Identities=17% Similarity=0.136 Sum_probs=196.5
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCce
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 516 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 516 (710)
.+.+.|. ..+.||+|+||.||+|.. .+|+.||+|.+.... ...+.+.+|++++++++|||||++++++.+++..
T Consensus 8 ~~~~~Y~--i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 85 (444)
T 3soa_A 8 RFTEEYQ--LFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHH 85 (444)
T ss_dssp HHHHHEE--EEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEE
T ss_pred cccCCeE--EEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEE
Confidence 4455566 778999999999999984 789999999998643 2356688999999999999999999999999999
Q ss_pred eEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec---CCCceEEcccCcccc
Q 005177 517 YLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD---ENMEPHLAEFGFKYL 591 (710)
Q Consensus 517 ~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~---~~~~~kl~DfGla~~ 591 (710)
++||||+++|+|.+.+.. ..++.....++.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+++.
T Consensus 86 ~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~ 162 (444)
T 3soa_A 86 YLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIE 162 (444)
T ss_dssp EEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBC
T ss_pred EEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEE
Confidence 999999999999998865 568889999999999999999999 999999999999998 457899999999976
Q ss_pred ccccCCC--CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcc
Q 005177 592 TQLADGS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSS 669 (710)
Q Consensus 592 ~~~~~~~--~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (710)
....... ...++.+|.+||......++.++||||+||++|||++|+.||.+..... ....+.........+.
T Consensus 163 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~------~~~~i~~~~~~~~~~~ 236 (444)
T 3soa_A 163 VEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR------LYQQIKAGAYDFPSPE 236 (444)
T ss_dssp CCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHTCCCCCTTT
T ss_pred ecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHH------HHHHHHhCCCCCCccc
Confidence 5432211 1224566888999888889999999999999999999999986433211 0111111110011111
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 670 LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 670 ~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+......+.+++.+|++.||++|||+.|++++
T Consensus 237 ~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 237 WDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp TTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 12233567789999999999999999999873
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-38 Score=331.88 Aligned_cols=255 Identities=17% Similarity=0.205 Sum_probs=192.9
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEEcCCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCcee
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 517 (710)
.+.+.|. ..+.||+|+||.||+|...+|+.||||++..... ..+.+.+|++++++++|||||++++++.+++..+
T Consensus 18 ~l~~~y~--~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 95 (311)
T 3niz_A 18 GLMEKYQ--KLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLT 95 (311)
T ss_dssp CSSCEEE--EEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEE
T ss_pred chHhhhH--hhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEE
Confidence 3455666 7889999999999999988899999999975432 2467889999999999999999999999999999
Q ss_pred EEEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccc
Q 005177 518 LLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 594 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~ 594 (710)
+||||++ |+|.+.+.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 96 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 171 (311)
T 3niz_A 96 LVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGI 171 (311)
T ss_dssp EEEECCS-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred EEEcCCC-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence 9999998 588888765 368889999999999999999998 999999999999999999999999999986542
Q ss_pred cCCC--CcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc---------------cccccccc
Q 005177 595 ADGS--FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPIDGLLG 656 (710)
Q Consensus 595 ~~~~--~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~---------------~~~~~~~~ 656 (710)
.... ...+..+|.+||.... ..++.++||||+||++|||+||+.||.+...... |.......
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 251 (311)
T 3niz_A 172 PVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELP 251 (311)
T ss_dssp CCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSH
T ss_pred CcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccc
Confidence 2211 1123455778887755 5679999999999999999999999874332211 00000000
Q ss_pred ccccccc-cCCCcch----HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 657 EMYNENE-VGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 657 ~~~~~~~-~~~~~~~----~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
...+... ....... .....++.+++.+|++.||++|||++|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 252 LWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0000000 0000001 1123467899999999999999999999874
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-38 Score=336.16 Aligned_cols=242 Identities=12% Similarity=0.082 Sum_probs=194.0
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
+|. ..+.||+|+||.||+|.. .+|+.||||.++... ...+.+.+|++++++++||||+++++++.+.+..|+|
T Consensus 6 ~y~--~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 6 DFD--YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred HeE--EEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 355 678999999999999985 579999999998642 2356688899999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
|||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 84 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence 999999999999865 568889999999999999999998 999999999999999999999999999975322211
Q ss_pred --CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHH
Q 005177 598 --SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 675 (710)
Q Consensus 598 --~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (710)
....++..|.+||......++.++||||+||++|||+||+.||.+..... ....+.... ...+.. ...
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~------~~~~i~~~~-~~~p~~---~s~ 230 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER------LFELILMEE-IRFPRT---LSP 230 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-CCCCTT---SCH
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHH------HHHHHHcCC-CCCCCC---CCH
Confidence 12224556788898888889999999999999999999999986432110 111111111 111111 224
Q ss_pred HHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 005177 676 LVLDVALLCTRSTPSDRP-----SMEEALKL 701 (710)
Q Consensus 676 ~~~~l~~~Cl~~~p~~RP-----s~~evl~~ 701 (710)
.+.+++.+|++.||++|| +++|++++
T Consensus 231 ~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 231 EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp HHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred HHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 567888999999999999 89998764
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=365.54 Aligned_cols=321 Identities=20% Similarity=0.256 Sum_probs=276.7
Q ss_pred CcEEEEEcCCCCCcc-----------------cCCcchh--hhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCC
Q 005177 75 TIVVGINLSMKGLSG-----------------ALPGKPL--RIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRN 135 (710)
Q Consensus 75 ~~v~~l~l~~~~l~g-----------------~~~~~~~--~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 135 (710)
..+..++++++.++| .+|+.++ . +++|++|+|++|.+.+.+|..|+++++|++|+|++|
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~--L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N 525 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSN--LKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACN 525 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGG--CTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTC
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCChhhhhcc--CCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCC
Confidence 357889999999999 4898887 7 999999999999999999999999999999999999
Q ss_pred C-CCC-CCChhhcCCC-------CCCEEECCCCCCCcCCch--hccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEe
Q 005177 136 N-FSG-HFPGGIQSLR-------NLLVLDAFSNSFSGSVPA--EISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHL 204 (710)
Q Consensus 136 ~-l~~-~~p~~l~~L~-------~L~~L~L~~N~l~~~~p~--~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 204 (710)
+ ++| .+|..+++++ +|++|+|++|.++ .+|. .++++++|++|+|++|+++ .+| .|+++++|+.|+|
T Consensus 526 ~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~L 602 (876)
T 4ecn_A 526 RGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKL 602 (876)
T ss_dssp TTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEEC
T ss_pred CCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEEC
Confidence 8 998 8998887766 9999999999999 8998 9999999999999999999 888 8999999999999
Q ss_pred cCCcCCCCCccccccccc-ccccccccccccccCCccccCCCc--cchhccccccCCccCchh---cc--CCCCCcEEEc
Q 005177 205 AGNLLNDQIPAELGMLKT-VTHMEIGYNFYQGNIPWQLGNMSE--VQYLDIAGANLSGSIPKE---LS--NLTKLESLFL 276 (710)
Q Consensus 205 ~~N~l~~~~p~~l~~l~~-L~~L~l~~n~~~g~~p~~l~~l~~--L~~L~ls~n~l~g~~p~~---l~--~l~~L~~L~L 276 (710)
++|.++ .+|..+..+++ |+.|++++|.++ .+|..+..++. |+.|++++|++++.+|.. +. .+++|+.|+|
T Consensus 603 s~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~L 680 (876)
T 4ecn_A 603 DYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTL 680 (876)
T ss_dssp CSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEEC
T ss_pred cCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEc
Confidence 999998 89999999999 999999999998 78888877654 999999999998876642 22 3458889999
Q ss_pred cccccCCCCCccc-cCCCCCCEEEccCCCCCCCCCccccCC--------CCCCEEEcccccCcccCCcccC--CCCCCcE
Q 005177 277 FRNQLAGQVPWEF-SRVTTLKSLDLSDNRLSGPIPESFADL--------KNLRLLSLMYNEMSGTVPESLV--QLPSLEI 345 (710)
Q Consensus 277 ~~n~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l--------~~L~~L~Ls~N~l~g~~p~~~~--~l~~L~~ 345 (710)
++|.++ .+|..+ ..+++|+.|+|++|+++ .+|..+... ++|+.|+|++|+++ .+|..+. .+++|+.
T Consensus 681 s~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~ 757 (876)
T 4ecn_A 681 SYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSN 757 (876)
T ss_dssp CSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCE
T ss_pred cCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCE
Confidence 999988 455544 47888999999999888 566544332 38889999999888 6788876 8889999
Q ss_pred EeccCCCCCCCCCcccCCCCCCcEEECCC------CcCCccCcccccCCCceeeEecccCCcccchhH
Q 005177 346 LFIWNNYFSGSLPENLGRNSKLRWVDVST------NNFNGSIPPDICSGGVLFKLILFSNNFTGIVMF 407 (710)
Q Consensus 346 L~L~~N~l~g~~p~~l~~~~~L~~L~ls~------N~l~g~ip~~~~~~~~L~~l~l~~N~l~g~i~~ 407 (710)
|+|++|.+++ +|..+..+++|+.|++++ |++.+.+|..+..+++|+.|++++|++ +.+|.
T Consensus 758 L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~ 823 (876)
T 4ecn_A 758 MDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDE 823 (876)
T ss_dssp EECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCS
T ss_pred EEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCH
Confidence 9999998887 788888888899998866 778888888888888899999998888 66663
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-39 Score=342.91 Aligned_cols=250 Identities=20% Similarity=0.218 Sum_probs=195.5
Q ss_pred hcCCchhhhhhcCCCCCccEEEE------cCCCcEEEEEEeeccc--hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCC
Q 005177 444 RSFNSTECEEAARPQSAAGCKAV------LPTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRH 514 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~------~~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~ 514 (710)
+.|. ..+.||+|+||.||+|. ..+|+.||||+++... ...+.+.+|++++.++ +|||||+++++|.+.+
T Consensus 22 ~~y~--~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 99 (359)
T 3vhe_A 22 DRLK--LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 99 (359)
T ss_dssp GGEE--EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred ccee--eceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCC
Confidence 3455 77899999999999996 3567899999998643 2356789999999999 7899999999998865
Q ss_pred -ceeEEEeecCCCChhhhhhcC----------------------------------------------------------
Q 005177 515 -QAYLLYDYLPNGNLSEKIRTK---------------------------------------------------------- 535 (710)
Q Consensus 515 -~~~lv~Ey~~~gsL~~~l~~~---------------------------------------------------------- 535 (710)
..++||||+++|+|.++++..
T Consensus 100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (359)
T 3vhe_A 100 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 179 (359)
T ss_dssp SCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------------
T ss_pred CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhc
Confidence 489999999999999999652
Q ss_pred ----------CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC----Ccc
Q 005177 536 ----------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS----FPA 601 (710)
Q Consensus 536 ----------~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~----~~~ 601 (710)
+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ ...
T Consensus 180 ~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 256 (359)
T 3vhe_A 180 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 256 (359)
T ss_dssp ----CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CE
T ss_pred ccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccC
Confidence 67888899999999999999999 9999999999999999999999999999865322111 112
Q ss_pred cccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHH
Q 005177 602 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 680 (710)
Q Consensus 602 ~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 680 (710)
+...|.+||......++.++|||||||++|||+| |+.|+.+...... .. ..+........+. .....+.++
T Consensus 257 ~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-~~----~~~~~~~~~~~~~---~~~~~l~~l 328 (359)
T 3vhe_A 257 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FC----RRLKEGTRMRAPD---YTTPEMYQT 328 (359)
T ss_dssp ECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-HH----HHHHHTCCCCCCT---TCCHHHHHH
T ss_pred CCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH-HH----HHHHcCCCCCCCC---CCCHHHHHH
Confidence 3345778898888889999999999999999999 8888864332111 00 0000100011111 112457788
Q ss_pred HhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 681 ALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 681 ~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
+.+||+.||++||||.|++++|+.+.
T Consensus 329 i~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 329 MLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHccCChhhCCCHHHHHHHHHHHH
Confidence 99999999999999999999998763
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=351.42 Aligned_cols=245 Identities=17% Similarity=0.216 Sum_probs=194.0
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.||+|+||.||+|....+..||||.++......+.+.+|++++++++|||||++++++.+ +..++|||||++|+|.
T Consensus 188 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~ 266 (452)
T 1fmk_A 188 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 266 (452)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHH
T ss_pred eeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHH
Confidence 667899999999999998888899999998765566789999999999999999999999876 6789999999999999
Q ss_pred hhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC---ccc
Q 005177 530 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---PAK 602 (710)
Q Consensus 530 ~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~---~~~ 602 (710)
++++. ..++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++......... ...
T Consensus 267 ~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~ 343 (452)
T 1fmk_A 267 DFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 343 (452)
T ss_dssp HHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC--------------C
T ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCcc
Confidence 99974 478999999999999999999998 99999999999999999999999999998654221111 112
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHH
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 681 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 681 (710)
...+.+||......++.++|||||||++|||+| |+.|+.+..... ....+........+. .....+.+++
T Consensus 344 ~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~------~~~~i~~~~~~~~~~---~~~~~l~~li 414 (452)
T 1fmk_A 344 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE------VLDQVERGYRMPCPP---ECPESLHDLM 414 (452)
T ss_dssp CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH------HHHHHHTTCCCCCCT---TSCHHHHHHH
T ss_pred cccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCCCCCC---CCCHHHHHHH
Confidence 233677888888889999999999999999999 888876432111 111111111011111 1234567889
Q ss_pred hhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 682 LLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 682 ~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
.+||+.||++|||++++++.|+.+..
T Consensus 415 ~~cl~~dP~~Rpt~~~l~~~L~~~~~ 440 (452)
T 1fmk_A 415 CQCWRKEPEERPTFEYLQAFLEDYFT 440 (452)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred HHHccCChhhCcCHHHHHHHHHHHhc
Confidence 99999999999999999999998753
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-38 Score=334.65 Aligned_cols=262 Identities=19% Similarity=0.229 Sum_probs=190.5
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcC----Cce
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR----HQA 516 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~----~~~ 516 (710)
.+.+.|. ..+.||+|+||.||+|... |+.||||++............|+.....++||||+++++++... +..
T Consensus 34 ~~~~~y~--~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 110 (337)
T 3mdy_A 34 TIAKQIQ--MVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQL 110 (337)
T ss_dssp THHHHCE--EEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEE
T ss_pred ccccceE--EEeEeecCCCeEEEEEEEC-CceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCce
Confidence 3445677 8899999999999999874 89999999975443332233333333445899999999999887 678
Q ss_pred eEEEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCC-----CCCceecCCCCCCeEecCCCceEEcccCccc
Q 005177 517 YLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDC-----YPAIPHGDLKASNIVFDENMEPHLAEFGFKY 590 (710)
Q Consensus 517 ~lv~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~-----~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~ 590 (710)
++||||+++|+|.++++. .+++..+..++.|++.||+|||+.+ .++|+||||||+||+++.++.+||+|||+++
T Consensus 111 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~ 190 (337)
T 3mdy_A 111 YLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 190 (337)
T ss_dssp EEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCce
Confidence 999999999999999975 5789999999999999999999863 4589999999999999999999999999987
Q ss_pred cccccCCC------CcccccccCchhhhhccCCccc------cceeeHHHHHHHHHhCCCC----------CCCCCCCCc
Q 005177 591 LTQLADGS------FPAKIAWTESGEFYNAMKEEMY------MDVYGFGEIILEILTNGRL----------TNAGSSLQN 648 (710)
Q Consensus 591 ~~~~~~~~------~~~~~~~~~~~e~~~~~~~~~~------~DVySfGvvl~Elltg~~p----------~~~~~~~~~ 648 (710)
........ ...++..|.+||.......+.+ +|||||||++|||+||+.| +........
T Consensus 191 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~ 270 (337)
T 3mdy_A 191 KFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDP 270 (337)
T ss_dssp ECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred eeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCC
Confidence 54322111 1124455778888766555444 8999999999999999544 332111000
Q ss_pred cccccccccccccccc--CCCc--chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 649 KPIDGLLGEMYNENEV--GSSS--SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 649 ~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
... ........... ..+. ...+....+.+++.+||+.||++|||+.|++++|+.+.+
T Consensus 271 -~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 331 (337)
T 3mdy_A 271 -SYE-DMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE 331 (337)
T ss_dssp -CHH-HHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -chh-hhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence 000 00000000000 0011 112456678899999999999999999999999998754
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=326.27 Aligned_cols=247 Identities=20% Similarity=0.263 Sum_probs=199.1
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.||+|+||.||+|...++..||||.+.......+.+.+|++++++++||||+++++++.+++..++||||+++|+|.
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (267)
T 3t9t_A 12 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLS 91 (267)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHH
T ss_pred eeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHH
Confidence 66889999999999999888999999999876656678999999999999999999999999999999999999999999
Q ss_pred hhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC---CCCcccc
Q 005177 530 EKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD---GSFPAKI 603 (710)
Q Consensus 530 ~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~---~~~~~~~ 603 (710)
+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...... .......
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 168 (267)
T 3t9t_A 92 DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP 168 (267)
T ss_dssp HHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCC
T ss_pred HHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccccccccccccc
Confidence 99975 368999999999999999999998 99999999999999999999999999987653211 1111122
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
..+.+||......++.++||||||+++|||+| |+.|+....... ....+........+.. ....+.+++.
T Consensus 169 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~------~~~~i~~~~~~~~~~~---~~~~l~~li~ 239 (267)
T 3t9t_A 169 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE------VVEDISTGFRLYKPRL---ASTHVYQIMN 239 (267)
T ss_dssp GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHHHTTCCCCCCTT---SCHHHHHHHH
T ss_pred ccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH------HHHHHhcCCcCCCCcc---CcHHHHHHHH
Confidence 34678888888888999999999999999999 787776432110 0111111100110111 1245678899
Q ss_pred hcCCCCCCCCCCHHHHHHHHhccCCC
Q 005177 683 LCTRSTPSDRPSMEEALKLLSGLKPH 708 (710)
Q Consensus 683 ~Cl~~~p~~RPs~~evl~~L~~~~~~ 708 (710)
+|++.||++|||+.|++++|+++.+.
T Consensus 240 ~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 240 HCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHccCChhhCcCHHHHHHHHHHHHhc
Confidence 99999999999999999999988654
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-38 Score=329.84 Aligned_cols=254 Identities=13% Similarity=0.106 Sum_probs=195.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCC--ceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH--QAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~--~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|++++++++|||||++++++...+ ..++||||++
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (319)
T 4euu_A 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (319)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCT
T ss_pred EEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCC
Confidence 678899999999999986 569999999998643 23567789999999999999999999998765 7799999999
Q ss_pred CCChhhhhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe----cCCCceEEcccCcccccccc
Q 005177 525 NGNLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF----DENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 525 ~gsL~~~l~~-----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl----~~~~~~kl~DfGla~~~~~~ 595 (710)
+|+|.+++.. .+++.++..++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||+++.....
T Consensus 93 ~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~ 169 (319)
T 4euu_A 93 CGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (319)
T ss_dssp TCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTT
T ss_pred CCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCC
Confidence 9999999975 278999999999999999999999 99999999999999 78888999999999875432
Q ss_pred CCC-CcccccccCchhhhh--------ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc--cccccc--------c
Q 005177 596 DGS-FPAKIAWTESGEFYN--------AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK--PIDGLL--------G 656 (710)
Q Consensus 596 ~~~-~~~~~~~~~~~e~~~--------~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~--~~~~~~--------~ 656 (710)
... ...+...|.+||... ...++.++|||||||++|||+||+.||......... ...... .
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (319)
T 4euu_A 170 EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAIS 249 (319)
T ss_dssp CCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCE
T ss_pred CceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccch
Confidence 221 112344577788765 467888999999999999999999998632211100 000000 0
Q ss_pred -------ccc--cccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 657 -------EMY--NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 657 -------~~~--~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
..+ .+...............+.+++.+|++.||++|||++|+++...+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 250 GVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp EEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred hhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 000 00000011122445566788999999999999999999999886543
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=340.26 Aligned_cols=249 Identities=17% Similarity=0.179 Sum_probs=196.6
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCcee
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 517 (710)
+.+.|. ..+.||+|+||.||+|.. .+|..||||.+.... ...+.+.+|++++++++|||||++++++.+++..|
T Consensus 27 ~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 104 (362)
T 2bdw_A 27 FSDNYD--VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY 104 (362)
T ss_dssp HHHHEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cccCeE--EeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence 344566 778999999999999985 679999999998642 23567889999999999999999999999999999
Q ss_pred EEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC---CceEEcccCccccc
Q 005177 518 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN---MEPHLAEFGFKYLT 592 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~---~~~kl~DfGla~~~ 592 (710)
+||||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+|||++.+ +.+||+|||+++..
T Consensus 105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~ 181 (362)
T 2bdw_A 105 LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181 (362)
T ss_dssp EEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred EEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence 99999999999998865 468899999999999999999999 99999999999999865 45999999999765
Q ss_pred cccCC-CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchH
Q 005177 593 QLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 671 (710)
Q Consensus 593 ~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (710)
..... ....++.+|.+||+.....++.++|||||||++|||+||+.||.+..... ....+.........+.+.
T Consensus 182 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~------~~~~i~~~~~~~~~~~~~ 255 (362)
T 2bdw_A 182 NDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR------LYAQIKAGAYDYPSPEWD 255 (362)
T ss_dssp TTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTCCCCCTTGGG
T ss_pred cCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhCCCCCCccccc
Confidence 43221 11224556788898888889999999999999999999999986433111 011111111011111222
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 672 DEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 672 ~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.....+.+++.+|++.||++|||+.|++++
T Consensus 256 ~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 256 TVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp GSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 234567789999999999999999998764
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-38 Score=335.17 Aligned_cols=243 Identities=16% Similarity=0.210 Sum_probs=190.2
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCC-----
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----- 514 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----- 514 (710)
.+.|. ..+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|++++++++|||||+++++|.+.+
T Consensus 5 ~~~y~--~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 82 (332)
T 3qd2_B 5 LTDFE--PIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ 82 (332)
T ss_dssp HHHEE--EEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred hhcCc--eeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence 34455 778999999999999996 489999999998533 34677899999999999999999999986643
Q ss_pred ----------------------------------------------------ceeEEEeecCCCChhhhhhc-----CCC
Q 005177 515 ----------------------------------------------------QAYLLYDYLPNGNLSEKIRT-----KRD 537 (710)
Q Consensus 515 ----------------------------------------------------~~~lv~Ey~~~gsL~~~l~~-----~~~ 537 (710)
..++||||+++|+|.+++.. ...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~ 162 (332)
T 3qd2_B 83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDRE 162 (332)
T ss_dssp HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSC
T ss_pred hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchh
Confidence 27999999999999999976 345
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--------------CCcccc
Q 005177 538 WAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--------------SFPAKI 603 (710)
Q Consensus 538 ~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--------------~~~~~~ 603 (710)
+..+.+++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....++
T Consensus 163 ~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt 239 (332)
T 3qd2_B 163 HGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT 239 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred hHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence 677899999999999999998 999999999999999999999999999886543211 111244
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 683 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 683 (710)
..|.+||......++.++|||||||++|||++|..|+..... ........ ..+.........+.+++.+
T Consensus 240 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~--------~~~~~~~~---~~~~~~~~~~~~~~~li~~ 308 (332)
T 3qd2_B 240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR--------IITDVRNL---KFPLLFTQKYPQEHMMVQD 308 (332)
T ss_dssp GGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHH--------HHHHHHTT---CCCHHHHHHCHHHHHHHHH
T ss_pred cCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHH--------HHHHhhcc---CCCcccccCChhHHHHHHH
Confidence 557888988888899999999999999999998665421110 00111111 1122233445667889999
Q ss_pred cCCCCCCCCCCHHHHHHH
Q 005177 684 CTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 684 Cl~~~p~~RPs~~evl~~ 701 (710)
|++.||++|||+.|++++
T Consensus 309 ~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 309 MLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHCSSGGGSCCHHHHHHS
T ss_pred HccCCCCcCCCHHHHhhc
Confidence 999999999999999874
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=336.09 Aligned_cols=244 Identities=16% Similarity=0.233 Sum_probs=188.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCc----EEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGI----TVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~----~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
..+.||+|+||.||+|.. .+|+ .||+|.+.... ...+.+.+|++++++++|||||+++++|.+++ .++||||
T Consensus 19 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~e~ 97 (327)
T 3poz_A 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQL 97 (327)
T ss_dssp EEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEEEEC
T ss_pred cceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEEEe
Confidence 778999999999999984 4554 46888886432 33577899999999999999999999998754 7899999
Q ss_pred cCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC
Q 005177 523 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 599 (710)
Q Consensus 523 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 599 (710)
+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 98 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 174 (327)
T 3poz_A 98 MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174 (327)
T ss_dssp CTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC--
T ss_pred cCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccCCcccc
Confidence 999999999965 468999999999999999999998 99999999999999999999999999998654322111
Q ss_pred ----cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccccccc-ccCCCcchHHH
Q 005177 600 ----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNEN-EVGSSSSLQDE 673 (710)
Q Consensus 600 ----~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 673 (710)
..+...|.+||......++.++|||||||++|||+| |+.|+....... ..+..... ....+. ..
T Consensus 175 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~---~~ 244 (327)
T 3poz_A 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGERLPQPP---IC 244 (327)
T ss_dssp -----CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-------HHHHHHTTCCCCCCT---TB
T ss_pred cccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH-------HHHHHHcCCCCCCCc---cC
Confidence 112334778898888889999999999999999999 888886432111 01111110 011111 12
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
...+.+++.+||+.||++||+|.|++++|+.+.+
T Consensus 245 ~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 245 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp CHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 3457789999999999999999999999987643
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=339.90 Aligned_cols=248 Identities=17% Similarity=0.129 Sum_probs=183.3
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
.+.|. ..+.||+|+||.||+|.. .+++.||||+++... ..+.+.+|++++++++|||||+++++|.+++..++|||
T Consensus 52 ~~~y~--~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 52 SDFFE--VESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGTEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cCcEE--EeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 34455 678999999999999986 468899999998543 45668889999999999999999999999999999999
Q ss_pred ecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC---CCceEEcccCccccccccC
Q 005177 522 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 522 y~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~---~~~~kl~DfGla~~~~~~~ 596 (710)
|+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++......
T Consensus 129 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 205 (349)
T 2w4o_A 129 LVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV 205 (349)
T ss_dssp CCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred eCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCccc
Confidence 9999999999975 468899999999999999999998 9999999999999975 8899999999998654321
Q ss_pred C-CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHH
Q 005177 597 G-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 675 (710)
Q Consensus 597 ~-~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (710)
. ....++..|.+||+.....++.++|||||||++|||+||+.|+.+...... . ...+.........+...+...
T Consensus 206 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~----~~~i~~~~~~~~~~~~~~~~~ 280 (349)
T 2w4o_A 206 LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF-M----FRRILNCEYYFISPWWDEVSL 280 (349)
T ss_dssp -------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH-H----HHHHHTTCCCCCTTTTTTSCH
T ss_pred ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH-H----HHHHHhCCCccCCchhhhCCH
Confidence 1 112244557888988888899999999999999999999999875432110 0 111111110000111122334
Q ss_pred HHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 676 LVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 676 ~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+.+++.+|++.||++|||+.|+++.
T Consensus 281 ~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 281 NAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 67789999999999999999999874
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-38 Score=339.20 Aligned_cols=244 Identities=15% Similarity=0.168 Sum_probs=193.1
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch------hHHHHHHHHHHHhccCCCCceeEEEEEEcCCcee
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT------RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~------~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 517 (710)
.|. ..+.||+|+||.||+|.. .+|+.||||.+..... ..+.+.+|++++++++|||||++++++.+++..|
T Consensus 25 ~y~--~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 25 VYE--LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ceE--EeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 455 778999999999999985 6799999999975321 3567899999999999999999999999999999
Q ss_pred EEEeecCCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc---eEEcccCc
Q 005177 518 LLYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME---PHLAEFGF 588 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~---~kl~DfGl 588 (710)
+|||||++|+|.+.+.. ..++.....++.|+++||+|||+. +|+||||||+|||++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 99999999999988754 368889999999999999999998 9999999999999987654 99999999
Q ss_pred cccccccCC--CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCC
Q 005177 589 KYLTQLADG--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS 666 (710)
Q Consensus 589 a~~~~~~~~--~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (710)
++....... ....++.+|.+||......++.++||||+||++|||+||+.|+.+... .....+........
T Consensus 180 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~i~~~~~~~~ 252 (351)
T 3c0i_A 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-------RLFEGIIKGKYKMN 252 (351)
T ss_dssp CEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH-------HHHHHHHHTCCCCC
T ss_pred eeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH-------HHHHHHHcCCCCCC
Confidence 976543221 112245567888998888889999999999999999999999874321 01111111110000
Q ss_pred CcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 667 SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 667 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
+..+......+.+++.+|++.||++|||+.|+++
T Consensus 253 ~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 253 PRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1111122356778999999999999999999986
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-38 Score=336.22 Aligned_cols=250 Identities=21% Similarity=0.249 Sum_probs=198.2
Q ss_pred hcCCchhhhhhcCCCCCccEEEEcC------CCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCc
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVLP------TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ 515 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~~------~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 515 (710)
+.|. ..+.||+|+||.||+|... +++.||||.++... ...+.+.+|++++++++||||++++++|.+++.
T Consensus 47 ~~~~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 124 (343)
T 1luf_A 47 NNIE--YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP 124 (343)
T ss_dssp GGCE--EEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred HHCe--eeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence 3455 6788999999999999863 45899999998643 235678999999999999999999999999999
Q ss_pred eeEEEeecCCCChhhhhhc--------------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCC
Q 005177 516 AYLLYDYLPNGNLSEKIRT--------------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLK 569 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~--------------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk 569 (710)
.++||||+++|+|.+++.. .+++.++..++.|+++||+|||+. +|+|||||
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlk 201 (343)
T 1luf_A 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLA 201 (343)
T ss_dssp CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCC
Confidence 9999999999999999864 367888999999999999999998 99999999
Q ss_pred CCCeEecCCCceEEcccCccccccccCC----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCC
Q 005177 570 ASNIVFDENMEPHLAEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGS 644 (710)
Q Consensus 570 ~~NiLl~~~~~~kl~DfGla~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~ 644 (710)
|+||+++.++.+||+|||+++....... ....+...|.+||......++.++|||||||++|||+| |+.|+.+..
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 281 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence 9999999999999999999876432211 11113344778888888889999999999999999999 888886432
Q ss_pred CCCcccccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 645 SLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
... ....+.+......+. .....+.+++.+||+.||++||++.|+++.|+++.+
T Consensus 282 ~~~------~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~ 335 (343)
T 1luf_A 282 HEE------VIYYVRDGNILACPE---NCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335 (343)
T ss_dssp HHH------HHHHHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred hHH------HHHHHhCCCcCCCCC---CCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence 110 111111111011111 122457789999999999999999999999998865
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-37 Score=342.89 Aligned_cols=307 Identities=20% Similarity=0.137 Sum_probs=286.1
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
.+.++.|||++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++++|++|+
T Consensus 31 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 110 (477)
T 2id5_A 31 PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLD 110 (477)
T ss_dssp CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEE
T ss_pred CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEE
Confidence 35799999999999988889999999999999999999999999999999999999999999976667789999999999
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCc
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g 259 (710)
|++|++++..|..|.++++|+.|++++|.+++..|..+..+++|+.|++++|.+++..+..+.++++|+.|++++|++++
T Consensus 111 Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~ 190 (477)
T 2id5_A 111 ISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINA 190 (477)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCE
T ss_pred CCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcE
Confidence 99999999999999999999999999999999889999999999999999999998777779999999999999999999
Q ss_pred cCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCC
Q 005177 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (710)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 339 (710)
..+..+..+++|+.|++++|.+.+.+|..+....+|+.|++++|++++..+..+..+++|+.|+|++|.+++..+..+..
T Consensus 191 ~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 270 (477)
T 2id5_A 191 IRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHE 270 (477)
T ss_dssp ECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTT
T ss_pred eChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccc
Confidence 88888999999999999999988888877777779999999999999765578999999999999999999888888999
Q ss_pred CCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecccCCcccchh
Q 005177 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 340 l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~l~g~i~ 406 (710)
+++|+.|+|++|.+++..|..+..+++|+.|++++|++++..+..+..+++|+.|++++|.+++...
T Consensus 271 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~ 337 (477)
T 2id5_A 271 LLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCR 337 (477)
T ss_dssp CTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGG
T ss_pred cccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccc
Confidence 9999999999999999999999999999999999999998666677888999999999999987654
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-38 Score=334.80 Aligned_cols=238 Identities=16% Similarity=0.124 Sum_probs=190.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|.. .+|+.||||.+..... ..+.+.+|++++++++|||||++++++.+++..++||||+
T Consensus 13 i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~- 91 (336)
T 3h4j_B 13 IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA- 91 (336)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-
T ss_pred EEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-
Confidence 678899999999999985 7899999999975422 2457889999999999999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-CCcc
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SFPA 601 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-~~~~ 601 (710)
+|+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++....... ....
T Consensus 92 ~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~~~ 168 (336)
T 3h4j_B 92 GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC 168 (336)
T ss_dssp CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCCCT
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCCccccccc
Confidence 6899998854 678999999999999999999998 999999999999999999999999999986543221 1222
Q ss_pred cccccCchhhhhccCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHH
Q 005177 602 KIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 680 (710)
Q Consensus 602 ~~~~~~~~e~~~~~~~-~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 680 (710)
++..|.+||...+..+ +.++||||+||++|||+||+.||.+...... ...+.... ...+.. ....+.++
T Consensus 169 gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~------~~~i~~~~-~~~p~~---~s~~~~~l 238 (336)
T 3h4j_B 169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL------FKKVNSCV-YVMPDF---LSPGAQSL 238 (336)
T ss_dssp TSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC------BCCCCSSC-CCCCTT---SCHHHHHH
T ss_pred CCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH------HHHHHcCC-CCCccc---CCHHHHHH
Confidence 4556778888776554 6889999999999999999999975432111 11111111 111111 12456789
Q ss_pred HhhcCCCCCCCCCCHHHHHHH
Q 005177 681 ALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 681 ~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+.+|++.||++|||++|+++.
T Consensus 239 i~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 239 IRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp HHTTSCSSGGGSCCHHHHTTC
T ss_pred HHHHcCCChhHCcCHHHHHhC
Confidence 999999999999999999763
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-38 Score=341.07 Aligned_cols=245 Identities=21% Similarity=0.242 Sum_probs=194.5
Q ss_pred hhhhhcCCCCCccEEEEc--------CCCcEEEEEEeeccc--hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeE
Q 005177 450 ECEEAARPQSAAGCKAVL--------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~--------~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 518 (710)
..+.||+|+||.||+|.. ..+..||||+++... ...+.+.+|+++++++ +|||||+++++|.+++..++
T Consensus 73 i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 152 (382)
T 3tt0_A 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV 152 (382)
T ss_dssp EEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred eeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEE
Confidence 668899999999999984 234689999998643 2356788999999999 89999999999999999999
Q ss_pred EEeecCCCChhhhhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc
Q 005177 519 LYDYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~ 580 (710)
||||+++|+|.+++.. .+++.++.+|+.|+++||+|||+. +|+||||||+|||++.++.
T Consensus 153 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~ 229 (382)
T 3tt0_A 153 IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNV 229 (382)
T ss_dssp EEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCC
T ss_pred EEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEEcCCCc
Confidence 9999999999999964 268999999999999999999998 9999999999999999999
Q ss_pred eEEcccCccccccccCC----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccc
Q 005177 581 PHLAEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLL 655 (710)
Q Consensus 581 ~kl~DfGla~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~ 655 (710)
+||+|||+++....... ........+.+||......++.++|||||||++|||+| |+.|+...... . ..
T Consensus 230 ~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~-~-----~~ 303 (382)
T 3tt0_A 230 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE-E-----LF 303 (382)
T ss_dssp EEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-H-----HH
T ss_pred EEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-H-----HH
Confidence 99999999986543211 11112344778898888889999999999999999999 88887643211 0 01
Q ss_pred cccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 656 GEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
..+........+. .....+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 304 ~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 351 (382)
T 3tt0_A 304 KLLKEGHRMDKPS---NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 351 (382)
T ss_dssp HHHHTTCCCCCCS---SCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHcCCCCCCCc---cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1111110011111 12245778899999999999999999999998763
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-38 Score=338.93 Aligned_cols=245 Identities=16% Similarity=0.132 Sum_probs=186.9
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCCh
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
..+.||+|+||.||++.. .+|+.||||++.......+.+.+|+..+++++|||||++++++.+++..++||||+++|+|
T Consensus 24 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L 103 (361)
T 3uc3_A 24 FVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGEL 103 (361)
T ss_dssp EEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred EEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCH
Confidence 778999999999999986 5899999999987665567788999999999999999999999999999999999999999
Q ss_pred hhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc--eEEcccCccccccccCC-CCcccc
Q 005177 529 SEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME--PHLAEFGFKYLTQLADG-SFPAKI 603 (710)
Q Consensus 529 ~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~--~kl~DfGla~~~~~~~~-~~~~~~ 603 (710)
.+++.. .+++.....++.|+++||+|||+. +|+||||||+||+++.++. +||+|||+++....... ....++
T Consensus 104 ~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt 180 (361)
T 3uc3_A 104 YERICNAGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGT 180 (361)
T ss_dssp HHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC---------------
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCCCcCC
Confidence 999864 578999999999999999999998 9999999999999997765 99999999874322111 122245
Q ss_pred cccCchhhhhccCCccc-cceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 604 AWTESGEFYNAMKEEMY-MDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~-~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
.+|.+||......+..+ +||||+||++|||+||+.||.+....... ......+.... .. .+........+.+++.
T Consensus 181 ~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~--~~~~~~~~~~~-~~-~~~~~~~s~~~~~li~ 256 (361)
T 3uc3_A 181 PAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDY--RKTIQRILSVK-YS-IPDDIRISPECCHLIS 256 (361)
T ss_dssp CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCH--HHHHHHHHTTC-CC-CCTTSCCCHHHHHHHH
T ss_pred CCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHH--HHHHHHHhcCC-CC-CCCcCCCCHHHHHHHH
Confidence 56788898877666555 89999999999999999998754322111 11111111111 00 0000011245678999
Q ss_pred hcCCCCCCCCCCHHHHHHH
Q 005177 683 LCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 683 ~Cl~~~p~~RPs~~evl~~ 701 (710)
+||+.||++|||+.|++++
T Consensus 257 ~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 257 RIFVADPATRISIPEIKTH 275 (361)
T ss_dssp HHSCSCTTTSCCHHHHHTS
T ss_pred HHccCChhHCcCHHHHHhC
Confidence 9999999999999999874
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=345.34 Aligned_cols=320 Identities=20% Similarity=0.205 Sum_probs=282.1
Q ss_pred EcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCC-ChhhcCCCCCCEEECCCC
Q 005177 81 NLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHF-PGGIQSLRNLLVLDAFSN 159 (710)
Q Consensus 81 ~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~l~~L~~L~~L~L~~N 159 (710)
+.+..++. .+|. + .++|++|||++|.+++..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|
T Consensus 16 ~c~~~~l~-~lp~-l----~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n 89 (455)
T 3v47_A 16 ICINRGLH-QVPE-L----PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYN 89 (455)
T ss_dssp ECCSSCCS-SCCC-C----CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTC
T ss_pred CcCCCCcc-cCCC-C----CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCC
Confidence 44555554 3343 2 368999999999999888999999999999999999998666 567999999999999999
Q ss_pred CCCcCCchhccCCCCCCEEEccCCCCCCCCCcc--cCCCCCCCeEEecCCcCCCCCccc-cccccccccccccccccccc
Q 005177 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQ--FGSFKSLEFLHLAGNLLNDQIPAE-LGMLKTVTHMEIGYNFYQGN 236 (710)
Q Consensus 160 ~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~l~~n~~~g~ 236 (710)
.+++..|..|+++++|++|+|++|++++.+|.. |.++++|++|++++|.+++..|.. +..+++|++|++++|.+.+.
T Consensus 90 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 169 (455)
T 3v47_A 90 QFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSI 169 (455)
T ss_dssp TTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCC
T ss_pred ccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCccccc
Confidence 999989999999999999999999999866555 999999999999999999988877 89999999999999999999
Q ss_pred CCccccCC--CccchhccccccCCccCchh--------ccCCCCCcEEEccccccCCCCCccccC---------------
Q 005177 237 IPWQLGNM--SEVQYLDIAGANLSGSIPKE--------LSNLTKLESLFLFRNQLAGQVPWEFSR--------------- 291 (710)
Q Consensus 237 ~p~~l~~l--~~L~~L~ls~n~l~g~~p~~--------l~~l~~L~~L~L~~n~l~~~~p~~~~~--------------- 291 (710)
.|..+..+ .+|+.|++++|.+.+..+.. +..+++|+.|++++|.+++..|..+..
T Consensus 170 ~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~ 249 (455)
T 3v47_A 170 CEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNS 249 (455)
T ss_dssp CTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTC
T ss_pred ChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccc
Confidence 88888776 78999999999998765543 336689999999999987655443321
Q ss_pred ------------------------CCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEe
Q 005177 292 ------------------------VTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILF 347 (710)
Q Consensus 292 ------------------------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 347 (710)
.++|+.|++++|++.+.+|..++.+++|+.|++++|++++..|..+..+++|++|+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 329 (455)
T 3v47_A 250 YNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLN 329 (455)
T ss_dssp TTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEE
Confidence 25899999999999999999999999999999999999998899999999999999
Q ss_pred ccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecccCCcccchh
Q 005177 348 IWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 348 L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~l~g~i~ 406 (710)
+++|.+++..|..+..+++|+.|++++|.+++..|..+..+++|++|++++|++++..+
T Consensus 330 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 388 (455)
T 3v47_A 330 LSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPD 388 (455)
T ss_dssp CCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCH
Confidence 99999998888999999999999999999999889999999999999999999997543
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-38 Score=332.06 Aligned_cols=245 Identities=20% Similarity=0.237 Sum_probs=194.5
Q ss_pred hhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
..+.||+|+||.||+|.. .+|..||||.++... ...+.+.+|++++++++|||||++++++.+++..++|||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 106 (314)
T 2ivs_A 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVE 106 (314)
T ss_dssp EEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEe
Confidence 678899999999999974 356899999998643 335678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhcC--------------------------CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe
Q 005177 522 YLPNGNLSEKIRTK--------------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 575 (710)
Q Consensus 522 y~~~gsL~~~l~~~--------------------------~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl 575 (710)
|+++|+|.+++... .++.++.+++.|+++||+|||+. +|+||||||+||++
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp~NIli 183 (314)
T 2ivs_A 107 YAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILV 183 (314)
T ss_dssp CCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEE
T ss_pred ecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccchheEEE
Confidence 99999999999642 57888999999999999999998 99999999999999
Q ss_pred cCCCceEEcccCccccccccCC----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccc
Q 005177 576 DENMEPHLAEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKP 650 (710)
Q Consensus 576 ~~~~~~kl~DfGla~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~ 650 (710)
+.++.+||+|||+++....... ........+.+||......++.++|||||||++|||+| |+.|+.+.....
T Consensus 184 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--- 260 (314)
T 2ivs_A 184 AEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER--- 260 (314)
T ss_dssp ETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---
Confidence 9999999999999876532211 11112334678888877788999999999999999999 888886432211
Q ss_pred ccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 651 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
....+........+. .....+.+++.+||+.||++||++.|+++.|+++.
T Consensus 261 ---~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 310 (314)
T 2ivs_A 261 ---LFNLLKTGHRMERPD---NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310 (314)
T ss_dssp ---HHHHHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---HHHHhhcCCcCCCCc---cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 001111110011111 12345778999999999999999999999998764
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-38 Score=335.42 Aligned_cols=255 Identities=20% Similarity=0.245 Sum_probs=188.9
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEc-----CCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN-----RHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-----~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|+. +|+.||||++...........+|+..+..++||||+++++++.. ....++||||++
T Consensus 17 ~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~ 95 (336)
T 3g2f_A 17 LLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYP 95 (336)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCT
T ss_pred eeeecccCCCeEEEEEEE-CCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCC
Confidence 778999999999999976 78999999998654333333445555667899999999987643 235689999999
Q ss_pred CCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCC------CCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 525 NGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDC------YPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 525 ~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~------~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
+|+|.+++.. ..+|..+.+++.|+++||+|||+.+ .++|+||||||+|||++.++.+||+|||+++.......
T Consensus 96 ~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~ 175 (336)
T 3g2f_A 96 NGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRL 175 (336)
T ss_dssp TCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSC
T ss_pred CCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccceeecccccc
Confidence 9999999975 5589999999999999999999873 34899999999999999999999999999976532110
Q ss_pred ----------CCcccccccCchhhhhc-------cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccc-------
Q 005177 598 ----------SFPAKIAWTESGEFYNA-------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDG------- 653 (710)
Q Consensus 598 ----------~~~~~~~~~~~~e~~~~-------~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~------- 653 (710)
....++..|.+||...+ ..++.++|||||||++|||+||+.|+..+..........
T Consensus 176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~ 255 (336)
T 3g2f_A 176 VRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNH 255 (336)
T ss_dssp C---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSS
T ss_pred cCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCC
Confidence 01123445778887765 456678999999999999999988877544322211100
Q ss_pred ----ccc-----ccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 654 ----LLG-----EMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 654 ----~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
... ....+...............+.+++.+||+.||++|||+.|+++.|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~l 316 (336)
T 3g2f_A 256 PTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAEL 316 (336)
T ss_dssp CCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred chHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHH
Confidence 000 0000000000111123455788999999999999999999999999876
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-38 Score=334.69 Aligned_cols=246 Identities=16% Similarity=0.179 Sum_probs=192.0
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 520 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||.+..... ..+.+.+|+.++++++|||||++++++.+++..++||
T Consensus 7 ~~y~--i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 84 (323)
T 3tki_A 7 EDWD--LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (323)
T ss_dssp TCEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhce--eeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 3455 778999999999999985 5899999999975432 2456889999999999999999999999999999999
Q ss_pred eecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-
Q 005177 521 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 597 (710)
Q Consensus 521 Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~- 597 (710)
||+++|+|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 85 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 85 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp ECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred EcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 99999999999976 478999999999999999999998 999999999999999999999999999976532111
Q ss_pred ---CCcccccccCchhhhhccCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 598 ---SFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 598 ---~~~~~~~~~~~~e~~~~~~~-~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
....++..|.+||......+ +.++|||||||++|||+||+.||.......... ....... .. .......
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~-----~~~~~~~-~~-~~~~~~~ 234 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY-----SDWKEKK-TY-LNPWKKI 234 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHH-----HHHHTTC-TT-STTGGGS
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHH-----HHHhccc-cc-CCccccC
Confidence 11224455778888776654 778999999999999999999987433221100 0000000 00 1111222
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
...+.+++.+|++.||++|||+.|+++.
T Consensus 235 ~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 235 DSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 3456789999999999999999999864
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-38 Score=329.32 Aligned_cols=245 Identities=22% Similarity=0.289 Sum_probs=186.6
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.||+|+||.||+|.. .++.||||++... ...+.+.+|++++++++|||||+++|++. +..++||||+++|+|.
T Consensus 12 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~ 87 (307)
T 2eva_A 12 VEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE-SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLY 87 (307)
T ss_dssp EEEEEECCSSSEEEEEEE-TTEEEEEEECSST-THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBHH
T ss_pred eeeEeecCCCceEEEEEE-CCeeEEEEEecCh-hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHH
Confidence 668899999999999987 4789999999743 34567889999999999999999999886 4589999999999999
Q ss_pred hhhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc-eEEcccCccccccccCCCCcccc
Q 005177 530 EKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME-PHLAEFGFKYLTQLADGSFPAKI 603 (710)
Q Consensus 530 ~~l~~-----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~-~kl~DfGla~~~~~~~~~~~~~~ 603 (710)
+++.. ..++.....++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||+++......... .+.
T Consensus 88 ~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~-~gt 166 (307)
T 2eva_A 88 NVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN-KGS 166 (307)
T ss_dssp HHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------------CC
T ss_pred HHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccccC-CCC
Confidence 99975 2478889999999999999999943338999999999999998886 7999999987654322111 234
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 683 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 683 (710)
..+.+||......++.++|||||||++|||+||+.|+.......... .......... .........+.+++.+
T Consensus 167 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~----~~~~~~~~~~---~~~~~~~~~l~~li~~ 239 (307)
T 2eva_A 167 AAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRI----MWAVHNGTRP---PLIKNLPKPIESLMTR 239 (307)
T ss_dssp TTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHH----HHHHHTTCCC---CCBTTCCHHHHHHHHH
T ss_pred CceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHH----HHHHhcCCCC---CcccccCHHHHHHHHH
Confidence 45778898888889999999999999999999999987432211000 0000000000 0011122456788999
Q ss_pred cCCCCCCCCCCHHHHHHHHhccC
Q 005177 684 CTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 684 Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
||+.||++|||++|++++|+.+.
T Consensus 240 ~l~~dp~~Rps~~ell~~L~~~~ 262 (307)
T 2eva_A 240 CWSKDPSQRPSMEEIVKIMTHLM 262 (307)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHG
T ss_pred HhcCChhhCcCHHHHHHHHHHHH
Confidence 99999999999999999998764
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-38 Score=335.19 Aligned_cols=246 Identities=16% Similarity=0.183 Sum_probs=178.8
Q ss_pred hhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccC-CCCceeEEEEEEcCCceeEEEeecCCCCh
Q 005177 451 CEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 451 ~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
.+.||+|+||.||+|.. .+|+.||||.+... ....+.+|++++.+++ |||||++++++.+++..++||||+++|+|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 46799999999999986 57999999999753 3456778999999997 99999999999999999999999999999
Q ss_pred hhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC---ceEEcccCccccccccCCC--Ccc
Q 005177 529 SEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM---EPHLAEFGFKYLTQLADGS--FPA 601 (710)
Q Consensus 529 ~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~---~~kl~DfGla~~~~~~~~~--~~~ 601 (710)
.+++.. .+++.++..|+.|+++||+|||+. +|+||||||+||+++.++ .+||+|||+++........ ...
T Consensus 94 ~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 170 (325)
T 3kn6_A 94 FERIKKKKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC 170 (325)
T ss_dssp HHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---------
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccC
Confidence 999975 468999999999999999999998 999999999999998765 8999999999865432211 122
Q ss_pred cccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc-cccccccccccccccCCCcchHHHHHHHHHH
Q 005177 602 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK-PIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 680 (710)
Q Consensus 602 ~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 680 (710)
++..|.+||......++.++||||+||++|||+||+.||......... ........+...........+......+.++
T Consensus 171 ~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 250 (325)
T 3kn6_A 171 FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDL 250 (325)
T ss_dssp -------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHH
T ss_pred CCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHH
Confidence 345577889888888999999999999999999999998743321110 0111111222221111112223344677899
Q ss_pred HhhcCCCCCCCCCCHHHHHHH
Q 005177 681 ALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 681 ~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+.+|++.||++|||++|++++
T Consensus 251 i~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 251 IQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HHHHHCCCTTTCCCTTTSTTC
T ss_pred HHHHCCCChhHCCCHHHHhcC
Confidence 999999999999999998753
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=348.54 Aligned_cols=328 Identities=17% Similarity=0.080 Sum_probs=274.9
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEE
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 155 (710)
.++.++++++.+++..|..+.. +++|++|+|++|.+.+..|..|.++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 34 ~l~~L~Ls~n~i~~~~~~~~~~--l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 111 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQNTTFSR--LINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLF 111 (606)
T ss_dssp TCCEEECTTCCCSEECTTTSTT--CTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEE
T ss_pred cCcEEEccCCccCcCChhHhcc--CccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEee
Confidence 5788999999999887778877 89999999999999988899999999999999999999999999999999999999
Q ss_pred CCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccccccccc--ccccccccc
Q 005177 156 AFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVT--HMEIGYNFY 233 (710)
Q Consensus 156 L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~--~L~l~~n~~ 233 (710)
|++|.+++..|..++++++|++|+|++|.+++..+..+..+++|++|++++|.+++..|..++.+++|+ .|++++|.+
T Consensus 112 L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l 191 (606)
T 3t6q_A 112 FIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDI 191 (606)
T ss_dssp CTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCC
T ss_pred ccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCcc
Confidence 999999987788899999999999999999974444455599999999999999988888899999998 788999988
Q ss_pred cccCCccccCC---------------------------------------------------CccchhccccccCCccCc
Q 005177 234 QGNIPWQLGNM---------------------------------------------------SEVQYLDIAGANLSGSIP 262 (710)
Q Consensus 234 ~g~~p~~l~~l---------------------------------------------------~~L~~L~ls~n~l~g~~p 262 (710)
.+..|..+... .+|+.|++++|++++..+
T Consensus 192 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~ 271 (606)
T 3t6q_A 192 AGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISS 271 (606)
T ss_dssp CEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCT
T ss_pred CccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCH
Confidence 87666544321 157777888888887777
Q ss_pred hhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcc-cCCCC
Q 005177 263 KELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPES-LVQLP 341 (710)
Q Consensus 263 ~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~ 341 (710)
..+..+++|++|++++|+++ .+|..+..+++|++|++++|++.+..|..+..+++|+.|++++|.+.+.+|.. +..++
T Consensus 272 ~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~ 350 (606)
T 3t6q_A 272 NTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLE 350 (606)
T ss_dssp TTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCT
T ss_pred HHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccC
Confidence 77888888888888888887 67777888888888888888888777778888888888888888887766554 77888
Q ss_pred CCcEEeccCCCCCCCC--CcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecccCCcccchh
Q 005177 342 SLEILFIWNNYFSGSL--PENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 342 ~L~~L~L~~N~l~g~~--p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~l~g~i~ 406 (710)
+|++|++++|.+++.. |..+..+++|+.|++++|.+++..|..+..+++|+.|++++|.+++..+
T Consensus 351 ~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 417 (606)
T 3t6q_A 351 NLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDA 417 (606)
T ss_dssp TCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTT
T ss_pred cCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCccc
Confidence 8888888888887655 6677888888888888888887777788888888888888888876543
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-37 Score=325.14 Aligned_cols=251 Identities=18% Similarity=0.254 Sum_probs=180.4
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
.|. ..+.||+|+||.||+|.. .+|+.||||.++.... ..+.+.+|++++++++|||||++++++.+++..++|||
T Consensus 6 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 6 QFK--QLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred cee--EeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 355 778999999999999986 5799999999976432 34678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhc--------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccc
Q 005177 522 YLPNGNLSEKIRT--------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 522 y~~~gsL~~~l~~--------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~ 593 (710)
|++ |+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 699998854 367888999999999999999998 99999999999999999999999999998654
Q ss_pred ccCCC--CcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCC---------------cccccccc
Q 005177 594 LADGS--FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKPIDGLL 655 (710)
Q Consensus 594 ~~~~~--~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~---------------~~~~~~~~ 655 (710)
..... ...++..|.+||.... ..++.++|||||||++|||+||+.||.+..... .|......
T Consensus 160 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 239 (317)
T 2pmi_A 160 IPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKL 239 (317)
T ss_dssp SCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGC
T ss_pred CCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhh
Confidence 22111 1223455778887765 467899999999999999999999987432110 00000000
Q ss_pred cccccccccCCCcchH---------HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 656 GEMYNENEVGSSSSLQ---------DEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 656 ~~~~~~~~~~~~~~~~---------~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
................ .....+.+++.+|++.||++|||+.|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 240 PKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp TTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 0000000000000011 112467899999999999999999999864
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-38 Score=340.95 Aligned_cols=250 Identities=18% Similarity=0.192 Sum_probs=197.2
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
.+.+.|. ..+.||+|+||.||+|.. .+|+.||+|.+.... .....+.+|++++++++|||||++++++.+++..++
T Consensus 48 ~~~~~y~--i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 125 (387)
T 1kob_A 48 SVYDYYD--ILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVL 125 (387)
T ss_dssp CGGGTEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEE
T ss_pred ccccceE--EEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEE
Confidence 3445566 778999999999999985 578999999998643 345678899999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC--CCceEEcccCcccccc
Q 005177 519 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE--NMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~--~~~~kl~DfGla~~~~ 593 (710)
||||+++|+|.+++.. .+++.....++.|+++||+|||+. +|+||||||+|||++. ++.+||+|||+++...
T Consensus 126 v~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~ 202 (387)
T 1kob_A 126 ILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 202 (387)
T ss_dssp EEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred EEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecC
Confidence 9999999999999965 468999999999999999999998 9999999999999984 4789999999998654
Q ss_pred ccCCC-CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHH
Q 005177 594 LADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 672 (710)
Q Consensus 594 ~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (710)
..... ...++..|.+||+.....++.++|||||||++|||+||+.|+.+...... ...+...........+..
T Consensus 203 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~------~~~i~~~~~~~~~~~~~~ 276 (387)
T 1kob_A 203 PDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET------LQNVKRCDWEFDEDAFSS 276 (387)
T ss_dssp TTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH------HHHHHHCCCCCCSSTTTT
T ss_pred CCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHH------HHHHHhCCCCCCcccccc
Confidence 32111 11245557888988888899999999999999999999999875332110 011110000000111112
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 673 EIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
....+.+++.+|++.||++|||+.|+++.
T Consensus 277 ~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 277 VSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 23467789999999999999999999874
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-38 Score=340.03 Aligned_cols=248 Identities=15% Similarity=0.140 Sum_probs=192.1
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCcee
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 517 (710)
++|. ..+.||+|+||.||+|+. .+|+.||||+++.... ..+.+.+|..++.++ +|||||++++++.+++..+
T Consensus 52 ~~y~--~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 52 QDFD--LLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp GGEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred hHcE--EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 3455 778999999999999985 5788999999986422 245577888888876 8999999999999999999
Q ss_pred EEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 518 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
+||||+++|+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 130 lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 99999999999999875 578999999999999999999999 9999999999999999999999999999853221
Q ss_pred C--CCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc--cc-ccccccccccccccCCCcch
Q 005177 596 D--GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN--KP-IDGLLGEMYNENEVGSSSSL 670 (710)
Q Consensus 596 ~--~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~ 670 (710)
. .....++..|.+||+.....++.++||||+||++|||++|+.||........ .. .......+.... ...+..
T Consensus 207 ~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~-~~~p~~- 284 (396)
T 4dc2_A 207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-IRIPRS- 284 (396)
T ss_dssp TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCC-CCCCTT-
T ss_pred CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccc-cCCCCc-
Confidence 1 1122355668889998888899999999999999999999999963321110 00 000111111111 111111
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCH------HHHHH
Q 005177 671 QDEIKLVLDVALLCTRSTPSDRPSM------EEALK 700 (710)
Q Consensus 671 ~~~~~~~~~l~~~Cl~~~p~~RPs~------~evl~ 700 (710)
....+.+++.+|++.||++||++ .|+++
T Consensus 285 --~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~ 318 (396)
T 4dc2_A 285 --LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 318 (396)
T ss_dssp --SCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred --CCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence 23456789999999999999985 56654
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=323.15 Aligned_cols=244 Identities=21% Similarity=0.294 Sum_probs=188.0
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchh--------HHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATR--------IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~--------~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 520 (710)
..+.||+|+||.||+|.. .+++.||||++...... .+.+.+|++++++++||||+++++++.+.. ++||
T Consensus 23 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~ 100 (287)
T 4f0f_A 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVM 100 (287)
T ss_dssp EEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEE
T ss_pred ehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEE
Confidence 678899999999999986 68999999999753221 267889999999999999999999986554 7999
Q ss_pred eecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCC--ceecCCCCCCeEecCCCc-----eEEcccCccc
Q 005177 521 DYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPA--IPHGDLKASNIVFDENME-----PHLAEFGFKY 590 (710)
Q Consensus 521 Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~--iiHrDlk~~NiLl~~~~~-----~kl~DfGla~ 590 (710)
||+++|+|.+.+.. ..++..+..++.|+++||+|||+. + |+||||||+||+++.++. +||+|||+++
T Consensus 101 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~ 177 (287)
T 4f0f_A 101 EFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177 (287)
T ss_dssp ECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCB
T ss_pred EecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCCCCccc
Confidence 99999999998854 568999999999999999999998 6 999999999999988776 9999999987
Q ss_pred cccccCCCCcccccccCchhhh--hccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCc
Q 005177 591 LTQLADGSFPAKIAWTESGEFY--NAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 668 (710)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~e~~--~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (710)
......... .+...|.+||.. ....++.++||||+||++|||+||+.|+....................+. . +
T Consensus 178 ~~~~~~~~~-~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~--~- 252 (287)
T 4f0f_A 178 QSVHSVSGL-LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPT-I--P- 252 (287)
T ss_dssp CCSSCEECC-CCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCC-C--C-
T ss_pred ccccccccc-CCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCC-C--C-
Confidence 543221111 234457788876 34456889999999999999999999987433211000000000000000 0 1
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 669 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 669 ~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
......+.+++.+||+.||++|||+.|+++.|+++
T Consensus 253 --~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 253 --EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp --TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred --cccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 11234577899999999999999999999999875
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-38 Score=332.92 Aligned_cols=245 Identities=20% Similarity=0.266 Sum_probs=190.3
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcE----EEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGIT----VSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~----vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
..+.||+|+||.||+|.. .+|.. ||+|.+.... ...+.+.+|+.++++++|||||+++++|. ++..++||||
T Consensus 17 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~ 95 (325)
T 3kex_A 17 KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQY 95 (325)
T ss_dssp EEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEEC
T ss_pred eeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEe
Confidence 778999999999999985 45554 7888876432 22456778999999999999999999986 5678999999
Q ss_pred cCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC
Q 005177 523 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 599 (710)
Q Consensus 523 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 599 (710)
+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 96 ~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~ 172 (325)
T 3kex_A 96 LPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQL 172 (325)
T ss_dssp CTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCC
T ss_pred CCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCcccccc
Confidence 999999999965 568889999999999999999999 99999999999999999999999999998764322211
Q ss_pred ----cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 600 ----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 600 ----~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
..+...|.+||......++.++|||||||++|||+| |+.|+.+...... . ..+........+.. ..
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--~----~~~~~~~~~~~~~~---~~ 243 (325)
T 3kex_A 173 LYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV--P----DLLEKGERLAQPQI---CT 243 (325)
T ss_dssp C-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHH--H----HHHHTTCBCCCCTT---BC
T ss_pred cccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHH--H----HHHHcCCCCCCCCc---Cc
Confidence 113334778898888889999999999999999999 9988864322110 0 00000000110111 12
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
..+.+++.+||+.||++|||+.|+++.|+.+.+
T Consensus 244 ~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 244 IDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp TTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 245678889999999999999999999988754
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-38 Score=334.76 Aligned_cols=248 Identities=10% Similarity=0.016 Sum_probs=194.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
..+.||+|+||.||+|.. .+|+.||||.+.... ..+.+.+|+++++++ +||||+++++++..++..++||||+ +|+
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (330)
T 2izr_A 13 VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPS 90 (330)
T ss_dssp EEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCC
Confidence 778999999999999984 789999999987543 234578899999999 9999999999999999999999999 899
Q ss_pred hhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc-----eEEcccCccccccccCC--
Q 005177 528 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME-----PHLAEFGFKYLTQLADG-- 597 (710)
Q Consensus 528 L~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~-----~kl~DfGla~~~~~~~~-- 597 (710)
|.+++.. ..++..+..|+.|+++||+|||+. +|+||||||+|||++.++. +||+|||+++.......
T Consensus 91 L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~ 167 (330)
T 2izr_A 91 LEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKK 167 (330)
T ss_dssp HHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCC
T ss_pred HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCc
Confidence 9999873 578999999999999999999998 9999999999999998887 99999999986533221
Q ss_pred -------CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcch
Q 005177 598 -------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 670 (710)
Q Consensus 598 -------~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (710)
....++..|.+||......++.++|||||||++|||+||+.||.+...... ......+............
T Consensus 168 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~---~~~~~~i~~~~~~~~~~~~ 244 (330)
T 2izr_A 168 HIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL---KERYQKIGDTKRATPIEVL 244 (330)
T ss_dssp BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH---HHHHHHHHHHHHHSCHHHH
T ss_pred cccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH---HHHHHHHHhhhccCCHHHH
Confidence 112244557788988888899999999999999999999999875322110 0011111111100000000
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 671 QDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 671 ~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
.+..+.+.+++..|++.||.+||++.++.+.|+++
T Consensus 245 ~~~~p~~~~li~~~l~~~p~~RP~~~~l~~~l~~~ 279 (330)
T 2izr_A 245 CENFPEMATYLRYVRRLDFFEKPDYDYLRKLFTDL 279 (330)
T ss_dssp TTTCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred hccChHHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 01122678899999999999999999999998765
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-38 Score=328.28 Aligned_cols=240 Identities=15% Similarity=0.151 Sum_probs=183.7
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---------------------------hHHHHHHHHHHHhccCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---------------------------RIKIVSEFITRIGTVRHK 501 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---------------------------~~~~~~~e~~~l~~l~H~ 501 (710)
..+.||+|+||.||+|.. .+|+.||||.+..... ..+.+.+|++++++++||
T Consensus 17 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 96 (298)
T 2zv2_A 17 LKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHP 96 (298)
T ss_dssp EEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCT
T ss_pred EEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCC
Confidence 778999999999999985 6789999999975421 135688999999999999
Q ss_pred CceeEEEEEEc--CCceeEEEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC
Q 005177 502 NLIRLLGFCYN--RHQAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN 578 (710)
Q Consensus 502 niv~l~g~~~~--~~~~~lv~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~ 578 (710)
|||++++++.+ ++..++||||+++|+|.+++.. .+++.....++.|+++||+|||+. +|+||||||+||+++.+
T Consensus 97 ~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~ 173 (298)
T 2zv2_A 97 NVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGED 173 (298)
T ss_dssp TBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTT
T ss_pred CCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCC
Confidence 99999999987 5678999999999999988754 578999999999999999999999 99999999999999999
Q ss_pred CceEEcccCccccccccCC--CCcccccccCchhhhhccC---CccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccc
Q 005177 579 MEPHLAEFGFKYLTQLADG--SFPAKIAWTESGEFYNAMK---EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDG 653 (710)
Q Consensus 579 ~~~kl~DfGla~~~~~~~~--~~~~~~~~~~~~e~~~~~~---~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~ 653 (710)
+.+||+|||+++....... ....++..|.+||...... .+.++|||||||++|||++|+.|+.+.....
T Consensus 174 ~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~------ 247 (298)
T 2zv2_A 174 GHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC------ 247 (298)
T ss_dssp SCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------
T ss_pred CCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHH------
Confidence 9999999999976543221 1122344577788776543 3678999999999999999999986432110
Q ss_pred cccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 654 LLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
....+.... .. .+........+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~~~~~~-~~-~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 248 LHSKIKSQA-LE-FPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHHHHHCC-CC-CCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHhccc-CC-CCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 000110000 00 0000111245678899999999999999999875
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-38 Score=329.41 Aligned_cols=238 Identities=17% Similarity=0.165 Sum_probs=193.4
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||++.. .+|+.||||.++... ...+.+.+|+.++++++|||||++++++.+.+..|+||||++
T Consensus 10 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~ 89 (318)
T 1fot_A 10 ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIE 89 (318)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCC
Confidence 678999999999999986 579999999998642 235667889999999999999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCccc
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK 602 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~ 602 (710)
+|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........ ..+
T Consensus 90 gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~-~~g 165 (318)
T 1fot_A 90 GGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYT-LCG 165 (318)
T ss_dssp SCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCC-CCS
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCCcccc-ccC
Confidence 9999999975 568888999999999999999998 9999999999999999999999999999875433222 224
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
+..|.+||......++.++||||+||++|||++|+.||.+..... ....+.... ...+.. ....+.+++.
T Consensus 166 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~------~~~~i~~~~-~~~p~~---~~~~~~~li~ 235 (318)
T 1fot_A 166 TPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK------TYEKILNAE-LRFPPF---FNEDVKDLLS 235 (318)
T ss_dssp CTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHHCC-CCCCTT---SCHHHHHHHH
T ss_pred CccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCC-CCCCCC---CCHHHHHHHH
Confidence 455778898888889999999999999999999999987433211 111111111 111111 1245678889
Q ss_pred hcCCCCCCCCC-----CHHHHHHH
Q 005177 683 LCTRSTPSDRP-----SMEEALKL 701 (710)
Q Consensus 683 ~Cl~~~p~~RP-----s~~evl~~ 701 (710)
+|++.||++|| +++|++++
T Consensus 236 ~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 236 RLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp HHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHhccCHHHcCCCcCCCHHHHhcC
Confidence 99999999999 88888753
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-38 Score=324.69 Aligned_cols=244 Identities=21% Similarity=0.262 Sum_probs=197.1
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCCh
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
..+.||+|+||.||+|.. .++..||||.+.......+.+.+|++++++++||||+++++++.+++..++||||+++|+|
T Consensus 17 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 96 (288)
T 3kfa_A 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 96 (288)
T ss_dssp EEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEH
T ss_pred EEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcH
Confidence 678899999999999986 4588999999987766778899999999999999999999999999999999999999999
Q ss_pred hhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC---cc
Q 005177 529 SEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---PA 601 (710)
Q Consensus 529 ~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~---~~ 601 (710)
.+++.. ..++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......... ..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~ 173 (288)
T 3kfa_A 97 LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 173 (288)
T ss_dssp HHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTEE
T ss_pred HHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccCCc
Confidence 999964 368899999999999999999998 99999999999999999999999999998654322111 11
Q ss_pred cccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHH
Q 005177 602 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 680 (710)
Q Consensus 602 ~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 680 (710)
....+.+||......++.++||||+||++|||++ |+.|+....... .. ........ ...+. .....+.++
T Consensus 174 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~--~~-~~~~~~~~---~~~~~---~~~~~l~~l 244 (288)
T 3kfa_A 174 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--VY-ELLEKDYR---MERPE---GCPEKVYEL 244 (288)
T ss_dssp ECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HH-HHHHTTCC---CCCCT---TCCHHHHHH
T ss_pred cccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HH-HHHhccCC---CCCCC---CCCHHHHHH
Confidence 2334778898888889999999999999999999 777776432111 00 00001000 11111 122457788
Q ss_pred HhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 681 ALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 681 ~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
+.+|++.||++|||+.|+++.|+.+
T Consensus 245 i~~~l~~dp~~Rps~~~~~~~l~~~ 269 (288)
T 3kfa_A 245 MRACWQWNPSDRPSFAEIHQAFETM 269 (288)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHhCCChhhCcCHHHHHHHHHHH
Confidence 9999999999999999999998765
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-37 Score=344.74 Aligned_cols=320 Identities=23% Similarity=0.239 Sum_probs=211.4
Q ss_pred CcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEE
Q 005177 75 TIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVL 154 (710)
Q Consensus 75 ~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L 154 (710)
..++.++++++.+.+..|..+.. +++|++|+|++|.+++..|..|.++++|++|+|++|+++ .+|.. .+++|++|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~--l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L 95 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILS--LSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHL 95 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTT--CTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEE
T ss_pred ccccEEECCCCcccccChhhccc--cccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEE
Confidence 35778888888888766666666 888888888888888877888888888888888888888 46655 78888888
Q ss_pred ECCCCCCCc-CCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCC--CeEEecCCcC--CCCCcccccccc--------
Q 005177 155 DAFSNSFSG-SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSL--EFLHLAGNLL--NDQIPAELGMLK-------- 221 (710)
Q Consensus 155 ~L~~N~l~~-~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L--~~L~L~~N~l--~~~~p~~l~~l~-------- 221 (710)
+|++|.+++ .+|..++++++|++|+|++|.+++ ..+..+++| +.|++++|.+ .+..|..+..+.
T Consensus 96 ~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l 172 (520)
T 2z7x_B 96 DLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVF 172 (520)
T ss_dssp ECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEEC
T ss_pred eccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEe
Confidence 888888887 578888888888888888888765 235555555 6666666666 445554444322
Q ss_pred ---------------------------------------------------------------------------ccccc
Q 005177 222 ---------------------------------------------------------------------------TVTHM 226 (710)
Q Consensus 222 ---------------------------------------------------------------------------~L~~L 226 (710)
+|++|
T Consensus 173 ~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L 252 (520)
T 2z7x_B 173 PTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYF 252 (520)
T ss_dssp CSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEE
T ss_pred ccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEE
Confidence 45555
Q ss_pred ccccccccccCCccc-----------------------------------------------------cCCCccchhccc
Q 005177 227 EIGYNFYQGNIPWQL-----------------------------------------------------GNMSEVQYLDIA 253 (710)
Q Consensus 227 ~l~~n~~~g~~p~~l-----------------------------------------------------~~l~~L~~L~ls 253 (710)
++++|.+.|.+|..+ ..+++|++|+++
T Consensus 253 ~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls 332 (520)
T 2z7x_B 253 SISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFS 332 (520)
T ss_dssp EEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECC
T ss_pred EeecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeE
Confidence 555555555555544 344555566666
Q ss_pred cccCCccCchhccCCCCCcEEEccccccCC--CCCccccCCCCCCEEEccCCCCCCCCCcc-ccCCCCCCEEEcccccCc
Q 005177 254 GANLSGSIPKELSNLTKLESLFLFRNQLAG--QVPWEFSRVTTLKSLDLSDNRLSGPIPES-FADLKNLRLLSLMYNEMS 330 (710)
Q Consensus 254 ~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~ 330 (710)
+|++++.+|..+..+++|++|++++|++++ .+|..+..+++|++|++++|++++.+|.. +..+++|+.|++++|+++
T Consensus 333 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~ 412 (520)
T 2z7x_B 333 NNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILT 412 (520)
T ss_dssp SSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCC
T ss_pred CCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCC
Confidence 666665555555666666666666666654 33445555666666666666666544432 555566666666666665
Q ss_pred ccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCccc-ccCCCceeeEecccCCcccchh
Q 005177 331 GTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPD-ICSGGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 331 g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~-~~~~~~L~~l~l~~N~l~g~i~ 406 (710)
+.+|..+. ++|++|++++|+++ .+|..+..+++|+.|++++|+++ .+|.. +..+++|+.|++++|.+++..+
T Consensus 413 ~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 413 DTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp GGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccCC
Confidence 55554443 56666666666666 56666666666666666666666 45554 5566666666666666666544
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-38 Score=337.85 Aligned_cols=242 Identities=17% Similarity=0.149 Sum_probs=191.6
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCcee
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 517 (710)
++|. ..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|.+++.++ +|||||++++++.+++..|
T Consensus 23 ~~y~--~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 23 DNFE--FIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp CCEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred hheE--EEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 3455 778999999999999985 679999999998642 2345677889999887 6999999999999999999
Q ss_pred EEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 518 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
+||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 101 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~ 177 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN 177 (353)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecccC
Confidence 99999999999999965 678999999999999999999999 9999999999999999999999999999853221
Q ss_pred CC--CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 596 DG--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 596 ~~--~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
.. ....++..|.+||+.....++.++||||+||++|||+||+.||.+.... .....+.... ...+.. .
T Consensus 178 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------~~~~~i~~~~-~~~p~~---~ 247 (353)
T 3txo_A 178 GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED------DLFEAILNDE-VVYPTW---L 247 (353)
T ss_dssp --------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-CCCCTT---S
T ss_pred CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH------HHHHHHHcCC-CCCCCC---C
Confidence 11 1222455678889888888999999999999999999999998743321 1111221111 111111 2
Q ss_pred HHHHHHHHhhcCCCCCCCCCCH------HHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPSM------EEALK 700 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~------~evl~ 700 (710)
...+.+++.+|++.||++||++ +|+++
T Consensus 248 ~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 248 HEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp CHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 2456788999999999999998 77764
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=323.05 Aligned_cols=244 Identities=16% Similarity=0.175 Sum_probs=183.9
Q ss_pred hhhhhcCCCCCccEEEEcC----CCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~----~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
..+.||+|+||.||+|... .+..||||.++... ...+.+.+|+..+++++||||+++++++. ++..++||||+
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~ 97 (281)
T 1mp8_A 19 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELC 97 (281)
T ss_dssp EEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred EEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEEecC
Confidence 6788999999999999863 35679999987532 23567889999999999999999999984 56789999999
Q ss_pred CCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--
Q 005177 524 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 598 (710)
Q Consensus 524 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~-- 598 (710)
++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 98 ~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 174 (281)
T 1mp8_A 98 TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 174 (281)
T ss_dssp TTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC---------------
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccCccccccc
Confidence 99999999974 468999999999999999999998 9999999999999999999999999999765432111
Q ss_pred -CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHH
Q 005177 599 -FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 676 (710)
Q Consensus 599 -~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (710)
.......|.+||......++.++|||||||++|||++ |+.|+.+..... ....+........+. .....
T Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~------~~~~i~~~~~~~~~~---~~~~~ 245 (281)
T 1mp8_A 175 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND------VIGRIENGERLPMPP---NCPPT 245 (281)
T ss_dssp ----CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG------HHHHHHTTCCCCCCT---TCCHH
T ss_pred ccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH------HHHHHHcCCCCCCCC---CCCHH
Confidence 1112334778888888889999999999999999997 777876432211 111111111011111 12245
Q ss_pred HHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 677 VLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 677 ~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
+.+++.+|++.||++|||+.|+++.|+.+.
T Consensus 246 l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 246 LYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 678899999999999999999999998763
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-38 Score=323.36 Aligned_cols=243 Identities=19% Similarity=0.270 Sum_probs=194.7
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.||+|+||.||+|...++..||||.++......+.+.+|++++++++||||+++++++. .+..++||||+++|+|.
T Consensus 17 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~ 95 (279)
T 1qpc_A 17 LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLV 95 (279)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHH
T ss_pred heeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCCCHH
Confidence 67889999999999999888889999999876656778999999999999999999999986 45689999999999999
Q ss_pred hhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC---CCccc
Q 005177 530 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG---SFPAK 602 (710)
Q Consensus 530 ~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~---~~~~~ 602 (710)
+++.. ..++..+.+++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++....... .....
T Consensus 96 ~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 172 (279)
T 1qpc_A 96 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF 172 (279)
T ss_dssp HHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCC
T ss_pred HHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCC
Confidence 99975 578999999999999999999998 999999999999999999999999999876542211 11112
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHH
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 681 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 681 (710)
...+.+||......++.++|||||||++|||+| |+.|+.+..... ....+........+. .....+.+++
T Consensus 173 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~---~~~~~l~~li 243 (279)
T 1qpc_A 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE------VIQNLERGYRMVRPD---NCPEELYQLM 243 (279)
T ss_dssp CTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH------HHHHHHTTCCCCCCT---TCCHHHHHHH
T ss_pred ccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH------HHHHHhcccCCCCcc---cccHHHHHHH
Confidence 234678888887788999999999999999999 787876432111 001111100000011 1124567889
Q ss_pred hhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 682 LLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 682 ~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
.+|++.||++|||+.++++.|+++
T Consensus 244 ~~~l~~~p~~Rps~~~l~~~l~~~ 267 (279)
T 1qpc_A 244 RLCWKERPEDRPTFDYLRSVLEDF 267 (279)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHhccChhhCCCHHHHHHHHHHH
Confidence 999999999999999999999876
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-38 Score=336.43 Aligned_cols=245 Identities=16% Similarity=0.184 Sum_probs=192.3
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
+.|. ..+.||+|+||.||++.. .+|+.||||.+.... ...+.+.+|++++++++|||||+++++|.+.+..|+
T Consensus 15 ~~y~--i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 92 (384)
T 4fr4_A 15 DHFE--ILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFM 92 (384)
T ss_dssp GGEE--EEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHeE--EEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 3455 778999999999999985 678999999997542 235678899999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC
Q 005177 519 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 596 (710)
||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 93 v~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 93 VVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp EECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence 9999999999999976 568889999999999999999999 99999999999999999999999999998654322
Q ss_pred C-CCcccccccCchhhhhc---cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHH
Q 005177 597 G-SFPAKIAWTESGEFYNA---MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 672 (710)
Q Consensus 597 ~-~~~~~~~~~~~~e~~~~---~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (710)
. ....++..|.+||+... ..++.++|||||||++|||+||+.||........ ......+.... ...+..
T Consensus 170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~---~~~~~~~~~~~-~~~p~~--- 242 (384)
T 4fr4_A 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS---KEIVHTFETTV-VTYPSA--- 242 (384)
T ss_dssp CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCH---HHHHHHHHHCC-CCCCTT---
T ss_pred ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccH---HHHHHHHhhcc-cCCCCc---
Confidence 1 12224555778887753 3578899999999999999999999874332111 00111111111 111111
Q ss_pred HHHHHHHHHhhcCCCCCCCCCC-HHHHHH
Q 005177 673 EIKLVLDVALLCTRSTPSDRPS-MEEALK 700 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RPs-~~evl~ 700 (710)
....+.+++.+|++.||++||+ ++++.+
T Consensus 243 ~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 243 WSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred CCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 2345778999999999999998 677654
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=343.99 Aligned_cols=253 Identities=19% Similarity=0.217 Sum_probs=191.7
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcCC----
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH---- 514 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~---- 514 (710)
.+.|. ..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|++++++++|||||++++++...+
T Consensus 61 ~~~y~--~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 138 (464)
T 3ttj_A 61 LKRYQ--NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 138 (464)
T ss_dssp ETTEE--EEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred cCCeE--EEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcccc
Confidence 34455 778999999999999984 67999999999863 234567889999999999999999999997653
Q ss_pred --ceeEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccc
Q 005177 515 --QAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 592 (710)
Q Consensus 515 --~~~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~ 592 (710)
..|+|||||++ ++.+.+...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 139 ~~~~~lv~E~~~~-~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 214 (464)
T 3ttj_A 139 FQDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 214 (464)
T ss_dssp CCEEEEEEECCSE-EHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC---
T ss_pred CCeEEEEEeCCCC-CHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeeec
Confidence 56999999985 68888877889999999999999999999999 9999999999999999999999999999876
Q ss_pred cccCCC-CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc-------------c---cc
Q 005177 593 QLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-------------G---LL 655 (710)
Q Consensus 593 ~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~-------------~---~~ 655 (710)
...... ...++.+|.+||+..+..++.++||||+||++|||++|+.||.+......+... . ..
T Consensus 215 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~ 294 (464)
T 3ttj_A 215 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 294 (464)
T ss_dssp --CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHH
T ss_pred CCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhh
Confidence 432211 122566788999988888999999999999999999999998754321110000 0 00
Q ss_pred cccccccc---------------cCC-CcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 656 GEMYNENE---------------VGS-SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 656 ~~~~~~~~---------------~~~-~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.......+ ... ..........+.+++.+|++.||++|||++|++++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 295 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000 000 00111224678899999999999999999999874
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-38 Score=334.70 Aligned_cols=247 Identities=18% Similarity=0.199 Sum_probs=194.0
Q ss_pred hhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccc--hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 520 (710)
..+.||+|+||.||+|.. .++..||||.+.... ...+.+.+|++++.++ +||||+++++++...+..++||
T Consensus 49 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 128 (344)
T 1rjb_A 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIF 128 (344)
T ss_dssp EEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEE
Confidence 678999999999999985 356789999997532 2356788999999999 8999999999999999999999
Q ss_pred eecCCCChhhhhhcC-------------------------CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe
Q 005177 521 DYLPNGNLSEKIRTK-------------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 575 (710)
Q Consensus 521 Ey~~~gsL~~~l~~~-------------------------~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl 575 (710)
||+++|+|.+++... +++..+..++.|+++||+|||+. +|+||||||+||++
T Consensus 129 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll 205 (344)
T 1rjb_A 129 EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLV 205 (344)
T ss_dssp ECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSGGGEEE
T ss_pred ecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEE
Confidence 999999999999652 57888999999999999999998 99999999999999
Q ss_pred cCCCceEEcccCccccccccCCCC----cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccc
Q 005177 576 DENMEPHLAEFGFKYLTQLADGSF----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKP 650 (710)
Q Consensus 576 ~~~~~~kl~DfGla~~~~~~~~~~----~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~ 650 (710)
+.++.+||+|||+++......... ..+...|.+||......++.++|||||||++|||+| |+.|+.+......
T Consensus 206 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-- 283 (344)
T 1rjb_A 206 THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN-- 283 (344)
T ss_dssp ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH--
T ss_pred cCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHH--
Confidence 999999999999997654322111 112334778888888889999999999999999998 8888864332110
Q ss_pred ccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 651 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
........... ..+. .....+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 284 ~~~~~~~~~~~---~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 334 (344)
T 1rjb_A 284 FYKLIQNGFKM---DQPF---YATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA 334 (344)
T ss_dssp HHHHHHTTCCC---CCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred HHHHHhcCCCC---CCCC---CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 00000010000 0011 112457789999999999999999999999988754
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=329.02 Aligned_cols=248 Identities=17% Similarity=0.224 Sum_probs=184.7
Q ss_pred cCCchhhhhhcCCCCCccEEEEcCC-C---cEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCce-
Q 005177 445 SFNSTECEEAARPQSAAGCKAVLPT-G---ITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA- 516 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~~~-g---~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~- 516 (710)
.|. ..+.||+|+||.||+|.... + ..||||.++.. ....+.+.+|++++++++|||||++++++...+..
T Consensus 24 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 24 QFT--LGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp -CE--EEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred HeE--EeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 355 77899999999999998643 3 28999999763 23467789999999999999999999999887655
Q ss_pred -----eEEEeecCCCChhhhhhc--------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEE
Q 005177 517 -----YLLYDYLPNGNLSEKIRT--------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 583 (710)
Q Consensus 517 -----~lv~Ey~~~gsL~~~l~~--------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl 583 (710)
++||||+++|+|.+++.. ..++..+.+++.|+++||+|||+. +|+||||||+||+++.++.+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEE
Confidence 999999999999999854 378899999999999999999999 9999999999999999999999
Q ss_pred cccCccccccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccc
Q 005177 584 AEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEM 658 (710)
Q Consensus 584 ~DfGla~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~ 658 (710)
+|||+++........ .......+.+||......++.++|||||||++|||+| |+.|+.+..... ....+
T Consensus 179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~------~~~~~ 252 (323)
T 3qup_A 179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE------IYNYL 252 (323)
T ss_dssp CCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG------HHHHH
T ss_pred eeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH------HHHHH
Confidence 999999765322111 1112234677888888889999999999999999999 777776433211 11111
Q ss_pred ccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 659 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
........+. .....+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 253 ~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l 297 (323)
T 3qup_A 253 IGGNRLKQPP---ECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297 (323)
T ss_dssp HTTCCCCCCT---TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hcCCCCCCCC---ccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1111011111 12245778999999999999999999999998764
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-37 Score=321.87 Aligned_cols=247 Identities=19% Similarity=0.251 Sum_probs=187.9
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchh---HHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATR---IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~---~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.||+|+||.||+|...+|+.||||++...... .+.+.+|++++++++|||||++++++.+++..++||||+++
T Consensus 6 ~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~- 84 (288)
T 1ob3_A 6 GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ- 84 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-
T ss_pred hhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-
Confidence 66889999999999999888999999999754322 46788999999999999999999999999999999999985
Q ss_pred Chhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Ccc
Q 005177 527 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPA 601 (710)
Q Consensus 527 sL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~ 601 (710)
+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ ...
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 161 (288)
T 1ob3_A 85 DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEI 161 (288)
T ss_dssp EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------
T ss_pred CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcccccccccc
Confidence 99988864 468889999999999999999998 9999999999999999999999999998765422111 112
Q ss_pred cccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCC---------------cccccccccccccccccC
Q 005177 602 KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKPIDGLLGEMYNENEVG 665 (710)
Q Consensus 602 ~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~---------------~~~~~~~~~~~~~~~~~~ 665 (710)
++..|.+||.... ..++.++||||+||++|||+||+.||.+..... .|........ .++....
T Consensus 162 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 240 (288)
T 1ob3_A 162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK-YDPNFTV 240 (288)
T ss_dssp CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT-CCTTCCC
T ss_pred ccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccc-ccccccc
Confidence 3445778887754 458899999999999999999999987432110 0110000000 0000000
Q ss_pred -CC----cchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 666 -SS----SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 666 -~~----~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+ .........+.+++.+|++.||++|||+.|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00 0001123456789999999999999999999863
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-38 Score=322.33 Aligned_cols=245 Identities=20% Similarity=0.267 Sum_probs=191.5
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcC--CceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|+. +|+.||||+++... ...+.+.+|++++++++|||||++++++.+. +..++||||++
T Consensus 14 ~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (271)
T 3kmu_A 14 FLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92 (271)
T ss_dssp EEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCT
T ss_pred HHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccC
Confidence 678899999999999997 48899999998642 3356789999999999999999999999887 78899999999
Q ss_pred CCChhhhhhcC----CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCc
Q 005177 525 NGNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFP 600 (710)
Q Consensus 525 ~gsL~~~l~~~----~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~ 600 (710)
+|+|.+++... .++..+..++.|+++||+|||+. .++|+||||||+||+++.++.++|+|||++...... ..
T Consensus 93 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~---~~ 168 (271)
T 3kmu_A 93 YGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP---GR 168 (271)
T ss_dssp TCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCT---TC
T ss_pred CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEeccceeeeccc---Cc
Confidence 99999999762 68999999999999999999997 123999999999999999999999999887543321 11
Q ss_pred ccccccCchhhhhccCC---ccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 601 AKIAWTESGEFYNAMKE---EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 601 ~~~~~~~~~e~~~~~~~---~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
.++..|.+||....... +.++|||||||++|||+||+.|+.+...... ..........+. . +. .....+
T Consensus 169 ~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~~~~~~~~~~-~--~~---~~~~~~ 240 (271)
T 3kmu_A 169 MYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI--GMKVALEGLRPT-I--PP---GISPHV 240 (271)
T ss_dssp BSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH--HHHHHHSCCCCC-C--CT---TCCHHH
T ss_pred cCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH--HHHHHhcCCCCC-C--CC---CCCHHH
Confidence 23345778887765443 3479999999999999999999864322110 000000100111 0 11 122457
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 678 LDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
.+++.+||+.||++|||++|+++.|+.+++
T Consensus 241 ~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 241 SKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 788899999999999999999999998865
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-38 Score=328.90 Aligned_cols=240 Identities=18% Similarity=0.147 Sum_probs=183.5
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 518 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||++.... .....+..|+..+.++ +|||||+++++|.+++..++
T Consensus 57 ~~y~--~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 57 QSFQ--RLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHEE--EEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhee--eeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 4466 778999999999999986 489999999986532 2233344455555544 89999999999999999999
Q ss_pred EEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 519 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
||||+ +|+|.+++.. .++|..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 135 v~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~ 210 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA 210 (311)
T ss_dssp EEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC--
T ss_pred EEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecccC
Confidence 99999 6799988865 579999999999999999999998 9999999999999999999999999998765432
Q ss_pred CCC-CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 596 DGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 596 ~~~-~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
... ...++..|.+||+..+ .++.++|||||||++|||++|+.|+....... .+.... .. ........
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~---------~~~~~~-~~-~~~~~~~~ 278 (311)
T 3p1a_A 211 GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQ---------QLRQGY-LP-PEFTAGLS 278 (311)
T ss_dssp ----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHH---------HHTTTC-CC-HHHHTTSC
T ss_pred CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHH---------HHhccC-CC-cccccCCC
Confidence 211 1224455778887765 78899999999999999999987765332111 110000 00 00111123
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..+.+++.+|++.||++|||+.|++++
T Consensus 279 ~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 279 SELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 567789999999999999999999863
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-38 Score=335.60 Aligned_cols=241 Identities=18% Similarity=0.177 Sum_probs=191.8
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCcee
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 517 (710)
++|. ..+.||+|+||.||+|.. .+|+.||||.++... ...+.+..|.+++.++ +|||||++++++.+++..|
T Consensus 17 ~~y~--~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 17 EDFI--LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp TTEE--EEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred HHeE--EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 3455 778999999999999986 579999999998642 2345677888888876 8999999999999999999
Q ss_pred EEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 518 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
+||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 95 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 171 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 171 (345)
T ss_dssp EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhcccC
Confidence 99999999999999975 678999999999999999999999 9999999999999999999999999999754221
Q ss_pred C--CCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 596 D--GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 596 ~--~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
. .....++..|.+||......++.++||||+||++|||+||+.||.+..... ....+.... ...+.. .
T Consensus 172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~------~~~~i~~~~-~~~p~~---~ 241 (345)
T 1xjd_A 172 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE------LFHSIRMDN-PFYPRW---L 241 (345)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-CCCCTT---S
T ss_pred CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHH------HHHHHHhCC-CCCCcc---c
Confidence 1 112224556788898888889999999999999999999999986432111 111111111 111111 2
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHH-HHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPSME-EAL 699 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~-evl 699 (710)
...+.+++.+|++.||++||++. |+.
T Consensus 242 s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 242 EKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp CHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred CHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 24567889999999999999997 654
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=332.82 Aligned_cols=252 Identities=15% Similarity=0.160 Sum_probs=193.9
Q ss_pred hhhhhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc------hhHHHHHHHHHHHhccCCCCceeEEEEEE
Q 005177 439 ANDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA------TRIKIVSEFITRIGTVRHKNLIRLLGFCY 511 (710)
Q Consensus 439 ~~~~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~------~~~~~~~~e~~~l~~l~H~niv~l~g~~~ 511 (710)
..++.+.|. ..+.||+|+||.||+|.. .++..||||.+.... ...+.+.+|++++++++|||||++++++.
T Consensus 21 ~~~~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~ 98 (345)
T 3hko_A 21 LLELQKKYH--LKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYE 98 (345)
T ss_dssp HHHHHHHEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhhhhhhee--ecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhc
Confidence 355666777 788999999999999985 678899999997532 23567899999999999999999999999
Q ss_pred cCCceeEEEeecCCCChhhhhhc------------------------------------------CCCHHHHHHHHHHHH
Q 005177 512 NRHQAYLLYDYLPNGNLSEKIRT------------------------------------------KRDWAAKYKIVLGVA 549 (710)
Q Consensus 512 ~~~~~~lv~Ey~~~gsL~~~l~~------------------------------------------~~~~~~~~~i~~~ia 549 (710)
+++..++||||+++|+|.+++.. ..++.....++.|++
T Consensus 99 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~ 178 (345)
T 3hko_A 99 DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIF 178 (345)
T ss_dssp CSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHH
T ss_pred cCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHH
Confidence 99999999999999999999852 113455678999999
Q ss_pred HHHHHHhcCCCCCceecCCCCCCeEecCCC--ceEEcccCccccccccCC------CCcccccccCchhhhhc--cCCcc
Q 005177 550 RGLCFLHHDCYPAIPHGDLKASNIVFDENM--EPHLAEFGFKYLTQLADG------SFPAKIAWTESGEFYNA--MKEEM 619 (710)
Q Consensus 550 ~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~--~~kl~DfGla~~~~~~~~------~~~~~~~~~~~~e~~~~--~~~~~ 619 (710)
+||+|||+. +|+||||||+||+++.++ .+||+|||+++....... ....++..|.+||.... ..++.
T Consensus 179 ~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 255 (345)
T 3hko_A 179 SALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP 255 (345)
T ss_dssp HHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCT
T ss_pred HHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCc
Confidence 999999999 999999999999998766 899999999986532111 11124455778887754 56788
Q ss_pred ccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 005177 620 YMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEAL 699 (710)
Q Consensus 620 ~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl 699 (710)
++|||||||++|||+||+.|+.+..... ...++.........+........+.+++.+|++.||++|||+.|++
T Consensus 256 ~~DiwslG~il~el~~g~~pf~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l 329 (345)
T 3hko_A 256 KCDAWSAGVLLHLLLMGAVPFPGVNDAD------TISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRAL 329 (345)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCChHH------HHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHh
Confidence 9999999999999999999986433211 1111111110111111122235677899999999999999999998
Q ss_pred HH
Q 005177 700 KL 701 (710)
Q Consensus 700 ~~ 701 (710)
+.
T Consensus 330 ~h 331 (345)
T 3hko_A 330 QH 331 (345)
T ss_dssp HS
T ss_pred cC
Confidence 74
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-37 Score=321.76 Aligned_cols=248 Identities=20% Similarity=0.237 Sum_probs=188.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++++++|||||++++++.+++..++||||+++
T Consensus 6 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 85 (292)
T 3o0g_A 6 KLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ 85 (292)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC
Confidence 678899999999999986 5799999999985432 346788999999999999999999999999999999999985
Q ss_pred CChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Cc
Q 005177 526 GNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FP 600 (710)
Q Consensus 526 gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~ 600 (710)
++.+.+.. .+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ ..
T Consensus 86 -~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 161 (292)
T 3o0g_A 86 -DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAE 161 (292)
T ss_dssp -EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCSC
T ss_pred -CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCccccccCC
Confidence 66555532 678999999999999999999999 9999999999999999999999999999865432211 12
Q ss_pred ccccccCchhhhhccC-CccccceeeHHHHHHHHHhCCCCCCCCCCCCc----------------cccccccccccc---
Q 005177 601 AKIAWTESGEFYNAMK-EEMYMDVYGFGEIILEILTNGRLTNAGSSLQN----------------KPIDGLLGEMYN--- 660 (710)
Q Consensus 601 ~~~~~~~~~e~~~~~~-~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~----------------~~~~~~~~~~~~--- 660 (710)
.++.+|.+||...+.. ++.++||||+||++|||+||+.|+..+..... |...........
T Consensus 162 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (292)
T 3o0g_A 162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPM 241 (292)
T ss_dssp CSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCC
T ss_pred ccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccccccccc
Confidence 2345577888876554 79999999999999999999999764432111 000000000000
Q ss_pred -ccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 661 -ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 661 -~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+...............+.+++.+|++.||++|||++|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 242 YPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00000000111223467789999999999999999999864
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=321.92 Aligned_cols=242 Identities=17% Similarity=0.222 Sum_probs=191.2
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
+|. ..+.||+|+||.||+|.. .++..||||.+..... ..+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 10 DFE--IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cEE--EeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 355 678899999999999985 6688999999975422 256688999999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
|||+++|+|.+++.. ..++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 88 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~ 164 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 164 (279)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCcccc
Confidence 999999999999865 578899999999999999999998 999999999999999999999999999865443222
Q ss_pred CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 598 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 598 ~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
....+...+.+||......++.++||||+|+++|||++|+.|+....... ....+.... ...+.. ....+
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~-~~~~~~---~~~~~ 234 (279)
T 3fdn_A 165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE------TYKRISRVE-FTFPDF---VTEGA 234 (279)
T ss_dssp ---CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHHTC-CCCCTT---SCHHH
T ss_pred cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH------HHHHHHhCC-CCCCCc---CCHHH
Confidence 22234455778898888888999999999999999999999986432111 011111111 111111 12356
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 678 LDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+++.+|++.||++|||++|++++
T Consensus 235 ~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 235 RDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred HHHHHHHhccChhhCCCHHHHhhC
Confidence 688999999999999999999874
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-38 Score=329.45 Aligned_cols=246 Identities=18% Similarity=0.215 Sum_probs=195.3
Q ss_pred hhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccc--hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 520 (710)
..+.||+|+||.||+|.. .+++.||||.++... ...+.+.+|+++++++ +||||+++++++.+++..++||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 106 (313)
T 1t46_A 27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 106 (313)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEE
Confidence 678899999999999973 467899999998643 2357789999999999 8999999999999999999999
Q ss_pred eecCCCChhhhhhcC--------------------CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc
Q 005177 521 DYLPNGNLSEKIRTK--------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580 (710)
Q Consensus 521 Ey~~~gsL~~~l~~~--------------------~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~ 580 (710)
||+++|+|.+++... .++..+..++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 107 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 183 (313)
T 1t46_A 107 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRI 183 (313)
T ss_dssp ECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEETTTE
T ss_pred ecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEcCCCC
Confidence 999999999999652 68899999999999999999998 9999999999999999999
Q ss_pred eEEcccCccccccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccc
Q 005177 581 PHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLL 655 (710)
Q Consensus 581 ~kl~DfGla~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~ 655 (710)
+||+|||+++........ ...+...+.+||......++.++|||||||++|||+| |+.|+........ . ....
T Consensus 184 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-~-~~~~ 261 (313)
T 1t46_A 184 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-F-YKMI 261 (313)
T ss_dssp EEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH-H-HHHH
T ss_pred EEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH-H-HHHh
Confidence 999999998765432211 1112334778888888889999999999999999999 8888764322110 0 0000
Q ss_pred cccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 656 GEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
....... .+. .....+.+++.+|++.||++|||+.|++++|+++-
T Consensus 262 ~~~~~~~---~~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 262 KEGFRML---SPE---HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp HHTCCCC---CCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccCCCCC---Ccc---cCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 1110100 011 12245778899999999999999999999998753
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=331.35 Aligned_cols=244 Identities=15% Similarity=0.123 Sum_probs=190.3
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
..+.||+|+||.||+|.. .+|+.||||.++... ...+.+.+|++++.++ +|||||++++++.+++..|+||||+
T Consensus 13 ~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~ 92 (345)
T 3a8x_A 13 LLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYV 92 (345)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCC
Confidence 678999999999999986 578999999998642 2355678899999887 8999999999999999999999999
Q ss_pred CCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC--CCC
Q 005177 524 PNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--GSF 599 (710)
Q Consensus 524 ~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~--~~~ 599 (710)
++|+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 93 ~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~~~~ 169 (345)
T 3a8x_A 93 NGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST 169 (345)
T ss_dssp CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCCBCC
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCCCCcccc
Confidence 99999999965 578899999999999999999998 99999999999999999999999999997532211 112
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc---cccccccccccccccCCCcchHHHHHH
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK---PIDGLLGEMYNENEVGSSSSLQDEIKL 676 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (710)
..++..|.+||......++.++||||+||++|||+||+.||......... ........+.... ...+. .....
T Consensus 170 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~-~~~p~---~~s~~ 245 (345)
T 3a8x_A 170 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-IRIPR---SLSVK 245 (345)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCC-CCCCT---TSCHH
T ss_pred cCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCC-CCCCC---CCCHH
Confidence 22455678889888888999999999999999999999998642211100 0000111111111 11111 12345
Q ss_pred HHHHHhhcCCCCCCCCCCH------HHHHH
Q 005177 677 VLDVALLCTRSTPSDRPSM------EEALK 700 (710)
Q Consensus 677 ~~~l~~~Cl~~~p~~RPs~------~evl~ 700 (710)
+.+++.+|++.||++||++ .|+++
T Consensus 246 ~~~li~~lL~~dP~~R~~~~~~~~~~~i~~ 275 (345)
T 3a8x_A 246 AASVLKSFLNKDPKERLGCHPQTGFADIQG 275 (345)
T ss_dssp HHHHHHHHTCSSTTTSTTCCTTTHHHHHHT
T ss_pred HHHHHHHHhcCCHhHCCCCCCcCCHHHHhc
Confidence 6788999999999999995 56654
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=334.96 Aligned_cols=246 Identities=20% Similarity=0.225 Sum_probs=183.1
Q ss_pred hhhhhcCCCCCccEEEEc--CC--CcEEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEc-CCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVL--PT--GITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYN-RHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~--~~--g~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-~~~~~lv~Ey 522 (710)
..+.||+|+||.||+|.. .+ +..||||.++.. ....+.+.+|++++++++|||||+++++|.+ ++..++||||
T Consensus 93 ~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~ 172 (373)
T 3c1x_A 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 172 (373)
T ss_dssp EEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEEC
T ss_pred cCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEEC
Confidence 457899999999999985 23 247899998753 2346778999999999999999999999865 4578999999
Q ss_pred cCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC-
Q 005177 523 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 598 (710)
Q Consensus 523 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~- 598 (710)
+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 173 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~ 249 (373)
T 3c1x_A 173 MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 249 (373)
T ss_dssp CTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------------
T ss_pred CCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccccccccc
Confidence 999999999975 467889999999999999999998 9999999999999999999999999999765322110
Q ss_pred -----CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 599 -----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 599 -----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
.......|.+||......++.++|||||||++|||+||+.|+..+....... ..+........+.. .
T Consensus 250 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~-----~~~~~~~~~~~p~~---~ 321 (373)
T 3c1x_A 250 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-----VYLLQGRRLLQPEY---C 321 (373)
T ss_dssp --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHH-----HHHHTTCCCCCCTT---C
T ss_pred ccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHH-----HHHHcCCCCCCCCC---C
Confidence 1112234778888888889999999999999999999655444332221111 01111110111111 1
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
...+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 322 ~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~ 354 (373)
T 3c1x_A 322 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 354 (373)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 235678899999999999999999999998763
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=328.74 Aligned_cols=249 Identities=18% Similarity=0.178 Sum_probs=196.9
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-------hHHHHHHHHHHHhccCCCCceeEEEEEEc
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-------RIKIVSEFITRIGTVRHKNLIRLLGFCYN 512 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-------~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 512 (710)
.+.+.|. ..+.||+|+||.||+|.. .+|+.||||.+..... ..+.+.+|++++++++||||+++++++.+
T Consensus 9 ~~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 86 (321)
T 2a2a_A 9 KVEDFYD--IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN 86 (321)
T ss_dssp CHHHHEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhccEE--EeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEec
Confidence 3445566 778999999999999985 5799999999986422 25678999999999999999999999999
Q ss_pred CCceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC----ceEEccc
Q 005177 513 RHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM----EPHLAEF 586 (710)
Q Consensus 513 ~~~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~----~~kl~Df 586 (710)
++..++||||+++|+|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++ .+||+||
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Df 163 (321)
T 2a2a_A 87 RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (321)
T ss_dssp SSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccC
Confidence 9999999999999999999975 457889999999999999999998 999999999999999887 7999999
Q ss_pred CccccccccCC-CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccC
Q 005177 587 GFKYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 665 (710)
Q Consensus 587 Gla~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (710)
|+++....... ....+...|.+||......++.++|||||||++|||+||+.|+.+..... ....+.... ..
T Consensus 164 g~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~i~~~~-~~ 236 (321)
T 2a2a_A 164 GLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE------TLANITSVS-YD 236 (321)
T ss_dssp TTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHTTC-CC
T ss_pred ccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhcc-cc
Confidence 99976543221 11224455788898888888999999999999999999999986432111 011111111 00
Q ss_pred CCcc-hHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 666 SSSS-LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 666 ~~~~-~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+.. .......+.+++.+|++.||++|||+.|++++
T Consensus 237 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 237 FDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp CCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred cChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0100 11123457789999999999999999999874
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=341.75 Aligned_cols=309 Identities=23% Similarity=0.255 Sum_probs=242.2
Q ss_pred EEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCC
Q 005177 79 GINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFS 158 (710)
Q Consensus 79 ~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~ 158 (710)
.+++++++++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|||++
T Consensus 4 ~l~ls~n~l~-~ip~~~~----~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 78 (520)
T 2z7x_B 4 LVDRSKNGLI-HVPKDLS----QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSH 78 (520)
T ss_dssp EEECTTSCCS-SCCCSCC----TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCS
T ss_pred eEecCCCCcc-ccccccc----ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCC
Confidence 4788999998 5776653 6899999999999988888999999999999999999999899999999999999999
Q ss_pred CCCCcCCchhccCCCCCCEEEccCCCCCC-CCCcccCCCCCCCeEEecCCcCCCCCcccccccccc--cccccccccc--
Q 005177 159 NSFSGSVPAEISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV--THMEIGYNFY-- 233 (710)
Q Consensus 159 N~l~~~~p~~~~~L~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~l~~n~~-- 233 (710)
|+++ .+|.. .+++|++|+|++|.+++ .+|..|+++++|++|++++|.+++ ..+..+++| +.|++++|.+
T Consensus 79 N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~ 152 (520)
T 2z7x_B 79 NKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYG 152 (520)
T ss_dssp SCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTT
T ss_pred Ccee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccc
Confidence 9999 57776 89999999999999997 588999999999999999999986 456777777 9999999998
Q ss_pred cccCCccccCCC--------------------------------------------------------------------
Q 005177 234 QGNIPWQLGNMS-------------------------------------------------------------------- 245 (710)
Q Consensus 234 ~g~~p~~l~~l~-------------------------------------------------------------------- 245 (710)
.+..|..+..+.
T Consensus 153 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 153 EKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEE
T ss_pred cccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhcccccccc
Confidence 666666655532
Q ss_pred ---------------ccchhccccccCCccCchhc-----cCCCCCcEEEccccccCCCCCc-c----------------
Q 005177 246 ---------------EVQYLDIAGANLSGSIPKEL-----SNLTKLESLFLFRNQLAGQVPW-E---------------- 288 (710)
Q Consensus 246 ---------------~L~~L~ls~n~l~g~~p~~l-----~~l~~L~~L~L~~n~l~~~~p~-~---------------- 288 (710)
+|++|++++|+++|.+|..+ ..+++|+.++++.|.+ .+|. .
T Consensus 233 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~ 310 (520)
T 2z7x_B 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVS 310 (520)
T ss_dssp EHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEE
T ss_pred CHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcC
Confidence 56666666666777777666 4555444444444444 2220 0
Q ss_pred ---------ccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcc--cCCcccCCCCCCcEEeccCCCCCCCC
Q 005177 289 ---------FSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSG--TVPESLVQLPSLEILFIWNNYFSGSL 357 (710)
Q Consensus 289 ---------~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~L~~N~l~g~~ 357 (710)
+..+++|++|++++|++++.+|..++.+++|+.|++++|++++ .+|..+..+++|++|++++|.+++.+
T Consensus 311 ~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l 390 (520)
T 2z7x_B 311 GTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDE 390 (520)
T ss_dssp SSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCG
T ss_pred CCccccccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCccc
Confidence 1466777888888888877777777788888888888888775 55667777788888888888887756
Q ss_pred Ccc-cCCCCCCcEEECCCCcCCccCcccccCCCceeeEecccCCcc
Q 005177 358 PEN-LGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFT 402 (710)
Q Consensus 358 p~~-l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~l~ 402 (710)
|.. +..+++|+.|++++|.+++.+|..+. +.|+.|++++|+++
T Consensus 391 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~ 434 (520)
T 2z7x_B 391 KKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK 434 (520)
T ss_dssp GGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC
T ss_pred ccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc
Confidence 654 66677777777777777777776553 56777777777777
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-38 Score=343.71 Aligned_cols=247 Identities=15% Similarity=0.087 Sum_probs=193.0
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
++|. ..+.||+|+||.||+|.. .+|+.||||+++.... ..+.+.+|+++++.++|||||+++++|.+++..|+
T Consensus 69 ~~y~--~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 146 (410)
T 3v8s_A 69 EDYE--VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYM 146 (410)
T ss_dssp GGEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccE--EEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence 3455 778999999999999986 5789999999976321 24457889999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC-
Q 005177 519 LYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD- 596 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~- 596 (710)
|||||++|+|.++++. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 147 V~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~ 223 (410)
T 3v8s_A 147 VMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 223 (410)
T ss_dssp EECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSE
T ss_pred EEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEeeccCCc
Confidence 9999999999999975 568888999999999999999998 99999999999999999999999999997654321
Q ss_pred --CCCcccccccCchhhhhccC----CccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcch
Q 005177 597 --GSFPAKIAWTESGEFYNAMK----EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 670 (710)
Q Consensus 597 --~~~~~~~~~~~~~e~~~~~~----~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (710)
.....++..|.+||+..... ++.++|||||||++|||+||+.||.+..... ....+.........+..
T Consensus 224 ~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~------~~~~i~~~~~~~~~p~~ 297 (410)
T 3v8s_A 224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG------TYSKIMNHKNSLTFPDD 297 (410)
T ss_dssp EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTHHHHCCCCTT
T ss_pred ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhh------HHHHHHhccccccCCCc
Confidence 11223455677888876554 7789999999999999999999987443211 11111111000000100
Q ss_pred HHHHHHHHHHHhhcCCCCCCC--CCCHHHHHHH
Q 005177 671 QDEIKLVLDVALLCTRSTPSD--RPSMEEALKL 701 (710)
Q Consensus 671 ~~~~~~~~~l~~~Cl~~~p~~--RPs~~evl~~ 701 (710)
......+.+++.+|+..+|++ ||+++||.++
T Consensus 298 ~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 298 NDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp CCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred ccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 112345678888999999998 9999999875
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=331.60 Aligned_cols=241 Identities=13% Similarity=0.109 Sum_probs=195.4
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
.|. ..+.||+|+||.||++.. .+|+.||||.+.... ...+.+.+|++++++++|||||++++++.+++..|+|
T Consensus 42 ~y~--~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 42 QFD--RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HCE--EEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 455 778999999999999986 579999999997642 2356788899999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
|||+++|+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 120 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~ 196 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196 (350)
T ss_dssp EECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCCcc
Confidence 999999999999975 578899999999999999999998 999999999999999999999999999986643322
Q ss_pred CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 598 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 598 ~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
. ..++..|.+||......++.++|||||||++|||++|+.||....... ....+.... ...+.. ....+
T Consensus 197 ~-~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~------~~~~i~~~~-~~~p~~---~~~~~ 265 (350)
T 1rdq_E 197 T-LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSGK-VRFPSH---FSSDL 265 (350)
T ss_dssp C-CEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-CCCCTT---CCHHH
T ss_pred c-ccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH------HHHHHHcCC-CCCCCC---CCHHH
Confidence 2 234555788898888889999999999999999999999987432111 111111111 111111 22456
Q ss_pred HHHHhhcCCCCCCCCCC-----HHHHHHH
Q 005177 678 LDVALLCTRSTPSDRPS-----MEEALKL 701 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs-----~~evl~~ 701 (710)
.+++.+|++.||++||+ ++|+.++
T Consensus 266 ~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 266 KDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp HHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 78899999999999998 8888753
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=351.98 Aligned_cols=245 Identities=17% Similarity=0.214 Sum_probs=196.5
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.||+|+||.||+|....+..||||+++......+.|.+|++++++++|||||++++++.+ +..++|||||++|+|.
T Consensus 271 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~ 349 (535)
T 2h8h_A 271 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 349 (535)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHH
T ss_pred hheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHH
Confidence 667899999999999998888899999998766566789999999999999999999999876 6789999999999999
Q ss_pred hhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC---CCCccc
Q 005177 530 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD---GSFPAK 602 (710)
Q Consensus 530 ~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~---~~~~~~ 602 (710)
++++. .+++.++..|+.||++||+|||+. +|+||||||+|||++.++.+||+|||+++...... ......
T Consensus 350 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~ 426 (535)
T 2h8h_A 350 DFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 426 (535)
T ss_dssp HHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTS
T ss_pred HHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcC
Confidence 99974 478999999999999999999998 99999999999999999999999999998653211 111112
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHH
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 681 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 681 (710)
...+.+||......++.++|||||||++|||+| |+.|+.+..... ....+........+. .....+.+++
T Consensus 427 ~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~------~~~~i~~~~~~~~~~---~~~~~l~~li 497 (535)
T 2h8h_A 427 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE------VLDQVERGYRMPCPP---ECPESLHDLM 497 (535)
T ss_dssp CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH------HHHHHHTTCCCCCCT---TCCHHHHHHH
T ss_pred cccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCCCCCC---CCCHHHHHHH
Confidence 233667888888889999999999999999999 788876432111 111111111011111 1224567889
Q ss_pred hhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 682 LLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 682 ~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
.+||+.||++|||++++++.|+.+-.
T Consensus 498 ~~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 498 CQCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred HHHcCCChhHCcCHHHHHHHHHHHhh
Confidence 99999999999999999999998753
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-36 Score=347.22 Aligned_cols=325 Identities=17% Similarity=0.108 Sum_probs=258.1
Q ss_pred CcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEE
Q 005177 75 TIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVL 154 (710)
Q Consensus 75 ~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L 154 (710)
..+..++++++.+.+..|..+.. +++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..++++++|++|
T Consensus 56 ~~L~~L~Ls~n~l~~i~~~~~~~--l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 133 (606)
T 3vq2_A 56 SELQWLDLSRCEIETIEDKAWHG--LHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKL 133 (606)
T ss_dssp TTCCEEECTTCCCCEECTTTTTT--CTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEE
T ss_pred ccCcEEeCCCCcccccCHHHhhc--hhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEE
Confidence 35778888888888777777777 8889999999999988888888899999999999999888777888889999999
Q ss_pred ECCCCCCCc-CCchhccCCCCCCEEEccCCCCCCCCCcccCC--------------------------------------
Q 005177 155 DAFSNSFSG-SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGS-------------------------------------- 195 (710)
Q Consensus 155 ~L~~N~l~~-~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~-------------------------------------- 195 (710)
++++|.+++ .+|..++++++|++|+|++|++++..|..|+.
T Consensus 134 ~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~ 213 (606)
T 3vq2_A 134 NVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRG 213 (606)
T ss_dssp ECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEES
T ss_pred eCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccC
Confidence 999998876 67888888888988888888877655543322
Q ss_pred --------------------------------------------------------------------------------
Q 005177 196 -------------------------------------------------------------------------------- 195 (710)
Q Consensus 196 -------------------------------------------------------------------------------- 195 (710)
T Consensus 214 n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~ 293 (606)
T 3vq2_A 214 NFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLA 293 (606)
T ss_dssp CCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEE
T ss_pred CccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEec
Confidence
Q ss_pred ------------CCCCCeEEecCCcCCCCCcc--------------------ccccccccccccccccccccc--CCccc
Q 005177 196 ------------FKSLEFLHLAGNLLNDQIPA--------------------ELGMLKTVTHMEIGYNFYQGN--IPWQL 241 (710)
Q Consensus 196 ------------l~~L~~L~L~~N~l~~~~p~--------------------~l~~l~~L~~L~l~~n~~~g~--~p~~l 241 (710)
+++|+.|++++|.+ +.+|. .++.+++|++|++++|.+++. +|..+
T Consensus 294 ~~~~~~l~~l~~~~~L~~L~l~~n~l-~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~ 372 (606)
T 3vq2_A 294 GVSIKYLEDVPKHFKWQSLSIIRCQL-KQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSD 372 (606)
T ss_dssp SCCCCCCCCCCTTCCCSEEEEESCCC-SSCCCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHH
T ss_pred CccchhhhhccccccCCEEEcccccC-cccccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhh
Confidence 12333333333333 22331 233566778888888888765 47788
Q ss_pred cCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCC-ccccCCCCCCEEEccCCCCCCCCCccccCCCCCC
Q 005177 242 GNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVP-WEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLR 320 (710)
Q Consensus 242 ~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 320 (710)
..+++|++|++++|.+++ +|..+..+++|+.|++++|.+.+..| ..+..+++|+.|++++|++.+..|..+..+++|+
T Consensus 373 ~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 451 (606)
T 3vq2_A 373 LGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLN 451 (606)
T ss_dssp HCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCC
T ss_pred ccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCC
Confidence 888889999998888875 55778888888888888888888777 5778888888888888888888888888888888
Q ss_pred EEEcccccCcc-cCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecccC
Q 005177 321 LLSLMYNEMSG-TVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSN 399 (710)
Q Consensus 321 ~L~Ls~N~l~g-~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N 399 (710)
.|++++|++++ .+|..+..+++|++|++++|.+++..|..+..+++|+.|++++|++++.+|..+..+++|+.|++++|
T Consensus 452 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 531 (606)
T 3vq2_A 452 TLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFN 531 (606)
T ss_dssp EEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTS
T ss_pred EEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCC
Confidence 88888888887 46788888888888888888888888888888888888888888888888888888888888888888
Q ss_pred Cccc
Q 005177 400 NFTG 403 (710)
Q Consensus 400 ~l~g 403 (710)
+++.
T Consensus 532 ~l~~ 535 (606)
T 3vq2_A 532 RIET 535 (606)
T ss_dssp CCCC
T ss_pred cCcc
Confidence 8874
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-37 Score=325.60 Aligned_cols=253 Identities=14% Similarity=0.171 Sum_probs=189.7
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc----chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~----~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
..|. ..+.||+|+||.||+|.. .+|+.||||+++.. ....+.+.+|++++++++||||+++++++.+++..++
T Consensus 32 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 32 ANFR--IEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp GGEE--EEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cceE--EEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 3455 778999999999999985 68999999999752 2345678899999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccc
Q 005177 519 LYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 592 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~ 592 (710)
||||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 9999999999999853 468889999999999999999998 9999999999999999999999999998765
Q ss_pred cccCCC--CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcch
Q 005177 593 QLADGS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 670 (710)
Q Consensus 593 ~~~~~~--~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (710)
...... ...+...+.+||......++.++|||||||++|||+||+.|+.+......... ........+. .. ..
T Consensus 187 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~~~~~~-~~-~~-- 261 (310)
T 2wqm_A 187 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC-KKIEQCDYPP-LP-SD-- 261 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHH-HHHHTTCSCC-CC-TT--
T ss_pred cCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHH-HHhhcccCCC-Cc-cc--
Confidence 432111 11234457788988888889999999999999999999999864321110000 0000100000 00 01
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 671 QDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 671 ~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
.....+.+++.+||+.||++|||+.|+++.|+++++
T Consensus 262 -~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~ 297 (310)
T 2wqm_A 262 -HYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA 297 (310)
T ss_dssp -TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -ccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 122456788999999999999999999999998864
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-38 Score=325.04 Aligned_cols=243 Identities=18% Similarity=0.217 Sum_probs=190.5
Q ss_pred hhhhhcCCCCCccEEEEcC-CC-------cEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVLP-TG-------ITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~-~g-------~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 520 (710)
..+.||+|+||.||+|... +| ..||+|.+.... ...+.+.+|++++++++|||||++++++.+++..++||
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 91 (289)
T 4fvq_A 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQ 91 (289)
T ss_dssp EEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEE
T ss_pred eeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEE
Confidence 6688999999999999853 33 579999997643 34677899999999999999999999999999999999
Q ss_pred eecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc--------eEEcccCcc
Q 005177 521 DYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME--------PHLAEFGFK 589 (710)
Q Consensus 521 Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~--------~kl~DfGla 589 (710)
||+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++. +||+|||++
T Consensus 92 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~ 168 (289)
T 4fvq_A 92 EFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS 168 (289)
T ss_dssp ECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSC
T ss_pred ECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeeeccCccc
Confidence 99999999999975 378999999999999999999999 9999999999999998887 999999998
Q ss_pred ccccccCCCCcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCc
Q 005177 590 YLTQLADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 668 (710)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (710)
+...... ...+...|.+||.... ..++.++|||||||++|||+||+.|+.......... .......... .
T Consensus 169 ~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~-----~~~~~~~~~~--~ 239 (289)
T 4fvq_A 169 ITVLPKD--ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKL-----QFYEDRHQLP--A 239 (289)
T ss_dssp TTTSCHH--HHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH-----HHHHTTCCCC--C
T ss_pred ccccCcc--ccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHH-----HHhhccCCCC--C
Confidence 6543211 1112334677887766 678999999999999999999877665433211100 0000000011 1
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 669 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 669 ~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
.. ...+.+++.+||+.||++|||++|+++.|+++-.
T Consensus 240 ~~---~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 240 PK---AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp CS---SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred CC---CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 01 1246678889999999999999999999998853
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-37 Score=324.05 Aligned_cols=250 Identities=18% Similarity=0.277 Sum_probs=192.1
Q ss_pred hhhhhcCCCCCccEEEE-----cCCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcC--CceeEEE
Q 005177 450 ECEEAARPQSAAGCKAV-----LPTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~-----~~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ 520 (710)
..+.||+|+||.||+|. ..+|+.||||+++... ...+.+.+|++++++++||||+++++++.+. +..++||
T Consensus 25 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 104 (302)
T 4e5w_A 25 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIM 104 (302)
T ss_dssp EEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEE
T ss_pred hhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEE
Confidence 67889999999999998 3578999999997543 2357789999999999999999999999876 6689999
Q ss_pred eecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 521 DYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 521 Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
||+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 105 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 181 (302)
T 4e5w_A 105 EFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE 181 (302)
T ss_dssp ECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCC
T ss_pred EeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccccccCCCc
Confidence 99999999999954 578999999999999999999998 999999999999999999999999999976543211
Q ss_pred -----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCC---------Ccccccccccccccccc
Q 005177 598 -----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSL---------QNKPIDGLLGEMYNENE 663 (710)
Q Consensus 598 -----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~---------~~~~~~~~~~~~~~~~~ 663 (710)
....+...+.+||......++.++||||+||++|||+||+.|+...... ...........+.....
T Consensus 182 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (302)
T 4e5w_A 182 YYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKR 261 (302)
T ss_dssp EEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCC
T ss_pred ceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCC
Confidence 1112333467888888888889999999999999999999875421100 00000000011111110
Q ss_pred cCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 664 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 664 ~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
...+. .....+.+++.+||+.||++|||+.|+++.|+.+
T Consensus 262 ~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 300 (302)
T 4e5w_A 262 LPCPP---NCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300 (302)
T ss_dssp CCCCT---TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCC---CCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 11111 1234677899999999999999999999999875
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-36 Score=359.05 Aligned_cols=313 Identities=21% Similarity=0.245 Sum_probs=263.7
Q ss_pred ceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccC-CccccCCCCCcEEECcCCCCCCCC
Q 005177 63 CSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQF-PVEIFNLTSLISLDISRNNFSGHF 141 (710)
Q Consensus 63 C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~ 141 (710)
|.|+.|-+ ....++.++++.+.+++..+..+.. +++|++|||++|.+.+.+ |..|.++++|++|+|++|.+++..
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~--l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~ 89 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPF--LEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLH 89 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSS--CCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEEC
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcc--cccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccC
Confidence 46777776 2467889999999999888888888 999999999999777776 778999999999999999999999
Q ss_pred ChhhcCCCCCCEEECCCCCCCcCCchh--ccCCCCCCEEEccCCCCCCCCC-cccCCCCCCCeEEecCCcCCCCCccccc
Q 005177 142 PGGIQSLRNLLVLDAFSNSFSGSVPAE--ISQLEHLKVLNLAGSYFSGPIP-SQFGSFKSLEFLHLAGNLLNDQIPAELG 218 (710)
Q Consensus 142 p~~l~~L~~L~~L~L~~N~l~~~~p~~--~~~L~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 218 (710)
|..|+++++|++|+|++|.+++.+|.. +.++++|++|+|++|.+++..| ..|+++++|++|+|++|.+++..|..+.
T Consensus 90 p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~ 169 (844)
T 3j0a_A 90 PDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELE 169 (844)
T ss_dssp TTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGH
T ss_pred HhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcc
Confidence 999999999999999999999877766 9999999999999999987655 5799999999999999999999999988
Q ss_pred cc--ccccccccccccccccCCccccCCCc------cchhccccccCCccCchhccC-----------------------
Q 005177 219 ML--KTVTHMEIGYNFYQGNIPWQLGNMSE------VQYLDIAGANLSGSIPKELSN----------------------- 267 (710)
Q Consensus 219 ~l--~~L~~L~l~~n~~~g~~p~~l~~l~~------L~~L~ls~n~l~g~~p~~l~~----------------------- 267 (710)
.+ ++|+.|+++.|.+.+..|..++.+.+ |+.|++++|.+++.+|..+..
T Consensus 170 ~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~ 249 (844)
T 3j0a_A 170 PLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGF 249 (844)
T ss_dssp HHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSC
T ss_pred cccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccc
Confidence 87 88999999999998888877776665 888888888777665544322
Q ss_pred ---------------CCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCccc
Q 005177 268 ---------------LTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGT 332 (710)
Q Consensus 268 ---------------l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 332 (710)
.++|+.|++++|.+.+..|..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++++.
T Consensus 250 ~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 329 (844)
T 3j0a_A 250 HNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGEL 329 (844)
T ss_dssp SSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCC
T ss_pred cccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCcc
Confidence 25688888888888877777788888888888888888877777888888888888888888877
Q ss_pred CCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCc
Q 005177 333 VPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNG 379 (710)
Q Consensus 333 ~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g 379 (710)
.|..+..+++|++|++++|.+++..+..+..+++|+.|++++|.+++
T Consensus 330 ~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 376 (844)
T 3j0a_A 330 YSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT 376 (844)
T ss_dssp CSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC
T ss_pred CHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc
Confidence 77788888888888888888877767777778888888888887764
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=330.29 Aligned_cols=240 Identities=16% Similarity=0.133 Sum_probs=193.7
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEE-cCCCcEEEEEEeeccch---------hHHHHHHHHHHHhccCCCCceeEEEEE
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT---------RIKIVSEFITRIGTVRHKNLIRLLGFC 510 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~-~~~g~~vAvK~l~~~~~---------~~~~~~~e~~~l~~l~H~niv~l~g~~ 510 (710)
+..+.|. ..+.||+|+||.||+|. ..+|+.||||.++.... ..+.+.+|++++++++|||||++++++
T Consensus 21 ~~~~~y~--~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~ 98 (335)
T 3dls_A 21 EYSQKYS--TMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIF 98 (335)
T ss_dssp HHHHHEE--EEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEE
T ss_pred ccccceE--EEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 3455676 78899999999999998 47899999999986431 234577899999999999999999999
Q ss_pred EcCCceeEEEeecCCC-Chhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccC
Q 005177 511 YNRHQAYLLYDYLPNG-NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG 587 (710)
Q Consensus 511 ~~~~~~~lv~Ey~~~g-sL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG 587 (710)
.+++..++||||+.+| +|.+++.. .+++..+..|+.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 99 ~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 99 ENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp ECSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred eeCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecc
Confidence 9999999999999877 99999976 578999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccCCCC-cccccccCchhhhhccCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccC
Q 005177 588 FKYLTQLADGSF-PAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 665 (710)
Q Consensus 588 la~~~~~~~~~~-~~~~~~~~~~e~~~~~~~-~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (710)
+++......... ..++..|.+||......+ +.++|||||||++|||++|+.|+...... .......
T Consensus 176 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~~~---- 243 (335)
T 3dls_A 176 SAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET--------VEAAIHP---- 243 (335)
T ss_dssp TCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG--------TTTCCCC----
T ss_pred cceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH--------HhhccCC----
Confidence 998654322111 124455778888776665 78899999999999999999998642111 0111111
Q ss_pred CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 666 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 666 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+.. ....+.+++.+|++.||++|||+.|+++.
T Consensus 244 -~~~---~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 244 -PYL---VSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -SSC---CCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -Ccc---cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111 12356788899999999999999999875
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-38 Score=323.48 Aligned_cols=244 Identities=18% Similarity=0.235 Sum_probs=194.8
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEc---------
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN--------- 512 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--------- 512 (710)
...|. ..+.||+|+||.||+|.. .+|+.||||++.... +.+.+|++++++++||||+++++++..
T Consensus 10 ~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 10 GMDFK--EIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHEE--EEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred ccccc--eeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 34566 778999999999999986 489999999998543 356789999999999999999999864
Q ss_pred -------CCceeEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCce
Q 005177 513 -------RHQAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 581 (710)
Q Consensus 513 -------~~~~~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ 581 (710)
.+..++||||+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCE
Confidence 3458999999999999999953 478999999999999999999998 99999999999999999999
Q ss_pred EEcccCccccccccCCC-CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccc
Q 005177 582 HLAEFGFKYLTQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYN 660 (710)
Q Consensus 582 kl~DfGla~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~ 660 (710)
||+|||+++........ ...+...+.+||......++.++|||||||++|||+||+.|+...... .....+
T Consensus 162 kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~--------~~~~~~ 233 (284)
T 2a19_B 162 KIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKF--------FTDLRD 233 (284)
T ss_dssp EECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHH--------HHHHHT
T ss_pred EECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHH--------HHHhhc
Confidence 99999998765432211 122445577889888888899999999999999999998876422110 011111
Q ss_pred ccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCCC
Q 005177 661 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 708 (710)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~ 708 (710)
.. . +... ...+.+++.+|++.||++|||+.|+++.|+.++..
T Consensus 234 ~~-~--~~~~---~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 234 GI-I--SDIF---DKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275 (284)
T ss_dssp TC-C--CTTS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred cc-c--cccC---CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence 11 1 1111 13456888999999999999999999999988754
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-37 Score=353.52 Aligned_cols=240 Identities=15% Similarity=0.182 Sum_probs=189.9
Q ss_pred hhcCCCCCccEEEEc---CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 453 EAARPQSAAGCKAVL---PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~---~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
.||+|+||.||+|.. .++..||||+++... ...+.+.+|++++++++|||||+++|+|.+ +..++|||||++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 699999999999975 356789999998642 346789999999999999999999999976 56899999999999
Q ss_pred hhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCc---c
Q 005177 528 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFP---A 601 (710)
Q Consensus 528 L~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~---~ 601 (710)
|.+++.. .+++..+..|+.||++||+|||+. +|+||||||+|||++.++.+||+|||+++.......... .
T Consensus 422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 498 (613)
T 2ozo_A 422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 498 (613)
T ss_dssp HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccC
Confidence 9999964 478999999999999999999998 999999999999999999999999999987542221111 1
Q ss_pred --cccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHH
Q 005177 602 --KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 678 (710)
Q Consensus 602 --~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (710)
....|.+||+.....++.++|||||||++|||+| |+.|+.+..... ....+........+. .....+.
T Consensus 499 ~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~------~~~~i~~~~~~~~p~---~~~~~l~ 569 (613)
T 2ozo_A 499 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE------VMAFIEQGKRMECPP---ECPPELY 569 (613)
T ss_dssp ---CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH------HHHHHHTTCCCCCCT---TCCHHHH
T ss_pred CCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH------HHHHHHcCCCCCCCC---cCCHHHH
Confidence 1234678898888889999999999999999998 998886433211 011111111011111 1234577
Q ss_pred HHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 679 DVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 679 ~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
+++.+||+.||++||+|.++++.|+.+
T Consensus 570 ~li~~cl~~dP~~RPs~~~l~~~L~~~ 596 (613)
T 2ozo_A 570 ALMSDCWIYKWEDRPDFLTVEQRMRAC 596 (613)
T ss_dssp HHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 899999999999999999999999765
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-36 Score=342.09 Aligned_cols=320 Identities=23% Similarity=0.226 Sum_probs=218.3
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEE
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 155 (710)
.++.++++++.+.+..+..+.. +++|++|+|++|.+++..|..|.++++|++|+|++|+++ .+|.. .+++|++|+
T Consensus 53 ~L~~L~Ls~N~i~~~~~~~~~~--l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 127 (562)
T 3a79_B 53 RTKALSLSQNSISELRMPDISF--LSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLD 127 (562)
T ss_dssp TCCEEECCSSCCCCCCGGGTTT--CTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEE
T ss_pred CcCEEECCCCCccccChhhhcc--CCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEE
Confidence 4556666666666554445555 666666666666666666666666666666666666666 34444 566666666
Q ss_pred CCCCCCCc-CCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCC--CeEEecCCcC--CCCCcccccccc---------
Q 005177 156 AFSNSFSG-SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSL--EFLHLAGNLL--NDQIPAELGMLK--------- 221 (710)
Q Consensus 156 L~~N~l~~-~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L--~~L~L~~N~l--~~~~p~~l~~l~--------- 221 (710)
|++|.+++ .+|..|+++++|++|+|++|++++. .+..+++| +.|++++|.+ ++..|..+..+.
T Consensus 128 Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~ 204 (562)
T 3a79_B 128 LSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFH 204 (562)
T ss_dssp CCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEEC
T ss_pred CCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEec
Confidence 66666665 3456666666666666666666542 23334444 6666666666 555555554432
Q ss_pred ------------------------------------------------------------------------cccccccc
Q 005177 222 ------------------------------------------------------------------------TVTHMEIG 229 (710)
Q Consensus 222 ------------------------------------------------------------------------~L~~L~l~ 229 (710)
+|++|+++
T Consensus 205 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~ 284 (562)
T 3a79_B 205 PNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIY 284 (562)
T ss_dssp SSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEE
T ss_pred CccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEe
Confidence 55666666
Q ss_pred cccccccCCccc-----------------------------------------------------cCCCccchhcccccc
Q 005177 230 YNFYQGNIPWQL-----------------------------------------------------GNMSEVQYLDIAGAN 256 (710)
Q Consensus 230 ~n~~~g~~p~~l-----------------------------------------------------~~l~~L~~L~ls~n~ 256 (710)
+|.+.|.+|..+ +.+++|++|++++|+
T Consensus 285 ~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~ 364 (562)
T 3a79_B 285 NLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNV 364 (562)
T ss_dssp EEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSC
T ss_pred ccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCc
Confidence 666666666544 556777777777777
Q ss_pred CCccCchhccCCCCCcEEEccccccCCC--CCccccCCCCCCEEEccCCCCCCCCCc-cccCCCCCCEEEcccccCcccC
Q 005177 257 LSGSIPKELSNLTKLESLFLFRNQLAGQ--VPWEFSRVTTLKSLDLSDNRLSGPIPE-SFADLKNLRLLSLMYNEMSGTV 333 (710)
Q Consensus 257 l~g~~p~~l~~l~~L~~L~L~~n~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~g~~ 333 (710)
+++.+|..+..+++|+.|++++|++++. +|..+..+++|+.|++++|++++.+|. .+..+++|+.|++++|++++.+
T Consensus 365 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 444 (562)
T 3a79_B 365 FTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSV 444 (562)
T ss_dssp CCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGG
T ss_pred cccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcch
Confidence 7777777777777888888888777752 245567777788888888887774544 4677778888888888877766
Q ss_pred CcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCccc-ccCCCceeeEecccCCcccchhH
Q 005177 334 PESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPD-ICSGGVLFKLILFSNNFTGIVMF 407 (710)
Q Consensus 334 p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~-~~~~~~L~~l~l~~N~l~g~i~~ 407 (710)
|..+. ++|++|++++|+++ .+|..+..+++|+.|++++|+++ .+|+. +..++.|+.+++++|.+++..+.
T Consensus 445 ~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 445 FRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp GSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred hhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcch
Confidence 65554 67888888888887 67777778888888888888888 56766 77778888888888888877653
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-37 Score=319.33 Aligned_cols=243 Identities=19% Similarity=0.251 Sum_probs=178.8
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||.+..... ..+.+.+|++++++++||||+++++++.+.+..++
T Consensus 11 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 11 EDFK--VGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp GGEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred ccce--eeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 4455 778999999999999985 6899999999975432 24678899999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 519 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
||||+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 9999999999999975 468999999999999999999998 9999999999999999999999999998765422
Q ss_pred CCC--CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 596 DGS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 596 ~~~--~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
... ...+...+.+||......++.++|||||||++|||+||+.|+........ ........ ...+.. .
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------~~~~~~~~-~~~~~~---~ 235 (278)
T 3cok_A 166 HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT------LNKVVLAD-YEMPSF---L 235 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------CCSSC-CCCCTT---S
T ss_pred CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH------HHHHhhcc-cCCccc---c
Confidence 111 11234457788888777888999999999999999999999874332111 01111111 011111 1
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
...+.+++.+|++.||++|||++|+++.
T Consensus 236 ~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 236 SIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 2456789999999999999999999863
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-37 Score=328.58 Aligned_cols=244 Identities=21% Similarity=0.270 Sum_probs=191.7
Q ss_pred hhhhhcCCCCCccEEEEc--------CCCcEEEEEEeeccc--hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeE
Q 005177 450 ECEEAARPQSAAGCKAVL--------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~--------~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 518 (710)
..+.||+|+||.||+|.. .++..||||+++... ...+.+.+|+++++++ +||||++++++|.+++..++
T Consensus 39 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 118 (334)
T 2pvf_A 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 118 (334)
T ss_dssp EEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEE
T ss_pred EeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEE
Confidence 678899999999999985 357789999998643 2356788999999999 89999999999999999999
Q ss_pred EEeecCCCChhhhhhcC------------------CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc
Q 005177 519 LYDYLPNGNLSEKIRTK------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~~------------------~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~ 580 (710)
||||+++|+|.+++... .++..+..++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 119 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~ 195 (334)
T 2pvf_A 119 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNV 195 (334)
T ss_dssp EEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCC
T ss_pred EEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEEcCCCC
Confidence 99999999999999642 67889999999999999999998 9999999999999999999
Q ss_pred eEEcccCccccccccCC----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccc
Q 005177 581 PHLAEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLL 655 (710)
Q Consensus 581 ~kl~DfGla~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~ 655 (710)
+||+|||+++....... ........|.+||......++.++|||||||++|||+| |+.|+.+.... . ..
T Consensus 196 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~-----~~ 269 (334)
T 2pvf_A 196 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-E-----LF 269 (334)
T ss_dssp EEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-H-----HH
T ss_pred EEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH-H-----HH
Confidence 99999999876542211 11112334678888877788999999999999999999 88887643211 0 00
Q ss_pred cccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 656 GEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
..+........+. .....+.+++.+||+.||++|||+.|+++.|+++
T Consensus 270 ~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l 316 (334)
T 2pvf_A 270 KLLKEGHRMDKPA---NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316 (334)
T ss_dssp HHHHHTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHhcCCCCCCCc---cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 1111110001011 1224567889999999999999999999999876
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-37 Score=341.26 Aligned_cols=239 Identities=15% Similarity=0.201 Sum_probs=192.6
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|.. .+|+.||||.+..... ..+.+.+|++++++++|||||++++++.+.+..++||||++
T Consensus 20 l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ 99 (476)
T 2y94_A 20 LGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVS 99 (476)
T ss_dssp EEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCS
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCC
Confidence 678899999999999986 5899999999986432 24578899999999999999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-CCcc
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SFPA 601 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-~~~~ 601 (710)
+|+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....
T Consensus 100 gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~ 176 (476)
T 2y94_A 100 GGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC 176 (476)
T ss_dssp SEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBCCCC
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccccccccccC
Confidence 9999999975 568899999999999999999998 999999999999999999999999999987543211 1222
Q ss_pred cccccCchhhhhccCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHH
Q 005177 602 KIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 680 (710)
Q Consensus 602 ~~~~~~~~e~~~~~~~-~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 680 (710)
++..|.+||...+..+ +.++||||+||++|||++|+.||.+..... ....+.+.. ...+.. ....+.++
T Consensus 177 gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~------~~~~i~~~~-~~~p~~---~s~~~~~L 246 (476)
T 2y94_A 177 GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT------LFKKICDGI-FYTPQY---LNPSVISL 246 (476)
T ss_dssp SCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHH------HHHHHHTTC-CCCCTT---CCHHHHHH
T ss_pred CCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHH------HHHHHhcCC-cCCCcc---CCHHHHHH
Confidence 4556788888776654 688999999999999999999987433211 111111111 111111 12456789
Q ss_pred HhhcCCCCCCCCCCHHHHHHH
Q 005177 681 ALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 681 ~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+.+|++.||++|||++|++++
T Consensus 247 i~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 247 LKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp HHHHTCSSTTTSCCHHHHHTC
T ss_pred HHHHcCCCchhCcCHHHHHhC
Confidence 999999999999999999863
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-37 Score=328.62 Aligned_cols=259 Identities=18% Similarity=0.201 Sum_probs=194.8
Q ss_pred hhhhhcCCchhhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhc--cCCCCceeEEEEEEcCC---
Q 005177 440 NDVLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGT--VRHKNLIRLLGFCYNRH--- 514 (710)
Q Consensus 440 ~~~~~~~~~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~--l~H~niv~l~g~~~~~~--- 514 (710)
..+.+.|. ..+.||+|+||.||+|.. +|+.||||.+... ..+.+.+|++++.. ++||||+++++++...+
T Consensus 38 ~~~~~~y~--~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~ 112 (342)
T 1b6c_B 38 RTIARTIV--LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112 (342)
T ss_dssp HHHHHHCE--EEEEEEEETTEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred ccccccEE--EEeeecCCCCcEEEEEEE-cCccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence 33455677 788999999999999987 6999999999743 34556677787776 78999999999998876
Q ss_pred -ceeEEEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHh--------cCCCCCceecCCCCCCeEecCCCceEEc
Q 005177 515 -QAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLH--------HDCYPAIPHGDLKASNIVFDENMEPHLA 584 (710)
Q Consensus 515 -~~~lv~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH--------~~~~~~iiHrDlk~~NiLl~~~~~~kl~ 584 (710)
..++||||+++|+|.+++.. ..++.++..++.|+++||+||| +. +|+||||||+||+++.++.+||+
T Consensus 113 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~~~kL~ 189 (342)
T 1b6c_B 113 TQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIA 189 (342)
T ss_dssp CCEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTSCEEEC
T ss_pred ceeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCCCEEEE
Confidence 78999999999999999976 5789999999999999999999 55 99999999999999999999999
Q ss_pred ccCccccccccCC------CCcccccccCchhhhhcc------CCccccceeeHHHHHHHHHhC----------CCCCCC
Q 005177 585 EFGFKYLTQLADG------SFPAKIAWTESGEFYNAM------KEEMYMDVYGFGEIILEILTN----------GRLTNA 642 (710)
Q Consensus 585 DfGla~~~~~~~~------~~~~~~~~~~~~e~~~~~------~~~~~~DVySfGvvl~Elltg----------~~p~~~ 642 (710)
|||+++....... ....+...|.+||..... .++.++|||||||++|||+|| +.|+..
T Consensus 190 Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~ 269 (342)
T 1b6c_B 190 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 269 (342)
T ss_dssp CCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred ECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccc
Confidence 9999876543221 111234457788876654 234689999999999999999 555543
Q ss_pred CCCCCcccccccccccccccccC-CCc--chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 643 GSSLQNKPIDGLLGEMYNENEVG-SSS--SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
...... ........+....... .+. ...+....+.+++.+||+.||++|||+.||+++|+.+.+
T Consensus 270 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~ 336 (342)
T 1b6c_B 270 LVPSDP-SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 336 (342)
T ss_dssp TSCSSC-CHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCcCcc-cHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 211100 0000001111111000 011 112445678899999999999999999999999998854
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=323.54 Aligned_cols=250 Identities=19% Similarity=0.245 Sum_probs=185.8
Q ss_pred CCchhhhhhcCCCCCccEEEEcCCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 446 FNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 446 ~~~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
|. ..+.||+|+||.||+|.... .||||.++... ...+.+.+|++++++++||||+++++++ ..+..++||||
T Consensus 26 y~--~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~ 100 (289)
T 3og7_A 26 IT--VGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQW 100 (289)
T ss_dssp CE--EEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEEC
T ss_pred ee--eeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEe
Confidence 55 77899999999999998643 59999997542 2356789999999999999999999976 45678999999
Q ss_pred cCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC-
Q 005177 523 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 598 (710)
Q Consensus 523 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~- 598 (710)
+++|+|.+++.. ..++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (289)
T 3og7_A 101 CEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH 177 (289)
T ss_dssp CCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC------------
T ss_pred cCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccccccc
Confidence 999999999954 568899999999999999999998 9999999999999999999999999998754321111
Q ss_pred ---CcccccccCchhhhh---ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHH
Q 005177 599 ---FPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 672 (710)
Q Consensus 599 ---~~~~~~~~~~~e~~~---~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (710)
...+...|.+||... ...++.++|||||||++|||+||+.|+......... ..........+. . ......
T Consensus 178 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-~~~~~~~~~~~~-~--~~~~~~ 253 (289)
T 3og7_A 178 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-IEMVGRGSLSPD-L--SKVRSN 253 (289)
T ss_dssp ------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHH-HHHHHHTSCCCC-T--TSSCTT
T ss_pred cccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHH-HHHhcccccCcc-h--hhcccc
Confidence 112344577888765 556788999999999999999999998753321110 000000000111 0 000111
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 673 EIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
....+.+++.+|++.||++|||+.|+++.|+++.+
T Consensus 254 ~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 254 CPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 23467789999999999999999999999998865
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-37 Score=321.29 Aligned_cols=246 Identities=17% Similarity=0.216 Sum_probs=188.6
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
+.+.|. ..+.||+|+||.||++.. .+|..||||++.... ...+.+.+|++++++++||||+++++++.+.+..++
T Consensus 20 i~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 97 (285)
T 3is5_A 20 IDDLFI--FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYI 97 (285)
T ss_dssp HHHHEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhee--ecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEE
Confidence 344566 778999999999999985 678999999998643 235778999999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe---cCCCceEEcccCcc
Q 005177 519 LYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFK 589 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl---~~~~~~kl~DfGla 589 (710)
||||+++|+|.+++.. ..++..+..|+.|+++||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a 174 (285)
T 3is5_A 98 VMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174 (285)
T ss_dssp EECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCC
T ss_pred EEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecc
Confidence 9999999999998853 578999999999999999999998 99999999999999 45678999999999
Q ss_pred ccccccCC-CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCc
Q 005177 590 YLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 668 (710)
Q Consensus 590 ~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (710)
+....... ....+...+.+||... ..++.++|||||||++|||+||+.|+.+...... .... ....+. . ..
T Consensus 175 ~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~-~~~~---~~~~~~-~--~~ 246 (285)
T 3is5_A 175 ELFKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV-QQKA---TYKEPN-Y--AV 246 (285)
T ss_dssp CC----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHH---HHCCCC-C--CC
T ss_pred eecCCcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHH-Hhhh---ccCCcc-c--cc
Confidence 76543221 1122445577888765 4678899999999999999999999864321100 0000 000000 0 00
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 669 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 669 ~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
........+.+++.+|++.||++|||+.|+++
T Consensus 247 ~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 247 ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp --CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00011245678999999999999999999986
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-37 Score=337.03 Aligned_cols=241 Identities=15% Similarity=0.167 Sum_probs=183.5
Q ss_pred hhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHh-ccCCCCceeEEEEEEc----CCceeEEEeecCC
Q 005177 452 EEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIG-TVRHKNLIRLLGFCYN----RHQAYLLYDYLPN 525 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~-~l~H~niv~l~g~~~~----~~~~~lv~Ey~~~ 525 (710)
+.||+|+||.||++.. .+|+.||||+++.. ..+.+|++++. ..+|||||++++++.. ++..|+|||||++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~g 143 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 143 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCS
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcc----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCC
Confidence 6799999999999985 67999999999743 34667777764 4589999999999875 5678999999999
Q ss_pred CChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC---CCceEEcccCccccccccCC-
Q 005177 526 GNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLAEFGFKYLTQLADG- 597 (710)
Q Consensus 526 gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~---~~~~kl~DfGla~~~~~~~~- 597 (710)
|+|.+++.. .+++..+..|+.|+++||+|||+. +|+||||||+|||++. ++.+||+|||+++.......
T Consensus 144 g~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~ 220 (400)
T 1nxk_A 144 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL 220 (400)
T ss_dssp EEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----
T ss_pred CcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccccccCCCCcc
Confidence 999999975 368999999999999999999998 9999999999999997 78999999999986543221
Q ss_pred CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 598 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 598 ~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
....++.+|.+||+.....++.++|||||||++|||+||+.||........... ....+.........+.+......+
T Consensus 221 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~s~~~ 298 (400)
T 1nxk_A 221 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG--MKTRIRMGQYEFPNPEWSEVSEEV 298 (400)
T ss_dssp ------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCS--HHHHHHHTCCCCCTTTTTTSCHHH
T ss_pred ccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHH--HHHHHHcCcccCCCcccccCCHHH
Confidence 122245568888998888899999999999999999999999975432211000 000111110000011112233567
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 678 LDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+++.+||+.||++|||+.|++++
T Consensus 299 ~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 299 KMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp HHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHCCCChhHCcCHHHHhcC
Confidence 789999999999999999999875
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=324.73 Aligned_cols=249 Identities=10% Similarity=0.001 Sum_probs=194.8
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
..+.||+|+||.||+|.. .+|+.||||.+.... ..+.+.+|++++.++ +|+|++++++++.+++..++||||+ +|+
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 91 (298)
T 1csn_A 14 VGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPS 91 (298)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCC
Confidence 778899999999999984 789999999987543 345678899999998 7999999999999999999999999 899
Q ss_pred hhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc-----eEEcccCccccccccCC--
Q 005177 528 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME-----PHLAEFGFKYLTQLADG-- 597 (710)
Q Consensus 528 L~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~-----~kl~DfGla~~~~~~~~-- 597 (710)
|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++. +||+|||+++.......
T Consensus 92 L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 168 (298)
T 1csn_A 92 LEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQ 168 (298)
T ss_dssp HHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCC
T ss_pred HHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccc
Confidence 9999974 478999999999999999999998 9999999999999988776 99999999986543211
Q ss_pred -------CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCC-Ccc
Q 005177 598 -------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS-SSS 669 (710)
Q Consensus 598 -------~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 669 (710)
....++..|.+||......++.++|||||||++|||+||+.|+.......... ....+........ ...
T Consensus 169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 245 (298)
T 1csn_A 169 HIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ---KYERIGEKKQSTPLREL 245 (298)
T ss_dssp BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHH---HHHHHHHHHHHSCHHHH
T ss_pred cccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHH---HHHHHHhhccCccHHHH
Confidence 11123445778898888889999999999999999999999987533211100 0011100000000 000
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 670 LQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 670 ~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
.......+.+++.+||+.||++||+++++++.|+++.
T Consensus 246 ~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~ 282 (298)
T 1csn_A 246 CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVL 282 (298)
T ss_dssp TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHH
Confidence 0012346778999999999999999999999998763
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-37 Score=320.23 Aligned_cols=247 Identities=17% Similarity=0.175 Sum_probs=193.5
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
+.|. ..+.||+|+||.||+|.. .+|..||||.+.... ...+.+.+|++++++++||||+++++++.+++..++|
T Consensus 6 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 6 DNYD--VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhh--hhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 3455 778899999999999985 679999999997643 2356688999999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc---eEEcccCccccccc
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME---PHLAEFGFKYLTQL 594 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~---~kl~DfGla~~~~~ 594 (710)
|||+++|+|.+.+.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++.....
T Consensus 84 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 84 FDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 999999999988865 578999999999999999999998 9999999999999987655 99999999876543
Q ss_pred cCC-CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 595 ADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 595 ~~~-~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
... ....+...+.+||......++.++||||+||++|||++|+.|+........ ...+.........+.....
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 234 (284)
T 3kk8_A 161 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL------YAQIKAGAYDYPSPEWDTV 234 (284)
T ss_dssp SCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------HHHHHHTCCCCCTTTTTTS
T ss_pred CccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHH------HHHHHhccccCCchhhccc
Confidence 221 112244557788988888889999999999999999999999864332110 0011000000001111122
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
...+.+++.+|++.||++|||+.|++++
T Consensus 235 ~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 235 TPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred CHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 3457789999999999999999999874
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=335.46 Aligned_cols=243 Identities=12% Similarity=-0.012 Sum_probs=172.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHH---HHHhccCCCCceeEE-------EEEEcC-
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFI---TRIGTVRHKNLIRLL-------GFCYNR- 513 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~---~~l~~l~H~niv~l~-------g~~~~~- 513 (710)
..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+ +.|++ +|||||+++ +++..+
T Consensus 66 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~ 144 (371)
T 3q60_A 66 LVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQS 144 (371)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEETT
T ss_pred eeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecCC
Confidence 778999999999999985 689999999998743 2355677774 45555 799988755 455433
Q ss_pred ----------------CceeEEEeecCCCChhhhhhc---CCCHHHH------HHHHHHHHHHHHHHhcCCCCCceecCC
Q 005177 514 ----------------HQAYLLYDYLPNGNLSEKIRT---KRDWAAK------YKIVLGVARGLCFLHHDCYPAIPHGDL 568 (710)
Q Consensus 514 ----------------~~~~lv~Ey~~~gsL~~~l~~---~~~~~~~------~~i~~~ia~gL~yLH~~~~~~iiHrDl 568 (710)
...++|||||+ |+|.+++.. ...+..+ ..++.|+++||+|||+. +|+||||
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ivHrDi 220 (371)
T 3q60_A 145 QPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSK---GLVHGHF 220 (371)
T ss_dssp SCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEEETTC
T ss_pred CCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCccCcC
Confidence 23799999999 899999975 3455556 78889999999999998 9999999
Q ss_pred CCCCeEecCCCceEEcccCccccccccCCCCcccccccCchhhhhc--cCCccccceeeHHHHHHHHHhCCCCCCCCCCC
Q 005177 569 KASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSSL 646 (710)
Q Consensus 569 k~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~e~~~~--~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~ 646 (710)
||+|||++.++.+||+|||+++...........+ ..|.+||.... ..++.++|||||||++|||+||+.||......
T Consensus 221 kp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t-~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~ 299 (371)
T 3q60_A 221 TPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVP-VTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPG 299 (371)
T ss_dssp SGGGEEECTTSCEEECCGGGEEETTCEEEGGGSC-GGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTT
T ss_pred CHHHEEECCCCCEEEEecceeeecCCCccCccCC-cCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcc
Confidence 9999999999999999999998664322112223 55788898876 67899999999999999999999999854322
Q ss_pred Ccccccc-cccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 647 QNKPIDG-LLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 647 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
....... ......... .. .+........+.+++.+||+.||++|||+.|+++
T Consensus 300 ~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 300 IKGSWKRPSLRVPGTDS-LA-FGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp CTTCCCBCCTTSCCCCS-CC-CTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred cccchhhhhhhhccccc-cc-hhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1111110 000000101 00 0111122346778999999999999999999875
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-37 Score=319.14 Aligned_cols=245 Identities=19% Similarity=0.227 Sum_probs=188.3
Q ss_pred cCCchhhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcC-CceeEEEeec
Q 005177 445 SFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR-HQAYLLYDYL 523 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-~~~~lv~Ey~ 523 (710)
.|. ..+.||+|+||.||+|.. +|+.||||.++... ..+.+.+|++++++++||||+++++++.+. +..++||||+
T Consensus 22 ~y~--~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 97 (278)
T 1byg_A 22 ELK--LLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 97 (278)
T ss_dssp GEE--EEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred hce--EEeEEecCCCceEEEEEE-cCCEEEEEEecchh-HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence 355 778899999999999987 58899999998543 456788999999999999999999998654 4789999999
Q ss_pred CCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC
Q 005177 524 PNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 599 (710)
Q Consensus 524 ~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 599 (710)
++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 98 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 174 (278)
T 1byg_A 98 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 174 (278)
T ss_dssp TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred CCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccccccCC
Confidence 99999999975 268889999999999999999998 99999999999999999999999999987654322211
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 678 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (710)
.....+.+||......++.++||||||+++|||+| |+.|+...... . ....+........+. .....+.
T Consensus 175 -~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-~-----~~~~~~~~~~~~~~~---~~~~~l~ 244 (278)
T 1byg_A 175 -KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-D-----VVPRVEKGYKMDAPD---GCPPAVY 244 (278)
T ss_dssp --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG-G-----HHHHHTTTCCCCCCT---TCCHHHH
T ss_pred -CccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-H-----HHHHHhcCCCCCCcc---cCCHHHH
Confidence 22334778888888889999999999999999999 88887643211 1 011111110011011 1224567
Q ss_pred HHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 679 DVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 679 ~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
+++.+||+.||++|||+.|+++.|+.++
T Consensus 245 ~li~~~l~~~p~~Rps~~~l~~~L~~i~ 272 (278)
T 1byg_A 245 EVMKNCWHLDAAMRPSFLQLREQLEHIK 272 (278)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHhcCChhhCCCHHHHHHHHHHHH
Confidence 8889999999999999999999998875
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-36 Score=343.33 Aligned_cols=246 Identities=22% Similarity=0.231 Sum_probs=137.3
Q ss_pred CCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCC
Q 005177 159 NSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIP 238 (710)
Q Consensus 159 N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p 238 (710)
|.+++..+..|.++++|++|++++|+++ .+|..+.++++|++|++++|.+.+..|..+..+++|++|++++|.+.+.+|
T Consensus 264 n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 342 (606)
T 3t6q_A 264 HYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELG 342 (606)
T ss_dssp CCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCC
T ss_pred CccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccc
Confidence 3333333334556667777777777766 566666777777777777777666666666666666666666666665554
Q ss_pred cc-ccCCCccchhccccccCCccC--chhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCcc-cc
Q 005177 239 WQ-LGNMSEVQYLDIAGANLSGSI--PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPES-FA 314 (710)
Q Consensus 239 ~~-l~~l~~L~~L~ls~n~l~g~~--p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~ 314 (710)
.. ++++++|++|++++|++++.. |..+..+++|++|++++|.+.+..|..+..+++|+.|++++|++.+..|.. +.
T Consensus 343 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 422 (606)
T 3t6q_A 343 TGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQ 422 (606)
T ss_dssp SSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTT
T ss_pred hhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhh
Confidence 43 555666666666666555443 444555555555555555555555555555555555555555555443322 45
Q ss_pred CCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCC---CCCcccCCCCCCcEEECCCCcCCccCcccccCCCce
Q 005177 315 DLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSG---SLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVL 391 (710)
Q Consensus 315 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g---~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L 391 (710)
.+++|+.|++++|.+++..|..+..+++|++|++++|.+++ ..+..+..+++|+.|++++|.+++..|..+..++.|
T Consensus 423 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 502 (606)
T 3t6q_A 423 NLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMM 502 (606)
T ss_dssp TCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred CcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCC
Confidence 55555555555555555555555555555555555555543 122334445555555555555555445555555555
Q ss_pred eeEecccCCcccch
Q 005177 392 FKLILFSNNFTGIV 405 (710)
Q Consensus 392 ~~l~l~~N~l~g~i 405 (710)
+.|++++|++++..
T Consensus 503 ~~L~Ls~N~l~~~~ 516 (606)
T 3t6q_A 503 NHVDLSHNRLTSSS 516 (606)
T ss_dssp CEEECCSSCCCGGG
T ss_pred CEEECCCCccCcCC
Confidence 55555555555443
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-37 Score=319.69 Aligned_cols=247 Identities=16% Similarity=0.145 Sum_probs=193.3
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
+.+.|. ..+.||+|+||.||+|.. .++..||+|++.... ...+.+.+|++++++++||||+++++++.+++..++|
T Consensus 7 ~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (277)
T 3f3z_A 7 INQYYT--LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLV 84 (277)
T ss_dssp HHHHEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhEE--eeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEE
Confidence 344566 778999999999999985 567899999998642 3467789999999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe---cCCCceEEcccCccccccc
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFKYLTQL 594 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl---~~~~~~kl~DfGla~~~~~ 594 (710)
|||+++|+|.+++.. ..++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++....
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~ 161 (277)
T 3f3z_A 85 MELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 161 (277)
T ss_dssp EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred EeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence 999999999998865 568999999999999999999998 99999999999999 7889999999999876543
Q ss_pred cCC-CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 595 ADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 595 ~~~-~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
... ....+...+.+||.... .++.++|||||||++|||+||+.|+....... ....+...............
T Consensus 162 ~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 234 (277)
T 3f3z_A 162 GKMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSE------VMLKIREGTFTFPEKDWLNV 234 (277)
T ss_dssp TSCBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCCCCCCHHHHTTS
T ss_pred ccchhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhCCCCCCchhhhcC
Confidence 221 11224455778887654 48889999999999999999999986432111 01111111100000011122
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
...+.+++.+|++.||++|||+.|+++
T Consensus 235 ~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 235 SPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 356778999999999999999999975
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-36 Score=334.61 Aligned_cols=314 Identities=18% Similarity=0.145 Sum_probs=290.0
Q ss_pred eeeeeeCCCC---------CcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCC
Q 005177 65 WSGVKCNKNN---------TIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRN 135 (710)
Q Consensus 65 w~gv~C~~~~---------~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 135 (710)
|..|.|.... ..+..++++++.+.+..+..+.. +++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 13 ~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~--l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 13 DRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFAS--FPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTT--CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccC--CCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 5678887521 25678999999999887777877 999999999999999988999999999999999999
Q ss_pred CCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcc
Q 005177 136 NFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPA 215 (710)
Q Consensus 136 ~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 215 (710)
++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|+.|++++|.+++..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 99987777889999999999999999999999999999999999999999998899999999999999999999987778
Q ss_pred cccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCC
Q 005177 216 ELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTL 295 (710)
Q Consensus 216 ~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 295 (710)
.+..+++|+.|++++|.+.+..+..+..+++|+.|++++|.+.+.+|.......+|+.|++++|++++..+..+..+++|
T Consensus 171 ~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L 250 (477)
T 2id5_A 171 ALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYL 250 (477)
T ss_dssp HHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTC
T ss_pred HhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCcccc
Confidence 89999999999999999999888899999999999999999988888887777899999999999996555678999999
Q ss_pred CEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCC
Q 005177 296 KSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTN 375 (710)
Q Consensus 296 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N 375 (710)
+.|+|++|.+++..+..|..+++|+.|+|++|++++..|..+..+++|+.|+|++|.+++..+..+..+++|+.|++++|
T Consensus 251 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 330 (477)
T 2id5_A 251 RFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSN 330 (477)
T ss_dssp CEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSS
T ss_pred CeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCC
Confidence 99999999999888889999999999999999999999999999999999999999999877778899999999999999
Q ss_pred cCCcc
Q 005177 376 NFNGS 380 (710)
Q Consensus 376 ~l~g~ 380 (710)
.+...
T Consensus 331 ~l~c~ 335 (477)
T 2id5_A 331 PLACD 335 (477)
T ss_dssp CEECS
T ss_pred CccCc
Confidence 99864
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-36 Score=340.35 Aligned_cols=312 Identities=22% Similarity=0.257 Sum_probs=244.3
Q ss_pred EEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECC
Q 005177 78 VGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAF 157 (710)
Q Consensus 78 ~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~ 157 (710)
..++++++++++ +|..+ .+.|++|+|++|.+++..|..|.++++|++|+|++|++++..|+.|.++++|++|||+
T Consensus 34 ~~l~ls~~~L~~-ip~~~----~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 108 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDL----PPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVS 108 (562)
T ss_dssp CEEECTTSCCCS-CCTTS----CTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECT
T ss_pred cEEEcCCCCCcc-CCCCC----CCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECC
Confidence 567899999986 77655 3689999999999998888899999999999999999999999999999999999999
Q ss_pred CCCCCcCCchhccCCCCCCEEEccCCCCCC-CCCcccCCCCCCCeEEecCCcCCCCCcccccccccc--cccccccccc-
Q 005177 158 SNSFSGSVPAEISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV--THMEIGYNFY- 233 (710)
Q Consensus 158 ~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~l~~n~~- 233 (710)
+|.++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|.+++. .+..+++| +.|+++.|.+
T Consensus 109 ~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~ 182 (562)
T 3a79_B 109 HNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYH 182 (562)
T ss_dssp TSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCC
T ss_pred CCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccc
Confidence 99999 57776 89999999999999987 4578999999999999999999864 44455555 9999999988
Q ss_pred -cccCCccccCCC-------------------------------------------------------------------
Q 005177 234 -QGNIPWQLGNMS------------------------------------------------------------------- 245 (710)
Q Consensus 234 -~g~~p~~l~~l~------------------------------------------------------------------- 245 (710)
++..|..+..+.
T Consensus 183 ~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~ 262 (562)
T 3a79_B 183 IKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETT 262 (562)
T ss_dssp CCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEEC
T ss_pred ccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCc
Confidence 776666655433
Q ss_pred --------------ccchhccccccCCccCchhc----------------------------------------------
Q 005177 246 --------------EVQYLDIAGANLSGSIPKEL---------------------------------------------- 265 (710)
Q Consensus 246 --------------~L~~L~ls~n~l~g~~p~~l---------------------------------------------- 265 (710)
+|++|++++|+++|.+|..+
T Consensus 263 ~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~ 342 (562)
T 3a79_B 263 WKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTP 342 (562)
T ss_dssp HHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSC
T ss_pred HHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCC
Confidence 67777788888887777655
Q ss_pred -------cCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCC--CCCccccCCCCCCEEEcccccCcccCCc-
Q 005177 266 -------SNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG--PIPESFADLKNLRLLSLMYNEMSGTVPE- 335 (710)
Q Consensus 266 -------~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~- 335 (710)
..+++|++|++++|.+++.+|..+..+++|+.|++++|++++ .+|..+..+++|+.|++++|++++.+|.
T Consensus 343 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 422 (562)
T 3a79_B 343 FIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDR 422 (562)
T ss_dssp CCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSC
T ss_pred cccccCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChh
Confidence 456677777777777777667677777777777777777765 2345567777777777777777764444
Q ss_pred ccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecccCCccc
Q 005177 336 SLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTG 403 (710)
Q Consensus 336 ~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~l~g 403 (710)
.+..+++|++|++++|.+++.+|..+. ++|+.|++++|+++ .+|+.+..++.|+.|++++|+++.
T Consensus 423 ~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~ 487 (562)
T 3a79_B 423 TCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS 487 (562)
T ss_dssp CCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC
T ss_pred hhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC
Confidence 366667777777777777766665543 56777777777776 577777677777777777777774
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-37 Score=322.48 Aligned_cols=245 Identities=17% Similarity=0.200 Sum_probs=191.1
Q ss_pred hhhhhcCCCCCccEEEEc-C---CCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCce-eEEEee
Q 005177 450 ECEEAARPQSAAGCKAVL-P---TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA-YLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~---~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~-~lv~Ey 522 (710)
..+.||+|+||.||+|.. . ++..||||.+.... ...+.+.+|++++++++|||||++++++.+.+.. ++||||
T Consensus 25 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~ 104 (298)
T 3pls_A 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPY 104 (298)
T ss_dssp EEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECC
T ss_pred cCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEec
Confidence 457899999999999984 2 23479999997533 2356788999999999999999999999876655 999999
Q ss_pred cCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC---
Q 005177 523 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--- 596 (710)
Q Consensus 523 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~--- 596 (710)
+.+|+|.+++.. ..++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 105 ~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 181 (298)
T 3pls_A 105 MCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYS 181 (298)
T ss_dssp CTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGC
T ss_pred ccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccc
Confidence 999999999975 467889999999999999999999 99999999999999999999999999987542211
Q ss_pred ---CCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 597 ---GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 597 ---~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
.........+.+||......++.++|||||||++|||+||+.|+.......... ..+........+.. .
T Consensus 182 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~---~ 253 (298)
T 3pls_A 182 VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLT-----HFLAQGRRLPQPEY---C 253 (298)
T ss_dssp SCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHH-----HHHHTTCCCCCCTT---C
T ss_pred cccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHH-----HHhhcCCCCCCCcc---c
Confidence 111123345778888888888999999999999999999887766443221110 01111110111111 1
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
...+.+++.+|++.||++|||++|+++.|+++
T Consensus 254 ~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~ 285 (298)
T 3pls_A 254 PDSLYQVMQQCWEADPAVRPTFRVLVGEVEQI 285 (298)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 24577889999999999999999999999876
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=328.79 Aligned_cols=243 Identities=14% Similarity=0.123 Sum_probs=185.3
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc----CCCcEEEEEEeeccc-----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCC
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL----PTGITVSVKKIEWGA-----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH 514 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~----~~g~~vAvK~l~~~~-----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~ 514 (710)
+.|. ..+.||+|+||.||++.. .+|+.||||.++... .....+.+|++++++++|||||++++++.+++
T Consensus 17 ~~y~--~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 94 (327)
T 3a62_A 17 ECFE--LLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG 94 (327)
T ss_dssp GGEE--EEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS
T ss_pred HHeE--EEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC
Confidence 3455 778999999999999985 578999999998642 23456788999999999999999999999999
Q ss_pred ceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccc
Q 005177 515 QAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 592 (710)
Q Consensus 515 ~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~ 592 (710)
..|+||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 95 KLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp CEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 99999999999999999965 568888999999999999999998 9999999999999999999999999998754
Q ss_pred cccCC--CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcch
Q 005177 593 QLADG--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 670 (710)
Q Consensus 593 ~~~~~--~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (710)
..... ....++..|.+||......++.++|||||||++|||++|+.||.+..... ....+.... ...+..
T Consensus 172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~------~~~~i~~~~-~~~p~~- 243 (327)
T 3a62_A 172 IHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK------TIDKILKCK-LNLPPY- 243 (327)
T ss_dssp -------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHTC-CCCCTT-
T ss_pred ccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhCC-CCCCCC-
Confidence 32211 11224455788898888888999999999999999999999987433211 111111111 111111
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 005177 671 QDEIKLVLDVALLCTRSTPSDRP-----SMEEALKL 701 (710)
Q Consensus 671 ~~~~~~~~~l~~~Cl~~~p~~RP-----s~~evl~~ 701 (710)
....+.+++.+|++.||++|| ++.|++++
T Consensus 244 --~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 244 --LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp --SCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred --CCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 124567889999999999999 77788763
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-36 Score=342.11 Aligned_cols=328 Identities=20% Similarity=0.218 Sum_probs=210.0
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEE
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 155 (710)
.+..++++++.+++..+..+.. +++|++|||++|.+++..|..|.++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~--l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFS--FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTT--CSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred cccEEEccCCccCccChhHhhC--CCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 4677888888887766666666 78888888888888776677788888888888888888877777788888888888
Q ss_pred CCCCCCCcCCchhccCCCCCCEEEccCCCCCC-CCCcccCCCCCCCeEEecCCcCCCCCccccccccc------------
Q 005177 156 AFSNSFSGSVPAEISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKT------------ 222 (710)
Q Consensus 156 L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~------------ 222 (710)
+++|.+++..+..++++++|++|+|++|.+++ .+|..|+++++|++|++++|.+++..|..++.+++
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~ 186 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCC
Confidence 88888776555567788888888888887776 46777777888888877777765544433333222
Q ss_pred --------------------------------------------------------------------------------
Q 005177 223 -------------------------------------------------------------------------------- 222 (710)
Q Consensus 223 -------------------------------------------------------------------------------- 222 (710)
T Consensus 187 n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 266 (570)
T 2z63_A 187 NPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 266 (570)
T ss_dssp CCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEE
T ss_pred CCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhc
Confidence
Q ss_pred -----------------ccccccccccccccCCccc------------------------------------------cC
Q 005177 223 -----------------VTHMEIGYNFYQGNIPWQL------------------------------------------GN 243 (710)
Q Consensus 223 -----------------L~~L~l~~n~~~g~~p~~l------------------------------------------~~ 243 (710)
|+.|++++|.+. .+|..+ ..
T Consensus 267 ~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~ 345 (570)
T 2z63_A 267 LDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVD 345 (570)
T ss_dssp TTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCB
T ss_pred chhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCcccccccccc
Confidence 222222222222 111110 23
Q ss_pred CCccchhccccccCCccC--chh-----------------------ccCCCCCcEEEccccccCCCCC-ccccCCCCCCE
Q 005177 244 MSEVQYLDIAGANLSGSI--PKE-----------------------LSNLTKLESLFLFRNQLAGQVP-WEFSRVTTLKS 297 (710)
Q Consensus 244 l~~L~~L~ls~n~l~g~~--p~~-----------------------l~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~ 297 (710)
+++|++|++++|++++.. |.. +..+++|+.|++++|.+.+..| ..+.++++|++
T Consensus 346 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 425 (570)
T 2z63_A 346 LPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 425 (570)
T ss_dssp CTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCE
T ss_pred CCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCCE
Confidence 455556666666555332 334 4444555555555555554443 34555666666
Q ss_pred EEccCCCCCCCCCccccCCCCCCEEEcccccCc-ccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCc
Q 005177 298 LDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS-GTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNN 376 (710)
Q Consensus 298 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~ 376 (710)
|++++|.+.+..|..+..+++|+.|++++|.++ +.+|..+..+++|++|++++|.+++..|..+..+++|+.|++++|+
T Consensus 426 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 505 (570)
T 2z63_A 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQ 505 (570)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCc
Confidence 666666666666666666666666666666665 4566666666666666666666666656666666666666666666
Q ss_pred CCccCcccccCCCceeeEecccCCcccchh
Q 005177 377 FNGSIPPDICSGGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 377 l~g~ip~~~~~~~~L~~l~l~~N~l~g~i~ 406 (710)
+++..|..+..+++|+.+++++|.+++..|
T Consensus 506 l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 506 LKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 666555556666666666666666666554
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-37 Score=333.08 Aligned_cols=250 Identities=12% Similarity=0.070 Sum_probs=189.1
Q ss_pred cCCchhhhhhcCCCCCccEEEEcCC------CcEEEEEEeeccchh------------HHHHHHHHHHHhccCCCCceeE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVLPT------GITVSVKKIEWGATR------------IKIVSEFITRIGTVRHKNLIRL 506 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~~~------g~~vAvK~l~~~~~~------------~~~~~~e~~~l~~l~H~niv~l 506 (710)
.|. ..+.||+|+||.||+|.... ++.||||.+...... ...+.+|+..+.+++|||||++
T Consensus 36 ~y~--~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 36 AWK--VGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp EEE--EEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred eEE--EEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 465 78899999999999998643 578999998764321 1223445667788899999999
Q ss_pred EEEEEcC----CceeEEEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec--C
Q 005177 507 LGFCYNR----HQAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD--E 577 (710)
Q Consensus 507 ~g~~~~~----~~~~lv~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~--~ 577 (710)
++++... ...++||||+ +|+|.+++.. .+++..+..|+.|+++||+|||+. +|+||||||+|||++ .
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESSC
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecCC
Confidence 9999775 4589999999 9999999964 478999999999999999999999 999999999999999 8
Q ss_pred CCceEEcccCccccccccCCC---------CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc
Q 005177 578 NMEPHLAEFGFKYLTQLADGS---------FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN 648 (710)
Q Consensus 578 ~~~~kl~DfGla~~~~~~~~~---------~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~ 648 (710)
++.+||+|||+++........ ...++..|.+||...+..++.++|||||||++|||+||+.||.+......
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~ 269 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPK 269 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHH
Confidence 899999999999765322111 11144457788988888899999999999999999999999974322211
Q ss_pred cccc------ccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 649 KPID------GLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 649 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
.... .......++. .. .. .....+.+++..||+.+|++||++.++++.|+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~-~~-~~---~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~ 327 (364)
T 3op5_A 270 YVRDSKIRYRENIASLMDKC-FP-AA---NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQG 327 (364)
T ss_dssp HHHHHHHHHHHCHHHHHHHH-SC-TT---CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhHHHHHHHh-cc-cc---cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 1100 0011111111 00 00 1124567888999999999999999999998765
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-37 Score=331.50 Aligned_cols=192 Identities=16% Similarity=0.186 Sum_probs=167.0
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccC-----CCCceeEEEEEEcCCcee
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR-----HKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~-----H~niv~l~g~~~~~~~~~ 517 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||+++......+.+..|++++++++ |||||++++++...+..+
T Consensus 35 ~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~ 112 (360)
T 3llt_A 35 NAFL--VIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMC 112 (360)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEE
T ss_pred CEEE--EEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeE
Confidence 4455 788999999999999986 67899999999866556677788999998886 999999999999999999
Q ss_pred EEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC----------------
Q 005177 518 LLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---------------- 577 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~---------------- 577 (710)
+||||+ +|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.
T Consensus 113 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~ 188 (360)
T 3llt_A 113 LIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVRRVTDG 188 (360)
T ss_dssp EEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEEECTTTC
T ss_pred EEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccchhccccc
Confidence 999999 8999999975 368899999999999999999998 9999999999999985
Q ss_pred ---------CCceEEcccCccccccccCCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCC
Q 005177 578 ---------NMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNA 642 (710)
Q Consensus 578 ---------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~ 642 (710)
++.+||+|||+++......... .++..|.+||......++.++|||||||++|||+||+.||..
T Consensus 189 ~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 261 (360)
T 3llt_A 189 KKIQIYRTKSTGIKLIDFGCATFKSDYHGSI-INTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRT 261 (360)
T ss_dssp CEEEEEEESCCCEEECCCTTCEETTSCCCSC-CSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccccCCCCEEEEeccCceecCCCCcCc-cCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCC
Confidence 7899999999998654332222 234457888988888899999999999999999999999864
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-37 Score=354.74 Aligned_cols=241 Identities=16% Similarity=0.197 Sum_probs=190.0
Q ss_pred hhhcCCCCCccEEEEc---CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 452 EEAARPQSAAGCKAVL---PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~---~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
+.||+|+||.||+|.. .+++.||||+++.... ..+.+.+|++++++++|||||+++++|.+ +..++|||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 4799999999999964 4578999999986432 35789999999999999999999999965 568999999999
Q ss_pred CChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC----
Q 005177 526 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---- 599 (710)
Q Consensus 526 gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~---- 599 (710)
|+|.+++.. ..++..+..|+.||++||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 454 g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 530 (635)
T 4fl3_A 454 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 530 (635)
T ss_dssp EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---------
T ss_pred CCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccccc
Confidence 999999975 578999999999999999999998 99999999999999999999999999998654322111
Q ss_pred -cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 600 -PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 600 -~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
......|.+||+.....++.++|||||||++|||+| |+.|+.+..... ....+........+. .....+
T Consensus 531 ~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~------~~~~i~~~~~~~~p~---~~~~~l 601 (635)
T 4fl3_A 531 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE------VTAMLEKGERMGCPA---GCPREM 601 (635)
T ss_dssp ----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH------HHHHHHTTCCCCCCT---TCCHHH
T ss_pred CCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCCCCCC---CCCHHH
Confidence 112233678898888889999999999999999999 999886433211 001111111011111 123457
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 678 LDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
.+++.+||+.||++||++.++++.|+++
T Consensus 602 ~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 602 YDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 7899999999999999999999999865
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-38 Score=331.54 Aligned_cols=248 Identities=16% Similarity=0.146 Sum_probs=187.3
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCc-
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ- 515 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~- 515 (710)
+.+.|. ..+.||+|+||.||+|.. .+|+.||||.++.... ..+.+.+|++++.+++|||||++++++...+.
T Consensus 10 ~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 87 (311)
T 3ork_A 10 LSDRYE--LGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPA 87 (311)
T ss_dssp ETTTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETT
T ss_pred ecCcEE--EEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCC
Confidence 344565 778999999999999985 7899999999986422 24568899999999999999999999887554
Q ss_pred ---eeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccc
Q 005177 516 ---AYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 590 (710)
Q Consensus 516 ---~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~ 590 (710)
.++||||+++|+|.++++. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 88 ~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~ 164 (311)
T 3ork_A 88 GPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIAR 164 (311)
T ss_dssp EEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC-
T ss_pred CcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcc
Confidence 3999999999999999965 578999999999999999999998 99999999999999999999999999997
Q ss_pred cccccCCC-----CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccC
Q 005177 591 LTQLADGS-----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 665 (710)
Q Consensus 591 ~~~~~~~~-----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (710)
........ ...+...|.+||......++.++|||||||++|||+||+.||.+...... ..+........
T Consensus 165 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~------~~~~~~~~~~~ 238 (311)
T 3ork_A 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV------AYQHVREDPIP 238 (311)
T ss_dssp -----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH------HHHHHHCCCCC
T ss_pred cccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH------HHHHhcCCCCC
Confidence 65432111 11134557788988888899999999999999999999999864332110 00111111000
Q ss_pred CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 666 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 666 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
...........+.+++.+||+.||++||++.+++.
T Consensus 239 ~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~ 273 (311)
T 3ork_A 239 PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMR 273 (311)
T ss_dssp HHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred cccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHH
Confidence 00000112345778999999999999997666554
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=344.27 Aligned_cols=243 Identities=13% Similarity=0.074 Sum_probs=186.4
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||.++... .....+.+|++++++++|||||+++++|.+.+..++
T Consensus 148 ~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 148 NEFE--YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp GGEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred HHcE--EeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 3455 778999999999999985 679999999998532 234567789999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhc-CCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 519 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHH-DCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
|||||++|+|.+++.. .+++.....++.|+++||+|||+ . +|+||||||+|||++.++.+||+|||+++.....
T Consensus 226 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 226 VMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp EECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred EEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 9999999999999865 56899999999999999999998 7 9999999999999999999999999999753222
Q ss_pred CC--CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 596 DG--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 596 ~~--~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
.. ....++..|.+||+.....++.++|||||||++|||+||+.||....... ....+.... ...+.. .
T Consensus 303 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~------~~~~i~~~~-~~~p~~---~ 372 (446)
T 4ejn_A 303 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK------LFELILMEE-IRFPRT---L 372 (446)
T ss_dssp ----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-CCCCTT---S
T ss_pred CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH------HHHHHHhCC-CCCCcc---C
Confidence 11 12224556888899888889999999999999999999999986433211 111111111 111111 1
Q ss_pred HHHHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRP-----SMEEALKL 701 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RP-----s~~evl~~ 701 (710)
...+.+++.+||+.||++|| +++|++++
T Consensus 373 ~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 373 GPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 24567899999999999999 99999863
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=330.91 Aligned_cols=249 Identities=17% Similarity=0.216 Sum_probs=190.3
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEE
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv 519 (710)
+.+.|. ..+.||+|+||.||++.. .+|+.||||.++.... ...+|++++.++ +|||||++++++.+++..|+|
T Consensus 20 ~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv 94 (342)
T 2qr7_A 20 FTDGYE--VKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVV 94 (342)
T ss_dssp HHHHEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEE
T ss_pred ccccEE--EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEE
Confidence 345566 778999999999999986 5799999999986432 345678888877 799999999999999999999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC----CceEEcccCcccccc
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN----MEPHLAEFGFKYLTQ 593 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~----~~~kl~DfGla~~~~ 593 (710)
|||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||++.++ +.+||+|||+++...
T Consensus 95 ~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 95 TELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp ECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 999999999999865 468889999999999999999999 99999999999998543 359999999998654
Q ss_pred ccCCC--CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchH
Q 005177 594 LADGS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 671 (710)
Q Consensus 594 ~~~~~--~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (710)
..... ...++..|.+||......++.++||||+||++|||++|+.||....... .......+...........+.
T Consensus 172 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~---~~~~~~~i~~~~~~~~~~~~~ 248 (342)
T 2qr7_A 172 AENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT---PEEILARIGSGKFSLSGGYWN 248 (342)
T ss_dssp CTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC---HHHHHHHHHHCCCCCCSTTTT
T ss_pred CCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC---HHHHHHHHccCCcccCccccc
Confidence 32221 1224556788898877778889999999999999999999987432111 001111111111011111112
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 672 DEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 672 ~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.....+.+++.+|++.||++|||+.|++++
T Consensus 249 ~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 249 SVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred cCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 233567789999999999999999998763
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-37 Score=338.63 Aligned_cols=250 Identities=15% Similarity=0.122 Sum_probs=187.2
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---------hHHHHHHHHHHHhccCCCCceeEEEEE
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---------RIKIVSEFITRIGTVRHKNLIRLLGFC 510 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---------~~~~~~~e~~~l~~l~H~niv~l~g~~ 510 (710)
.+.+.|. ..+.||+|+||.||+|.. .+|+.||||.+..... ....+.+|++++++++|||||++++++
T Consensus 132 ~~~~~y~--~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~ 209 (419)
T 3i6u_A 132 ALRDEYI--MSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF 209 (419)
T ss_dssp HHHTTEE--EEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEE
T ss_pred hhhccEE--EEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 3445566 778999999999999985 6789999999986321 123478899999999999999999998
Q ss_pred EcCCceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC---CceEEcc
Q 005177 511 YNRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN---MEPHLAE 585 (710)
Q Consensus 511 ~~~~~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~---~~~kl~D 585 (710)
.. +..++||||+++|+|.+++.. .+++.....++.|+++||+|||+. +|+||||||+|||++.+ +.+||+|
T Consensus 210 ~~-~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~D 285 (419)
T 3i6u_A 210 DA-EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 285 (419)
T ss_dssp ES-SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECC
T ss_pred ec-CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEee
Confidence 64 557999999999999999865 568999999999999999999998 99999999999999754 4599999
Q ss_pred cCccccccccCCC-CcccccccCchhhhh---ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccc
Q 005177 586 FGFKYLTQLADGS-FPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNE 661 (710)
Q Consensus 586 fGla~~~~~~~~~-~~~~~~~~~~~e~~~---~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 661 (710)
||+++........ ...++..|.+||+.. ...++.++|||||||++|||+||+.||........ . ...+...
T Consensus 286 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~-~----~~~i~~~ 360 (419)
T 3i6u_A 286 FGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-L----KDQITSG 360 (419)
T ss_dssp SSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC-H----HHHHHTT
T ss_pred cccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH-H----HHHHhcC
Confidence 9999876432211 122445577888764 35678899999999999999999999874332111 0 0111111
Q ss_pred cccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 662 NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.....+..+......+.+++.+|++.||++|||+.|++++
T Consensus 361 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 361 KYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 1000011111234567899999999999999999999874
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-37 Score=323.38 Aligned_cols=249 Identities=19% Similarity=0.219 Sum_probs=188.2
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch------hHHHHHHHHHHHhcc---CCCCceeEEEEEEcC
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT------RIKIVSEFITRIGTV---RHKNLIRLLGFCYNR 513 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~------~~~~~~~e~~~l~~l---~H~niv~l~g~~~~~ 513 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||++..... ....+.+|+++++++ +|||||+++++|...
T Consensus 9 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 9 SRYE--PVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp -CCE--EEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cceE--EEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 4455 788999999999999995 6799999999974321 134566777776665 499999999999875
Q ss_pred C-----ceeEEEeecCCCChhhhhhcC----CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEc
Q 005177 514 H-----QAYLLYDYLPNGNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 584 (710)
Q Consensus 514 ~-----~~~lv~Ey~~~gsL~~~l~~~----~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~ 584 (710)
+ ..++||||+. |+|.+++... +++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEe
Confidence 5 4799999997 6999999762 68999999999999999999999 99999999999999999999999
Q ss_pred ccCccccccccCCCC-cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCC---------------c
Q 005177 585 EFGFKYLTQLADGSF-PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------N 648 (710)
Q Consensus 585 DfGla~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~---------------~ 648 (710)
|||+++......... ..++..|.+||......++.++|||||||++|||+||+.||.+..... .
T Consensus 163 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 242 (308)
T 3g33_A 163 DFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 242 (308)
T ss_dssp SCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred eCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 999998654322221 124556788898888889999999999999999999999986432211 0
Q ss_pred cccccccc-ccccccccCCCcch----HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 649 KPIDGLLG-EMYNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 649 ~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
|....... ....+. ..... .+....+.+++.+|++.||++|||+.|++++
T Consensus 243 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 243 WPRDVSLPRGAFPPR---GPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp SCSSCSSCGGGSCCC---CCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccchhhccccccCCC---CCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 10000000 000000 00000 1123467789999999999999999999864
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-37 Score=318.02 Aligned_cols=241 Identities=15% Similarity=0.172 Sum_probs=190.8
Q ss_pred hhhcCCCCCccEEEEc---CCCcEEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 452 EEAARPQSAAGCKAVL---PTGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~---~~g~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..||+|+||.||+|.. .++..||||.++.. ....+.+.+|++++++++||||+++++++ ..+..++||||+++|
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 94 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGG 94 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCC
Confidence 3899999999999985 36889999999864 23467789999999999999999999999 456789999999999
Q ss_pred Chhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-----C
Q 005177 527 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-----S 598 (710)
Q Consensus 527 sL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-----~ 598 (710)
+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... .
T Consensus 95 ~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 171 (287)
T 1u59_A 95 PLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS 171 (287)
T ss_dssp EHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCC
T ss_pred CHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccc
Confidence 99999954 478999999999999999999998 999999999999999999999999999876532211 1
Q ss_pred CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 599 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 599 ~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
...+...+.+||......++.++|||||||++|||+| |+.|+....... ....+........+. .....+
T Consensus 172 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~~i~~~~~~~~~~---~~~~~l 242 (287)
T 1u59_A 172 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE------VMAFIEQGKRMECPP---ECPPEL 242 (287)
T ss_dssp SSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH------HHHHHHTTCCCCCCT---TCCHHH
T ss_pred cccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH------HHHHHhcCCcCCCCC---CcCHHH
Confidence 1112344778888887788999999999999999999 998886433211 000111110011111 123457
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 678 LDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
.+++.+||+.||++||++.|+++.|+.+
T Consensus 243 ~~li~~~l~~~p~~Rps~~~l~~~l~~~ 270 (287)
T 1u59_A 243 YALMSDCWIYKWEDRPDFLTVEQRMRAC 270 (287)
T ss_dssp HHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 7889999999999999999999999876
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-37 Score=323.56 Aligned_cols=250 Identities=17% Similarity=0.219 Sum_probs=195.8
Q ss_pred hcCCchhhhhhcCCCCCccEEEEcC------CCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCc
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVLP------TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ 515 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~~------~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 515 (710)
+.|. ..+.||+|+||.||+|... +++.||||.+.... .....+.+|++++++++||||+++++++.+++.
T Consensus 25 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 102 (322)
T 1p4o_A 25 EKIT--MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 102 (322)
T ss_dssp GGEE--EEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSS
T ss_pred hhee--eeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCc
Confidence 3455 7789999999999999753 47899999997543 235568899999999999999999999999999
Q ss_pred eeEEEeecCCCChhhhhhc------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEE
Q 005177 516 AYLLYDYLPNGNLSEKIRT------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 583 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl 583 (710)
.++||||+++|+|.+++.. ..++..+.+++.|+++||+|||+. +|+||||||+||+++.++.+||
T Consensus 103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~kl 179 (322)
T 1p4o_A 103 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 179 (322)
T ss_dssp CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEE
T ss_pred cEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeEEE
Confidence 9999999999999999864 347889999999999999999999 9999999999999999999999
Q ss_pred cccCccccccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccc
Q 005177 584 AEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEM 658 (710)
Q Consensus 584 ~DfGla~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~ 658 (710)
+|||+++........ ...+...+.+||......++.++|||||||++|||+| |+.|+...... . ....+
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-~-----~~~~~ 253 (322)
T 1p4o_A 180 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-Q-----VLRFV 253 (322)
T ss_dssp CCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH-H-----HHHHH
T ss_pred CcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH-H-----HHHHH
Confidence 999998765322111 1112344778888888889999999999999999999 67776532211 0 01111
Q ss_pred ccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 659 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
........+. .....+.+++.+|++.||++|||+.|+++.|+++..
T Consensus 254 ~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 254 MEGGLLDKPD---NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp HTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred HcCCcCCCCC---CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 1111011111 122456788999999999999999999999988743
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=328.74 Aligned_cols=253 Identities=20% Similarity=0.245 Sum_probs=195.0
Q ss_pred hhhhhcCCCCCccEEEE-----cCCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEc--CCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAV-----LPTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~-----~~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~lv~E 521 (710)
..+.||+|+||.||+|. ..+|..||||++.... ...+.+.+|++++++++||||+++++++.. ++..++|||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 106 (327)
T 3lxl_A 27 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVME 106 (327)
T ss_dssp EEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEE
T ss_pred hhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEe
Confidence 77899999999999998 3578999999998653 345678999999999999999999999874 456899999
Q ss_pred ecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-
Q 005177 522 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 597 (710)
Q Consensus 522 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~- 597 (710)
|+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 183 (327)
T 3lxl_A 107 YLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY 183 (327)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSE
T ss_pred ecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceecccCCcc
Confidence 9999999999965 478999999999999999999998 999999999999999999999999999986542211
Q ss_pred ----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCC--------cccccccccccccccccC
Q 005177 598 ----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ--------NKPIDGLLGEMYNENEVG 665 (710)
Q Consensus 598 ----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 665 (710)
....+...|.+||......++.++|||||||++|||+||+.|+....... .........+.......
T Consensus 184 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 262 (327)
T 3lxl_A 184 YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQR- 262 (327)
T ss_dssp EECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCC-
T ss_pred ceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccC-
Confidence 11113344678888888888999999999999999999999876321100 00000000011111100
Q ss_pred CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 666 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 666 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
.+........+.+++.+|++.||++|||+.|++++|+.+..
T Consensus 263 -~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 303 (327)
T 3lxl_A 263 -LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 303 (327)
T ss_dssp -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred -CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 00111223457789999999999999999999999988754
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-38 Score=342.28 Aligned_cols=247 Identities=17% Similarity=0.101 Sum_probs=192.8
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
++|. ..+.||+|+||.||+|.. .+|+.||||+++.... ..+.+.+|+.++.+++|||||+++++|.+++..|+
T Consensus 74 ~~y~--~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~l 151 (437)
T 4aw2_A 74 EDFE--ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYL 151 (437)
T ss_dssp GGEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEE
T ss_pred hheE--EEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEE
Confidence 4466 778999999999999986 5689999999985322 23448899999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 519 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
|||||++|+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 152 V~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~ 228 (437)
T 4aw2_A 152 VMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 228 (437)
T ss_dssp EECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhhhhhcccC
Confidence 9999999999999965 568999999999999999999998 9999999999999999999999999999765332
Q ss_pred CC---CCcccccccCchhhhh-----ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccccc-ccCC
Q 005177 596 DG---SFPAKIAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN-EVGS 666 (710)
Q Consensus 596 ~~---~~~~~~~~~~~~e~~~-----~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 666 (710)
.. ....++.+|.+||+.. ...++.++|||||||++|||+||+.||.+...... ...+.... ....
T Consensus 229 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~------~~~i~~~~~~~~~ 302 (437)
T 4aw2_A 229 GTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET------YGKIMNHKERFQF 302 (437)
T ss_dssp SCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH------HHHHHTHHHHCCC
T ss_pred CCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH------HHhhhhccccccC
Confidence 21 1123455678888876 45688899999999999999999999975432110 11111100 0000
Q ss_pred CcchHHHHHHHHHHHhhcCCCCCCC--CCCHHHHHHH
Q 005177 667 SSSLQDEIKLVLDVALLCTRSTPSD--RPSMEEALKL 701 (710)
Q Consensus 667 ~~~~~~~~~~~~~l~~~Cl~~~p~~--RPs~~evl~~ 701 (710)
+.........+.+++.+|+..+|++ ||+++|++++
T Consensus 303 p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 303 PTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp CSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred CcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 1111112345678888999888888 9999999864
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-37 Score=332.12 Aligned_cols=254 Identities=13% Similarity=0.112 Sum_probs=194.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCC--ceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRH--QAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~--~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|.. .+|+.||||+++.... ..+.+.+|++++++++|||||++++++.+.+ ..++||||++
T Consensus 13 i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~ 92 (396)
T 4eut_A 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (396)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCT
T ss_pred EEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCC
Confidence 678899999999999986 5699999999986432 3567789999999999999999999998765 6799999999
Q ss_pred CCChhhhhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe----cCCCceEEcccCcccccccc
Q 005177 525 NGNLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF----DENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 525 ~gsL~~~l~~-----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl----~~~~~~kl~DfGla~~~~~~ 595 (710)
+|+|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.....
T Consensus 93 ~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~ 169 (396)
T 4eut_A 93 CGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (396)
T ss_dssp TEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCG
T ss_pred CCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCC
Confidence 9999999975 278999999999999999999998 99999999999999 77888999999999865432
Q ss_pred CCC-CcccccccCchhhhhc--------cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc--ccccccc--------
Q 005177 596 DGS-FPAKIAWTESGEFYNA--------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK--PIDGLLG-------- 656 (710)
Q Consensus 596 ~~~-~~~~~~~~~~~e~~~~--------~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~--~~~~~~~-------- 656 (710)
... ...+...|.+||.... ..++.++|||||||++|||+||+.||......... .......
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (396)
T 4eut_A 170 EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAIS 249 (396)
T ss_dssp GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCE
T ss_pred CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccch
Confidence 211 1223445777887654 45778899999999999999999998632211100 0000000
Q ss_pred cc---------ccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 657 EM---------YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 657 ~~---------~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
.. ..................+.+++.+|++.||++||+++|+++.++++-
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il 308 (396)
T 4eut_A 250 GVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (396)
T ss_dssp EEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHH
T ss_pred hheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHh
Confidence 00 000000011112445566779999999999999999999999887653
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-37 Score=319.73 Aligned_cols=246 Identities=20% Similarity=0.236 Sum_probs=190.0
Q ss_pred hhhhhcCCCCCccEEEEcCC----CcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEc-CCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVLPT----GITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYN-RHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~----g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-~~~~~lv~Ey 522 (710)
..+.||+|+||.||+|...+ +..||||.+.... ...+.+.+|++++++++||||++++++|.+ ++..++||||
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~ 108 (298)
T 3f66_A 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 108 (298)
T ss_dssp EEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEEC
T ss_pred hcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeC
Confidence 66889999999999998532 3468999987532 245678899999999999999999999754 5678999999
Q ss_pred cCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--
Q 005177 523 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-- 597 (710)
Q Consensus 523 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-- 597 (710)
+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 109 ~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~ 185 (298)
T 3f66_A 109 MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 185 (298)
T ss_dssp CTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCB
T ss_pred CCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccccccchhc
Confidence 999999999965 467889999999999999999998 999999999999999999999999999976532211
Q ss_pred ----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 598 ----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 598 ----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
....+...+.+||......++.++||||+||++|||+||+.|+..+........ ..........+...
T Consensus 186 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~--- 257 (298)
T 3f66_A 186 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV-----YLLQGRRLLQPEYC--- 257 (298)
T ss_dssp C-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHH-----HHHTTCCCCCCTTC---
T ss_pred cccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHH-----HHhcCCCCCCCccC---
Confidence 111123346788888888899999999999999999997666553332221111 11111101111111
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
...+.+++.+|++.||++|||++|+++.|+++.
T Consensus 258 ~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 290 (298)
T 3f66_A 258 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 290 (298)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 235678899999999999999999999998764
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=345.24 Aligned_cols=300 Identities=21% Similarity=0.200 Sum_probs=229.9
Q ss_pred CcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEE
Q 005177 75 TIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVL 154 (710)
Q Consensus 75 ~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L 154 (710)
..++.++++++.+.+..+..+.. +++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|+++++|++|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~--l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L 102 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTR--YSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTEL 102 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGG--GTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEE
T ss_pred CCCcEEECCCCCCCCcCHHHHhC--CCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEE
Confidence 36888999999998866666777 8999999999999999889999999999999999999997666689999999999
Q ss_pred ECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccc--cccccccccccccc
Q 005177 155 DAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG--MLKTVTHMEIGYNF 232 (710)
Q Consensus 155 ~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~--~l~~L~~L~l~~n~ 232 (710)
+|++|.+++..|..|+++++|++|+|++|.+++..|..++++++|++|++++|.+++..|..+. .+++|+.|++++|.
T Consensus 103 ~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~ 182 (680)
T 1ziw_A 103 HLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQ 182 (680)
T ss_dssp ECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCC
T ss_pred ECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCc
Confidence 9999999987788899999999999999999998899999999999999999999887777654 45889999999998
Q ss_pred ccccCCccccCC---------------------------CccchhccccccCCccCchhccCCCC--CcEEEccccccCC
Q 005177 233 YQGNIPWQLGNM---------------------------SEVQYLDIAGANLSGSIPKELSNLTK--LESLFLFRNQLAG 283 (710)
Q Consensus 233 ~~g~~p~~l~~l---------------------------~~L~~L~ls~n~l~g~~p~~l~~l~~--L~~L~L~~n~l~~ 283 (710)
+++..|..+..+ ++|+.|++++|++++..|..+..++. |+.|++++|.+++
T Consensus 183 l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~ 262 (680)
T 1ziw_A 183 IKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNV 262 (680)
T ss_dssp CCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCE
T ss_pred ccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCc
Confidence 887777655543 34556666666666666666666543 7777777777777
Q ss_pred CCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcc-----cCCc----ccCCCCCCcEEeccCCCCC
Q 005177 284 QVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSG-----TVPE----SLVQLPSLEILFIWNNYFS 354 (710)
Q Consensus 284 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g-----~~p~----~~~~l~~L~~L~L~~N~l~ 354 (710)
..|..|..+++|++|++++|++.+..|..|..+++|+.|++++|...+ .+|. .+..+++|++|++++|.++
T Consensus 263 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~ 342 (680)
T 1ziw_A 263 VGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIP 342 (680)
T ss_dssp ECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBC
T ss_pred cCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccC
Confidence 666667777777777777777776666666666666666666554432 2222 4555666666666666666
Q ss_pred CCCCcccCCCCCCcEEECCCCc
Q 005177 355 GSLPENLGRNSKLRWVDVSTNN 376 (710)
Q Consensus 355 g~~p~~l~~~~~L~~L~ls~N~ 376 (710)
+..|..+..+++|+.|++++|.
T Consensus 343 ~~~~~~~~~l~~L~~L~Ls~n~ 364 (680)
T 1ziw_A 343 GIKSNMFTGLINLKYLSLSNSF 364 (680)
T ss_dssp CCCTTTTTTCTTCCEEECTTCB
T ss_pred CCChhHhccccCCcEEECCCCc
Confidence 6555555555555555555444
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-37 Score=325.84 Aligned_cols=252 Identities=19% Similarity=0.240 Sum_probs=194.8
Q ss_pred hhhhhcCCCCCccEEEEc-----CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcC--CceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVL-----PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-----~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ 520 (710)
..+.||+|+||.||++.. .+|+.||||+++... ...+.+.+|++++++++||||+++++++.+. ...++||
T Consensus 35 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 114 (318)
T 3lxp_A 35 KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVM 114 (318)
T ss_dssp EEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEE
T ss_pred hhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEE
Confidence 678899999999998863 378999999998643 3356789999999999999999999999874 5789999
Q ss_pred eecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--
Q 005177 521 DYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-- 597 (710)
Q Consensus 521 Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-- 597 (710)
||+++|+|.+++.. ..++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 115 e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~ 191 (318)
T 3lxp_A 115 EYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 191 (318)
T ss_dssp CCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEE
T ss_pred ecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccccccccccc
Confidence 99999999999976 578999999999999999999999 999999999999999999999999999986543211
Q ss_pred ---CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCC----Cccccc----ccccccccccccCC
Q 005177 598 ---SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSL----QNKPID----GLLGEMYNENEVGS 666 (710)
Q Consensus 598 ---~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~----~~~~~~----~~~~~~~~~~~~~~ 666 (710)
....+..++.+||......++.++|||||||++|||+||+.|+...... ..+... ....+.......
T Consensus 192 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 269 (318)
T 3lxp_A 192 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGER-- 269 (318)
T ss_dssp EC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCC--
T ss_pred ccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccC--
Confidence 1112334467888888888889999999999999999999987632110 000000 000111111100
Q ss_pred CcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 667 SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 667 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
.+........+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 270 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~ 309 (318)
T 3lxp_A 270 LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVH 309 (318)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 0011122346778999999999999999999999998764
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-37 Score=321.59 Aligned_cols=246 Identities=18% Similarity=0.159 Sum_probs=185.7
Q ss_pred hhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-hHHHHHHHHHHHhc-cCCCCceeEEEEEEcCCceeEEEeecCCCCh
Q 005177 452 EEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGT-VRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~-l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
+.||+|+||.||+|.. .+|+.||||+++.... ..+.+.+|++++.+ .+||||+++++++.+++..++||||+++|+|
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 98 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI 98 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcH
Confidence 6799999999999985 6899999999976432 35678899999988 4799999999999999999999999999999
Q ss_pred hhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc---eEEcccCccccccccCC------
Q 005177 529 SEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME---PHLAEFGFKYLTQLADG------ 597 (710)
Q Consensus 529 ~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~---~kl~DfGla~~~~~~~~------ 597 (710)
.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++. +||+|||+++.......
T Consensus 99 ~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 175 (316)
T 2ac3_A 99 LSHIHKRRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIST 175 (316)
T ss_dssp HHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------
T ss_pred HHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccc
Confidence 999965 578899999999999999999999 9999999999999998766 99999999875432110
Q ss_pred ---CCcccccccCchhhhhc-----cCCccccceeeHHHHHHHHHhCCCCCCCCCCC-Ccccccc--------ccccccc
Q 005177 598 ---SFPAKIAWTESGEFYNA-----MKEEMYMDVYGFGEIILEILTNGRLTNAGSSL-QNKPIDG--------LLGEMYN 660 (710)
Q Consensus 598 ---~~~~~~~~~~~~e~~~~-----~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~-~~~~~~~--------~~~~~~~ 660 (710)
....++..|.+||.... ..++.++|||||||++|||+||+.||...... ..|.... ....+..
T Consensus 176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 255 (316)
T 2ac3_A 176 PELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQE 255 (316)
T ss_dssp ------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHH
T ss_pred cccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhc
Confidence 01113445777887654 45788999999999999999999998754321 1111110 0111111
Q ss_pred ccccCCCc-chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 661 ENEVGSSS-SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 661 ~~~~~~~~-~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.. ...+. ........+.+++.+|++.||++|||+.|++++
T Consensus 256 ~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 256 GK-YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp CC-CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cC-cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 11 11010 011123567899999999999999999999874
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-37 Score=316.83 Aligned_cols=244 Identities=17% Similarity=0.170 Sum_probs=189.9
Q ss_pred hhhhhcCCCCCccEEEEcC----CCcEEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~----~g~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
..+.||+|+||.||+|... ++..||||.+... ....+.+.+|++++++++||||+++++++.+ +..++||||+
T Consensus 16 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 94 (281)
T 3cc6_A 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELY 94 (281)
T ss_dssp EEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred EEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEecC
Confidence 6788999999999999852 2457999999864 2346778999999999999999999999865 4578999999
Q ss_pred CCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC---
Q 005177 524 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--- 597 (710)
Q Consensus 524 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--- 597 (710)
++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 95 ~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 171 (281)
T 3cc6_A 95 PYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA 171 (281)
T ss_dssp TTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC--------
T ss_pred CCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccccccccccc
Confidence 99999999964 478999999999999999999998 999999999999999999999999999876543211
Q ss_pred CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHH
Q 005177 598 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 676 (710)
Q Consensus 598 ~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (710)
........+.+||......++.++|||||||++|||+| |+.|+........ ...+........+.. ....
T Consensus 172 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~------~~~~~~~~~~~~~~~---~~~~ 242 (281)
T 3cc6_A 172 SVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV------IGVLEKGDRLPKPDL---CPPV 242 (281)
T ss_dssp -CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGH------HHHHHHTCCCCCCTT---CCHH
T ss_pred ccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHH------HHHHhcCCCCCCCCC---CCHH
Confidence 11112334778888888889999999999999999999 9998864322110 001111100111111 1245
Q ss_pred HHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 677 VLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 677 ~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
+.+++.+|++.||++|||+.|+++.|+.+.
T Consensus 243 l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 243 LYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 678899999999999999999999998763
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-37 Score=325.14 Aligned_cols=245 Identities=19% Similarity=0.260 Sum_probs=189.1
Q ss_pred hhhhhcCCCCCccEEEEcCC-----CcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVLPT-----GITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~-----g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
..+.||+|+||.||+|.... +..||||.++... .....+.+|++++++++||||+++++++.+.+..++||||
T Consensus 48 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 127 (333)
T 1mqb_A 48 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEY 127 (333)
T ss_dssp EEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred cccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeC
Confidence 56889999999999998532 3469999998642 2356788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC
Q 005177 523 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 599 (710)
Q Consensus 523 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 599 (710)
+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 128 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 204 (333)
T 1mqb_A 128 MENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAT 204 (333)
T ss_dssp CTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-----------
T ss_pred CCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhccccccc
Confidence 999999999965 478999999999999999999998 99999999999999999999999999988654321111
Q ss_pred -----cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 600 -----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 600 -----~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
......+.+||......++.++|||||||++|||+| |+.|+....... ....+.+......+. ..
T Consensus 205 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~------~~~~~~~~~~~~~~~---~~ 275 (333)
T 1mqb_A 205 YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE------VMKAINDGFRLPTPM---DC 275 (333)
T ss_dssp ------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHHHTTCCCCCCT---TC
T ss_pred cccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH------HHHHHHCCCcCCCcc---cC
Confidence 111234678888888889999999999999999999 888886432110 111111111011111 12
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
...+.+++.+||+.||++||++.|+++.|+.+.
T Consensus 276 ~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 308 (333)
T 1mqb_A 276 PSAIYQLMMQCWQQERARRPKFADIVSILDKLI 308 (333)
T ss_dssp BHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 345678899999999999999999999998763
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-37 Score=324.53 Aligned_cols=248 Identities=22% Similarity=0.288 Sum_probs=192.7
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcE--EEEEEeecc--chhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGIT--VSVKKIEWG--ATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~--vAvK~l~~~--~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 518 (710)
.|. ..+.||+|+||.||+|.. .+|.. ||||+++.. ....+.+.+|++++.++ +||||+++++++.+++..++
T Consensus 26 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 26 DIK--FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GCE--EEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred Hcc--ceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 355 678999999999999986 45664 499999753 22456788999999999 89999999999999999999
Q ss_pred EEeecCCCChhhhhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc
Q 005177 519 LYDYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~ 580 (710)
||||+++|+|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCe
Confidence 9999999999999964 367889999999999999999998 9999999999999999999
Q ss_pred eEEcccCccccccccCCCC-cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccc
Q 005177 581 PHLAEFGFKYLTQLADGSF-PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEM 658 (710)
Q Consensus 581 ~kl~DfGla~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~ 658 (710)
+||+|||+++......... ......+.+||......++.++|||||||++|||+| |+.|+.+..... ....+
T Consensus 181 ~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~------~~~~~ 254 (327)
T 1fvr_A 181 AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE------LYEKL 254 (327)
T ss_dssp EEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHG
T ss_pred EEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH------HHHHh
Confidence 9999999987543221111 112334678888887788999999999999999998 988886432111 01111
Q ss_pred ccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 659 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
........+. .....+.+++.+|++.||++|||+.|+++.|+.+.
T Consensus 255 ~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 299 (327)
T 1fvr_A 255 PQGYRLEKPL---NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 299 (327)
T ss_dssp GGTCCCCCCT---TBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hcCCCCCCCC---CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1110011111 11245778999999999999999999999998763
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-37 Score=318.34 Aligned_cols=243 Identities=18% Similarity=0.166 Sum_probs=191.1
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-------hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-------RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-------~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
..+.||+|+||.||+|.. .+|+.||||.++.... ..+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 88 (283)
T 3bhy_A 9 MGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILE 88 (283)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEe
Confidence 678899999999999986 4799999999986421 25678999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC----ceEEcccCcccccccc
Q 005177 522 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM----EPHLAEFGFKYLTQLA 595 (710)
Q Consensus 522 y~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~----~~kl~DfGla~~~~~~ 595 (710)
|+++++|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++ .+||+|||+++.....
T Consensus 89 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~ 165 (283)
T 3bhy_A 89 LVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 165 (283)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC--
T ss_pred ecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecccceeccCC
Confidence 9999999999965 578999999999999999999998 999999999999999877 8999999998765432
Q ss_pred CCC-CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 596 DGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 596 ~~~-~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
... ...+...+.+||......++.++||||||+++|||+||+.|+....... ....+................
T Consensus 166 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 239 (283)
T 3bhy_A 166 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE------TLTNISAVNYDFDEEYFSNTS 239 (283)
T ss_dssp ------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTTCCCCCHHHHTTCC
T ss_pred CcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH------HHHHhHhcccCCcchhcccCC
Confidence 111 1123445778898888888999999999999999999999986432111 001111000000000011123
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..+.+++.+|++.||++|||+.|+++.
T Consensus 240 ~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 240 ELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred HHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 457789999999999999999999873
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-37 Score=329.60 Aligned_cols=242 Identities=16% Similarity=0.129 Sum_probs=192.2
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCcee
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 517 (710)
++|. ..+.||+|+||.||+|.. .+|+.||||.++... ...+.+..|.+++..+ +||||+++++++.+.+..|
T Consensus 20 ~~y~--~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 20 TDFN--FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp TTEE--EEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred HHcE--EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3455 778999999999999986 468899999998642 2345678889999887 7999999999999999999
Q ss_pred EEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 518 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
+||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 98 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 174 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 174 (353)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence 99999999999999975 678999999999999999999998 9999999999999999999999999999753221
Q ss_pred C--CCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 596 D--GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 596 ~--~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
. .....++..|.+||......++.++||||+||++|||++|+.||.+.... .....+.... ...+. ..
T Consensus 175 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------~~~~~i~~~~-~~~p~---~~ 244 (353)
T 2i0e_A 175 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED------ELFQSIMEHN-VAYPK---SM 244 (353)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-CCCCT---TS
T ss_pred CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH------HHHHHHHhCC-CCCCC---CC
Confidence 1 11222455678889888888999999999999999999999998743211 1111121111 11111 12
Q ss_pred HHHHHHHHhhcCCCCCCCCCC-----HHHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPS-----MEEALK 700 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs-----~~evl~ 700 (710)
...+.+++.+|++.||++||+ ++|+.+
T Consensus 245 s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 245 SKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp CHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 345778999999999999995 467664
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=336.31 Aligned_cols=231 Identities=17% Similarity=0.146 Sum_probs=179.7
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc----chhHHHHHHHH---HHHhccCCCCceeEE-------EEEEcCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG----ATRIKIVSEFI---TRIGTVRHKNLIRLL-------GFCYNRH 514 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~----~~~~~~~~~e~---~~l~~l~H~niv~l~-------g~~~~~~ 514 (710)
..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|+ +.+++++|||||+++ +++.+++
T Consensus 77 ~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 156 (377)
T 3byv_A 77 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ 156 (377)
T ss_dssp EEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTT
T ss_pred EcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccC
Confidence 678999999999999996 67999999999743 23457788999 556677899999998 6766553
Q ss_pred c-----------------eeEEEeecCCCChhhhhhc--CC-------CHHHHHHHHHHHHHHHHHHhcCCCCCceecCC
Q 005177 515 Q-----------------AYLLYDYLPNGNLSEKIRT--KR-------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDL 568 (710)
Q Consensus 515 ~-----------------~~lv~Ey~~~gsL~~~l~~--~~-------~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDl 568 (710)
. .|+||||+ +|+|.+++.. .. +|..+..|+.|+++||+|||+. +|+||||
T Consensus 157 ~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDi 232 (377)
T 3byv_A 157 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYL 232 (377)
T ss_dssp SCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred CccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 2 79999999 6899999975 22 2577889999999999999999 9999999
Q ss_pred CCCCeEecCCCceEEcccCccccccccCCCCcccccccCchhhhhcc-----------CCccccceeeHHHHHHHHHhCC
Q 005177 569 KASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAM-----------KEEMYMDVYGFGEIILEILTNG 637 (710)
Q Consensus 569 k~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~e~~~~~-----------~~~~~~DVySfGvvl~Elltg~ 637 (710)
||+|||++.++.+||+|||+++.......... + ..|.+||+.... .++.++|||||||++|||+||+
T Consensus 233 kp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~-g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~ 310 (377)
T 3byv_A 233 RPVDIVLDQRGGVFLTGFEHLVRDGARVVSSV-S-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCAD 310 (377)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTCEEECCC-C-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSS
T ss_pred CHHHEEEcCCCCEEEEechhheecCCcccCCC-C-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCC
Confidence 99999999999999999999986443222222 3 557888888776 7899999999999999999999
Q ss_pred CCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 638 RLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 638 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
.|+.+...... ...+.... ... ...+.+++.+||+.||++|||+.|+++
T Consensus 311 ~Pf~~~~~~~~------~~~~~~~~-----~~~---~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 311 LPITKDAALGG------SEWIFRSC-----KNI---PQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp CCC------CC------SGGGGSSC-----CCC---CHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred CCCcccccccc------hhhhhhhc-----cCC---CHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 99874332211 11111110 111 245678899999999999999999986
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-37 Score=325.57 Aligned_cols=245 Identities=16% Similarity=0.217 Sum_probs=186.7
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcE----EEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGIT----VSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~----vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
..+.||+|+||.||+|.. .+|+. ||+|.+... ....+.+.+|++++++++|||||+++++|.+++ .++||||
T Consensus 19 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~ 97 (327)
T 3lzb_A 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQL 97 (327)
T ss_dssp EEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECC
T ss_pred EEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEe
Confidence 778999999999999984 45554 577777543 234677899999999999999999999998754 7899999
Q ss_pred cCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC
Q 005177 523 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 599 (710)
Q Consensus 523 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 599 (710)
+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 98 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~ 174 (327)
T 3lzb_A 98 MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174 (327)
T ss_dssp CSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC-----------
T ss_pred cCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccccc
Confidence 999999999965 468899999999999999999998 99999999999999999999999999998654322111
Q ss_pred ----cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 600 ----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 600 ----~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
..+...|.+||......++.++|||||||++|||+| |+.|+.+..... ....+........+.. ..
T Consensus 175 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~---~~ 245 (327)
T 3lzb_A 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------ISSILEKGERLPQPPI---CT 245 (327)
T ss_dssp -----CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG------HHHHHHTTCCCCCCTT---BC
T ss_pred cccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH------HHHHHHcCCCCCCCcc---CC
Confidence 112334778888888889999999999999999999 888886432211 0000101100111111 22
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
..+.+++.+||+.||++||++.|+++.|+.+.+
T Consensus 246 ~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 246 IDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 356788999999999999999999999988753
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-37 Score=331.89 Aligned_cols=239 Identities=15% Similarity=0.111 Sum_probs=182.8
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHH-HhccCCCCceeEEEEEEcCCcee
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITR-IGTVRHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~-l~~l~H~niv~l~g~~~~~~~~~ 517 (710)
++|. ..+.||+|+||.||+|.. .+|+.||||.++.... ..+.+.+|..+ ++.++|||||++++++.+.+..|
T Consensus 38 ~~y~--~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~ 115 (373)
T 2r5t_A 38 SDFH--FLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY 115 (373)
T ss_dssp GGEE--EEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred hheE--EEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence 3455 778999999999999986 5688999999986432 23445566665 57789999999999999999999
Q ss_pred EEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 518 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
+||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 116 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 99999999999999975 567888899999999999999998 9999999999999999999999999999864322
Q ss_pred C--CCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 596 D--GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 596 ~--~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
. .....++..|.+||+.....++.++|||||||++|||++|+.||.+.... .....+.... ...+...
T Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------~~~~~i~~~~-~~~~~~~--- 262 (373)
T 2r5t_A 193 NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA------EMYDNILNKP-LQLKPNI--- 262 (373)
T ss_dssp CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH------HHHHHHHHSC-CCCCSSS---
T ss_pred CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH------HHHHHHHhcc-cCCCCCC---
Confidence 1 11222455688889988888999999999999999999999998643211 1111121111 1111111
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEE 697 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~e 697 (710)
...+.+++.+|++.||++||++.+
T Consensus 263 ~~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 263 TNSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp CHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred CHHHHHHHHHHcccCHHhCCCCCC
Confidence 245678889999999999999854
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-37 Score=334.40 Aligned_cols=254 Identities=22% Similarity=0.287 Sum_probs=183.7
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccC-CCCceeEEEEEEcCC--
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRH-- 514 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~-- 514 (710)
+.+.|. ..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|+.++.+++ |||||++++++..++
T Consensus 7 ~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~ 84 (388)
T 3oz6_A 7 VLRKYE--LVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDR 84 (388)
T ss_dssp HHTTEE--EEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS
T ss_pred ccCceE--EEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC
Confidence 455566 788999999999999985 68999999999643 234566778999999997 999999999998654
Q ss_pred ceeEEEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccc
Q 005177 515 QAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 515 ~~~lv~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~ 593 (710)
..|+|||||+ |+|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 85 ~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 160 (388)
T 3oz6_A 85 DVYLVFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFV 160 (388)
T ss_dssp CEEEEEECCS-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred EEEEEecccC-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence 6899999998 699998875 578889999999999999999998 99999999999999999999999999997642
Q ss_pred ccC-----------------------CCCcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc
Q 005177 594 LAD-----------------------GSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK 649 (710)
Q Consensus 594 ~~~-----------------------~~~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~ 649 (710)
... .....++.+|.+||+..+ ..++.++||||+||++|||+||+.||.+.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~ 240 (388)
T 3oz6_A 161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL 240 (388)
T ss_dssp SCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred ccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 110 001124566888888765 57899999999999999999999998754321110
Q ss_pred ccc-ccc--------cccccc---------------cccCCCcchH-------------HHHHHHHHHHhhcCCCCCCCC
Q 005177 650 PID-GLL--------GEMYNE---------------NEVGSSSSLQ-------------DEIKLVLDVALLCTRSTPSDR 692 (710)
Q Consensus 650 ~~~-~~~--------~~~~~~---------------~~~~~~~~~~-------------~~~~~~~~l~~~Cl~~~p~~R 692 (710)
... ... ..+..+ .......... .....+.+++.+||+.||++|
T Consensus 241 ~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R 320 (388)
T 3oz6_A 241 ERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKR 320 (388)
T ss_dssp HHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGS
T ss_pred HHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccC
Confidence 000 000 000000 0000000000 112467899999999999999
Q ss_pred CCHHHHHHH
Q 005177 693 PSMEEALKL 701 (710)
Q Consensus 693 Ps~~evl~~ 701 (710)
||++|++++
T Consensus 321 ~t~~e~l~H 329 (388)
T 3oz6_A 321 ISANDALKH 329 (388)
T ss_dssp CCHHHHTTS
T ss_pred CCHHHHhCC
Confidence 999999876
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-37 Score=329.42 Aligned_cols=249 Identities=20% Similarity=0.252 Sum_probs=193.3
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---------hHHHHHHHHHHHhcc-CCCCceeEEEEE
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---------RIKIVSEFITRIGTV-RHKNLIRLLGFC 510 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---------~~~~~~~e~~~l~~l-~H~niv~l~g~~ 510 (710)
..+.|. ..+.||+|+||.||+|.. .+|+.||||.++.... ..+.+.+|+.++.++ +||||+++++++
T Consensus 92 ~~~~y~--~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 169 (365)
T 2y7j_A 92 FYQKYD--PKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169 (365)
T ss_dssp HHHHEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhhhcc--cceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 344566 678999999999999997 5799999999975421 145678899999999 799999999999
Q ss_pred EcCCceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCc
Q 005177 511 YNRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 588 (710)
Q Consensus 511 ~~~~~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl 588 (710)
...+..++||||+++|+|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 170 ~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG~ 246 (365)
T 2y7j_A 170 ESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGF 246 (365)
T ss_dssp EBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred eeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecCc
Confidence 999999999999999999999975 578999999999999999999998 999999999999999999999999999
Q ss_pred cccccccCC-CCcccccccCchhhhhc------cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccc
Q 005177 589 KYLTQLADG-SFPAKIAWTESGEFYNA------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNE 661 (710)
Q Consensus 589 a~~~~~~~~-~~~~~~~~~~~~e~~~~------~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 661 (710)
++....... ....++..|.+||+..+ ..++.++|||||||++|||+||+.||....... ....+...
T Consensus 247 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~------~~~~i~~~ 320 (365)
T 2y7j_A 247 SCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL------MLRMIMEG 320 (365)
T ss_dssp CEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHT
T ss_pred ccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhC
Confidence 876543221 11224445778887653 257889999999999999999999986432111 01111111
Q ss_pred cccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 662 NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
......+.+......+.+++.+|++.||++|||+.|+++.
T Consensus 321 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 321 QYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp CCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1000011111223457789999999999999999999863
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-37 Score=330.02 Aligned_cols=240 Identities=21% Similarity=0.263 Sum_probs=189.3
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+++..++|
T Consensus 55 ~y~--~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 55 LFS--DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hee--eeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 355 678899999999999984 789999999997532 2246788999999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC
Q 005177 520 YDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 596 (710)
|||++ |++.+.+.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 133 ~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~ 208 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN 208 (348)
T ss_dssp EECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBC
T ss_pred EecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCCC
Confidence 99998 688888743 578999999999999999999999 99999999999999999999999999997654322
Q ss_pred CCCcccccccCchhhhh---ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccc-cccCCCcchHH
Q 005177 597 GSFPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNE-NEVGSSSSLQD 672 (710)
Q Consensus 597 ~~~~~~~~~~~~~e~~~---~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 672 (710)
. ..++..|.+||... ...++.++|||||||++|||+||+.|+........ ...+... .+.......
T Consensus 209 -~-~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~------~~~~~~~~~~~~~~~~~-- 278 (348)
T 1u5q_A 209 -S-FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------LYHIAQNESPALQSGHW-- 278 (348)
T ss_dssp -C-CCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHHSCCCCCCCTTS--
T ss_pred -c-ccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH------HHHHHhcCCCCCCCCCC--
Confidence 1 22345577888764 45688899999999999999999999864332110 0011100 000011111
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 673 EIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
...+.+++.+||+.||++|||++|+++.
T Consensus 279 -~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 279 -SEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp -CHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred -CHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 2346688899999999999999999864
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-37 Score=317.32 Aligned_cols=243 Identities=19% Similarity=0.197 Sum_probs=187.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEc----CCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYN----RHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~~~lv~E 521 (710)
....||+|+||.||+|.. .++..||+|.+.... ...+.+.+|++++++++||||+++++++.. +...++|||
T Consensus 30 ~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e 109 (290)
T 1t4h_A 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 109 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEE
T ss_pred eeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEE
Confidence 556899999999999985 678899999998642 345678899999999999999999999875 346899999
Q ss_pred ecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec-CCCceEEcccCccccccccCCC
Q 005177 522 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-ENMEPHLAEFGFKYLTQLADGS 598 (710)
Q Consensus 522 y~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~-~~~~~kl~DfGla~~~~~~~~~ 598 (710)
|+++|+|.+++.. ..++..+..++.|+++||+|||+.. ++|+||||||+||+++ .++.+||+|||++.........
T Consensus 110 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~ 188 (290)
T 1t4h_A 110 LMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK 188 (290)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBE
T ss_pred ecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccccc
Confidence 9999999999975 6789999999999999999999981 1399999999999998 7899999999998754432211
Q ss_pred CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHH
Q 005177 599 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 678 (710)
Q Consensus 599 ~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (710)
...+...+.+||... ..++.++||||+||++|||+||+.|+.......... ..+.... .. ..........+.
T Consensus 189 ~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~-----~~~~~~~-~~-~~~~~~~~~~l~ 260 (290)
T 1t4h_A 189 AVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIY-----RRVTSGV-KP-ASFDKVAIPEVK 260 (290)
T ss_dssp ESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHH-----HHHTTTC-CC-GGGGGCCCHHHH
T ss_pred cccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHH-----HHHhccC-Cc-cccCCCCCHHHH
Confidence 122344577788765 458899999999999999999999987533221100 0110000 00 000011124577
Q ss_pred HHHhhcCCCCCCCCCCHHHHHHH
Q 005177 679 DVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 679 ~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+++.+||+.||++|||+.|++++
T Consensus 261 ~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 261 EIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp HHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHccCChhhCCCHHHHhhC
Confidence 89999999999999999999863
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=319.46 Aligned_cols=245 Identities=19% Similarity=0.250 Sum_probs=183.1
Q ss_pred hhhhhcCCCCCccEEEEcC----CCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCC-----cee
Q 005177 450 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH-----QAY 517 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~----~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-----~~~ 517 (710)
..+.||+|+||.||+|... ++..||||.++... ...+.+.+|++++++++||||+++++++.+.+ ..+
T Consensus 38 ~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 117 (313)
T 3brb_A 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPM 117 (313)
T ss_dssp EEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEE
T ss_pred eccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccE
Confidence 6778999999999999752 45689999997542 23567889999999999999999999998755 359
Q ss_pred EEEeecCCCChhhhhhc--------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcc
Q 005177 518 LLYDYLPNGNLSEKIRT--------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK 589 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~--------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla 589 (710)
+||||+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 118 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl~Dfg~~ 194 (313)
T 3brb_A 118 VILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLS 194 (313)
T ss_dssp EEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEECSCSCC
T ss_pred EEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEEeecCcc
Confidence 99999999999999832 468999999999999999999998 9999999999999999999999999998
Q ss_pred ccccccCC----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccccccccc
Q 005177 590 YLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEV 664 (710)
Q Consensus 590 ~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (710)
+....... ....+...+.+||......++.++|||||||++|||+| |+.|+....... ....+......
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~------~~~~~~~~~~~ 268 (313)
T 3brb_A 195 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE------MYDYLLHGHRL 268 (313)
T ss_dssp ----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG------HHHHHHTTCCC
T ss_pred eecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH------HHHHHHcCCCC
Confidence 76532211 11112334677888888888999999999999999999 667765432211 01111111101
Q ss_pred CCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 665 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 665 ~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
..+ ......+.+++.+||+.||++|||+.|++++|+++.
T Consensus 269 ~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~ 307 (313)
T 3brb_A 269 KQP---EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL 307 (313)
T ss_dssp CCB---TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCC---ccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111 112245778999999999999999999999998763
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=330.09 Aligned_cols=239 Identities=16% Similarity=0.141 Sum_probs=185.7
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccc---hhHHHHHHHHHHHhccC--CCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVR--HKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~--H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||++...+|+.||||++.... ...+.+.+|++++.+++ |||||++++++..++..++||| +.
T Consensus 60 ~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~ 138 (390)
T 2zmd_A 60 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CG 138 (390)
T ss_dssp EEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CC
T ss_pred EEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cC
Confidence 778999999999999998889999999997542 23567899999999997 5999999999999999999999 56
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC----C
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG----S 598 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~----~ 598 (710)
+|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+|||++ ++.+||+|||+++....... .
T Consensus 139 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~ 214 (390)
T 2zmd_A 139 NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKD 214 (390)
T ss_dssp SEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC---------C
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCccccCC
Confidence 7899999975 567888999999999999999998 999999999999996 58999999999986543221 1
Q ss_pred CcccccccCchhhhhc-----------cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccccccc-CC
Q 005177 599 FPAKIAWTESGEFYNA-----------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV-GS 666 (710)
Q Consensus 599 ~~~~~~~~~~~e~~~~-----------~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 666 (710)
...++.+|.+||+... ..++.++|||||||++|||++|+.||....... ..+..+.++... ..
T Consensus 215 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~-----~~~~~~~~~~~~~~~ 289 (390)
T 2zmd_A 215 SQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-----SKLHAIIDPNHEIEF 289 (390)
T ss_dssp CSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-----HHHHHHHCTTSCCCC
T ss_pred CCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH-----HHHHHHhCccccCCC
Confidence 1224556788887754 368889999999999999999999986432211 011122222111 01
Q ss_pred CcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 667 SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 667 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+... ...+.+++.+||+.||++|||+.|+++.
T Consensus 290 ~~~~---~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 290 PDIP---EKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp CCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred Cccc---hHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 1111 2356788999999999999999999864
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-37 Score=322.53 Aligned_cols=249 Identities=20% Similarity=0.238 Sum_probs=189.1
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++++++||||+++++++.+++..++||||+++
T Consensus 7 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (311)
T 4agu_A 7 KIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDH 86 (311)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred EeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCC
Confidence 678899999999999986 5699999999875432 256688999999999999999999999999999999999999
Q ss_pred CChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Ccc
Q 005177 526 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPA 601 (710)
Q Consensus 526 gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~ 601 (710)
++|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ ...
T Consensus 87 ~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 163 (311)
T 4agu_A 87 TVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV 163 (311)
T ss_dssp EHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC----------
T ss_pred chHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccCCCc
Confidence 999998864 578999999999999999999998 9999999999999999999999999999765422211 112
Q ss_pred cccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc-ccccc-------------ccccccccCC
Q 005177 602 KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-DGLLG-------------EMYNENEVGS 666 (710)
Q Consensus 602 ~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~-~~~~~-------------~~~~~~~~~~ 666 (710)
+..++.+||...+ ..++.++||||+||++|||+||+.|+.+......... ..... ..........
T Consensus 164 ~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (311)
T 4agu_A 164 ATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPD 243 (311)
T ss_dssp --GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCC
T ss_pred CCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCC
Confidence 4455778887765 5678999999999999999999999874432110000 00000 0000000000
Q ss_pred C---cc----hHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 667 S---SS----LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 667 ~---~~----~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+ .. .......+.+++.+|++.||++|||++|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 244 PEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp CSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0 00 01223457889999999999999999999864
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=324.32 Aligned_cols=239 Identities=16% Similarity=0.146 Sum_probs=185.4
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCC--CCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRH--KNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H--~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||++...+++.||||++.... ...+.+.+|++++.+++| ||||++++++.+++..++||| +.
T Consensus 13 i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~ 91 (343)
T 3dbq_A 13 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CG 91 (343)
T ss_dssp EEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CC
T ss_pred EEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CC
Confidence 778999999999999999899999999997542 235678899999999987 999999999999999999999 56
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC----
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS---- 598 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~---- 598 (710)
+|+|.+++.. .+++.++..++.|+++||+|||+. +|+||||||+|||++ ++.+||+|||+++........
T Consensus 92 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~ 167 (343)
T 3dbq_A 92 NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKD 167 (343)
T ss_dssp SEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----------
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCcccccccCC
Confidence 7899999975 568899999999999999999998 999999999999997 578999999999865432211
Q ss_pred CcccccccCchhhhhc-----------cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccccccc-CC
Q 005177 599 FPAKIAWTESGEFYNA-----------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV-GS 666 (710)
Q Consensus 599 ~~~~~~~~~~~e~~~~-----------~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 666 (710)
...++.+|.+||+... ..++.++|||||||++|||+||+.||........ ......++... ..
T Consensus 168 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-----~~~~~~~~~~~~~~ 242 (343)
T 3dbq_A 168 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS-----KLHAIIDPNHEIEF 242 (343)
T ss_dssp --CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH-----HHHHHHCTTSCCCC
T ss_pred CCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHH-----HHHHHhcCCcccCC
Confidence 1224556778888754 5678899999999999999999999864322100 11111111101 11
Q ss_pred CcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 667 SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 667 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+... ...+.+++.+||+.||++|||+.|++++
T Consensus 243 ~~~~---~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 243 PDIP---EKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp CCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccC---CHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 1111 1356788999999999999999999864
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-37 Score=336.86 Aligned_cols=246 Identities=14% Similarity=0.077 Sum_probs=191.5
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
++|. ..+.||+|+||.||++.. .+|+.||||+++... ...+.+.+|++++.+++|||||++++++.+++..|+
T Consensus 61 ~~f~--~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~l 138 (412)
T 2vd5_A 61 DDFE--ILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYL 138 (412)
T ss_dssp GGEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEE
T ss_pred hhEE--EEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence 4466 778999999999999986 679999999997532 224457889999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 519 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 139 VmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~ 215 (412)
T 2vd5_A 139 VMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSCLKLRAD 215 (412)
T ss_dssp EECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhheeccCC
Confidence 9999999999999965 578899999999999999999998 9999999999999999999999999999765432
Q ss_pred CC---CCcccccccCchhhhh-------ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccccc-cc
Q 005177 596 DG---SFPAKIAWTESGEFYN-------AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN-EV 664 (710)
Q Consensus 596 ~~---~~~~~~~~~~~~e~~~-------~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~ 664 (710)
.. ....++..|.+||+.. ...++.++|||||||++|||+||+.||.+..... ....+.... ..
T Consensus 216 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~------~~~~i~~~~~~~ 289 (412)
T 2vd5_A 216 GTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE------TYGKIVHYKEHL 289 (412)
T ss_dssp SCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTHHHHC
T ss_pred CccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHH------HHHHHHhcccCc
Confidence 21 1123455677888776 3467889999999999999999999987543211 011111100 00
Q ss_pred CCCcchHHHHHHHHHHHhhcCCCCCCCC---CCHHHHHHH
Q 005177 665 GSSSSLQDEIKLVLDVALLCTRSTPSDR---PSMEEALKL 701 (710)
Q Consensus 665 ~~~~~~~~~~~~~~~l~~~Cl~~~p~~R---Ps~~evl~~ 701 (710)
..+.........+.+++.+|+. +|++| |+++|+.++
T Consensus 290 ~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 290 SLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp CCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred CCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 0011011123467789999999 99998 689998764
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-37 Score=323.26 Aligned_cols=249 Identities=21% Similarity=0.222 Sum_probs=194.1
Q ss_pred cCCchhhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccch--hHHHHHHHHHHHhcc-CCCCceeEEEEEEcCC-
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGAT--RIKIVSEFITRIGTV-RHKNLIRLLGFCYNRH- 514 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~- 514 (710)
.|. ..+.||+|+||.||+|.. .+++.||||.++.... ..+.+.+|++++.++ +||||+++++++...+
T Consensus 28 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 105 (316)
T 2xir_A 28 RLK--LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 105 (316)
T ss_dssp GEE--EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred hee--eeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence 355 778999999999999973 4678999999986432 356788999999999 6999999999998754
Q ss_pred ceeEEEeecCCCChhhhhhcC------------------CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec
Q 005177 515 QAYLLYDYLPNGNLSEKIRTK------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD 576 (710)
Q Consensus 515 ~~~lv~Ey~~~gsL~~~l~~~------------------~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~ 576 (710)
..++||||+++|+|.+++... .++..+..++.|+++||+|||+. +|+||||||+||+++
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~ 182 (316)
T 2xir_A 106 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLS 182 (316)
T ss_dssp CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC
T ss_pred ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEEC
Confidence 589999999999999999752 57888999999999999999998 999999999999999
Q ss_pred CCCceEEcccCccccccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccc
Q 005177 577 ENMEPHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPI 651 (710)
Q Consensus 577 ~~~~~kl~DfGla~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~ 651 (710)
.++.+||+|||+++........ ...+...+.+||......++.++|||||||++|||+| |+.|+.+...... ..
T Consensus 183 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~-~~ 261 (316)
T 2xir_A 183 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FC 261 (316)
T ss_dssp GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH-HH
T ss_pred CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHH-HH
Confidence 9999999999999765322211 1112334778898888889999999999999999999 8888764322111 00
Q ss_pred cccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 652 DGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
..+........+.. ....+.+++.+||+.||++|||+.|++++|+.+.
T Consensus 262 ----~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 262 ----RRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp ----HHHHHTCCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----HHhccCccCCCCCC---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 00101000110111 1245778889999999999999999999998763
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=329.63 Aligned_cols=249 Identities=17% Similarity=0.157 Sum_probs=189.9
Q ss_pred hhhhhcCC--CCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARP--QSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g--~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
..+.||+| +||.||+|.. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.+++..++|||||
T Consensus 29 ~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 108 (389)
T 3gni_B 29 LLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 108 (389)
T ss_dssp EEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEcc
Confidence 77899999 9999999986 579999999998643 23567888999999999999999999999999999999999
Q ss_pred CCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC---
Q 005177 524 PNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--- 596 (710)
Q Consensus 524 ~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~--- 596 (710)
++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||.+.......
T Consensus 109 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~ 185 (389)
T 3gni_B 109 AYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQ 185 (389)
T ss_dssp TTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEEC
T ss_pred CCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeeccccccc
Confidence 99999999864 468899999999999999999998 99999999999999999999999999875432110
Q ss_pred ------CCCcccccccCchhhhhc--cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc--cccccccccccc---
Q 005177 597 ------GSFPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI--DGLLGEMYNENE--- 663 (710)
Q Consensus 597 ------~~~~~~~~~~~~~e~~~~--~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~--~~~~~~~~~~~~--- 663 (710)
.....++..|.+||.... ..++.++|||||||++|||+||+.||.+......... ........+...
T Consensus 186 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (389)
T 3gni_B 186 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPA 265 (389)
T ss_dssp SCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC----------------
T ss_pred cccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccccccc
Confidence 011123344677887765 5788999999999999999999999875332211000 000000000000
Q ss_pred -------------------------------cCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 664 -------------------------------VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 664 -------------------------------~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
....+........+.+++.+||+.||++|||+.|++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 266 EELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ----------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 00000111223467889999999999999999999865
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-37 Score=317.69 Aligned_cols=243 Identities=16% Similarity=0.187 Sum_probs=189.3
Q ss_pred hhh-hhcCCCCCccEEEEc---CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECE-EAARPQSAAGCKAVL---PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~-~ig~g~~g~vy~~~~---~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
..+ .||+|+||.||+|.. .+++.||||.++... ...+.+.+|++++++++||||+++++++ +.+..++||||
T Consensus 20 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~ 98 (291)
T 1xbb_A 20 LEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEM 98 (291)
T ss_dssp EEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEEC
T ss_pred hccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEe
Confidence 444 899999999999953 457899999997642 2356789999999999999999999999 56778999999
Q ss_pred cCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--
Q 005177 523 LPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 598 (710)
Q Consensus 523 ~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~-- 598 (710)
+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 99 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 175 (291)
T 1xbb_A 99 AELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 175 (291)
T ss_dssp CTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEE
T ss_pred CCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCccc
Confidence 999999999975 478899999999999999999999 9999999999999999999999999998765422111
Q ss_pred ---CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 599 ---FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 599 ---~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
.......+.+||......++.++|||||||++|||+| |+.|+.+..... ....+........+. ...
T Consensus 176 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~---~~~ 246 (291)
T 1xbb_A 176 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE------VTAMLEKGERMGCPA---GCP 246 (291)
T ss_dssp C----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH------HHHHHHTTCCCCCCT---TCC
T ss_pred ccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH------HHHHHHcCCCCCCCC---CCC
Confidence 0112233677888877788899999999999999999 988886432211 000110110011111 123
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
..+.+++.+||+.||++||++.|+++.|+++
T Consensus 247 ~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 277 (291)
T 1xbb_A 247 REMYDLMNLCWTYDVENRPGFAAVELRLRNY 277 (291)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 4577899999999999999999999999875
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-36 Score=326.00 Aligned_cols=253 Identities=20% Similarity=0.229 Sum_probs=189.2
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcCC----
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH---- 514 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~---- 514 (710)
.+.|. ..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|++++++++|||||++++++...+
T Consensus 24 ~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 101 (371)
T 2xrw_A 24 LKRYQ--NLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 101 (371)
T ss_dssp ETTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTT
T ss_pred hhhee--EeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccc
Confidence 34455 778999999999999985 67999999999753 223567889999999999999999999998754
Q ss_pred --ceeEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccc
Q 005177 515 --QAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 592 (710)
Q Consensus 515 --~~~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~ 592 (710)
..++||||++ |+|.+.+....++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 102 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 177 (371)
T 2xrw_A 102 FQDVYIVMELMD-ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 177 (371)
T ss_dssp CCEEEEEEECCS-EEHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC----
T ss_pred ccceEEEEEcCC-CCHHHHHhhccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeeccccc
Confidence 6899999998 589999988889999999999999999999998 9999999999999999999999999999865
Q ss_pred cccCCC-CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc-ccc--------c------
Q 005177 593 QLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GLL--------G------ 656 (710)
Q Consensus 593 ~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~-~~~--------~------ 656 (710)
...... ...++..|.+||......++.++||||+||++|||+||+.||.+......+... ... .
T Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 257 (371)
T 2xrw_A 178 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV 257 (371)
T ss_dssp ------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHH
T ss_pred ccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHH
Confidence 432111 112445578889888888999999999999999999999998754321110000 000 0
Q ss_pred ----------------ccccccccCC-CcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 657 ----------------EMYNENEVGS-SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 657 ----------------~~~~~~~~~~-~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+.......+. ..........+.+++.+|++.||++|||++|++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 258 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 0000000000 00112235678899999999999999999999874
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=339.46 Aligned_cols=249 Identities=16% Similarity=0.174 Sum_probs=195.9
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCce
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 516 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 516 (710)
.+.+.|. ..+.||+|+||.||+|.. .+|+.||||++.... .....+.+|++++++++|||||++++++.+.+..
T Consensus 19 ~~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 96 (486)
T 3mwu_A 19 TFAERYN--IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSF 96 (486)
T ss_dssp HHHHHEE--EEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ChhcceE--EeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEE
Confidence 3445566 788999999999999986 589999999997532 2356788999999999999999999999999999
Q ss_pred eEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec---CCCceEEcccCcccc
Q 005177 517 YLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD---ENMEPHLAEFGFKYL 591 (710)
Q Consensus 517 ~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~---~~~~~kl~DfGla~~ 591 (710)
++||||+++|+|.+.+.. ..++.....++.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+++.
T Consensus 97 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 173 (486)
T 3mwu_A 97 YIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (486)
T ss_dssp EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence 999999999999998854 678899999999999999999998 999999999999995 456799999999986
Q ss_pred ccccCC-CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcch
Q 005177 592 TQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 670 (710)
Q Consensus 592 ~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (710)
...... ....++++|.+||+... .++.++||||+||++|||++|+.||.+..... ....+.........+.+
T Consensus 174 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~~~~~~~~~ 246 (486)
T 3mwu_A 174 FQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD------ILKRVETGKYAFDLPQW 246 (486)
T ss_dssp BCCC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTCCCSCSGGG
T ss_pred CCCCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCCCCCCCccc
Confidence 543221 12224566788888765 58899999999999999999999986433211 11111111101111222
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 671 QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 671 ~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
......+.+++.+|++.||++|||+.|++++
T Consensus 247 ~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 247 RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp GGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 2334567789999999999999999999874
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-37 Score=328.06 Aligned_cols=251 Identities=12% Similarity=0.035 Sum_probs=187.8
Q ss_pred cCCchhhhhhcCCCCCccEEEEcC----CCcEEEEEEeeccch------------hHHHHHHHHHHHhccCCCCceeEEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGAT------------RIKIVSEFITRIGTVRHKNLIRLLG 508 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~~----~g~~vAvK~l~~~~~------------~~~~~~~e~~~l~~l~H~niv~l~g 508 (710)
.|. ..+.||+|+||.||+|... ++..||||++..... ..+.+.+|+..+..++||||+++++
T Consensus 38 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 38 QWV--LGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp EEE--EEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred eEE--EEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 355 7789999999999999864 678999999986421 1234667888899999999999999
Q ss_pred EEEc----CCceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC--c
Q 005177 509 FCYN----RHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM--E 580 (710)
Q Consensus 509 ~~~~----~~~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~--~ 580 (710)
++.. .+..++||||+ +|+|.+++.. .+++.++..|+.|++.||+|||+. +|+||||||+||+++.++ .
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTTS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCCc
Confidence 9988 67899999999 9999999975 578999999999999999999998 999999999999999887 9
Q ss_pred eEEcccCccccccccCC---------CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc
Q 005177 581 PHLAEFGFKYLTQLADG---------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI 651 (710)
Q Consensus 581 ~kl~DfGla~~~~~~~~---------~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~ 651 (710)
+||+|||+++....... ....+...|.+||...+..++.++|||||||++|||+||+.||...........
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~ 271 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQ 271 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHH
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHH
Confidence 99999999976532211 111234457788988888899999999999999999999999864221111000
Q ss_pred cccccccccccccCCCcchH------HHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 652 DGLLGEMYNENEVGSSSSLQ------DEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
.......... +.... .....+.+++.+||+.||++||+++|+++.|+.+.
T Consensus 272 -~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 272 -TAKTNLLDEL----PQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp -HHHHHHHHTT----THHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred -HHHHhhcccc----cHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 0000000000 00000 12246778999999999999999999999998765
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-37 Score=345.76 Aligned_cols=246 Identities=14% Similarity=0.102 Sum_probs=194.7
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
.|. ..+.||+|+||.||+|.. .+|+.||||++.... .....+.+|++++++++|||||++++++.+++..|+|
T Consensus 185 ~f~--~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 185 TFR--QYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ceE--EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 355 678899999999999986 689999999997642 2345678899999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 520 YDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
|||+++|+|.+++.. ..++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 999999999999865 278999999999999999999999 9999999999999999999999999999865432
Q ss_pred CC-CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 596 DG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 596 ~~-~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
.. ....++..|.+||+.....++.++|||||||++|||+||+.||........ .......+.... ...+. ...
T Consensus 340 ~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~--~~~i~~~i~~~~-~~~p~---~~s 413 (576)
T 2acx_A 340 QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK--REEVERLVKEVP-EEYSE---RFS 413 (576)
T ss_dssp CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC--HHHHHHHHHHCC-CCCCT---TSC
T ss_pred ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh--HHHHHHHhhccc-ccCCc---cCC
Confidence 21 112245567888988888889999999999999999999999975432110 000111111111 11111 123
Q ss_pred HHHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRP-----SMEEALKL 701 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RP-----s~~evl~~ 701 (710)
..+.+++.+|++.||++|| +++|++++
T Consensus 414 ~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 414 PQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp HHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred HHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 4677899999999999999 78888753
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-36 Score=315.90 Aligned_cols=241 Identities=15% Similarity=0.191 Sum_probs=193.4
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
.|. ..+.||+|+||.||+|.. .++..||||.+..... ..+.+.+|++++++++||||+++++++.+++..++|
T Consensus 15 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 15 DFD--IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hce--eeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 355 678899999999999986 5788999999975422 246788999999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
|||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 93 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 169 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR 169 (284)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCB
T ss_pred EEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCccccc
Confidence 999999999999865 578899999999999999999998 999999999999999999999999999865543222
Q ss_pred CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 598 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 598 ~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
....+...+.+||......++.++||||||+++|||++|+.|+....... ....+.... ...+.. ....+
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~~~~~-~~~~~~---~~~~~ 239 (284)
T 2vgo_A 170 RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE------THRRIVNVD-LKFPPF---LSDGS 239 (284)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTTC-CCCCTT---SCHHH
T ss_pred ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH------HHHHHhccc-cCCCCc---CCHHH
Confidence 22224455778898888888999999999999999999999986432111 011111111 111111 12456
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHH
Q 005177 678 LDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
.+++.+|++.||++|||+.|+++
T Consensus 240 ~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 240 KDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHhhcCHhhCCCHHHHhh
Confidence 78899999999999999999986
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=340.44 Aligned_cols=247 Identities=17% Similarity=0.207 Sum_probs=190.6
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCcee
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 517 (710)
+.+.|. ..+.||+|+||.||+|.. .+|..||||.+.... .....+.+|++++++++|||||+++++|.+++..+
T Consensus 35 ~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 112 (494)
T 3lij_A 35 LSEMYQ--RVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYY 112 (494)
T ss_dssp HHHHEE--EEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred hhcCeE--EeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence 344566 778999999999999986 578999999998642 23567889999999999999999999999999999
Q ss_pred EEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC---CceEEcccCccccc
Q 005177 518 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN---MEPHLAEFGFKYLT 592 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~---~~~kl~DfGla~~~ 592 (710)
+|||||++|+|.+.+.. ..++.....|+.|+++||+|||+. +|+||||||+|||++.. +.+||+|||+++..
T Consensus 113 lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~ 189 (494)
T 3lij_A 113 LVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF 189 (494)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeEC
Confidence 99999999999998864 578899999999999999999998 99999999999999764 55999999999865
Q ss_pred cccCC-CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchH
Q 005177 593 QLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 671 (710)
Q Consensus 593 ~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (710)
..... ....++.+|.+||+.. ..++.++||||+||++|||++|+.||.+..... ....+.........+.+.
T Consensus 190 ~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~~~~~~~~~~ 262 (494)
T 3lij_A 190 ENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE------ILRKVEKGKYTFDSPEWK 262 (494)
T ss_dssp BTTBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTCCCCCSGGGT
T ss_pred CCCccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCCCCCCchhcc
Confidence 43221 1222455678888765 468899999999999999999999987433211 111111111011112222
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 672 DEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 672 ~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
.....+.+++.+|++.||++|||+.|+++
T Consensus 263 ~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 263 NVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 23456778999999999999999999885
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-37 Score=321.21 Aligned_cols=253 Identities=13% Similarity=0.068 Sum_probs=190.8
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCcee
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 517 (710)
.+.|. ..+.||+|+||.||+|.. .+|+.||||.+..... ..+.+.+|++++++++||||+++++++..++..+
T Consensus 33 ~~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 2h34_A 33 FGPYR--LRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY 110 (309)
T ss_dssp -CCEE--EEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred eccEE--EEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence 34455 778999999999999985 5789999999975422 2467889999999999999999999999999999
Q ss_pred EEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 518 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
+||||+++++|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 111 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 111 VDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 99999999999999975 578999999999999999999998 9999999999999999999999999998765432
Q ss_pred CCC---CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHH
Q 005177 596 DGS---FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 672 (710)
Q Consensus 596 ~~~---~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (710)
... ...+...+.+||......++.++|||||||++|||+||+.|+....... ...........+... . ..
T Consensus 188 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~--~---~~ 260 (309)
T 2h34_A 188 KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSV--MGAHINQAIPRPSTV--R---PG 260 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHH--HHHHHHSCCCCGGGT--S---TT
T ss_pred ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHH--HHHHhccCCCCcccc--C---CC
Confidence 111 1123445778888877788999999999999999999999987432110 000000000000000 0 11
Q ss_pred HHHHHHHHHhhcCCCCCCCCC-CHHHHHHHHhccCC
Q 005177 673 EIKLVLDVALLCTRSTPSDRP-SMEEALKLLSGLKP 707 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RP-s~~evl~~L~~~~~ 707 (710)
....+.+++.+||+.||++|| +++++++.|+.+-+
T Consensus 261 ~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~ 296 (309)
T 2h34_A 261 IPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALA 296 (309)
T ss_dssp CCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHH
Confidence 123566888999999999999 99999999987643
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-37 Score=321.71 Aligned_cols=249 Identities=18% Similarity=0.186 Sum_probs=193.2
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
+.+.|. ..+.||+|+||.||++.. .+|+.||||.++.... ..+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 7 ~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (304)
T 2jam_A 7 IRKTFI--FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLV 84 (304)
T ss_dssp HHHHEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhccce--eeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEE
Confidence 334565 778999999999999986 5799999999986432 356688999999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe---cCCCceEEcccCccccccc
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFKYLTQL 594 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl---~~~~~~kl~DfGla~~~~~ 594 (710)
|||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++....
T Consensus 85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 161 (304)
T 2jam_A 85 MQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN 161 (304)
T ss_dssp ECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred EEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence 999999999999864 568899999999999999999998 99999999999999 7889999999999876442
Q ss_pred cCCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 595 ADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 595 ~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
.......+...+.+||......++.++||||+||++|||+||+.|+....... ....+.........+......
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~i~~~~~~~~~~~~~~~~ 235 (304)
T 2jam_A 162 GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK------LFEKIKEGYYEFESPFWDDIS 235 (304)
T ss_dssp BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHCCCCCCTTTTTTSC
T ss_pred CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHcCCCCCCccccccCC
Confidence 21111123455778898888888999999999999999999999986432110 011111110000011111223
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..+.+++.+|++.||++|||+.|+++.
T Consensus 236 ~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 236 ESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp HHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 467789999999999999999999863
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-37 Score=323.00 Aligned_cols=251 Identities=18% Similarity=0.274 Sum_probs=193.1
Q ss_pred hhhhhcCCCCCccEEEE-----cCCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCC--ceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAV-----LPTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH--QAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~-----~~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~--~~~lv~E 521 (710)
..+.||+|+||.||++. ..+|+.||||++.... ...+.+.+|++++++++||||+++++++...+ ..++|||
T Consensus 45 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 124 (326)
T 2w1i_A 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 124 (326)
T ss_dssp EEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEEC
T ss_pred eeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEE
Confidence 67889999999999998 3578999999997643 34567899999999999999999999987654 7899999
Q ss_pred ecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-
Q 005177 522 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 597 (710)
Q Consensus 522 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~- 597 (710)
|+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 125 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~ 201 (326)
T 2w1i_A 125 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEY 201 (326)
T ss_dssp CCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSE
T ss_pred CCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhccccccc
Confidence 9999999999975 368999999999999999999998 999999999999999999999999999986543211
Q ss_pred ----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCC---------CCCccccccccccccccc-c
Q 005177 598 ----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGS---------SLQNKPIDGLLGEMYNEN-E 663 (710)
Q Consensus 598 ----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~---------~~~~~~~~~~~~~~~~~~-~ 663 (710)
....+...+.+||......++.++|||||||++|||+||+.|+.... ..........+.+..... .
T Consensus 202 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (326)
T 2w1i_A 202 YKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 281 (326)
T ss_dssp EECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCC
T ss_pred cccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCC
Confidence 11112334677888877788899999999999999999998875210 000000000000111110 0
Q ss_pred cCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 664 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 664 ~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
...+. .....+.+++.+||+.||++|||+.|+++.|+.++
T Consensus 282 ~~~~~---~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 282 LPRPD---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp CCCCT---TCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCC---cccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11111 12345778999999999999999999999998875
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-37 Score=324.34 Aligned_cols=246 Identities=16% Similarity=0.193 Sum_probs=192.7
Q ss_pred hhhhhcCCCCCccEEEEc-CC-----CcEEEEEEeeccc--hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVL-PT-----GITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~-----g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 520 (710)
..+.||+|+||.||+|.. .+ +..||||.+.... ...+.+.+|+++++++ +|||||+++++|.+++..++||
T Consensus 50 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 129 (333)
T 2i1m_A 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVIT 129 (333)
T ss_dssp EEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEE
Confidence 678899999999999985 22 3489999998643 2456788999999999 8999999999999999999999
Q ss_pred eecCCCChhhhhhc----------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEc
Q 005177 521 DYLPNGNLSEKIRT----------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 584 (710)
Q Consensus 521 Ey~~~gsL~~~l~~----------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~ 584 (710)
||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 130 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~ 206 (333)
T 2i1m_A 130 EYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIG 206 (333)
T ss_dssp ECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGGGEEEBC
T ss_pred ecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCCCeEEEC
Confidence 99999999999864 257888999999999999999998 99999999999999999999999
Q ss_pred ccCccccccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccc
Q 005177 585 EFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMY 659 (710)
Q Consensus 585 DfGla~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 659 (710)
|||+++........ ...+...|.+||......++.++|||||||++|||+| |..|+.+...... .........
T Consensus 207 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~--~~~~~~~~~ 284 (333)
T 2i1m_A 207 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK--FYKLVKDGY 284 (333)
T ss_dssp CCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH--HHHHHHHTC
T ss_pred ccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH--HHHHHhcCC
Confidence 99999865332211 1112334778888888889999999999999999999 7777764322110 000000100
Q ss_pred cccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 660 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
.. ..+.. ....+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 285 ~~---~~~~~---~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 285 QM---AQPAF---APKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp CC---CCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CC---CCCCC---CCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 00 00111 1245678999999999999999999999998763
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-37 Score=328.58 Aligned_cols=191 Identities=16% Similarity=0.199 Sum_probs=165.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.||+|+||.||+|.. .+|..||+|.+... ....+.+.+|++++++++|||||++++++.+++..++||||+++|
T Consensus 37 ~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 116 (360)
T 3eqc_A 37 KISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 116 (360)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTC
T ss_pred eeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCC
Confidence 778999999999999986 57999999999864 233567899999999999999999999999999999999999999
Q ss_pred Chhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCccccc
Q 005177 527 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIA 604 (710)
Q Consensus 527 sL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 604 (710)
+|.+++.. ..++.....++.|+++||+|||+.+ +|+||||||+||+++.++.+||+|||+++...........+..
T Consensus 117 ~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~gt~ 194 (360)
T 3eqc_A 117 SLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 194 (360)
T ss_dssp BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----CCCC
T ss_pred CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccccccCCCCCC
Confidence 99999975 5788999999999999999999832 7999999999999999999999999998754332222223445
Q ss_pred ccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCC
Q 005177 605 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNA 642 (710)
Q Consensus 605 ~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~ 642 (710)
.|.+||......++.++|||||||++|||+||+.||..
T Consensus 195 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 232 (360)
T 3eqc_A 195 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 232 (360)
T ss_dssp TTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred CeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 57888988888899999999999999999999999874
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-36 Score=321.07 Aligned_cols=249 Identities=17% Similarity=0.211 Sum_probs=190.0
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEc----CCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYN----RHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~~~lv~Ey~ 523 (710)
..+.||+|+||.||++.. .+|+.||||++.... ...+.+.+|++++++++||||+++++++.. .+..++||||+
T Consensus 33 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~ 112 (317)
T 2buj_A 33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFF 112 (317)
T ss_dssp EEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECC
T ss_pred EEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeC
Confidence 778999999999999985 789999999987543 346778899999999999999999999973 34789999999
Q ss_pred CCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 524 PNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 524 ~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
++|+|.+++.. .+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 113 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~ 189 (317)
T 2buj_A 113 KRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVE 189 (317)
T ss_dssp TTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEE
T ss_pred CCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhcccccc
Confidence 99999999864 468999999999999999999999 999999999999999999999999998765421110
Q ss_pred C-----------CcccccccCchhhhhcc---CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccc
Q 005177 598 S-----------FPAKIAWTESGEFYNAM---KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENE 663 (710)
Q Consensus 598 ~-----------~~~~~~~~~~~e~~~~~---~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 663 (710)
. ...+...|.+||..... .++.++|||||||++|||++|+.|+............ .... ...
T Consensus 190 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~-~~~~---~~~ 265 (317)
T 2buj_A 190 GSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVAL-AVQN---QLS 265 (317)
T ss_dssp SHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHH-HHHC---C--
T ss_pred cccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhH-Hhhc---cCC
Confidence 0 00123446777876543 3678999999999999999999998521100000000 0000 000
Q ss_pred cCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCCC
Q 005177 664 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 708 (710)
Q Consensus 664 ~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~ 708 (710)
..... .....+.+++.+||+.||++|||+.|+++.|+.+++.
T Consensus 266 ~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 266 IPQSP---RHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp CCCCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred CCccc---cCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 11011 1224577899999999999999999999999998753
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-36 Score=311.40 Aligned_cols=246 Identities=16% Similarity=0.175 Sum_probs=192.4
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 520 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||.+.... ...+.+.+|++++++++||||+++++++.+++..++||
T Consensus 7 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 7 EDWD--LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHEE--EEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceE--EEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 4455 678899999999999986 579999999997543 23577889999999999999999999999999999999
Q ss_pred eecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC--
Q 005177 521 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD-- 596 (710)
Q Consensus 521 Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~-- 596 (710)
||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 85 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 85 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp ECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred EecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 99999999999975 578899999999999999999998 99999999999999999999999999987643211
Q ss_pred --CCCcccccccCchhhhhccCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 597 --GSFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 597 --~~~~~~~~~~~~~e~~~~~~~-~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
.....+...+.+||......+ +.++|||||||++|||+||+.|+........ .. ....... .. .......
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~----~~~~~~~-~~-~~~~~~~ 234 (276)
T 2yex_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EY----SDWKEKK-TY-LNPWKKI 234 (276)
T ss_dssp CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH-HH----HHHHTTC-TT-STTGGGS
T ss_pred hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH-HH----HHhhhcc-cc-cCchhhc
Confidence 111123344677887766554 7789999999999999999999874332111 00 0010000 00 0111122
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
...+.+++.+|++.||++|||+.|+++.
T Consensus 235 ~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 235 DSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 3456789999999999999999999864
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=341.70 Aligned_cols=248 Identities=17% Similarity=0.201 Sum_probs=192.6
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--------------hhHHHHHHHHHHHhccCCCCceeE
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--------------TRIKIVSEFITRIGTVRHKNLIRL 506 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--------------~~~~~~~~e~~~l~~l~H~niv~l 506 (710)
+.+.|. ..+.||+|+||.||+|.. .+|..||||.+.... ...+.+.+|++++++++|||||++
T Consensus 34 i~~~Y~--~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~ 111 (504)
T 3q5i_A 34 IGESYF--KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKL 111 (504)
T ss_dssp GGGTEE--EEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCE
T ss_pred cccceE--EEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence 445566 788999999999999986 578899999997632 124678899999999999999999
Q ss_pred EEEEEcCCceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC---ce
Q 005177 507 LGFCYNRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM---EP 581 (710)
Q Consensus 507 ~g~~~~~~~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~---~~ 581 (710)
+++|.+++..++|||||++|+|.+++.. .+++..+..|+.|++.||+|||+. +|+||||||+|||++.++ .+
T Consensus 112 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~ 188 (504)
T 3q5i_A 112 FDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNI 188 (504)
T ss_dssp EEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSE
T ss_pred EEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccE
Confidence 9999999999999999999999998864 678999999999999999999998 999999999999999775 69
Q ss_pred EEcccCccccccccCC-CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccc
Q 005177 582 HLAEFGFKYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYN 660 (710)
Q Consensus 582 kl~DfGla~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~ 660 (710)
||+|||+++....... ....++++|.+||... ..++.++||||+||++|||++|+.||.+..... ....+..
T Consensus 189 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~ 261 (504)
T 3q5i_A 189 KIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD------IIKKVEK 261 (504)
T ss_dssp EECCCTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHH
T ss_pred EEEECCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHc
Confidence 9999999986543221 1222455678888766 468899999999999999999999987433211 1111111
Q ss_pred ccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 661 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.......+.+......+.+++.+|++.||++|||++|++++
T Consensus 262 ~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 262 GKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp CCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 11000011112233567889999999999999999999863
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-36 Score=319.04 Aligned_cols=253 Identities=17% Similarity=0.209 Sum_probs=186.0
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
.+.|. ..+.||+|+||.||+|.. .+|+.||||+++.... ..+.+.+|++++++++|||||++++++.+++..++
T Consensus 33 ~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 33 IDRYR--RITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp GGGEE--EEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhEE--EEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 44566 788999999999999984 6899999999975432 24567789999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec-----CCCceEEcccCcccc
Q 005177 519 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-----ENMEPHLAEFGFKYL 591 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~-----~~~~~kl~DfGla~~ 591 (710)
||||++ |+|.+++.. ..++..+..|+.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+++.
T Consensus 111 v~e~~~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp EEECCS-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred EEecCC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 999998 599999875 578889999999999999999998 999999999999994 455699999999976
Q ss_pred ccccCCC--CcccccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCc---------------ccccc
Q 005177 592 TQLADGS--FPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPIDG 653 (710)
Q Consensus 592 ~~~~~~~--~~~~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~---------------~~~~~ 653 (710)
....... ...+...|.+||..... .++.++|||||||++|||+||+.|+........ |....
T Consensus 187 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (329)
T 3gbz_A 187 FGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVT 266 (329)
T ss_dssp HC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred cCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhh
Confidence 5422111 11234557788887654 479999999999999999999999874332110 00000
Q ss_pred cccccccccccCCCcchHH-----HHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 654 LLGEMYNENEVGSSSSLQD-----EIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.........+......... ....+.+++.+|++.||++|||+.|++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 267 ALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp GSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 0000000000000111111 12467799999999999999999999873
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=321.41 Aligned_cols=249 Identities=15% Similarity=0.177 Sum_probs=190.3
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc------CCCcEEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCc
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL------PTGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ 515 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 515 (710)
+.|. ..+.||+|+||.||+|.. .+|..||||.+... ......+.+|+.++++++||||+++++++.+.+.
T Consensus 30 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 30 KNIT--LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp GGCE--EEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hheE--EEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 3455 778999999999999984 45779999999753 2345678899999999999999999999999999
Q ss_pred eeEEEeecCCCChhhhhhc---------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC---CCceEE
Q 005177 516 AYLLYDYLPNGNLSEKIRT---------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHL 583 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~---------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~---~~~~kl 583 (710)
.++||||+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEE
Confidence 9999999999999999975 267889999999999999999998 9999999999999994 446999
Q ss_pred cccCccccccccCC----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccc
Q 005177 584 AEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEM 658 (710)
Q Consensus 584 ~DfGla~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~ 658 (710)
+|||+++....... ....+...|.+||......++.++|||||||++|||+| |+.|+...... . ....+
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~-----~~~~~ 258 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-E-----VLEFV 258 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-H-----HHHHH
T ss_pred CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH-H-----HHHHH
Confidence 99999875432211 11112344778888888889999999999999999999 77777543211 0 01111
Q ss_pred ccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 659 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
........+. .....+.+++.+||+.||++||++.|+++.|+.+.
T Consensus 259 ~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 259 TSGGRMDPPK---NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp HTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hcCCCCCCCC---CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence 1111011111 11245678899999999999999999999998764
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-37 Score=317.89 Aligned_cols=253 Identities=10% Similarity=0.041 Sum_probs=191.8
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEE-EcCCceeEEEe
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFC-YNRHQAYLLYD 521 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~-~~~~~~~lv~E 521 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||.+.... ..+.+.+|++++.+++|++++..++++ .+++..++|||
T Consensus 9 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 4hgt_A 9 NRYR--LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp --CE--EEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CceE--EeeeecCCCCeEEEEEEEcCCCceEEEEeecccc-cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence 4455 778999999999999985 789999999876533 234578899999999999888877766 55677899999
Q ss_pred ecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe---cCCCceEEcccCcccccccc
Q 005177 522 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 522 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl---~~~~~~kl~DfGla~~~~~~ 595 (710)
|+ +|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||+++.....
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 161 (296)
T 4hgt_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred cc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceeccCc
Confidence 99 8999999863 578999999999999999999999 99999999999999 78899999999999865432
Q ss_pred CC---------CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCC
Q 005177 596 DG---------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS 666 (710)
Q Consensus 596 ~~---------~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (710)
.. ....+...+.+||......++.++|||||||++|||+||+.||........... ...+........
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~ 238 (296)
T 4hgt_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK---YERISEKKMSTP 238 (296)
T ss_dssp TTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSH---HHHHHHHHHHSC
T ss_pred ccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhh---hhhhhcccccch
Confidence 21 111234457788988888899999999999999999999999975332211100 011100000000
Q ss_pred Cc-chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 667 SS-SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 667 ~~-~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
.. ........+.+++.+|++.||++|||++|+++.|+++.
T Consensus 239 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~ 279 (296)
T 4hgt_A 239 IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred hhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence 00 00111246778999999999999999999999998763
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=336.90 Aligned_cols=187 Identities=17% Similarity=0.257 Sum_probs=148.0
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcC-----C
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR-----H 514 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-----~ 514 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|++++++++|||||++++++... +
T Consensus 53 ~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 53 DRYE--IRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp TTEE--ECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred CCeE--EeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 3455 778999999999999985 57999999999753 23456788999999999999999999999543 5
Q ss_pred ceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccc
Q 005177 515 QAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 592 (710)
Q Consensus 515 ~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~ 592 (710)
..|+||||+. |+|.+++.. .+++.....++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 131 ~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 131 ELYVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp CEEEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred eEEEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 6899999985 799999876 468899999999999999999998 9999999999999999999999999999865
Q ss_pred cccCC-----------------------------CCcccccccCchhhh-hccCCccccceeeHHHHHHHHHhC
Q 005177 593 QLADG-----------------------------SFPAKIAWTESGEFY-NAMKEEMYMDVYGFGEIILEILTN 636 (710)
Q Consensus 593 ~~~~~-----------------------------~~~~~~~~~~~~e~~-~~~~~~~~~DVySfGvvl~Elltg 636 (710)
..... ....++.+|.+||+. ....++.++|||||||++|||+||
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 32110 001135668888965 456789999999999999999994
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=340.34 Aligned_cols=242 Identities=13% Similarity=0.105 Sum_probs=192.1
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++++++|||||++++++.+.+..|+||||++
T Consensus 189 ~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~ 268 (543)
T 3c4z_A 189 DFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMN 268 (543)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEecc
Confidence 667899999999999986 5799999999976432 24568889999999999999999999999999999999999
Q ss_pred CCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC
Q 005177 525 NGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 598 (710)
Q Consensus 525 ~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 598 (710)
+|+|.+++.. ..++.....++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 269 gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~ 345 (543)
T 3c4z_A 269 GGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345 (543)
T ss_dssp TCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCC
T ss_pred CCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccCCCcc
Confidence 9999999864 367888999999999999999998 9999999999999999999999999999865432221
Q ss_pred --CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHH
Q 005177 599 --FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 676 (710)
Q Consensus 599 --~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (710)
...++..|.+||+..+..++.++|||||||++|||+||+.||........ .......+.... ...+. .....
T Consensus 346 ~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~--~~~~~~~i~~~~-~~~p~---~~s~~ 419 (543)
T 3c4z_A 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE--NKELKQRVLEQA-VTYPD---KFSPA 419 (543)
T ss_dssp BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC--HHHHHHHHHHCC-CCCCT---TSCHH
T ss_pred cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh--HHHHHHHHhhcc-cCCCc---ccCHH
Confidence 11345668889998888899999999999999999999999975432111 011111111111 11111 12345
Q ss_pred HHHHHhhcCCCCCCCCCCH-----HHHHH
Q 005177 677 VLDVALLCTRSTPSDRPSM-----EEALK 700 (710)
Q Consensus 677 ~~~l~~~Cl~~~p~~RPs~-----~evl~ 700 (710)
+.+++.+|++.||++||++ +|+.+
T Consensus 420 ~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 420 SKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp HHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred HHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 6788899999999999975 56653
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-36 Score=325.25 Aligned_cols=237 Identities=10% Similarity=0.049 Sum_probs=185.4
Q ss_pred hhhhhcCCCCCccEEEE------cCCCcEEEEEEeeccchhHHHHHHHHHHHhccC---CCCceeEEEEEEcCCceeEEE
Q 005177 450 ECEEAARPQSAAGCKAV------LPTGITVSVKKIEWGATRIKIVSEFITRIGTVR---HKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~------~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~---H~niv~l~g~~~~~~~~~lv~ 520 (710)
..+.||+|+||.||+|. ..+++.||||+++... ...+..|++++.+++ |+||+++++++..++..++||
T Consensus 69 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~ 146 (365)
T 3e7e_A 69 VHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN--PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVG 146 (365)
T ss_dssp EEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC--HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEE
T ss_pred EEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC--hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEE
Confidence 67889999999999994 4678999999997543 445667777777766 999999999999999999999
Q ss_pred eecCCCChhhhhhc-------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC-----------CCceE
Q 005177 521 DYLPNGNLSEKIRT-------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-----------NMEPH 582 (710)
Q Consensus 521 Ey~~~gsL~~~l~~-------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~-----------~~~~k 582 (710)
|||++|+|.+++.. .++|..+..|+.|+++||+|||+. +|+||||||+|||++. ++.+|
T Consensus 147 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~k 223 (365)
T 3e7e_A 147 ELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDLSAGLA 223 (365)
T ss_dssp CCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC------CTTEE
T ss_pred eccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccccccccCCEE
Confidence 99999999999962 578999999999999999999998 9999999999999998 89999
Q ss_pred EcccCccccccccCC----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccc
Q 005177 583 LAEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEM 658 (710)
Q Consensus 583 l~DfGla~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~ 658 (710)
|+|||+++....... ....++.+|.+||+..+..++.++|||||||++|||+||+.|+...... .+.. ...
T Consensus 224 l~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~~~----~~~ 298 (365)
T 3e7e_A 224 LIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG-ECKP----EGL 298 (365)
T ss_dssp ECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT-EEEE----CSC
T ss_pred EeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC-ceee----chh
Confidence 999999975432111 1122455688889988888999999999999999999999998633211 1110 111
Q ss_pred ccccccCCCcchHHHHHHHHHHHhhcCCCCCCCC-CCHHHHHHHHhcc
Q 005177 659 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDR-PSMEEALKLLSGL 705 (710)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~R-Ps~~evl~~L~~~ 705 (710)
... .. .. ....+++..|++.+|.+| |+++++.+.|+++
T Consensus 299 ~~~-----~~-~~---~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~ 337 (365)
T 3e7e_A 299 FRR-----LP-HL---DMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKV 337 (365)
T ss_dssp CTT-----CS-SH---HHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHH
T ss_pred ccc-----cC-cH---HHHHHHHHHHcCCCCCCcchHHHHHHHHHHHH
Confidence 111 11 12 234466778999999999 5788877777654
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-37 Score=342.13 Aligned_cols=247 Identities=17% Similarity=0.201 Sum_probs=195.4
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCcee
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 517 (710)
.+.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+.+..+
T Consensus 25 ~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 102 (484)
T 3nyv_A 25 SDRYK--GQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFY 102 (484)
T ss_dssp HHHEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred cCceE--EeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 34465 778999999999999986 589999999997532 23677899999999999999999999999999999
Q ss_pred EEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe---cCCCceEEcccCccccc
Q 005177 518 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFKYLT 592 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl---~~~~~~kl~DfGla~~~ 592 (710)
+||||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+|||+ +.++.+||+|||+++..
T Consensus 103 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 103 LVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp EEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred EEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 99999999999999865 568889999999999999999999 99999999999999 46789999999999765
Q ss_pred cccCCC-CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchH
Q 005177 593 QLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 671 (710)
Q Consensus 593 ~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (710)
...... ...++++|.+||...+ .++.++||||+||++|||++|+.||.+..... ....+.........+.+.
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~~~~~~~~~~ 252 (484)
T 3nyv_A 180 EASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD------ILKKVEKGKYTFELPQWK 252 (484)
T ss_dssp CCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCCCCCCSGGGG
T ss_pred ccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHcCCCCCCCcccc
Confidence 432111 1124556788888765 68899999999999999999999987433211 111111111011112222
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 672 DEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 672 ~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.....+.+++.+|++.||++|||+.|++++
T Consensus 253 ~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 253 KVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp GSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 334567789999999999999999999863
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=321.26 Aligned_cols=246 Identities=14% Similarity=0.145 Sum_probs=188.9
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccC-CCCceeEEEEEEc--CCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR-HKNLIRLLGFCYN--RHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~--~~~~~lv~Ey~~~ 525 (710)
..+.||+|+||.||+|.. .+|+.||||.++.. ..+.+.+|++++++++ ||||+++++++.+ ....++||||+++
T Consensus 40 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 117 (330)
T 3nsz_A 40 LVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNN 117 (330)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCC
T ss_pred EEEEecccCCeEEEEEEECCCCcEEEEEEeccc--chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCc
Confidence 778999999999999984 78999999999743 3567889999999998 9999999999988 5678999999999
Q ss_pred CChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC-ceEEcccCccccccccCC-CCcccc
Q 005177 526 GNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM-EPHLAEFGFKYLTQLADG-SFPAKI 603 (710)
Q Consensus 526 gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~-~~kl~DfGla~~~~~~~~-~~~~~~ 603 (710)
++|.+++. ..++.....++.|+++||+|||+. +|+||||||+|||++.++ .+||+|||+++....... ....+.
T Consensus 118 ~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 193 (330)
T 3nsz_A 118 TDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVAS 193 (330)
T ss_dssp CCHHHHGG-GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSC
T ss_pred hhHHHHHH-hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCcccccccc
Confidence 99999986 488889999999999999999998 999999999999999776 899999999986543222 122244
Q ss_pred cccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc--c-----cccccccc--------------
Q 005177 604 AWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID--G-----LLGEMYNE-------------- 661 (710)
Q Consensus 604 ~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~--~-----~~~~~~~~-------------- 661 (710)
.++.+||.... ..++.++||||+||++|||+||+.|+..+......... . ...+..+.
T Consensus 194 ~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (330)
T 3nsz_A 194 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILG 273 (330)
T ss_dssp GGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHC
T ss_pred ccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhh
Confidence 45777887665 66889999999999999999999998644321110000 0 00000000
Q ss_pred -----cc--cCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 662 -----NE--VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 662 -----~~--~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+ .............+.+++.+|++.||++|||++|++++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 274 RHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp CCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred hccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00 00000011123567899999999999999999999874
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=321.96 Aligned_cols=241 Identities=17% Similarity=0.151 Sum_probs=188.5
Q ss_pred hhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccC-CCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 452 EEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
+.||+|+||.||+|.. .+|+.||||.++.... ....+.+|++++.+++ ||||+++++++.+.+..++||||+++|
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~ 114 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG 114 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCC
Confidence 7899999999999985 5799999999986432 3567889999999885 699999999999999999999999999
Q ss_pred Chhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC---CCceEEcccCccccccccCCC-
Q 005177 527 NLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLAEFGFKYLTQLADGS- 598 (710)
Q Consensus 527 sL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~---~~~~kl~DfGla~~~~~~~~~- 598 (710)
+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++........
T Consensus 115 ~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~ 191 (327)
T 3lm5_A 115 EIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELR 191 (327)
T ss_dssp EGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-------
T ss_pred cHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeCccccccCCccccc
Confidence 99999854 468999999999999999999998 9999999999999998 789999999999865432211
Q ss_pred CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHH
Q 005177 599 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 678 (710)
Q Consensus 599 ~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (710)
...+...|.+||......++.++|||||||++|||+||+.|+........ . ..+..................+.
T Consensus 192 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~----~~i~~~~~~~~~~~~~~~~~~~~ 265 (327)
T 3lm5_A 192 EIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET--Y----LNISQVNVDYSEETFSSVSQLAT 265 (327)
T ss_dssp --CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--H----HHHHHTCCCCCTTTTTTSCHHHH
T ss_pred cccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH--H----HHHHhcccccCchhhcccCHHHH
Confidence 12244557888988888899999999999999999999999864332110 0 00000000000111112234577
Q ss_pred HHHhhcCCCCCCCCCCHHHHHHH
Q 005177 679 DVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 679 ~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+++.+|++.||++|||++|+++.
T Consensus 266 ~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 266 DFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp HHHHHHSCSSGGGSCCHHHHTTC
T ss_pred HHHHHHcCCChhhCcCHHHHhCC
Confidence 89999999999999999999864
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-37 Score=317.83 Aligned_cols=253 Identities=10% Similarity=0.039 Sum_probs=193.6
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEE-EcCCceeEEEe
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFC-YNRHQAYLLYD 521 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~-~~~~~~~lv~E 521 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||.+.... ..+.+.+|++++++++|++++..++++ .+++..++|||
T Consensus 9 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 9 NRYR--LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTEE--EEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS-SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred cEEE--EEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 3455 778999999999999985 789999999987543 345688999999999999888777766 45667899999
Q ss_pred ecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe---cCCCceEEcccCcccccccc
Q 005177 522 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 522 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl---~~~~~~kl~DfGla~~~~~~ 595 (710)
|+ +|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||+++.....
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 99 8999999863 578999999999999999999999 99999999999999 47899999999999865432
Q ss_pred CC---------CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCC
Q 005177 596 DG---------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS 666 (710)
Q Consensus 596 ~~---------~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (710)
.. ....+...|.+||......++.++|||||||++|||+||+.|+........... ...+........
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~ 238 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK---YERISEKKMSTP 238 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSH---HHHHHHHHHHSC
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhh---hhhhcccccCCc
Confidence 21 111244457788988888899999999999999999999999875332111000 011100000000
Q ss_pred C-cchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 667 S-SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 667 ~-~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
. .........+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 239 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 279 (296)
T 3uzp_A 239 IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHH
Confidence 0 000111245778999999999999999999999998763
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-36 Score=313.33 Aligned_cols=242 Identities=16% Similarity=0.162 Sum_probs=185.7
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
...+||+|+||.||+|.. .++..||||.+.... ...+.+.+|++++++++|||||++++++.+.+..++||||+++|+
T Consensus 26 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 105 (295)
T 2clq_A 26 DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGS 105 (295)
T ss_dssp SBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEE
T ss_pred CcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCC
Confidence 445899999999999985 678999999998643 235678899999999999999999999999999999999999999
Q ss_pred hhhhhhcC-----CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC-CCceEEcccCccccccccCC--CC
Q 005177 528 LSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-NMEPHLAEFGFKYLTQLADG--SF 599 (710)
Q Consensus 528 L~~~l~~~-----~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~-~~~~kl~DfGla~~~~~~~~--~~ 599 (710)
|.+++... .++.....++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++....... ..
T Consensus 106 L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 182 (295)
T 2clq_A 106 LSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET 182 (295)
T ss_dssp HHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CC
T ss_pred HHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccc
Confidence 99999752 35788889999999999999998 9999999999999997 89999999999876542211 11
Q ss_pred cccccccCchhhhhcc--CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAM--KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~--~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
..+...+.+||..... .++.++|||||||++|||+||+.|+............. ...... ...+. .....+
T Consensus 183 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~---~~~~~~-~~~~~---~~~~~~ 255 (295)
T 2clq_A 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV---GMFKVH-PEIPE---SMSAEA 255 (295)
T ss_dssp CCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHH---HHHCCC-CCCCT---TSCHHH
T ss_pred cCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhh---cccccc-ccccc---cCCHHH
Confidence 1234446777876553 37889999999999999999999986432211000000 000000 00011 122456
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 678 LDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+++.+||+.||++|||+.|+++.
T Consensus 256 ~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 256 KAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp HHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHccCChhhCCCHHHHhcC
Confidence 788999999999999999999863
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-37 Score=331.35 Aligned_cols=252 Identities=14% Similarity=0.081 Sum_probs=191.5
Q ss_pred hcCCchhhhhhcCCCCCccEEEEcC---------CCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCcee---------
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVLP---------TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIR--------- 505 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~~---------~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~--------- 505 (710)
+.|. ..+.||+|+||.||+|... +++.||||.+... +.+.+|++++++++|||||+
T Consensus 42 ~~y~--~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 42 RQWK--LKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp CEEE--EEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CeEE--EEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3455 7789999999999999864 4889999999854 46788999999999999998
Q ss_pred ------EEEEEEc-CCceeEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeE
Q 005177 506 ------LLGFCYN-RHQAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIV 574 (710)
Q Consensus 506 ------l~g~~~~-~~~~~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiL 574 (710)
+++++.. ++..++||||+ +|+|.+++.. .+++..+..|+.|+++||+|||+. +|+||||||+||+
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl 191 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIF 191 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEE
Confidence 6788876 67889999999 9999999975 478999999999999999999999 9999999999999
Q ss_pred ecCCC--ceEEcccCccccccccCC---------CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCC
Q 005177 575 FDENM--EPHLAEFGFKYLTQLADG---------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAG 643 (710)
Q Consensus 575 l~~~~--~~kl~DfGla~~~~~~~~---------~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~ 643 (710)
++.++ .+||+|||+++....... ....+...|.+||......++.++|||||||++|||+||+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 899999999976543211 1112344577889888888999999999999999999999998754
Q ss_pred CCCCccccccccccccccc-cc-CCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 644 SSLQNKPIDGLLGEMYNEN-EV-GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
......... ......... .. ............+.+++.+||+.||++|||++|+++.|+++.
T Consensus 272 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 335 (352)
T 2jii_A 272 LPNTEDIMK-QKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALL 335 (352)
T ss_dssp TTCHHHHHH-HHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred CcCHHHHHH-HHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHH
Confidence 311111100 000000000 00 000000011245778899999999999999999999998763
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-37 Score=329.42 Aligned_cols=248 Identities=15% Similarity=0.105 Sum_probs=190.2
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc----CCCcEEEEEEeeccc-----hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcC
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL----PTGITVSVKKIEWGA-----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNR 513 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~----~~g~~vAvK~l~~~~-----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~ 513 (710)
+.|. ..+.||+|+||.||++.. .+|+.||||+++... ...+.+.+|++++.++ .||||+++++++.++
T Consensus 54 ~~y~--~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 131 (355)
T 1vzo_A 54 ENFE--LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE 131 (355)
T ss_dssp GGEE--EEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred cceE--EEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeC
Confidence 3455 778999999999999986 478999999997532 2345677889999999 599999999999999
Q ss_pred CceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 514 HQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 514 ~~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
+..++||||+++|+|.+++.. .+++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 132 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 132 TKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp TEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred ceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 999999999999999999975 578889999999999999999998 999999999999999999999999999976
Q ss_pred ccccCC---CCcccccccCchhhhhc--cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCC
Q 005177 592 TQLADG---SFPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS 666 (710)
Q Consensus 592 ~~~~~~---~~~~~~~~~~~~e~~~~--~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (710)
...... ....++..|.+||+... ..++.++|||||||++|||+||+.|+........ .......+.... ...
T Consensus 209 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~~~-~~~ 285 (355)
T 1vzo_A 209 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS--QAEISRRILKSE-PPY 285 (355)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC--HHHHHHHHHHCC-CCC
T ss_pred cccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch--HHHHHHHHhccC-CCC
Confidence 432111 11123455778888764 3478899999999999999999999874332111 001111111111 111
Q ss_pred CcchHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHHHH
Q 005177 667 SSSLQDEIKLVLDVALLCTRSTPSDRP-----SMEEALKLL 702 (710)
Q Consensus 667 ~~~~~~~~~~~~~l~~~Cl~~~p~~RP-----s~~evl~~L 702 (710)
+. +....+.+++.+||+.||++|| +++|+++..
T Consensus 286 ~~---~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 286 PQ---EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp CT---TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred Cc---ccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 11 1224567899999999999999 999998753
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=315.82 Aligned_cols=243 Identities=14% Similarity=0.169 Sum_probs=193.7
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
+.|. ..+.||+|+||.||++.. .+|+.||+|.+.... ...+.+.+|++++++++||||+++++++.+++..++
T Consensus 15 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (294)
T 2rku_A 15 RRYV--RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 92 (294)
T ss_dssp EEEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cceE--EEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence 3455 778999999999999986 568899999997542 245678899999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC
Q 005177 519 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 596 (710)
||||+++++|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 93 v~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 93 VLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp EEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 9999999999998865 578999999999999999999998 99999999999999999999999999987654221
Q ss_pred CC--CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 597 GS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 597 ~~--~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
.. ...+...+.+||......++.++||||||+++|||+||+.|+........ ...+.... ...+.. ..
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~------~~~~~~~~-~~~~~~---~~ 239 (294)
T 2rku_A 170 ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET------YLRIKKNE-YSIPKH---IN 239 (294)
T ss_dssp CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH------HHHHHTTC-CCCCTT---SC
T ss_pred cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHhhcc-CCCccc---cC
Confidence 11 12234457788888887889999999999999999999999864321110 01111111 111111 12
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..+.+++.+|++.||++|||++|+++.
T Consensus 240 ~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 240 PVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp HHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred HHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 356688899999999999999999864
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-35 Score=349.29 Aligned_cols=318 Identities=21% Similarity=0.222 Sum_probs=285.7
Q ss_pred EcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCC-ChhhcCCCCCCEEECCCC
Q 005177 81 NLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHF-PGGIQSLRNLLVLDAFSN 159 (710)
Q Consensus 81 ~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~l~~L~~L~~L~L~~N 159 (710)
+.++++++. +|. + .+.|++|||++|.+++..|..|.++++|++|+|++|.+.+.+ |..|+++++|++|+|++|
T Consensus 10 dcs~~~L~~-vP~-l----p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N 83 (844)
T 3j0a_A 10 FYRFCNLTQ-VPQ-V----LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSS 83 (844)
T ss_dssp EESCCCSSC-CCS-S----CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTC
T ss_pred EccCCCCCC-CCC-C----CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCC
Confidence 334455553 343 2 568999999999999999999999999999999999777666 788999999999999999
Q ss_pred CCCcCCchhccCCCCCCEEEccCCCCCCCCCcc--cCCCCCCCeEEecCCcCCCCCc-cccccccccccccccccccccc
Q 005177 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQ--FGSFKSLEFLHLAGNLLNDQIP-AELGMLKTVTHMEIGYNFYQGN 236 (710)
Q Consensus 160 ~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~l~~n~~~g~ 236 (710)
.+++..|..|.++++|++|+|++|.+++.+|.. |+++++|++|+|++|.+++..| ..++++++|++|++++|.+++.
T Consensus 84 ~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~ 163 (844)
T 3j0a_A 84 KIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLV 163 (844)
T ss_dssp CCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCC
T ss_pred cCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCee
Confidence 999999999999999999999999999877765 9999999999999999988765 5799999999999999999999
Q ss_pred CCccccCC--CccchhccccccCCccCchhccCCCC------CcEEEccccccCCCCCccccC-----------------
Q 005177 237 IPWQLGNM--SEVQYLDIAGANLSGSIPKELSNLTK------LESLFLFRNQLAGQVPWEFSR----------------- 291 (710)
Q Consensus 237 ~p~~l~~l--~~L~~L~ls~n~l~g~~p~~l~~l~~------L~~L~L~~n~l~~~~p~~~~~----------------- 291 (710)
.|..+..+ ++|+.|++++|.+.+..|..+..+++ |+.|++++|.+++..|..+..
T Consensus 164 ~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~ 243 (844)
T 3j0a_A 164 CEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIM 243 (844)
T ss_dssp CSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCC
T ss_pred CHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccc
Confidence 99988887 89999999999999998887777665 999999999988776654432
Q ss_pred ---------------------CCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccC
Q 005177 292 ---------------------VTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWN 350 (710)
Q Consensus 292 ---------------------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 350 (710)
.++|+.|++++|.+.+..|..|..+++|+.|+|++|++++..|..+..+++|++|+|++
T Consensus 244 ~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~ 323 (844)
T 3j0a_A 244 GAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSY 323 (844)
T ss_dssp BCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEES
T ss_pred cccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCC
Confidence 26799999999999998999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecccCCcccc
Q 005177 351 NYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGI 404 (710)
Q Consensus 351 N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~l~g~ 404 (710)
|.+++..|..+..+++|+.|++++|.+++..|..+..+++|+.|++++|.+++.
T Consensus 324 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i 377 (844)
T 3j0a_A 324 NLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI 377 (844)
T ss_dssp CCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC
T ss_pred CCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc
Confidence 999988899999999999999999999887777888999999999999998863
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=326.07 Aligned_cols=251 Identities=21% Similarity=0.276 Sum_probs=185.9
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcCC-----
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----- 514 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----- 514 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|++++++++|||||++++++...+
T Consensus 25 ~~y~--~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 25 AVYR--DLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp SSEE--EEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred ceEE--EeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 4455 778999999999999985 67999999999653 223567889999999999999999999998753
Q ss_pred -ceeEEEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccc
Q 005177 515 -QAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 592 (710)
Q Consensus 515 -~~~lv~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~ 592 (710)
..|+||||+ +++|.+++.. .+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 178 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQA 178 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred ceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence 469999999 7899999875 578889999999999999999998 9999999999999999999999999999875
Q ss_pred cccCCCCcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc---------cccccc-----
Q 005177 593 QLADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI---------DGLLGE----- 657 (710)
Q Consensus 593 ~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~---------~~~~~~----- 657 (710)
...... ..++.+|.+||.... ..++.++||||+||++|||++|+.||.+......... ......
T Consensus 179 ~~~~~~-~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~ 257 (367)
T 1cm8_A 179 DSEMTG-YVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDE 257 (367)
T ss_dssp CSSCCS-SCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHH
T ss_pred ccccCc-CcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHH
Confidence 433222 224556788887765 6789999999999999999999999875432110000 000000
Q ss_pred ---ccc---cc-ccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 658 ---MYN---EN-EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 658 ---~~~---~~-~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
... .. ..............+.+++.+|++.||++|||+.|++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 258 AKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 000 00 000000011223567889999999999999999999874
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-37 Score=323.80 Aligned_cols=248 Identities=17% Similarity=0.233 Sum_probs=183.4
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchh--HHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATR--IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~--~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.||+|+||.||+|.. .+|+.||||+++..... ...+.+|++++++++|||||++++++.+++..++||||++ |
T Consensus 6 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 84 (324)
T 3mtl_A 6 KLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-K 84 (324)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-E
T ss_pred EEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-c
Confidence 678899999999999986 57999999999754322 2245578999999999999999999999999999999998 5
Q ss_pred Chhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC--cc
Q 005177 527 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF--PA 601 (710)
Q Consensus 527 sL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~--~~ 601 (710)
+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......... ..
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 161 (324)
T 3mtl_A 85 DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEV 161 (324)
T ss_dssp EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC-----------
T ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCcccccccc
Confidence 99988865 468889999999999999999998 99999999999999999999999999987654222111 12
Q ss_pred cccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc---------cccccccccc------cccC
Q 005177 602 KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI---------DGLLGEMYNE------NEVG 665 (710)
Q Consensus 602 ~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~---------~~~~~~~~~~------~~~~ 665 (710)
+..+|.+||...+ ..++.++||||+||++|||+||+.||.+......... .......... ....
T Consensus 162 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (324)
T 3mtl_A 162 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPK 241 (324)
T ss_dssp -CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCC
T ss_pred CcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhccccccc
Confidence 3455778887665 5678999999999999999999999874321110000 0000000000 0000
Q ss_pred -CCcc----hHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 666 -SSSS----LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 666 -~~~~----~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.... .......+.+++.+|++.||++|||++|+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 242 YRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp CCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0000 01123457799999999999999999999873
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-37 Score=316.50 Aligned_cols=248 Identities=17% Similarity=0.184 Sum_probs=189.9
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEc--CCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~lv~Ey~ 523 (710)
..+.||+|+||.||++.. .+|+.||+|.+.... ...+.+.+|++++++++||||+++++++.+ ++..++||||+
T Consensus 10 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~ 89 (279)
T 2w5a_A 10 VLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89 (279)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECC
T ss_pred eehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCC
Confidence 678899999999999986 579999999998642 345678899999999999999999998864 56889999999
Q ss_pred CCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCC--CCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 524 PNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDC--YPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 524 ~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~--~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
++|+|.+++.. ..++..+..++.|+++||+|||+.. ..+|+||||||+||+++.++.+||+|||+++.....
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~ 169 (279)
T 2w5a_A 90 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169 (279)
T ss_dssp TTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---
T ss_pred CCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeeccc
Confidence 99999999964 2789999999999999999999981 012999999999999999999999999998765422
Q ss_pred CCC--CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 596 DGS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 596 ~~~--~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
... ...+...+.+||......++.++|||||||++|||+||+.|+....... ....+........+. ..
T Consensus 170 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~i~~~~~~~~~~---~~ 240 (279)
T 2w5a_A 170 TSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE------LAGKIREGKFRRIPY---RY 240 (279)
T ss_dssp CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTCCCCCCT---TS
T ss_pred cccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHH------HHHHHhhcccccCCc---cc
Confidence 110 0113344778888888788999999999999999999999986432110 011111111001111 12
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
...+.+++.+||+.||++|||+.|+++.+....
T Consensus 241 ~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~ 273 (279)
T 2w5a_A 241 SDELNEIITRMLNLKDYHRPSVEEILENPLILE 273 (279)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred CHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence 245678899999999999999999998875544
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-37 Score=319.75 Aligned_cols=250 Identities=19% Similarity=0.251 Sum_probs=174.7
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++.+++++||||+++++++..++..++|||
T Consensus 16 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (303)
T 2vwi_A 16 DYE--LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMK 93 (303)
T ss_dssp CCE--EEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEE
T ss_pred hhh--hhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEeh
Confidence 355 778999999999999985 578999999987542 235678889999999999999999999999999999999
Q ss_pred ecCCCChhhhhhc----------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 522 YLPNGNLSEKIRT----------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 522 y~~~gsL~~~l~~----------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
|+++|+|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 9999999999863 368999999999999999999998 999999999999999999999999999875
Q ss_pred ccccCC-------CCcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc--cccccccccc
Q 005177 592 TQLADG-------SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI--DGLLGEMYNE 661 (710)
Q Consensus 592 ~~~~~~-------~~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~--~~~~~~~~~~ 661 (710)
...... ....+...+.+||.... ..++.++|||||||++|||+||+.|+........... .........
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~- 249 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET- 249 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcccc-
Confidence 432110 11113344677887654 5678899999999999999999999874332111000 000000000
Q ss_pred cccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 662 NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
. .............+.+++.+||+.||++|||+.|+++.
T Consensus 250 ~-~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 250 G-VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp ------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred c-cccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 0 00000001112456788999999999999999999863
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=332.88 Aligned_cols=189 Identities=20% Similarity=0.184 Sum_probs=163.3
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhcc------CCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV------RHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l------~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
..+.||+|+||.||+|.. .+|+.||||+++......+.+.+|++++..+ .|+||+++++++...+..++||||
T Consensus 101 ~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 180 (429)
T 3kvw_A 101 VLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFEL 180 (429)
T ss_dssp EEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECC
T ss_pred EEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEec
Confidence 788999999999999975 5689999999987655566778888888776 577999999999999999999999
Q ss_pred cCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc--eEEcccCccccccccC
Q 005177 523 LPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME--PHLAEFGFKYLTQLAD 596 (710)
Q Consensus 523 ~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~--~kl~DfGla~~~~~~~ 596 (710)
+. |+|.+++.. ..++..+..|+.|+++||+|||+. +|+||||||+|||++.++. +||+|||+++......
T Consensus 181 ~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~~ 256 (429)
T 3kvw_A 181 LS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRV 256 (429)
T ss_dssp CC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTCEETTCCC
T ss_pred cC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccceecCCcc
Confidence 96 699998865 378999999999999999999998 9999999999999999887 9999999997654322
Q ss_pred CCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCC
Q 005177 597 GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAG 643 (710)
Q Consensus 597 ~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~ 643 (710)
.. ..++.+|.+||+.....++.++|||||||++|||+||+.||.+.
T Consensus 257 ~~-~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 257 YT-YIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp CS-SCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cc-cCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 22 22445578889988888999999999999999999999988643
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-36 Score=314.56 Aligned_cols=240 Identities=19% Similarity=0.233 Sum_probs=192.8
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.||+|+||.||+|.. .+|+.||||.+.... ...+.+.+|++++++++||||+++++++.+++..++||||+++|
T Consensus 26 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 105 (303)
T 3a7i_A 26 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGG 105 (303)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred HhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCC
Confidence 678899999999999985 679999999997642 34677899999999999999999999999999999999999999
Q ss_pred Chhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--CCcccc
Q 005177 527 NLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAKI 603 (710)
Q Consensus 527 sL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--~~~~~~ 603 (710)
+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....+.
T Consensus 106 ~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 182 (303)
T 3a7i_A 106 SALDLLEPGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGT 182 (303)
T ss_dssp EHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCCCCSC
T ss_pred cHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccccccCccCCC
Confidence 99999975 578999999999999999999998 999999999999999999999999999876543221 112234
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 683 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 683 (710)
..+.+||......++.++|||||||++|||+||+.|+....... ....+........... ....+.+++.+
T Consensus 183 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~---~~~~l~~li~~ 253 (303)
T 3a7i_A 183 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK------VLFLIPKNNPPTLEGN---YSKPLKEFVEA 253 (303)
T ss_dssp GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHSCCCCCCSS---CCHHHHHHHHH
T ss_pred cCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH------HHHHhhcCCCCCCccc---cCHHHHHHHHH
Confidence 45778898888888999999999999999999999986432111 0000000000000111 12356788999
Q ss_pred cCCCCCCCCCCHHHHHHH
Q 005177 684 CTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 684 Cl~~~p~~RPs~~evl~~ 701 (710)
||+.||++|||+.|+++.
T Consensus 254 ~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 254 CLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp HCCSSGGGSCCHHHHTTC
T ss_pred HcCCChhhCcCHHHHhhC
Confidence 999999999999999864
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=323.08 Aligned_cols=251 Identities=21% Similarity=0.303 Sum_probs=189.0
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++++++||||+++++++.+++..++|
T Consensus 25 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 25 EKYE--NLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp GGEE--EEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhe--eeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 3455 778999999999999986 5699999999875422 356678999999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
|||+++++|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 103 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 103 FEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp EECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred EecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 999999999888753 678999999999999999999999 999999999999999999999999999876532211
Q ss_pred C--CcccccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc------------------cccc
Q 005177 598 S--FPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID------------------GLLG 656 (710)
Q Consensus 598 ~--~~~~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~------------------~~~~ 656 (710)
. ...+..++.+||..... .++.++||||+||++|||+||+.||............ ....
T Consensus 180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
T 4aaa_A 180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA 259 (331)
T ss_dssp ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGT
T ss_pred ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccc
Confidence 1 12244557788877654 6788999999999999999999998754321100000 0000
Q ss_pred ccccccccCCCcch----HHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 657 EMYNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 657 ~~~~~~~~~~~~~~----~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
....+. ....... ......+.+++.+|++.||++|||+.|+++
T Consensus 260 ~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 260 GVRLPE-IKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp TCCCCC-CSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cccCcc-ccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000000 0000000 122356789999999999999999999875
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-36 Score=312.37 Aligned_cols=239 Identities=15% Similarity=0.187 Sum_probs=186.9
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 518 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||.++.. ......+.+|+..+.++ +||||+++++++.+++..++
T Consensus 11 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 11 TEFH--ELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred chhh--hhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 4455 778999999999999986 58999999999863 23456778889999888 89999999999999999999
Q ss_pred EEeecCCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC---------------
Q 005177 519 LYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE--------------- 577 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~--------------- 577 (710)
||||+++|+|.+++.. ..++..+..|+.|+++||+|||+. +|+||||||+||+++.
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 9999999999999964 368999999999999999999998 9999999999999984
Q ss_pred ----CCceEEcccCccccccccCCCCcccccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc
Q 005177 578 ----NMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID 652 (710)
Q Consensus 578 ----~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~ 652 (710)
...+||+|||.++...... ...+...+.+||..... .++.++|||||||++|||++|+.++.......
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~----- 238 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ--VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWH----- 238 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC--CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHH-----
T ss_pred ccCCceEEEEcccccccccCCcc--ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHH-----
Confidence 4479999999987654322 12233446677776654 56789999999999999999887654322110
Q ss_pred ccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 653 GLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+........+.. ....+.+++.+||+.||++|||+.|++++
T Consensus 239 ----~~~~~~~~~~~~~---~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 239 ----EIRQGRLPRIPQV---LSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp ----HHHTTCCCCCSSC---CCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred ----HHHcCCCCCCCcc---cCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 1111110000111 12456788999999999999999999864
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-35 Score=336.36 Aligned_cols=327 Identities=21% Similarity=0.243 Sum_probs=232.8
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEE
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 155 (710)
.++.+||+++.+++..+..+.. +++|++|||++|+|++..|..|.++++|++|+|++|++++..|..|.++++|++|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~--l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~ 130 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFS--FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 130 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTT--CTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEE
T ss_pred CCCEEEeeCCCCCCCCHHHHhC--CCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEE
Confidence 4788999999998766667777 89999999999999887777899999999999999999987778899999999999
Q ss_pred CCCCCCCcCCchhccCCCCCCEEEccCCCCCC-CCCcccCCCCCCCeEEecCCcCCCCCcccccccccccc----ccccc
Q 005177 156 AFSNSFSGSVPAEISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTH----MEIGY 230 (710)
Q Consensus 156 L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~----L~l~~ 230 (710)
|++|++++..+..|+++++|++|+|++|.+++ .+|..++.+++|++|++++|++++..|..+..+.++.. ++++.
T Consensus 131 Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~ 210 (635)
T 4g8a_A 131 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 210 (635)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred CCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhccc
Confidence 99999998777789999999999999999875 46888899999999999999887766655443322211 11111
Q ss_pred ccc-----------------------------------------------------------------------------
Q 005177 231 NFY----------------------------------------------------------------------------- 233 (710)
Q Consensus 231 n~~----------------------------------------------------------------------------- 233 (710)
|.+
T Consensus 211 n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~ 290 (635)
T 4g8a_A 211 NPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 290 (635)
T ss_dssp CCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEEC
T ss_pred CcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhh
Confidence 100
Q ss_pred --------------------------------------------------cccC-------------------CccccCC
Q 005177 234 --------------------------------------------------QGNI-------------------PWQLGNM 244 (710)
Q Consensus 234 --------------------------------------------------~g~~-------------------p~~l~~l 244 (710)
.+.. +.....+
T Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l 370 (635)
T 4g8a_A 291 LDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDL 370 (635)
T ss_dssp CCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBC
T ss_pred hcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccc
Confidence 0000 0001123
Q ss_pred CccchhccccccCCc--cCc------------------------------------------------hhccCCCCCcEE
Q 005177 245 SEVQYLDIAGANLSG--SIP------------------------------------------------KELSNLTKLESL 274 (710)
Q Consensus 245 ~~L~~L~ls~n~l~g--~~p------------------------------------------------~~l~~l~~L~~L 274 (710)
++|+.|++++|.+.. ..+ ..+..+++++.+
T Consensus 371 ~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l 450 (635)
T 4g8a_A 371 PSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYL 450 (635)
T ss_dssp TTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEE
T ss_pred cccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccc
Confidence 344445554444321 000 112333444555
Q ss_pred EccccccCCCCCccccCCCCCCEEEccCCCC-CCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCC
Q 005177 275 FLFRNQLAGQVPWEFSRVTTLKSLDLSDNRL-SGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYF 353 (710)
Q Consensus 275 ~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l 353 (710)
+++.|.+.+..|..+..+++|+.|++++|.+ .+.+|..|..+++|++|+|++|++++..|..|..+++|++|+|++|++
T Consensus 451 ~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l 530 (635)
T 4g8a_A 451 DISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 530 (635)
T ss_dssp ECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred cccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcC
Confidence 5555555555555566666777777777764 334667777778888888888888877777788888888888888888
Q ss_pred CCCCCcccCCCCCCcEEECCCCcCCccCcccccCC-CceeeEecccCCcccc
Q 005177 354 SGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSG-GVLFKLILFSNNFTGI 404 (710)
Q Consensus 354 ~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~-~~L~~l~l~~N~l~g~ 404 (710)
++..|..+..+++|++||+++|++++..|..+..+ ++|+.|++++|.++..
T Consensus 531 ~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 531 FSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp CBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred CCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 87777777778888888888888887777777666 5788888888887754
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=314.99 Aligned_cols=248 Identities=21% Similarity=0.233 Sum_probs=192.7
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----------hhHHHHHHHHHHHhccC-CCCceeEEEE
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----------TRIKIVSEFITRIGTVR-HKNLIRLLGF 509 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----------~~~~~~~~e~~~l~~l~-H~niv~l~g~ 509 (710)
..+.|. ..+.||+|+||.||+|.. .+|+.||||.+.... ...+.+.+|++++.+++ ||||++++++
T Consensus 15 ~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 92 (298)
T 1phk_A 15 FYENYE--PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDT 92 (298)
T ss_dssp CTTTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhccc--eeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeee
Confidence 344565 778999999999999986 578999999997532 12456788999999996 9999999999
Q ss_pred EEcCCceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccC
Q 005177 510 CYNRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG 587 (710)
Q Consensus 510 ~~~~~~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG 587 (710)
+.+++..++||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 93 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 93 YETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred eccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEeccc
Confidence 9999999999999999999999975 578999999999999999999998 99999999999999999999999999
Q ss_pred ccccccccCC-CCcccccccCchhhhh------ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccc
Q 005177 588 FKYLTQLADG-SFPAKIAWTESGEFYN------AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYN 660 (710)
Q Consensus 588 la~~~~~~~~-~~~~~~~~~~~~e~~~------~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~ 660 (710)
+++....... ....+...+.+||... ...++.++|||||||++|||++|+.|+....... ....+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~ 243 (298)
T 1phk_A 170 FSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML------MLRMIMS 243 (298)
T ss_dssp TCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHH
T ss_pred chhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH------HHHHHhc
Confidence 9876543211 1112344467777764 3457889999999999999999999986432111 0011111
Q ss_pred ccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 661 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
.......+........+.+++.+|++.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 244 GNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp TCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred CCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 1101111111223356778999999999999999999986
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=321.90 Aligned_cols=243 Identities=14% Similarity=0.169 Sum_probs=194.0
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
+.|. ..+.||+|+||.||++.. .+++.||+|.+.... ...+.+.+|++++++++||||+++++++.+.+..++
T Consensus 41 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 41 RRYV--RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp EEEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred CceE--EEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 3455 778999999999999986 568899999997542 345678899999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC
Q 005177 519 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 596 (710)
||||+++++|.+++.. .+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 119 v~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 119 VLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp EECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 9999999999998864 578999999999999999999998 99999999999999999999999999987654221
Q ss_pred CC--CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 597 GS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 597 ~~--~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
.. ...+...|.+||......++.++|||||||++|||+||+.|+........ ...+.... ...+.. ..
T Consensus 196 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------~~~~~~~~-~~~~~~---~~ 265 (335)
T 2owb_A 196 ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET------YLRIKKNE-YSIPKH---IN 265 (335)
T ss_dssp CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH------HHHHHHTC-CCCCTT---SC
T ss_pred ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHH------HHHHhcCC-CCCCcc---CC
Confidence 11 12234457788988888889999999999999999999999864321110 00111111 011111 12
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..+.+++.+||+.||++|||+.|+++.
T Consensus 266 ~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 266 PVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp HHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 346688899999999999999999863
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-36 Score=310.94 Aligned_cols=239 Identities=14% Similarity=0.184 Sum_probs=185.9
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|.. .+|+.||||.+..... ..+.+.+|++.+++++||||+++++++.+++..++||||++
T Consensus 15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 94 (276)
T 2h6d_A 15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94 (276)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccC
Confidence 678899999999999986 4799999999975422 24578899999999999999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-CCcc
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SFPA 601 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-~~~~ 601 (710)
+++|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....
T Consensus 95 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 171 (276)
T 2h6d_A 95 GGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC 171 (276)
T ss_dssp SCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--------
T ss_pred CCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCCcceeccc
Confidence 9999999965 578899999999999999999998 999999999999999999999999999876543211 1112
Q ss_pred cccccCchhhhhccCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHH
Q 005177 602 KIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 680 (710)
Q Consensus 602 ~~~~~~~~e~~~~~~~-~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 680 (710)
+...+.+||....... +.++||||||+++|||++|+.|+....... ....+.... ...+.. ....+.++
T Consensus 172 ~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~-~~~~~~---~~~~l~~l 241 (276)
T 2h6d_A 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT------LFKKIRGGV-FYIPEY---LNRSVATL 241 (276)
T ss_dssp -----CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-CCCCTT---SCHHHHHH
T ss_pred CCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH------HHHHhhcCc-ccCchh---cCHHHHHH
Confidence 3444677787766544 688999999999999999999986432110 011111111 011111 12356788
Q ss_pred HhhcCCCCCCCCCCHHHHHHH
Q 005177 681 ALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 681 ~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+.+|++.||++|||+.|++++
T Consensus 242 i~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 242 LMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp HHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHccCChhhCCCHHHHHhC
Confidence 999999999999999999874
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-36 Score=315.60 Aligned_cols=244 Identities=16% Similarity=0.216 Sum_probs=188.9
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||.+.... ..+.+.+|++++.+++||||+++++++.+.+..++||||
T Consensus 29 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 105 (314)
T 3com_A 29 EVFD--VLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY 105 (314)
T ss_dssp -CEE--EEEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhhh--hheeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence 3355 778899999999999986 569999999998643 356688999999999999999999999999999999999
Q ss_pred cCCCChhhhhh---cCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--
Q 005177 523 LPNGNLSEKIR---TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-- 597 (710)
Q Consensus 523 ~~~gsL~~~l~---~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-- 597 (710)
+++|+|.+++. ...++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 106 ~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 182 (314)
T 3com_A 106 CGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKR 182 (314)
T ss_dssp CTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCB
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcccc
Confidence 99999999986 2578999999999999999999998 999999999999999999999999999876543211
Q ss_pred CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 598 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 598 ~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
....+...+.+||......++.++|||||||++|||++|+.|+.......... .......+. . .........+
T Consensus 183 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~~~~~-~---~~~~~~~~~l 255 (314)
T 3com_A 183 NTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF---MIPTNPPPT-F---RKPELWSDNF 255 (314)
T ss_dssp CCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH---HHHHSCCCC-C---SSGGGSCHHH
T ss_pred CccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHH---HHhcCCCcc-c---CCcccCCHHH
Confidence 11223445778898888788999999999999999999999986432111000 000000000 0 0111123457
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHH
Q 005177 678 LDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
.+++.+|++.||++|||+.|+++
T Consensus 256 ~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 256 TDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp HHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHHHccCChhhCcCHHHHHh
Confidence 78999999999999999999976
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-36 Score=317.97 Aligned_cols=282 Identities=22% Similarity=0.267 Sum_probs=205.6
Q ss_pred CCChhhHHHHHHHHhhC-CCCCCCCCCCCCCCCCCCCCCCCCceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcC
Q 005177 22 SANDPYSEALLSLKSEL-VDDFNSLHDWFVPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFF 100 (710)
Q Consensus 22 ~~~~~~~~all~~k~~~-~~~~~~l~~w~~~~~~~~~~~~~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l 100 (710)
++..+|++||++||+++ .|+.+.+.+|.... ....++|.|.|+.|+.. +..+.....
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~----~~~~~~~~~~g~~~~~~------------------~~~l~~~~~ 80 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQAN----SNNPQIETRTGRALKAT------------------ADLLEDATQ 80 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHT----TTCTTSCCSHHHHHHHH------------------HHHHHHHTS
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccc----cccccccccCCcchhhh------------------HHHHhcccc
Confidence 45567999999999999 67777788894110 01457899999999631 011111125
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEc
Q 005177 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L 180 (710)
+.++.|+|++|.++ .+|..++++++|++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..++++++|++|+|
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSI 157 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEE
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEEC
Confidence 67889999999987 78888888999999999999998 78888899999999999999988 78888999999999999
Q ss_pred cCCCCCCCCCcccCC---------CCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhc
Q 005177 181 AGSYFSGPIPSQFGS---------FKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLD 251 (710)
Q Consensus 181 ~~n~l~~~~p~~~~~---------l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ 251 (710)
++|++.+.+|..+.. +++|++|++++|.++ .+|..++++++|++|+
T Consensus 158 ~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-------------------------~lp~~l~~l~~L~~L~ 212 (328)
T 4fcg_A 158 RACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-------------------------SLPASIANLQNLKSLK 212 (328)
T ss_dssp EEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-------------------------CCCGGGGGCTTCCEEE
T ss_pred CCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-------------------------cchHhhcCCCCCCEEE
Confidence 998888888887654 555555555555544 4444455555666666
Q ss_pred cccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcc
Q 005177 252 IAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSG 331 (710)
Q Consensus 252 ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 331 (710)
+++|++++ +|..+..+++|++|++++|++.+.+|..+..+++|++|++++|++.+.+|..+..+++|+.|+|++|++.+
T Consensus 213 L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~ 291 (328)
T 4fcg_A 213 IRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLS 291 (328)
T ss_dssp EESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCC
T ss_pred ccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchh
Confidence 66666663 44456666777777777777777777777777777777777777777777777777777777777777777
Q ss_pred cCCcccCCCCCCcEEeccCCCCC
Q 005177 332 TVPESLVQLPSLEILFIWNNYFS 354 (710)
Q Consensus 332 ~~p~~~~~l~~L~~L~L~~N~l~ 354 (710)
.+|..+..+++|+.+++..|.+.
T Consensus 292 ~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 292 RLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CCCGGGGGSCTTCEEECCGGGSC
T ss_pred hccHHHhhccCceEEeCCHHHHH
Confidence 77777777777777777666554
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-36 Score=320.40 Aligned_cols=252 Identities=17% Similarity=0.143 Sum_probs=191.7
Q ss_pred hcCCchhhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchh------------------HHHHHHHHHHHhccCCCCcee
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATR------------------IKIVSEFITRIGTVRHKNLIR 505 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~------------------~~~~~~e~~~l~~l~H~niv~ 505 (710)
+.|. ..+.||+|+||.||+|.. +|+.||||.+...... .+.+.+|++++++++||||++
T Consensus 31 ~~y~--~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~ 107 (348)
T 2pml_X 31 NDYR--IIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT 107 (348)
T ss_dssp TTEE--EEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred CceE--EEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence 3455 778999999999999998 9999999999864221 178999999999999999999
Q ss_pred EEEEEEcCCceeEEEeecCCCChhhh------hhc----CCCHHHHHHHHHHHHHHHHHHhc-CCCCCceecCCCCCCeE
Q 005177 506 LLGFCYNRHQAYLLYDYLPNGNLSEK------IRT----KRDWAAKYKIVLGVARGLCFLHH-DCYPAIPHGDLKASNIV 574 (710)
Q Consensus 506 l~g~~~~~~~~~lv~Ey~~~gsL~~~------l~~----~~~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlk~~NiL 574 (710)
+++++.+.+..++||||+++|+|.++ +.. ..++..+..++.|++.||+|||+ . +|+||||||+||+
T Consensus 108 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil 184 (348)
T 2pml_X 108 CEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNIL 184 (348)
T ss_dssp CSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEE
T ss_pred EEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEE
Confidence 99999999999999999999999998 543 46899999999999999999998 7 9999999999999
Q ss_pred ecCCCceEEcccCccccccccCCCCcccccccCchhhhhcc-CCcc-ccceeeHHHHHHHHHhCCCCCCCCCCCCcccc-
Q 005177 575 FDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAM-KEEM-YMDVYGFGEIILEILTNGRLTNAGSSLQNKPI- 651 (710)
Q Consensus 575 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~e~~~~~-~~~~-~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~- 651 (710)
++.++.+||+|||+++...........+...+.+||..... .++. ++|||||||++|||+||+.|+...........
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 264 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNN 264 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHH
T ss_pred EcCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Confidence 99999999999999876533222222234457778877665 5555 89999999999999999999875432111000
Q ss_pred --ccccc------ccccccccC-CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 652 --DGLLG------EMYNENEVG-SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 652 --~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..... ....+.... ...........+.+++.+||+.||++|||+.|++++
T Consensus 265 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 265 IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00000 000000000 000001123467789999999999999999999863
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-36 Score=318.48 Aligned_cols=241 Identities=15% Similarity=0.181 Sum_probs=177.7
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccC-CCCceeEEEEEEc--------CCceeE
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVR-HKNLIRLLGFCYN--------RHQAYL 518 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~--------~~~~~l 518 (710)
..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.++.+++ |||||++++++.. ....++
T Consensus 32 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~l 111 (337)
T 3ll6_A 32 VRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLL 111 (337)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEE
T ss_pred EEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEE
Confidence 778999999999999985 689999999986543 34567889999999996 9999999999952 335799
Q ss_pred EEeecCCCChhhhhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCC--ceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 519 LYDYLPNGNLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPA--IPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~-----~~~~~~~~~i~~~ia~gL~yLH~~~~~~--iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
||||+. |+|.+++.. .+++..+..|+.|+++||+|||+. + |+||||||+||+++.++.+||+|||+++.
T Consensus 112 v~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 187 (337)
T 3ll6_A 112 LTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDFGSATT 187 (337)
T ss_dssp EEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCCTTCBC
T ss_pred EEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecCcccee
Confidence 999996 799998854 478999999999999999999998 6 99999999999999999999999999976
Q ss_pred ccccCCC--------------CcccccccCchhhh---hccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccc
Q 005177 592 TQLADGS--------------FPAKIAWTESGEFY---NAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGL 654 (710)
Q Consensus 592 ~~~~~~~--------------~~~~~~~~~~~e~~---~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~ 654 (710)
....... ...+...|.+||.. ....++.++|||||||++|||+||+.|+........
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~------ 261 (337)
T 3ll6_A 188 ISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI------ 261 (337)
T ss_dssp CSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------------
T ss_pred ccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh------
Confidence 5422110 11134446778876 455678899999999999999999999874332110
Q ss_pred ccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 655 LGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
........ . ... ....+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 262 ~~~~~~~~-~--~~~---~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~ 307 (337)
T 3ll6_A 262 VNGKYSIP-P--HDT---QYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIA 307 (337)
T ss_dssp ----CCCC-T--TCC---SSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred hcCcccCC-c--ccc---cchHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 00110000 0 000 1123567888999999999999999999998764
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=320.10 Aligned_cols=248 Identities=16% Similarity=0.133 Sum_probs=186.3
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---------hHHHHHHHHHHHhccCCCCceeEEEEEE
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---------RIKIVSEFITRIGTVRHKNLIRLLGFCY 511 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---------~~~~~~~e~~~l~~l~H~niv~l~g~~~ 511 (710)
+.+.|. ..+.||+|+||.||+|.. .+|+.||||.+..... ....+.+|++++++++||||+++++++.
T Consensus 8 l~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 85 (322)
T 2ycf_A 8 LRDEYI--MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 85 (322)
T ss_dssp HHHHEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhhcee--EeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEc
Confidence 344566 778999999999999985 6789999999975321 1345788999999999999999999997
Q ss_pred cCCceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc---eEEccc
Q 005177 512 NRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME---PHLAEF 586 (710)
Q Consensus 512 ~~~~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~---~kl~Df 586 (710)
.++ .++||||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++. +||+||
T Consensus 86 ~~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Df 161 (322)
T 2ycf_A 86 AED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDF 161 (322)
T ss_dssp SSS-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCC
T ss_pred CCc-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccC
Confidence 655 8999999999999998865 568889999999999999999998 9999999999999987654 999999
Q ss_pred CccccccccCCC-CcccccccCchhhhh---ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccccc
Q 005177 587 GFKYLTQLADGS-FPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN 662 (710)
Q Consensus 587 Gla~~~~~~~~~-~~~~~~~~~~~e~~~---~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 662 (710)
|+++........ ...+...|.+||... ...++.++|||||||++|||+||+.|+......... ...+....
T Consensus 162 g~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-----~~~~~~~~ 236 (322)
T 2ycf_A 162 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-----KDQITSGK 236 (322)
T ss_dssp TTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCH-----HHHHHHTC
T ss_pred ccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHH-----HHHHHhCc
Confidence 998765321100 011344577888753 456788999999999999999999998743321110 00111111
Q ss_pred ccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 663 EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 663 ~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
....+....+....+.+++.+|++.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 237 YNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 00000111122356788999999999999999999985
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-36 Score=316.29 Aligned_cols=246 Identities=17% Similarity=0.198 Sum_probs=187.2
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
+.|. ..+.||+|+||.||+|.. .+|..||+|.+.... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 19 ~~y~--i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 19 EVWE--IVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GTEE--EEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred ccee--ecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 3455 778899999999999986 568999999997543 235678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc--C
Q 005177 522 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA--D 596 (710)
Q Consensus 522 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~--~ 596 (710)
|+++|+|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++...... .
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 173 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK 173 (302)
T ss_dssp CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC
T ss_pred eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccccccc
Confidence 9999999998853 578999999999999999999998 9999999999999999999999999987543211 1
Q ss_pred CCCcccccccCchhhhh-----ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchH
Q 005177 597 GSFPAKIAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 671 (710)
Q Consensus 597 ~~~~~~~~~~~~~e~~~-----~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (710)
.....+...+.+||... ...++.++|||||||++|||+||+.|+....... ......... ........
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~-~~~~~~~~ 246 (302)
T 2j7t_A 174 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR------VLLKIAKSD-PPTLLTPS 246 (302)
T ss_dssp -----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHSC-CCCCSSGG
T ss_pred cccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH------HHHHHhccC-CcccCCcc
Confidence 11112344467778763 4567889999999999999999999986432110 000111000 00000111
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 672 DEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 672 ~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.....+.+++.+|++.||++|||+.|++++
T Consensus 247 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 247 KWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp GSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred ccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 123457788999999999999999999763
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-36 Score=314.60 Aligned_cols=247 Identities=19% Similarity=0.239 Sum_probs=184.9
Q ss_pred hhhhhcCCCCCccEEEEc--CCCc--EEEEEEeecc----chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVL--PTGI--TVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~--~~g~--~vAvK~l~~~----~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
..+.||+|+||.||+|.. .+++ .||||.++.. ....+.+.+|++++++++||||+++++++.+++ .++|||
T Consensus 22 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e 100 (291)
T 1u46_A 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTE 100 (291)
T ss_dssp EEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEE
T ss_pred eeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEe
Confidence 778899999999999984 3333 6999999753 234567889999999999999999999998755 899999
Q ss_pred ecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC
Q 005177 522 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 598 (710)
Q Consensus 522 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 598 (710)
|+++|+|.+++.. ..++..+.+++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 177 (291)
T 1u46_A 101 LAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177 (291)
T ss_dssp CCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCE
T ss_pred cccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccccccccccc
Confidence 9999999999964 478999999999999999999998 9999999999999999999999999998765432211
Q ss_pred -----CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHH
Q 005177 599 -----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 672 (710)
Q Consensus 599 -----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (710)
...+...+.+||......++.++|||||||++|||+| |+.|+....... ....+...... .+....
T Consensus 178 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~------~~~~~~~~~~~--~~~~~~ 249 (291)
T 1u46_A 178 YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ------ILHKIDKEGER--LPRPED 249 (291)
T ss_dssp EEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHHHTSCCC--CCCCTT
T ss_pred hhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH------HHHHHHccCCC--CCCCcC
Confidence 1112334778888887788899999999999999999 888886432111 01111111000 000111
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCCC
Q 005177 673 EIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 708 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~ 708 (710)
....+.+++.+|++.||++|||+.|+++.|+++.+.
T Consensus 250 ~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 250 CPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred cCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 234577899999999999999999999999988753
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-36 Score=319.43 Aligned_cols=252 Identities=22% Similarity=0.241 Sum_probs=187.1
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch------hHHHHHHHHHHHhccCCCCceeEEEEEEcCCce
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT------RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 516 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~------~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 516 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++++++|||||++++++.+.+..
T Consensus 10 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 10 KRYE--KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp ---C--EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred cccE--EEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 4466 778999999999999996 5699999999975322 134678899999999999999999999999999
Q ss_pred eEEEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccc
Q 005177 517 YLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 517 ~lv~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~ 593 (710)
++||||+++ +|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 88 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFG 163 (346)
T ss_dssp EEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred EEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceecc
Confidence 999999985 89888865 367888999999999999999999 99999999999999999999999999998654
Q ss_pred ccCCC--CcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCC---------------cccccccc
Q 005177 594 LADGS--FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKPIDGLL 655 (710)
Q Consensus 594 ~~~~~--~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~---------------~~~~~~~~ 655 (710)
..... ...++.+|.+||...+ ..++.++|||||||++|||++|..|+.+..... .|......
T Consensus 164 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 243 (346)
T 1ua2_A 164 SPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSL 243 (346)
T ss_dssp SCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSS
T ss_pred CCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccC
Confidence 32211 1224555778887754 457889999999999999999988876432111 01000000
Q ss_pred cccccccccCCCc---chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 656 GEMYNENEVGSSS---SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 656 ~~~~~~~~~~~~~---~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+..........+ ........+.+++.+|++.||++|||+.|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 244 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000000000000 001123567899999999999999999999875
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=332.45 Aligned_cols=305 Identities=19% Similarity=0.180 Sum_probs=239.6
Q ss_pred EEEcCCCCCcccCCcc-hhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECC
Q 005177 79 GINLSMKGLSGALPGK-PLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAF 157 (710)
Q Consensus 79 ~l~l~~~~l~g~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~ 157 (710)
.++++++.+.+ +|+. +.. +++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|+
T Consensus 55 ~l~l~~~~l~~-lp~~~~~~--l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 131 (597)
T 3oja_B 55 IVTFKNSTMRK-LPAALLDS--FRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 131 (597)
T ss_dssp EEEESSCEESE-ECTHHHHH--CCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred EEEeeCCCCCC-cCHHHHcc--CCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEee
Confidence 34445544433 4443 344 7788888888888887777778888888888888888887777777888888888888
Q ss_pred CCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccC
Q 005177 158 SNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNI 237 (710)
Q Consensus 158 ~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~ 237 (710)
+|.+++..+..|+++++|++|+|++|.+++..|..|+++++|++|++++|.+++. .++.+++|+.|++++|.+++
T Consensus 132 ~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l~~n~l~~-- 206 (597)
T 3oja_B 132 RNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST-- 206 (597)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEECCSSCCSE--
T ss_pred CCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---ChhhhhhhhhhhcccCcccc--
Confidence 8888865555567888888888888888877777788888888888888887764 24566777888888877664
Q ss_pred CccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCC
Q 005177 238 PWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLK 317 (710)
Q Consensus 238 p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 317 (710)
+...++|+.|++++|.++...+. + .++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++.+|..|+.++
T Consensus 207 ---l~~~~~L~~L~ls~n~l~~~~~~-~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 278 (597)
T 3oja_B 207 ---LAIPIAVEELDASHNSINVVRGP-V--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQ 278 (597)
T ss_dssp ---EECCTTCSEEECCSSCCCEEECS-C--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCS
T ss_pred ---ccCCchhheeeccCCcccccccc-c--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCcc
Confidence 34456788888888888743322 2 3689999999999987 36788899999999999999998899999999
Q ss_pred CCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecc
Q 005177 318 NLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILF 397 (710)
Q Consensus 318 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~ 397 (710)
+|+.|+|++|.+++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|++++|.+++. | +..++.|+.|+++
T Consensus 279 ~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~ 353 (597)
T 3oja_B 279 RLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLS 353 (597)
T ss_dssp SCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECC
T ss_pred CCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEee
Confidence 99999999999986 5777788999999999999998 6788888889999999999999854 3 5667889999999
Q ss_pred cCCcccc
Q 005177 398 SNNFTGI 404 (710)
Q Consensus 398 ~N~l~g~ 404 (710)
+|.+++.
T Consensus 354 ~N~~~~~ 360 (597)
T 3oja_B 354 HNDWDCN 360 (597)
T ss_dssp SSCEEHH
T ss_pred CCCCCCh
Confidence 9999875
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-36 Score=332.67 Aligned_cols=193 Identities=18% Similarity=0.206 Sum_probs=160.7
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcC-----
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR----- 513 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~----- 513 (710)
.+.|. ..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|++++++++|||||++++++...
T Consensus 25 ~~~y~--~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 102 (432)
T 3n9x_A 25 PDNYI--IKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKF 102 (432)
T ss_dssp CTTEE--EEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred cCCEE--EEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcC
Confidence 34555 788999999999999985 67899999999753 23456788999999999999999999999876
Q ss_pred CceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 514 HQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 514 ~~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
+..|+||||+. |+|.+++.. .+++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 103 ~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 103 DELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp CCEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred CeEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 57899999997 699999986 478999999999999999999999 999999999999999999999999999986
Q ss_pred ccccCC------------------------CCcccccccCchhhh-hccCCccccceeeHHHHHHHHHhCCCCCC
Q 005177 592 TQLADG------------------------SFPAKIAWTESGEFY-NAMKEEMYMDVYGFGEIILEILTNGRLTN 641 (710)
Q Consensus 592 ~~~~~~------------------------~~~~~~~~~~~~e~~-~~~~~~~~~DVySfGvvl~Elltg~~p~~ 641 (710)
...... ....++.+|.+||.. ....++.++||||+||++|||+||..|+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 542211 111245678888875 55668999999999999999998655543
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-36 Score=312.67 Aligned_cols=241 Identities=15% Similarity=0.181 Sum_probs=175.4
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.||+|+||.||+|.. .+|+.||||+++.... ..+.+.++...++.++||||+++++++.+++..++||||++
T Consensus 11 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~- 89 (290)
T 3fme_A 11 PIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD- 89 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS-
T ss_pred hHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc-
Confidence 778999999999999985 6899999999976422 23445556666888999999999999999999999999998
Q ss_pred CChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC-
Q 005177 526 GNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 598 (710)
Q Consensus 526 gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~- 598 (710)
|+|.+++.. ..++..+..++.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||+++........
T Consensus 90 ~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 167 (290)
T 3fme_A 90 TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKD 167 (290)
T ss_dssp EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC-------------
T ss_pred cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCccccccccccc
Confidence 588887753 5789999999999999999999842 8999999999999999999999999998765432211
Q ss_pred CcccccccCchhhh----hccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 599 FPAKIAWTESGEFY----NAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 599 ~~~~~~~~~~~e~~----~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
...+...+.+||.. ....++.++||||+||++|||+||+.|+........ ...+.......... .....
T Consensus 168 ~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~ 240 (290)
T 3fme_A 168 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ-----QLKQVVEEPSPQLP--ADKFS 240 (290)
T ss_dssp --CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH-----HHHHHHHSCCCCCC--TTTSC
T ss_pred ccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHH-----HHHHHhccCCCCcc--cccCC
Confidence 11244457788875 455688899999999999999999999864322110 01111111101000 01123
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
..+.+++.+|++.||++|||+.|+++
T Consensus 241 ~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 241 AEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 45778999999999999999999976
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-36 Score=346.89 Aligned_cols=241 Identities=16% Similarity=0.128 Sum_probs=193.5
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 518 (710)
+|. ..+.||+|+||.||+|.. .+|+.||||+++... ...+.+..|.+++..+ +||||+++++++.+.+..|+
T Consensus 342 ~f~--~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l 419 (674)
T 3pfq_A 342 DFN--FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 419 (674)
T ss_dssp TEE--EEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred ceE--EEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence 355 778999999999999985 678899999998632 2345677888898887 69999999999999999999
Q ss_pred EEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC
Q 005177 519 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 596 (710)
||||+++|+|.+++.. .+++..+..|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 420 V~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~ 496 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG 496 (674)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT
T ss_pred EEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccccCC
Confidence 9999999999999975 678999999999999999999999 99999999999999999999999999998532221
Q ss_pred C--CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 597 G--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 597 ~--~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
. ....++..|.+||+.....++.++|||||||++|||+||+.||.+.... .....+.... ...+. ...
T Consensus 497 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~------~~~~~i~~~~-~~~p~---~~s 566 (674)
T 3pfq_A 497 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED------ELFQSIMEHN-VAYPK---SMS 566 (674)
T ss_dssp CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHSSC-CCCCT---TSC
T ss_pred cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH------HHHHHHHhCC-CCCCc---cCC
Confidence 1 1222556688899998889999999999999999999999999753321 1111222221 11111 123
Q ss_pred HHHHHHHhhcCCCCCCCCCCH-----HHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSM-----EEALK 700 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~-----~evl~ 700 (710)
..+.+++.+|++.||++||++ +||.+
T Consensus 567 ~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 567 KEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp HHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred HHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 457789999999999999997 67654
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-36 Score=326.18 Aligned_cols=252 Identities=18% Similarity=0.185 Sum_probs=192.1
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccC--------CCCceeEEEEEE---
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR--------HKNLIRLLGFCY--- 511 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~--------H~niv~l~g~~~--- 511 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||+++......+.+.+|++++++++ ||||+++++++.
T Consensus 37 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 37 GRYH--VIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CeEE--EEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 3455 778999999999999984 67899999999876666778889999999886 888999999998
Q ss_pred -cCCceeEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC-------
Q 005177 512 -NRHQAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM------- 579 (710)
Q Consensus 512 -~~~~~~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~------- 579 (710)
+....++||||+ +|++.+.+.. .+++..+..|+.|+++||+|||+.+ +|+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~~ 191 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLA 191 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhhh
Confidence 556899999999 5666666643 4789999999999999999999864 899999999999999775
Q ss_pred ------------------------------------------ceEEcccCccccccccCCCCcccccccCchhhhhccCC
Q 005177 580 ------------------------------------------EPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKE 617 (710)
Q Consensus 580 ------------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 617 (710)
.+||+|||+++........ ..++..|.+||......+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~-~~gt~~y~aPE~~~~~~~ 270 (397)
T 1wak_A 192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTE-DIQTRQYRSLEVLIGSGY 270 (397)
T ss_dssp HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCS-CCSCGGGCCHHHHHTSCC
T ss_pred hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCcc-CCCCCcccCChhhcCCCC
Confidence 7999999999866433222 224555788898888889
Q ss_pred ccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc-------ccc--------------ccccccc----cc---C----
Q 005177 618 EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-------GLL--------------GEMYNEN----EV---G---- 665 (710)
Q Consensus 618 ~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~-------~~~--------------~~~~~~~----~~---~---- 665 (710)
+.++|||||||++|||+||+.||............ ... ....... .. .
T Consensus 271 ~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (397)
T 1wak_A 271 NTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGL 350 (397)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCH
T ss_pred CcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcch
Confidence 99999999999999999999998743321110000 000 0000000 00 0
Q ss_pred ------CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 666 ------SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 666 ------~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
......+....+.+++.+||+.||++|||+.|++++
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 351 FEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp HHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred hHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 001123455678899999999999999999999863
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=329.70 Aligned_cols=174 Identities=19% Similarity=0.215 Sum_probs=150.1
Q ss_pred eeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCC
Q 005177 69 KCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSL 148 (710)
Q Consensus 69 ~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L 148 (710)
.|.. ..| .+.+.++++ .+|+.+ .+.|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++
T Consensus 3 ~C~~--~~~--c~~~~~~l~-~ip~~~----~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l 73 (549)
T 2z81_A 3 SCDA--SGV--CDGRSRSFT-SIPSGL----TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSL 73 (549)
T ss_dssp EECT--TSE--EECTTSCCS-SCCSCC----CTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred cCCC--Cce--EECCCCccc-cccccC----CCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhcccc
Confidence 5775 234 577887776 466654 4689999999999998889999999999999999999999999999999
Q ss_pred CCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCC-CCCcccCCCCCCCeEEecCCcCCCCCc-cccccccccccc
Q 005177 149 RNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIP-AELGMLKTVTHM 226 (710)
Q Consensus 149 ~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L 226 (710)
++|++|||++|.+++..|..|+++++|++|+|++|.+++ .+|..++++++|++|++++|.+.+.+| ..+..+++|++|
T Consensus 74 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L 153 (549)
T 2z81_A 74 GSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNEL 153 (549)
T ss_dssp TTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEE
T ss_pred ccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCee
Confidence 999999999999998888889999999999999999987 467889999999999999999666665 689999999999
Q ss_pred ccccccccccCCccccCCCccchhc
Q 005177 227 EIGYNFYQGNIPWQLGNMSEVQYLD 251 (710)
Q Consensus 227 ~l~~n~~~g~~p~~l~~l~~L~~L~ 251 (710)
++++|.+++.+|..++++++|+.|+
T Consensus 154 ~L~~n~l~~~~~~~l~~l~~L~~L~ 178 (549)
T 2z81_A 154 EIKALSLRNYQSQSLKSIRDIHHLT 178 (549)
T ss_dssp EEEETTCCEECTTTTTTCSEEEEEE
T ss_pred eccCCcccccChhhhhccccCceEe
Confidence 9999999998887776544443333
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-34 Score=333.17 Aligned_cols=334 Identities=21% Similarity=0.207 Sum_probs=251.7
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEE
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 155 (710)
.+..++++++.+.+..|..+.....++|+.|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|+
T Consensus 223 ~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 302 (680)
T 1ziw_A 223 SIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLN 302 (680)
T ss_dssp CCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEE
T ss_pred cccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEe
Confidence 45677778888877777666652224588888888888877777888888888888888888888787777777777777
Q ss_pred CCCCCCCc-----CCch----hccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecC--------------------
Q 005177 156 AFSNSFSG-----SVPA----EISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAG-------------------- 206 (710)
Q Consensus 156 L~~N~l~~-----~~p~----~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~-------------------- 206 (710)
+++|...+ .+|. .|..+++|++|++++|.+++..|..|.++++|++|++++
T Consensus 303 L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~ 382 (680)
T 1ziw_A 303 LKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSP 382 (680)
T ss_dssp CTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSC
T ss_pred ccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCc
Confidence 77665443 2332 566777777777777777776666666666666666554
Q ss_pred --------CcCCCCCcccccccccccccccccccccccCC-ccccCCCccchhccccccCCccCchhccCCCCCcEEEcc
Q 005177 207 --------NLLNDQIPAELGMLKTVTHMEIGYNFYQGNIP-WQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLF 277 (710)
Q Consensus 207 --------N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p-~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~ 277 (710)
|.+++..|..+..+++|+.|++++|.+.+.+| ..+.++++|++|++++|++++..+..+..+++|+.|+++
T Consensus 383 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~ 462 (680)
T 1ziw_A 383 LHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLR 462 (680)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECT
T ss_pred CceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhc
Confidence 45555556667777777777777777777665 567777777888888877777777777777888888888
Q ss_pred ccccC--CCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCC--------cccCCCCCCcEEe
Q 005177 278 RNQLA--GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVP--------ESLVQLPSLEILF 347 (710)
Q Consensus 278 ~n~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p--------~~~~~l~~L~~L~ 347 (710)
+|.+. +.+|..+..+++|+.|++++|++++..|..|..+++|+.|++++|++++..+ ..+..+++|++|+
T Consensus 463 ~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~ 542 (680)
T 1ziw_A 463 RVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILN 542 (680)
T ss_dssp TSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEE
T ss_pred cccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEE
Confidence 87776 5677788888889999999999888777788888999999999998876422 2367888999999
Q ss_pred ccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecccCCcccchhHHH
Q 005177 348 IWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIVMFIA 409 (710)
Q Consensus 348 L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~l~g~i~~~~ 409 (710)
|++|.++...+..+..+++|+.|++++|++++..+..+..+..|+.|++++|++++..+-.+
T Consensus 543 L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 604 (680)
T 1ziw_A 543 LESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVF 604 (680)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHH
T ss_pred CCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHh
Confidence 99999884444568888999999999999986444456778899999999999988776443
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-36 Score=313.27 Aligned_cols=245 Identities=18% Similarity=0.267 Sum_probs=184.6
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEc----------
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN---------- 512 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~---------- 512 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||.+.......+.+.+|++++++++||||+++++++.+
T Consensus 6 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 6 SDFE--EIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred ccch--hhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 4455 778999999999999985 689999999998766667788999999999999999999999865
Q ss_pred ---CCceeEEEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEccc
Q 005177 513 ---RHQAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEF 586 (710)
Q Consensus 513 ---~~~~~lv~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df 586 (710)
.+..++||||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~df 160 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDF 160 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEeeC
Confidence 3568999999999999999974 356788899999999999999999 9999999999999999999999999
Q ss_pred CccccccccC----------------CCCcccccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc
Q 005177 587 GFKYLTQLAD----------------GSFPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK 649 (710)
Q Consensus 587 Gla~~~~~~~----------------~~~~~~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~ 649 (710)
|+++...... .....+...+.+||..... .++.++|||||||++|||++ |+........
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~- 236 (303)
T 1zy4_A 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVN- 236 (303)
T ss_dssp CCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH-
T ss_pred cchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHH-
Confidence 9987643210 0011134457778877643 68899999999999999998 4332111000
Q ss_pred cccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 650 PIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
....+..................+.+++.+|++.||++|||+.|++++
T Consensus 237 ----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 237 ----ILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp ----HHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ----HHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 000110000000001111223456788999999999999999999874
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-36 Score=315.75 Aligned_cols=253 Identities=29% Similarity=0.401 Sum_probs=219.2
Q ss_pred CCCcEEECCCCcCcc--cCCccccCCCCCcEEECcC-CCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCE
Q 005177 101 NELVDLNLSHNSFSG--QFPVEIFNLTSLISLDISR-NNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKV 177 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~ 177 (710)
.+++.|+|++|.++| .+|..|.++++|++|+|++ |.+.+.+|..|+++++|++|+|++|.+++.+|..+.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 467888888888888 7888888888888888884 8888888888888888888888888888888888888888888
Q ss_pred EEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCC-ccchhcccccc
Q 005177 178 LNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMS-EVQYLDIAGAN 256 (710)
Q Consensus 178 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~-~L~~L~ls~n~ 256 (710)
|+|++|.+++.+|..|.++++|++|++++|.+++.+| ..+++++ +|++|++++|+
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p------------------------~~l~~l~~~L~~L~L~~N~ 185 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP------------------------DSYGSFSKLFTSMTISRNR 185 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECC------------------------GGGGCCCTTCCEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCC------------------------HHHhhhhhcCcEEECcCCe
Confidence 8888888887777777777777777777777665544 4455555 78888899999
Q ss_pred CCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcc
Q 005177 257 LSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPES 336 (710)
Q Consensus 257 l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 336 (710)
+++.+|..+..++ |+.|++++|.+++.+|..+..+++|+.|++++|++++.+|. +..+++|++|+|++|++++.+|..
T Consensus 186 l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~ 263 (313)
T 1ogq_A 186 LTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQG 263 (313)
T ss_dssp EEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGG
T ss_pred eeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChH
Confidence 9999999999987 99999999999999999999999999999999999987776 888999999999999999999999
Q ss_pred cCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCc-CCcc
Q 005177 337 LVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNN-FNGS 380 (710)
Q Consensus 337 ~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~-l~g~ 380 (710)
+..+++|++|++++|+++|.+|.. ..+++|+.+++++|. +.|.
T Consensus 264 l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 264 LTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp GGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEEST
T ss_pred HhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCccCC
Confidence 999999999999999999999986 888999999999998 6653
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-36 Score=319.53 Aligned_cols=252 Identities=21% Similarity=0.315 Sum_probs=188.5
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEc------
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYN------ 512 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~------ 512 (710)
...|. ..+.||+|+||.||+|.. .+|+.||||++..... ....+.+|++++++++|||||++++++..
T Consensus 16 ~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 93 (351)
T 3mi9_A 16 VSKYE--KLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN 93 (351)
T ss_dssp GGGEE--EEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-----
T ss_pred cccee--EEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccc
Confidence 34565 778999999999999986 6899999999865422 24567889999999999999999999987
Q ss_pred --CCceeEEEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccC
Q 005177 513 --RHQAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG 587 (710)
Q Consensus 513 --~~~~~lv~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG 587 (710)
.+..++||||+++ ++.+.+.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 94 ~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 169 (351)
T 3mi9_A 94 RCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFG 169 (351)
T ss_dssp ---CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred cCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccch
Confidence 3468999999984 77777754 578999999999999999999998 99999999999999999999999999
Q ss_pred ccccccccCC------CCcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCC-------------
Q 005177 588 FKYLTQLADG------SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ------------- 647 (710)
Q Consensus 588 la~~~~~~~~------~~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~------------- 647 (710)
+++....... ....++.+|.+||...+ ..++.++|||||||++|||+||+.|+.+.....
T Consensus 170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~ 249 (351)
T 3mi9_A 170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 249 (351)
T ss_dssp TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 9976532111 11123455778887765 457899999999999999999999987432110
Q ss_pred --cccccccccccccccc--cCCCcchHHH------HHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 648 --NKPIDGLLGEMYNENE--VGSSSSLQDE------IKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 648 --~~~~~~~~~~~~~~~~--~~~~~~~~~~------~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.|...... +..+... ........+. ...+.+++.+|++.||++|||++|+++.
T Consensus 250 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 250 PEVWPNVDNY-ELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TTTSTTGGGC-GGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhccccccc-hhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 00000000 0000000 0001111111 2357799999999999999999999864
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-36 Score=324.56 Aligned_cols=251 Identities=17% Similarity=0.240 Sum_probs=189.5
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCce---
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA--- 516 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~--- 516 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++...+..
T Consensus 42 ~~y~--~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 42 KTYV--SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccEE--EEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 4455 778899999999999985 679999999997632 2356788999999999999999999999887654
Q ss_pred ---eEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccc
Q 005177 517 ---YLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 517 ---~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~ 593 (710)
++||||++ |+|.+.+....++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 195 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred eeEEEEEcccc-ccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence 99999998 699999988899999999999999999999999 99999999999999999999999999998654
Q ss_pred ccCCCCcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc---------ccccc------
Q 005177 594 LADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID---------GLLGE------ 657 (710)
Q Consensus 594 ~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~---------~~~~~------ 657 (710)
....... ++.+|.+||.... ..++.++|||||||++|||+||+.||.+.......... .....
T Consensus 196 ~~~~~~~-~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 274 (371)
T 4exu_A 196 AEMTGYV-VTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAA 274 (371)
T ss_dssp ----CTT-CCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHH
T ss_pred cCcCCcc-cCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhh
Confidence 3322222 3455778887765 67899999999999999999999998743311100000 00000
Q ss_pred --cccccccCCCcchH----HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 658 --MYNENEVGSSSSLQ----DEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 658 --~~~~~~~~~~~~~~----~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.............. .....+.+++.+|++.||++|||+.|+++.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 275 KSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 00000000001111 123567899999999999999999999875
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-36 Score=310.60 Aligned_cols=229 Identities=12% Similarity=0.049 Sum_probs=181.4
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
.|. ..+.||+|+||.||+|.. .+|+.||||.+..... ..+.+.+|++.+.+++|||||++++++.+++..|+|
T Consensus 32 ~y~--i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 32 RYR--LLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TEE--EEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cEE--EEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 355 778999999999999986 5699999999986422 246788999999999999999999999999999999
Q ss_pred EeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC
Q 005177 520 YDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 599 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 599 (710)
|||+++|+|.+++.......+..+|+.|+++||+|||+. +|+||||||+|||++.++.+||+++|..
T Consensus 110 ~e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~~~---------- 176 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPATM---------- 176 (286)
T ss_dssp EECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCCCC----------
T ss_pred EEecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecccc----------
Confidence 999999999999987666677889999999999999999 9999999999999999999999966531
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 679 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (710)
..++.++|||||||++|||+||+.||.+.......... .+..............+....+.+
T Consensus 177 ---------------~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~ 238 (286)
T 3uqc_A 177 ---------------PDANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA---ERDTAGQPIEPADIDRDIPFQISA 238 (286)
T ss_dssp ---------------TTCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC---CBCTTSCBCCHHHHCTTSCHHHHH
T ss_pred ---------------CCCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH---HHHhccCCCChhhcccCCCHHHHH
Confidence 12567899999999999999999999854432211000 000011000000000112245778
Q ss_pred HHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 680 VALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 680 l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
++.+||+.||++| |+.|+++.|+.+..
T Consensus 239 li~~~l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 239 VAARSVQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp HHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred HHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence 9999999999999 99999999987653
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=319.08 Aligned_cols=253 Identities=16% Similarity=0.191 Sum_probs=177.7
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCc-----
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ----- 515 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~----- 515 (710)
..+.|. ..+.||+|+||.||+|.. .+|..||||++.........+.+|++.+++++|||||++++++...+.
T Consensus 21 ~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 98 (360)
T 3e3p_A 21 EMDRFQ--VERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRD 98 (360)
T ss_dssp HHTTEE--EC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTC
T ss_pred hccceE--EEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccc
Confidence 345566 788999999999999986 679999999997665555667788888999999999999999976443
Q ss_pred --eeEEEeecCCCChhhhhh----c--CCCHHHHHHHHHHHHHHHHHHh--cCCCCCceecCCCCCCeEecC-CCceEEc
Q 005177 516 --AYLLYDYLPNGNLSEKIR----T--KRDWAAKYKIVLGVARGLCFLH--HDCYPAIPHGDLKASNIVFDE-NMEPHLA 584 (710)
Q Consensus 516 --~~lv~Ey~~~gsL~~~l~----~--~~~~~~~~~i~~~ia~gL~yLH--~~~~~~iiHrDlk~~NiLl~~-~~~~kl~ 584 (710)
.++||||+++ ++.+.+. . ..++.....++.|++.||.||| +. +|+||||||+|||++. ++.+||+
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~kl~ 174 (360)
T 3e3p_A 99 IYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTLKLC 174 (360)
T ss_dssp EEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEEEEC
T ss_pred eeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcEEEe
Confidence 7899999986 5554443 2 4678888999999999999999 66 9999999999999996 8999999
Q ss_pred ccCccccccccCCC-CcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc---------c
Q 005177 585 EFGFKYLTQLADGS-FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID---------G 653 (710)
Q Consensus 585 DfGla~~~~~~~~~-~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~---------~ 653 (710)
|||+++........ ...++.+|.+||.... ..++.++|||||||++|||+||+.||.+.......... .
T Consensus 175 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 254 (360)
T 3e3p_A 175 DFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSRE 254 (360)
T ss_dssp CCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHH
T ss_pred eCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHH
Confidence 99999866433222 1224455778887754 44799999999999999999999998754321100000 0
Q ss_pred ccccccccc------ccCCCcchH--------HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 654 LLGEMYNEN------EVGSSSSLQ--------DEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 654 ~~~~~~~~~------~~~~~~~~~--------~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..... ++. .......+. .....+.+++.+|++.||++|||+.|++++
T Consensus 255 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 255 VLRKL-NPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHHHH-CTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHhc-ccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 00000 000 000000011 124578899999999999999999999874
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-36 Score=323.03 Aligned_cols=242 Identities=16% Similarity=0.206 Sum_probs=181.1
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcC---------------
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--------------- 513 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--------------- 513 (710)
..+.||+|+||.||+|.. .+|+.||||++..... ...+|++++++++|||||++++++...
T Consensus 11 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~ 87 (383)
T 3eb0_A 11 LGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR---YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHN 87 (383)
T ss_dssp EEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHTTCCCTTBCCEEEEEEEC---------------
T ss_pred EEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc---hHHHHHHHHHHcCCCCccchhheeeecCcccccccccccccc
Confidence 778999999999999985 7899999999975432 234799999999999999999998543
Q ss_pred -----------------------CceeEEEeecCCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCce
Q 005177 514 -----------------------HQAYLLYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIP 564 (710)
Q Consensus 514 -----------------------~~~~lv~Ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~ii 564 (710)
...++||||++ |+|.+.+.. .+++.....++.|+++||+|||+. +|+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---gi~ 163 (383)
T 3eb0_A 88 KLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL---GIC 163 (383)
T ss_dssp ----------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEE
T ss_pred cccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---cCc
Confidence 23889999998 588877753 578899999999999999999998 999
Q ss_pred ecCCCCCCeEec-CCCceEEcccCccccccccCCC-CcccccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCC
Q 005177 565 HGDLKASNIVFD-ENMEPHLAEFGFKYLTQLADGS-FPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTN 641 (710)
Q Consensus 565 HrDlk~~NiLl~-~~~~~kl~DfGla~~~~~~~~~-~~~~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~ 641 (710)
||||||+||+++ .++.+||+|||+++........ ...+..+|.+||...+. .++.++||||+||++|||++|+.||.
T Consensus 164 H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 243 (383)
T 3eb0_A 164 HRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFS 243 (383)
T ss_dssp CSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred cCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCC
Confidence 999999999998 6889999999999865432222 12244557788876654 58999999999999999999999987
Q ss_pred CCCCCCccccc-c---------------cccccccccccCCCcchH-----HHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 642 AGSSLQNKPID-G---------------LLGEMYNENEVGSSSSLQ-----DEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 642 ~~~~~~~~~~~-~---------------~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
+.......... . ...+..-+. . ....+. .....+.+++.+|++.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 244 GETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPT-L-KAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA 321 (383)
T ss_dssp CSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCC-C-CCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCc-c-CcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 54321110000 0 000000000 0 001111 12245789999999999999999999985
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-36 Score=323.85 Aligned_cols=251 Identities=20% Similarity=0.277 Sum_probs=175.7
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcC------
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR------ 513 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~------ 513 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|++++++++|||||++++++...
T Consensus 29 ~~y~--~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 29 ERYQ--NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp TTEE--EEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CceE--EeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 4455 778999999999999984 78999999999753 22456788999999999999999999999764
Q ss_pred CceeEEEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccc
Q 005177 514 HQAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 592 (710)
Q Consensus 514 ~~~~lv~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~ 592 (710)
...++||||+ +++|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 182 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 182 (367)
T ss_dssp CCCEEEEECC-CEECC-----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC-------
T ss_pred CeEEEEeccc-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence 5679999999 6899998875 578999999999999999999998 9999999999999999999999999999865
Q ss_pred cccCCCCcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc---------cccccc-----
Q 005177 593 QLADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI---------DGLLGE----- 657 (710)
Q Consensus 593 ~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~---------~~~~~~----- 657 (710)
...... ..++.+|.+||.... ..++.++||||+||++|||+||+.||.+......... ......
T Consensus 183 ~~~~~~-~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~ 261 (367)
T 2fst_X 183 ADEMTG-YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261 (367)
T ss_dssp ---------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHH
T ss_pred cccCCC-cCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHH
Confidence 432211 224556788887765 6788999999999999999999999875432110000 000000
Q ss_pred ---cccccccCCCcchH----HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 658 ---MYNENEVGSSSSLQ----DEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 658 ---~~~~~~~~~~~~~~----~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
............+. .....+.+++.+|++.||++|||+.|++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 00000000001111 112457899999999999999999999874
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-36 Score=328.65 Aligned_cols=188 Identities=21% Similarity=0.266 Sum_probs=148.1
Q ss_pred hhhhcCCCCCccEEEEcC---CCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEc--CCceeEEEeecCC
Q 005177 451 CEEAARPQSAAGCKAVLP---TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQAYLLYDYLPN 525 (710)
Q Consensus 451 ~~~ig~g~~g~vy~~~~~---~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~lv~Ey~~~ 525 (710)
...||+|+||.||+|... ++..||||++.... ..+.+.+|++++++++|||||++++++.. +...++||||++
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~- 103 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG-ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE- 103 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSS-CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS-
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC-CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC-
Confidence 457999999999999853 68899999997543 23467889999999999999999999964 668999999997
Q ss_pred CChhhhhhc-----------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe----cCCCceEEcccCccc
Q 005177 526 GNLSEKIRT-----------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF----DENMEPHLAEFGFKY 590 (710)
Q Consensus 526 gsL~~~l~~-----------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl----~~~~~~kl~DfGla~ 590 (710)
|+|.+++.. .+++..+..|+.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++
T Consensus 104 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 180 (405)
T 3rgf_A 104 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR 180 (405)
T ss_dssp EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC
T ss_pred CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEECCCce
Confidence 588887752 278889999999999999999999 99999999999999 677999999999998
Q ss_pred cccccCC-----CCcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCC
Q 005177 591 LTQLADG-----SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAG 643 (710)
Q Consensus 591 ~~~~~~~-----~~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~ 643 (710)
....... ....++.+|.+||+... ..++.++|||||||++|||+||+.||...
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 181 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred ecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 6542211 11124556788887765 45899999999999999999999999743
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=307.67 Aligned_cols=249 Identities=16% Similarity=0.170 Sum_probs=193.4
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCce
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 516 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 516 (710)
.+.+.|. ..+.||+|+||.||+|.. .+|+.||||.+.... ...+.+.+|++++++++||||+++++++.+.+..
T Consensus 19 ~~~~~y~--i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 96 (287)
T 2wei_A 19 TFAERYN--IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSF 96 (287)
T ss_dssp HHHHHEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred HHhhcce--eeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeE
Confidence 3445666 788999999999999986 479999999997542 2356788999999999999999999999999999
Q ss_pred eEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC---CceEEcccCcccc
Q 005177 517 YLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN---MEPHLAEFGFKYL 591 (710)
Q Consensus 517 ~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~---~~~kl~DfGla~~ 591 (710)
++||||+++++|.+.+.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.+ +.+||+|||+++.
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~ 173 (287)
T 2wei_A 97 YIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (287)
T ss_dssp EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGT
T ss_pred EEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCccee
Confidence 999999999999998854 678999999999999999999998 99999999999999754 4799999999876
Q ss_pred ccccCCCC-cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcch
Q 005177 592 TQLADGSF-PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 670 (710)
Q Consensus 592 ~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (710)
........ ..+...+.+||.... .++.++||||||+++|||+||+.|+....... ....+.........+..
T Consensus 174 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~ 246 (287)
T 2wei_A 174 FQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD------ILKRVETGKYAFDLPQW 246 (287)
T ss_dssp BCCCSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCCCCCCSGGG
T ss_pred ecCCCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHH------HHHHHHcCCCCCCchhh
Confidence 54322211 123445778887654 47889999999999999999999986432111 00111111100001111
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 671 QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 671 ~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
......+.+++.+|++.||++|||+.|+++.
T Consensus 247 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 247 RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 1223467789999999999999999999873
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-36 Score=318.92 Aligned_cols=251 Identities=18% Similarity=0.236 Sum_probs=189.4
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCc----
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ---- 515 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~---- 515 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.++++++||||+++++++...+.
T Consensus 24 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 101 (353)
T 3coi_A 24 KTYV--SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101 (353)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred ceEE--EeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence 3455 778899999999999985 679999999997532 235678899999999999999999999987654
Q ss_pred --eeEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccc
Q 005177 516 --AYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 516 --~~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~ 593 (710)
.++||||++ |+|.+++....++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 177 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 177 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred eeEEEEecccc-CCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence 499999998 699999988889999999999999999999998 99999999999999999999999999987654
Q ss_pred ccCCCCcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc---------cccc--------
Q 005177 594 LADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI---------DGLL-------- 655 (710)
Q Consensus 594 ~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~---------~~~~-------- 655 (710)
..... ..+..+|.+||.... ..++.++|||||||++|||+||+.|+.+......... ....
T Consensus 178 ~~~~~-~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 256 (353)
T 3coi_A 178 AEMTG-YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAA 256 (353)
T ss_dssp -------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHH
T ss_pred CCccc-cccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHH
Confidence 32221 123455778887765 6788999999999999999999999875331100000 0000
Q ss_pred ----cccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 656 ----GEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 656 ----~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.....................+.+++.+|++.||++|||+.|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 257 KSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000000000001111223567789999999999999999999864
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=341.79 Aligned_cols=244 Identities=16% Similarity=0.175 Sum_probs=190.5
Q ss_pred hhhhhcCCCCCccEEEEcC----CCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~----~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
..+.||+|+||.||+|... .+..||||+++... ...+.+.+|+.++++++|||||+++|++. ++..++||||+
T Consensus 394 i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~~ 472 (656)
T 2j0j_A 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELC 472 (656)
T ss_dssp EEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred EeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEcC
Confidence 5678999999999999852 35689999987532 23567899999999999999999999985 46789999999
Q ss_pred CCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--
Q 005177 524 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 598 (710)
Q Consensus 524 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~-- 598 (710)
++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 473 ~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 549 (656)
T 2j0j_A 473 TLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 549 (656)
T ss_dssp TTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC------
T ss_pred CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecCCCcceec
Confidence 99999999974 468999999999999999999998 9999999999999999999999999999865432111
Q ss_pred -CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHH
Q 005177 599 -FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 676 (710)
Q Consensus 599 -~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (710)
...+...|.+||......++.++|||||||++|||++ |+.|+.+..... ....+........+. .....
T Consensus 550 ~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~------~~~~i~~~~~~~~~~---~~~~~ 620 (656)
T 2j0j_A 550 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND------VIGRIENGERLPMPP---NCPPT 620 (656)
T ss_dssp ----CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHHHHTCCCCCCT---TCCHH
T ss_pred cCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH------HHHHHHcCCCCCCCc---cccHH
Confidence 1112334778898888889999999999999999998 777876432111 111111111011111 12245
Q ss_pred HHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 677 VLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 677 ~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 621 l~~li~~~l~~dP~~RPs~~el~~~L~~il 650 (656)
T 2j0j_A 621 LYSLMTKCWAYDPSRRPRFTELKAQLSTIL 650 (656)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 678999999999999999999999998763
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-36 Score=321.73 Aligned_cols=254 Identities=17% Similarity=0.212 Sum_probs=185.6
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEcCCCcEEEEEEeeccch------------hHHHHHHHHHHHhccCCCCceeEEEE
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT------------RIKIVSEFITRIGTVRHKNLIRLLGF 509 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~------------~~~~~~~e~~~l~~l~H~niv~l~g~ 509 (710)
+.+.|. ..+.||+|+||.||+|...+|..||||++..... ..+.+.+|++++++++|||||+++++
T Consensus 20 ~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 97 (362)
T 3pg1_A 20 MQSPYT--VQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDI 97 (362)
T ss_dssp TTCSCE--EEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEE
T ss_pred hccceE--EeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeee
Confidence 345566 7889999999999999988899999999965321 13678999999999999999999999
Q ss_pred EEcC-----CceeEEEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCce
Q 005177 510 CYNR-----HQAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 581 (710)
Q Consensus 510 ~~~~-----~~~~lv~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ 581 (710)
+... ...++||||++ |+|.+.+.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+
T Consensus 98 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~ 173 (362)
T 3pg1_A 98 FVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNNDI 173 (362)
T ss_dssp EEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCE
T ss_pred EEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcCCCCE
Confidence 8643 35799999998 688888865 468999999999999999999999 99999999999999999999
Q ss_pred EEcccCccccccccCCC-CcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc-cc----
Q 005177 582 HLAEFGFKYLTQLADGS-FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GL---- 654 (710)
Q Consensus 582 kl~DfGla~~~~~~~~~-~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~-~~---- 654 (710)
||+|||+++........ ...+..+|.+||.... ..++.++||||+||++|||+||+.|+.+.......... ..
T Consensus 174 kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~ 253 (362)
T 3pg1_A 174 TICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTP 253 (362)
T ss_dssp EECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred EEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCC
Confidence 99999999754322211 1224455778887765 66889999999999999999999998743311100000 00
Q ss_pred ------------cccccccccc-CCCcch----HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 655 ------------LGEMYNENEV-GSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 655 ------------~~~~~~~~~~-~~~~~~----~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..+....... .....+ ......+.+++.+|++.||++|||+.|++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 254 KIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp CHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 0000000000 000001 1113457799999999999999999999874
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-36 Score=316.90 Aligned_cols=244 Identities=18% Similarity=0.233 Sum_probs=186.5
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhcc-CCCCceeEEEEEEc------CCc
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYN------RHQ 515 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~------~~~ 515 (710)
..|. ..+.||+|+||.||+|.. .+|+.||||.+.......+.+.+|++++.++ +||||+++++++.. .+.
T Consensus 24 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~ 101 (326)
T 2x7f_A 24 GIFE--LVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ 101 (326)
T ss_dssp TTEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCE
T ss_pred CcEE--EEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccce
Confidence 4455 778999999999999986 6899999999987666677889999999998 79999999999987 467
Q ss_pred eeEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 516 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
.++||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 178 (326)
T 2x7f_A 102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 178 (326)
T ss_dssp EEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCTTTC-
T ss_pred EEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCcCcee
Confidence 8999999999999999964 468888999999999999999998 999999999999999999999999999876
Q ss_pred ccccCC--CCcccccccCchhhhh-----ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccccccc
Q 005177 592 TQLADG--SFPAKIAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 664 (710)
Q Consensus 592 ~~~~~~--~~~~~~~~~~~~e~~~-----~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (710)
...... ....+...|.+||... ...++.++|||||||++|||+||+.|+.+...... .. .......+. .
T Consensus 179 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~-~~~~~~~~~-~ 254 (326)
T 2x7f_A 179 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA--LF-LIPRNPAPR-L 254 (326)
T ss_dssp ------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HH-HHHHSCCCC-C
T ss_pred cCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH--HH-HhhcCcccc-C
Confidence 532211 1112344577788765 45678899999999999999999999864321110 00 000000000 0
Q ss_pred CCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 665 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 665 ~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
..... ...+.+++.+||+.||++||++.|+++
T Consensus 255 -~~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 255 -KSKKW---SKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp -SCSCS---CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred -Ccccc---CHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 01111 245678889999999999999999986
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-35 Score=309.12 Aligned_cols=243 Identities=16% Similarity=0.176 Sum_probs=185.3
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-----hhHHHHHHHHHHHhccCCCCceeEEEEEEc--CC
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-----TRIKIVSEFITRIGTVRHKNLIRLLGFCYN--RH 514 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~ 514 (710)
.+.|. ..+.||+|+||.||++.. .+|..||||.++... ...+.+.+|++++++++||||+++++++.. .+
T Consensus 4 ~~~y~--i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (305)
T 2wtk_C 4 IGKYL--MGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQ 81 (305)
T ss_dssp -CCBC--CCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---
T ss_pred cccee--EeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCC
Confidence 34456 778999999999999986 678999999997642 235678999999999999999999999854 45
Q ss_pred ceeEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccc
Q 005177 515 QAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 590 (710)
Q Consensus 515 ~~~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~ 590 (710)
..++||||+++| +.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 82 ~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 82 KMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred eEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccc
Confidence 789999999976 6666643 568899999999999999999998 99999999999999999999999999987
Q ss_pred cccccCCC----CcccccccCchhhhhccC--CccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccccccc
Q 005177 591 LTQLADGS----FPAKIAWTESGEFYNAMK--EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 664 (710)
Q Consensus 591 ~~~~~~~~----~~~~~~~~~~~e~~~~~~--~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (710)
........ ...+...+.+||...... .+.++|||||||++|||+||+.|+....... ....+.... .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~i~~~~-~ 230 (305)
T 2wtk_C 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYK------LFENIGKGS-Y 230 (305)
T ss_dssp ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHCC-C
T ss_pred ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHH------HHHHHhcCC-C
Confidence 65321111 112344567788776543 3678999999999999999999986432110 011111111 1
Q ss_pred CCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 665 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 665 ~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..+.. ....+.+++.+|++.||++|||++|++++
T Consensus 231 ~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 231 AIPGD---CGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp CCCSS---SCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred CCCCc---cCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11111 12356688899999999999999999974
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-36 Score=327.24 Aligned_cols=243 Identities=17% Similarity=0.186 Sum_probs=181.1
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCC------ceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH------QAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~------~~~lv~Ey 522 (710)
..+.||+|+||.||+|.. .+|+.||||++.... +...+|++++++++|||||+++++|...+ ..++||||
T Consensus 58 ~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~ 134 (420)
T 1j1b_A 58 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY 134 (420)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEEC
T ss_pred eeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc---hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhc
Confidence 778999999999999986 579999999997543 23447999999999999999999986421 36799999
Q ss_pred cCCCChhhhhh------cCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC-CceEEcccCcccccccc
Q 005177 523 LPNGNLSEKIR------TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-MEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 523 ~~~gsL~~~l~------~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~-~~~kl~DfGla~~~~~~ 595 (710)
+++ ++.+.+. ..+++.....++.|+++||+|||+. +|+||||||+|||++.+ +.+||+|||+++.....
T Consensus 135 ~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~ 210 (420)
T 1j1b_A 135 VPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 210 (420)
T ss_dssp CCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred ccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhhhcccC
Confidence 985 6666553 2578899999999999999999998 99999999999999965 56899999999865322
Q ss_pred CCC-CcccccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc-c--------ccc-------cc
Q 005177 596 DGS-FPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-D--------GLL-------GE 657 (710)
Q Consensus 596 ~~~-~~~~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~-~--------~~~-------~~ 657 (710)
... ...++.+|.+||+..+. .++.++|||||||++|||++|+.||.+......... . ..+ .+
T Consensus 211 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~ 290 (420)
T 1j1b_A 211 EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 290 (420)
T ss_dssp CCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCC
T ss_pred CCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhh
Confidence 211 12245568888887554 689999999999999999999999875432110000 0 000 00
Q ss_pred cccccccCCCcchH-----HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 658 MYNENEVGSSSSLQ-----DEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 658 ~~~~~~~~~~~~~~-----~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
...+. .. ...+. .....+.+++.+|++.||++|||+.|++++
T Consensus 291 ~~~p~-~~-~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 291 FKFPQ-IK-AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp CCCCC-CC-CCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hccCc-cC-CCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 00000 00 01111 113567899999999999999999999864
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-36 Score=325.77 Aligned_cols=250 Identities=17% Similarity=0.194 Sum_probs=183.3
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCc------eeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ------AYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~------~~lv~Ey~ 523 (710)
..+.||+|+||.||+|....+..||+|++..... ...+|++++++++|||||++++++...+. .++||||+
T Consensus 44 ~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~---~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~ 120 (394)
T 4e7w_A 44 NCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR---FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYV 120 (394)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT---SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECC
T ss_pred EeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc---hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeecc
Confidence 7889999999999999987777799999875432 23468999999999999999999976443 78999999
Q ss_pred CCCChhhhh-----hcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec-CCCceEEcccCccccccccCC
Q 005177 524 PNGNLSEKI-----RTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-ENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 524 ~~gsL~~~l-----~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~-~~~~~kl~DfGla~~~~~~~~ 597 (710)
+++.+.... ...+++.....++.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+++.......
T Consensus 121 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~ 197 (394)
T 4e7w_A 121 PETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP 197 (394)
T ss_dssp SEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCC
T ss_pred CccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCC
Confidence 875433332 23678889999999999999999998 999999999999999 799999999999986533222
Q ss_pred C-CcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc-cc--------cc----ccccccc
Q 005177 598 S-FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-DG--------LL----GEMYNEN 662 (710)
Q Consensus 598 ~-~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~-~~--------~~----~~~~~~~ 662 (710)
. ...+..+|.+||...+ ..++.++||||+||++|||++|+.||.+......... .. .. .......
T Consensus 198 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~ 277 (394)
T 4e7w_A 198 NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHK 277 (394)
T ss_dssp CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSC
T ss_pred CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhc
Confidence 1 2224556788887754 4589999999999999999999999875432110000 00 00 0000000
Q ss_pred c-cCCCcchH-----HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH--Hhcc
Q 005177 663 E-VGSSSSLQ-----DEIKLVLDVALLCTRSTPSDRPSMEEALKL--LSGL 705 (710)
Q Consensus 663 ~-~~~~~~~~-----~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~--L~~~ 705 (710)
. ......+. .....+.+++.+||+.||++|||+.|++++ ++++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 328 (394)
T 4e7w_A 278 FPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL 328 (394)
T ss_dssp CCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTT
T ss_pred cccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhh
Confidence 0 00001111 123467899999999999999999999875 4444
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-36 Score=317.65 Aligned_cols=250 Identities=14% Similarity=0.168 Sum_probs=168.9
Q ss_pred hhhcCCchh-hhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEc----CCc
Q 005177 442 VLRSFNSTE-CEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN----RHQ 515 (710)
Q Consensus 442 ~~~~~~~~~-~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~ 515 (710)
+.+.|. . .++||+|+||.||+|.. .+|+.||||++.......+ +....+..++||||+++++++.. ++.
T Consensus 26 ~~~~y~--i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~---e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 100 (336)
T 3fhr_A 26 VTDDYQ--LSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ---EVDHHWQASGGPHIVCILDVYENMHHGKRC 100 (336)
T ss_dssp GGGTEE--EEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHHH---HHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred ccceeE--ecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHHH---HHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence 334454 4 34699999999999986 5799999999976433222 23334566789999999999876 445
Q ss_pred eeEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC---CCceEEcccCc
Q 005177 516 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLAEFGF 588 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~---~~~~kl~DfGl 588 (710)
.++||||+++|+|.+++.. .+++.++..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~ 177 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGF 177 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEecccc
Confidence 8999999999999999975 368999999999999999999999 9999999999999986 45599999999
Q ss_pred cccccccCCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCc
Q 005177 589 KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 668 (710)
Q Consensus 589 a~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (710)
++...........+...|.+||......++.++|||||||++|||+||+.|+........... ....+.........+
T Consensus 178 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~--~~~~~~~~~~~~~~~ 255 (336)
T 3fhr_A 178 AKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG--MKRRIRLGQYGFPNP 255 (336)
T ss_dssp CEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------CCCTT
T ss_pred ceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh--HHHhhhccccccCch
Confidence 976543322222345557788888777788899999999999999999999874332111000 000000000000011
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 669 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 669 ~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+......+.+++.+|++.||++|||+.|+++.
T Consensus 256 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 256 EWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 111223467789999999999999999999873
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-34 Score=310.30 Aligned_cols=287 Identities=20% Similarity=0.183 Sum_probs=207.7
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.++...+..|.++++|++|+
T Consensus 68 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 68 FRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEE
Confidence 66667777777666655555666666777777777766666666666667777777777666643333356666677777
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCc
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g 259 (710)
|++|.+++..|..|.++++|++|++++|.+++. .++.+++|+.|++++|.+++ +...++|+.|++++|.++.
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~l~~ 219 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINV 219 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE-----EECCSSCSEEECCSSCCCE
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccc-----cCCCCcceEEECCCCeeee
Confidence 777766666666666666777777776666543 24455666666666665543 2334567777888877764
Q ss_pred cCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCC
Q 005177 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (710)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 339 (710)
. |.. ..++|+.|++++|.+++. ..+..+++|+.|++++|.+++..|..|..+++|+.|+|++|++++ +|..+..
T Consensus 220 ~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~ 293 (390)
T 3o6n_A 220 V-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQP 293 (390)
T ss_dssp E-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSC
T ss_pred c-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCC
Confidence 3 322 246888899999888764 467888899999999999988888888889999999999998885 5667778
Q ss_pred CCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecccCCcccc
Q 005177 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGI 404 (710)
Q Consensus 340 l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~l~g~ 404 (710)
+++|++|++++|+++ .+|..+..+++|+.|++++|.++.. | +...+.|+.|++++|.+++.
T Consensus 294 l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 294 IPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp CTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHH
T ss_pred CCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccch
Confidence 889999999999888 5677778888899999999998753 3 56678889999999988864
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=318.77 Aligned_cols=251 Identities=18% Similarity=0.231 Sum_probs=190.0
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcC-----Cce
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR-----HQA 516 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-----~~~ 516 (710)
.|. ..+.||+|+||.||+|.. .+|..||||++.... ...+.+.+|++++.+++|||||++++++... ...
T Consensus 28 ~y~--~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 28 RYT--NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cEE--EEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 455 788999999999999985 678999999997532 2356788999999999999999999999764 368
Q ss_pred eEEEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 517 YLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 517 ~lv~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
++||||++ |+|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 106 ~iv~e~~~-~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 181 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181 (364)
T ss_dssp EEEEECCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCGG
T ss_pred EEEEcccC-cCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEecCCC
Confidence 99999998 599998875 578999999999999999999999 9999999999999999999999999999865432
Q ss_pred CC-----CCcccccccCchhhhh-ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc-cc--------ccc---
Q 005177 596 DG-----SFPAKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GL--------LGE--- 657 (710)
Q Consensus 596 ~~-----~~~~~~~~~~~~e~~~-~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~-~~--------~~~--- 657 (710)
.. ....++.+|.+||... ...++.++||||+||++|||+||+.||.+.......... .. ...
T Consensus 182 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 261 (364)
T 3qyz_A 182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261 (364)
T ss_dssp GCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCC
T ss_pred CCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 11 1112455577888654 445899999999999999999999998754322110000 00 000
Q ss_pred -----cccccccCCCcch----HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 658 -----MYNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 658 -----~~~~~~~~~~~~~----~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.....+......+ ......+.+++.+|++.||++|||+.|++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 262 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000000001 1123467899999999999999999999874
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-35 Score=311.28 Aligned_cols=248 Identities=19% Similarity=0.241 Sum_probs=180.0
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEE--------------cC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCY--------------NR 513 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~--------------~~ 513 (710)
..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++||||+++++++. +.
T Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~ 94 (320)
T 2i6l_A 15 DLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTEL 94 (320)
T ss_dssp EEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSC
T ss_pred EEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccccccc
Confidence 778999999999999986 469999999997643 34567889999999999999999999884 34
Q ss_pred CceeEEEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec-CCCceEEcccCcccc
Q 005177 514 HQAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-ENMEPHLAEFGFKYL 591 (710)
Q Consensus 514 ~~~~lv~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~-~~~~~kl~DfGla~~ 591 (710)
+..++||||++ |+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++ +++.+||+|||+++.
T Consensus 95 ~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~ 170 (320)
T 2i6l_A 95 NSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARI 170 (320)
T ss_dssp SEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEECCCTTCBC
T ss_pred CceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEccCccccc
Confidence 67899999998 699999876 568888999999999999999998 999999999999998 567999999999986
Q ss_pred ccccCC-----CCcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc-cc--------ccc
Q 005177 592 TQLADG-----SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-DG--------LLG 656 (710)
Q Consensus 592 ~~~~~~-----~~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~-~~--------~~~ 656 (710)
...... ....+..++.+||.... ..++.++|||||||++|||+||+.|+........... .. ...
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (320)
T 2i6l_A 171 MDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQ 250 (320)
T ss_dssp C--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHH
T ss_pred cCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhh
Confidence 532111 11113445777786654 6788999999999999999999999875432110000 00 000
Q ss_pred cc-------ccccccCCCcch----HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 657 EM-------YNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 657 ~~-------~~~~~~~~~~~~----~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+. ............ ......+.+++.+|++.||++|||+.|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 251 ELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred hhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 00 000000000000 1123567889999999999999999999863
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=329.59 Aligned_cols=252 Identities=12% Similarity=0.056 Sum_probs=192.1
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCC-CceeEEEEEEcCCceeEEEe
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHK-NLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~-niv~l~g~~~~~~~~~lv~E 521 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||.+..... ...+.+|++++..++|+ +|..+..++.+.+..++|||
T Consensus 7 ~~y~--i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 7 NKFR--LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTEE--CCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CcEE--EEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 3455 778999999999999985 7899999998875432 34577899999999874 55556666677888999999
Q ss_pred ecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe---cCCCceEEcccCcccccccc
Q 005177 522 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 522 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl---~~~~~~kl~DfGla~~~~~~ 595 (710)
|+ +|+|.+++.. .+++.++..|+.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99 8999999963 678999999999999999999998 99999999999999 68899999999999865432
Q ss_pred CCC---------CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCC
Q 005177 596 DGS---------FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS 666 (710)
Q Consensus 596 ~~~---------~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (710)
... ...+...|.+||......++.++|||||||++|||++|+.||.+........ ....+........
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~---~~~~i~~~~~~~~ 236 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQ---KYEKISEKKVATS 236 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHH---HHHHHHHHHHHSC
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHH---HHHHHhhcccccc
Confidence 211 1224455778898888889999999999999999999999997533211100 0011110000000
Q ss_pred Cc-chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 667 SS-SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 667 ~~-~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
.. .......++.+++..||+.+|++||++.++++.|+.+
T Consensus 237 ~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 237 IEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp HHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred HHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 00 0011124678899999999999999999999998876
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-36 Score=317.54 Aligned_cols=245 Identities=18% Similarity=0.256 Sum_probs=184.3
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.||+|+||.||+|.... .||||.++... ...+.+.+|++++++++||||+++++++.+++..++||||+++|
T Consensus 37 ~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~ 114 (319)
T 2y4i_B 37 IGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGR 114 (319)
T ss_dssp CCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSE
T ss_pred EeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCC
Confidence 67899999999999998643 49999997532 22456778999999999999999999999999999999999999
Q ss_pred Chhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC-------
Q 005177 527 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD------- 596 (710)
Q Consensus 527 sL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~------- 596 (710)
+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++ ++.+||+|||+++......
T Consensus 115 ~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~ 190 (319)
T 2y4i_B 115 TLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDK 190 (319)
T ss_dssp EHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC----------CCS
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccccccccccccccc
Confidence 99999976 468899999999999999999998 999999999999998 6799999999987542111
Q ss_pred CCCcccccccCchhhhhc---------cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCC
Q 005177 597 GSFPAKIAWTESGEFYNA---------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSS 667 (710)
Q Consensus 597 ~~~~~~~~~~~~~e~~~~---------~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (710)
.....+...|.+||.... ..++.++|||||||++|||+||+.|+....... .... ......+. .. .
T Consensus 191 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~~-~~~~~~~~-~~-~ 265 (319)
T 2y4i_B 191 LRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA--IIWQ-MGTGMKPN-LS-Q 265 (319)
T ss_dssp CBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH--HHHH-HHTTCCCC-CC-C
T ss_pred cccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHH-hccCCCCC-CC-c
Confidence 011123444677787653 346888999999999999999999986432110 0000 00000111 00 0
Q ss_pred cchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCCC
Q 005177 668 SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 708 (710)
Q Consensus 668 ~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~ 708 (710)
. .....+.+++.+||+.||++|||+.|++++|+.+.+.
T Consensus 266 ~---~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 266 I---GMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp S---SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred C---CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 0 0113466888999999999999999999999998753
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=314.11 Aligned_cols=256 Identities=16% Similarity=0.205 Sum_probs=195.5
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc--CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCC------ceeEEEEEEcCCc
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL--PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKN------LIRLLGFCYNRHQ 515 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~--~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~n------iv~l~g~~~~~~~ 515 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||.++......+.+.+|++++++++|+| ++++++++.+.+.
T Consensus 14 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 14 ARYE--IVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTEE--EEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred CceE--EEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 3455 778999999999999985 57899999999876555677889999999887765 9999999999999
Q ss_pred eeEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC--------------
Q 005177 516 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-------------- 577 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~-------------- 577 (710)
.++||||+ +|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 8899999865 357889999999999999999998 9999999999999987
Q ss_pred -----CCceEEcccCccccccccCCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccc-c
Q 005177 578 -----NMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP-I 651 (710)
Q Consensus 578 -----~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~-~ 651 (710)
++.+||+|||+++........ ..++..|.+||......++.++|||||||++|||+||+.|+.......... .
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~~~~-~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 246 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEHHST-LVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMM 246 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSCCCS-SCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHH
T ss_pred cccccCCCceEeeCcccccCcccccc-ccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 668999999999865433222 224455788898888889999999999999999999999987432211000 0
Q ss_pred cccc-------------cccccc---cccC-----------------CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 005177 652 DGLL-------------GEMYNE---NEVG-----------------SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEA 698 (710)
Q Consensus 652 ~~~~-------------~~~~~~---~~~~-----------------~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~ev 698 (710)
.... ...... .+.. ...........+.+++.+|++.||++|||+.|+
T Consensus 247 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~el 326 (339)
T 1z57_A 247 ERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREA 326 (339)
T ss_dssp HHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHH
Confidence 0000 000000 0000 000011234668899999999999999999999
Q ss_pred HHH--HhccC
Q 005177 699 LKL--LSGLK 706 (710)
Q Consensus 699 l~~--L~~~~ 706 (710)
+++ ++.++
T Consensus 327 l~hp~f~~~~ 336 (339)
T 1z57_A 327 LKHPFFDLLK 336 (339)
T ss_dssp TTSGGGGGGG
T ss_pred hcCHHHHHHh
Confidence 864 44443
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=327.40 Aligned_cols=304 Identities=22% Similarity=0.200 Sum_probs=236.6
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEc
Q 005177 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L 180 (710)
+.+++|||++|.+++..+..|.++++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..|+++++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 46899999999999888889999999999999999999988899999999999999999999888899999999999999
Q ss_pred cCCCCCCCCCcccCCCCCCCeEEecCCcCCC-CCcccccccccccccccccccccccCCccccCC---------------
Q 005177 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLND-QIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNM--------------- 244 (710)
Q Consensus 181 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l--------------- 244 (710)
++|++++..+..++++++|++|++++|.+++ .+|..++++++|++|++++|.+++..|..++.+
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 9999997666679999999999999999987 579999999999999999998765544333322
Q ss_pred --------------------------------------------------------------------------------
Q 005177 245 -------------------------------------------------------------------------------- 244 (710)
Q Consensus 245 -------------------------------------------------------------------------------- 244 (710)
T Consensus 188 ~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~ 267 (570)
T 2z63_A 188 PMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYL 267 (570)
T ss_dssp CCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEET
T ss_pred CceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcc
Confidence
Q ss_pred --------------CccchhccccccCCccCchhc------------------------------------------cCC
Q 005177 245 --------------SEVQYLDIAGANLSGSIPKEL------------------------------------------SNL 268 (710)
Q Consensus 245 --------------~~L~~L~ls~n~l~g~~p~~l------------------------------------------~~l 268 (710)
++|+.|++++|.+++ +|..+ ..+
T Consensus 268 ~~~~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~ 346 (570)
T 2z63_A 268 DYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDL 346 (570)
T ss_dssp TEEESCSTTTTGGGTTCSEEEEESCEECS-CCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBC
T ss_pred hhhhhhchhhhcCcCcccEEEecCccchh-hhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccC
Confidence 334444444444431 22211 345
Q ss_pred CCCcEEEccccccCCCC--CccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCC-cccCCCCCCcE
Q 005177 269 TKLESLFLFRNQLAGQV--PWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVP-ESLVQLPSLEI 345 (710)
Q Consensus 269 ~~L~~L~L~~n~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~ 345 (710)
++|+.|++++|.+++.. |..+..+++|++|++++|.+.+..+ .+..+++|+.|++++|.+.+..| ..+..+++|++
T Consensus 347 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 425 (570)
T 2z63_A 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 425 (570)
T ss_dssp TTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCE
T ss_pred CCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCE
Confidence 77888888888887643 5666777788888888887775433 37777777777777777776554 45667777777
Q ss_pred EeccCCCCCCCCCcccCCCCCCcEEECCCCcCC-ccCcccccCCCceeeEecccCCcccchh
Q 005177 346 LFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFN-GSIPPDICSGGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 346 L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~-g~ip~~~~~~~~L~~l~l~~N~l~g~i~ 406 (710)
|++++|.+++..|..+..+++|+.|++++|.++ +.+|..+..+++|+.|++++|++++..|
T Consensus 426 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~ 487 (570)
T 2z63_A 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSP 487 (570)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECT
T ss_pred EeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCCh
Confidence 777777777767777777777777777777776 5667777777777777777777776654
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-35 Score=320.02 Aligned_cols=196 Identities=18% Similarity=0.181 Sum_probs=163.6
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccC-CC-----CceeEEEEEEcCCc
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR-HK-----NLIRLLGFCYNRHQ 515 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~-H~-----niv~l~g~~~~~~~ 515 (710)
.+.|. ..+.||+|+||.||+|.. .+|+.||||+++......+.+..|+++++.++ |+ +|+++++++..++.
T Consensus 53 ~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 130 (382)
T 2vx3_A 53 MDRYE--IDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH 130 (382)
T ss_dssp TTTEE--EEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred eeeEE--EEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence 44555 778999999999999985 57899999999866555667778888888775 44 49999999999999
Q ss_pred eeEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec--CCCceEEcccCcc
Q 005177 516 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD--ENMEPHLAEFGFK 589 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~--~~~~~kl~DfGla 589 (710)
.++||||++ |+|.+++.. .+++..+..++.|++.||+|||++ ..+|+||||||+|||++ .++.+||+|||++
T Consensus 131 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 131 LCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred eEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 999999996 599999865 368999999999999999999952 23899999999999995 5788999999999
Q ss_pred ccccccCCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCC
Q 005177 590 YLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAG 643 (710)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~ 643 (710)
+........ ..++.+|.+||+.....++.++|||||||++|||+||+.||.+.
T Consensus 209 ~~~~~~~~~-~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 209 CQLGQRIYQ-YIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp EETTCCCCS-SCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eeccccccc-ccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 876433222 22445578889988888999999999999999999999998743
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=318.04 Aligned_cols=252 Identities=19% Similarity=0.212 Sum_probs=188.5
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcC-----Cc
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR-----HQ 515 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-----~~ 515 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||++.... .....+.+|++++++++||||+++++++... ..
T Consensus 11 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 11 SDFQ--LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred cceE--EeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 4455 778999999999999986 579999999997532 2356678999999999999999999998764 67
Q ss_pred eeEEEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccc
Q 005177 516 AYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 594 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~ 594 (710)
.++||||++ |+|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 89 ~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164 (353)
T ss_dssp EEEEECCCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EEEEEeccC-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccccccc
Confidence 899999998 699998865 578999999999999999999998 999999999999999999999999999876532
Q ss_pred cCCC------------CcccccccCchhhhh-ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccc-----------
Q 005177 595 ADGS------------FPAKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP----------- 650 (710)
Q Consensus 595 ~~~~------------~~~~~~~~~~~e~~~-~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~----------- 650 (710)
.... ...++.+|.+||... ...++.++|||||||++|||++|+.|+.+........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 244 (353)
T 2b9h_A 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244 (353)
T ss_dssp ---------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCS
T ss_pred ccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCch
Confidence 1110 011344577788654 4678899999999999999999999987433110000
Q ss_pred ---cc----ccccccccccccCCCcch----HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 651 ---ID----GLLGEMYNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 651 ---~~----~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.. ....+............. ......+.+++.+|++.||++|||+.|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp TTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00 000000000000000000 1123467789999999999999999999874
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-35 Score=312.66 Aligned_cols=243 Identities=19% Similarity=0.198 Sum_probs=169.4
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHH-HHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFIT-RIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~-~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.||+|+||.||+|.. .+|+.||||++.... .....+..|+. +++.++||||+++++++.+++..++||||+++
T Consensus 26 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~ 105 (327)
T 3aln_A 26 DLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST 105 (327)
T ss_dssp C-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE
T ss_pred ehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC
Confidence 678899999999999986 579999999998642 22334444544 77888999999999999999999999999985
Q ss_pred CChhhhhh-------cCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC
Q 005177 526 GNLSEKIR-------TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 598 (710)
Q Consensus 526 gsL~~~l~-------~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 598 (710)
+|.+++. ...++....+++.|+++||+|||+. ++|+||||||+||+++.++.+||+|||+++........
T Consensus 106 -~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 182 (327)
T 3aln_A 106 -SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK 182 (327)
T ss_dssp -EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSCC-------
T ss_pred -ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCceeccccccc
Confidence 8877764 2568899999999999999999985 28999999999999999999999999998765432211
Q ss_pred -CcccccccCchhhh----hccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccC-CCcchHH
Q 005177 599 -FPAKIAWTESGEFY----NAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG-SSSSLQD 672 (710)
Q Consensus 599 -~~~~~~~~~~~e~~----~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 672 (710)
...+...+.+||.. ....++.++|||||||++|||+||+.|+.......... .++....... .......
T Consensus 183 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 257 (327)
T 3aln_A 183 TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQL-----TQVVKGDPPQLSNSEERE 257 (327)
T ss_dssp -----------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------CCCCCSCCCCCCCCSSCC
T ss_pred ccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHH-----HHHhcCCCCCCCCccccc
Confidence 11234446778876 45568889999999999999999999987433211111 1111111000 0000011
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 673 EIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
....+.+++.+||+.||++|||+.|+++
T Consensus 258 ~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 258 FSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 2345778999999999999999999875
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-35 Score=323.07 Aligned_cols=240 Identities=18% Similarity=0.193 Sum_probs=179.1
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEEeecCCCCh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
..+.||+|+||+||.+...+|+.||||++.... .+.+.+|++++.++ +|||||++++++.+++..++|||||. |+|
T Consensus 19 ~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL 95 (434)
T 2rio_A 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF--CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNL 95 (434)
T ss_dssp EEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG--HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEH
T ss_pred ccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCH
Confidence 457899999999987666789999999997543 34577899999876 89999999999999999999999996 699
Q ss_pred hhhhhcCC---------CHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC-------------CceEEccc
Q 005177 529 SEKIRTKR---------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-------------MEPHLAEF 586 (710)
Q Consensus 529 ~~~l~~~~---------~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~-------------~~~kl~Df 586 (710)
.+++.... .+..+..++.|++.||+|||+. +|+||||||+|||++.+ +.+||+||
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF 172 (434)
T 2rio_A 96 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172 (434)
T ss_dssp HHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred HHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence 99997532 1223467999999999999998 99999999999999754 48999999
Q ss_pred CccccccccCCC------CcccccccCchhhhhc-------cCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccc
Q 005177 587 GFKYLTQLADGS------FPAKIAWTESGEFYNA-------MKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPID 652 (710)
Q Consensus 587 Gla~~~~~~~~~------~~~~~~~~~~~e~~~~-------~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~ 652 (710)
|+++........ ...++..|.+||+... ..++.++|||||||++|||+| |+.|+.+......
T Consensus 173 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~---- 248 (434)
T 2rio_A 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES---- 248 (434)
T ss_dssp TTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH----
T ss_pred ccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH----
Confidence 999875432211 1124455778887754 568889999999999999999 8888764322110
Q ss_pred ccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 653 GLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
............. ..........+.+++.+|++.||++|||+.|+++
T Consensus 249 ~i~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 249 NIIRGIFSLDEMK-CLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHHHTCCCCCCCT-TCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHhcCCCCccccc-ccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 0111111111011 1112344567889999999999999999999985
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-35 Score=314.09 Aligned_cols=237 Identities=16% Similarity=0.145 Sum_probs=188.2
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-------hHHHHHHHHHHHhccC--CCCceeEEEEEEcC
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-------RIKIVSEFITRIGTVR--HKNLIRLLGFCYNR 513 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-------~~~~~~~e~~~l~~l~--H~niv~l~g~~~~~ 513 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||.++.... ..+.+.+|++++++++ ||||+++++++.++
T Consensus 43 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 43 SQYQ--VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp TTEE--EEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred CceE--EEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 3455 778999999999999984 7899999999986432 2345677899999986 59999999999999
Q ss_pred CceeEEEeecCC-CChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec-CCCceEEcccCcc
Q 005177 514 HQAYLLYDYLPN-GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-ENMEPHLAEFGFK 589 (710)
Q Consensus 514 ~~~~lv~Ey~~~-gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~-~~~~~kl~DfGla 589 (710)
+..++||||+.+ ++|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++ +++.+||+|||++
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~ 197 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSG 197 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred CcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCccc
Confidence 999999999986 899999865 578899999999999999999998 999999999999999 7899999999998
Q ss_pred ccccccCCCCcccccccCchhhhhccCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCc
Q 005177 590 YLTQLADGSFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 668 (710)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (710)
+...........+...|.+||......+ +.++|||||||++|||+||+.|+...... .... .....
T Consensus 198 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~------------~~~~-~~~~~ 264 (320)
T 3a99_A 198 ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI------------IRGQ-VFFRQ 264 (320)
T ss_dssp EECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH------------HHCC-CCCSS
T ss_pred cccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh------------hccc-ccccc
Confidence 8764332222224445778887766554 67899999999999999999998632210 0000 00011
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 669 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 669 ~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.. ...+.+++.+||+.||++|||+.|+++.
T Consensus 265 ~~---~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 265 RV---SSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp CC---CHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cC---CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11 2356788999999999999999999874
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-35 Score=309.29 Aligned_cols=252 Identities=20% Similarity=0.273 Sum_probs=186.8
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc--CCCcEEEEEEeeccch---hHHHHHHHHHHHhcc---CCCCceeEEEEEE----
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL--PTGITVSVKKIEWGAT---RIKIVSEFITRIGTV---RHKNLIRLLGFCY---- 511 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~--~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l---~H~niv~l~g~~~---- 511 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||+++.... ....+.+|+++++++ +||||++++++|.
T Consensus 11 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 11 QQYE--CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GTEE--EEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred hcee--eeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 3455 778999999999999986 5789999999975322 133456677766655 8999999999997
Q ss_pred -cCCceeEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEccc
Q 005177 512 -NRHQAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEF 586 (710)
Q Consensus 512 -~~~~~~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df 586 (710)
.....++||||++ |+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecC
Confidence 4567899999998 699999865 368899999999999999999998 9999999999999999999999999
Q ss_pred CccccccccCC-CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCC---------------ccc
Q 005177 587 GFKYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKP 650 (710)
Q Consensus 587 Gla~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~---------------~~~ 650 (710)
|+++....... ....+...+.+||......++.++|||||||++|||+||+.|+.+..... .|.
T Consensus 165 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 244 (326)
T 1blx_A 165 GLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244 (326)
T ss_dssp CSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSC
T ss_pred cccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCc
Confidence 99876542211 11223445778898888888999999999999999999999987433211 010
Q ss_pred ccccc-cccccccccCC-CcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 651 IDGLL-GEMYNENEVGS-SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 651 ~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..... ........... ..........+.+++.+||+.||++|||+.|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp TTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000 00000000000 00001123456789999999999999999999864
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-35 Score=306.18 Aligned_cols=231 Identities=15% Similarity=0.178 Sum_probs=174.9
Q ss_pred hhhhhcCCchhh-hhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHH-hccCCCCceeEEEEEEc----
Q 005177 440 NDVLRSFNSTEC-EEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRI-GTVRHKNLIRLLGFCYN---- 512 (710)
Q Consensus 440 ~~~~~~~~~~~~-~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l-~~l~H~niv~l~g~~~~---- 512 (710)
.++...|. .. +.||+|+||.||+|.. .+|+.||||.++.. ..+.+|++++ +..+||||+++++++..
T Consensus 13 ~~~~~~y~--~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~ 86 (299)
T 3m2w_A 13 NAIIDDYK--VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYAG 86 (299)
T ss_dssp SCGGGTEE--EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred cccccchh--hcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCC
Confidence 34445554 44 6799999999999985 67999999999743 3566777777 56689999999999976
Q ss_pred CCceeEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC---CCceEEcc
Q 005177 513 RHQAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLAE 585 (710)
Q Consensus 513 ~~~~~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~---~~~~kl~D 585 (710)
++..++||||+++|+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~D 163 (299)
T 3m2w_A 87 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTD 163 (299)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred CceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEec
Confidence 6678999999999999999975 368999999999999999999998 9999999999999998 78899999
Q ss_pred cCccccccccCCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccC
Q 005177 586 FGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 665 (710)
Q Consensus 586 fGla~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (710)
||+++.... ..++.++||||+||++|||+||+.|+........... ....+.......
T Consensus 164 fg~a~~~~~--------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~--~~~~~~~~~~~~ 221 (299)
T 3m2w_A 164 FGFAKETTG--------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG--MKTRIRMGQYEF 221 (299)
T ss_dssp CTTCEECTT--------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CC--SCCSSCTTCCSS
T ss_pred ccccccccc--------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHH--HHHHHhhccccC
Confidence 998764321 2346678999999999999999999874332111000 001111111000
Q ss_pred CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 666 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 666 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
...........+.+++.+|++.||++|||+.|++++
T Consensus 222 ~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 222 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 001111223567789999999999999999999874
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=323.65 Aligned_cols=290 Identities=17% Similarity=0.113 Sum_probs=262.5
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
++.++.|++++|.+....+..+.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 78999999999999865555678899999999999999999888999999999999999999998888999999999999
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCc
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g 259 (710)
|++|.+++..+..|+++++|++|+|++|.+++..|..++.+++|++|++++|.+++. .++.+++|+.|++++|.+++
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST 206 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEECCSSCCSE
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---ChhhhhhhhhhhcccCcccc
Confidence 999999976666689999999999999999999999999999999999999999874 35678899999999999875
Q ss_pred cCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCC
Q 005177 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (710)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 339 (710)
+...++|+.|++++|.++...+.. .++|+.|+|++|.+++ +.++..+++|+.|+|++|.+++..|..+..
T Consensus 207 -----l~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 276 (597)
T 3oja_B 207 -----LAIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVK 276 (597)
T ss_dssp -----EECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTT
T ss_pred -----ccCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcC
Confidence 344578999999999997544332 3689999999999997 478999999999999999999999999999
Q ss_pred CCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecccCCcccc
Q 005177 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGI 404 (710)
Q Consensus 340 l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~l~g~ 404 (710)
+++|+.|+|++|.+++ +|..+..+++|+.|++++|.++ .+|..+..++.|+.|++++|++++.
T Consensus 277 l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~ 339 (597)
T 3oja_B 277 MQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL 339 (597)
T ss_dssp CSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC
T ss_pred ccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc
Confidence 9999999999999996 6777888999999999999999 6899999999999999999999875
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-35 Score=316.95 Aligned_cols=248 Identities=15% Similarity=0.168 Sum_probs=188.4
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccC-----------CCCceeEEEEEEcCC---
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR-----------HKNLIRLLGFCYNRH--- 514 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~-----------H~niv~l~g~~~~~~--- 514 (710)
..+.||+|+||.||+|.. .+|+.||||.+.......+.+.+|++++.+++ ||||+++++++...+
T Consensus 23 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 102 (373)
T 1q8y_A 23 LVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNG 102 (373)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTE
T ss_pred EEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCC
Confidence 778999999999999985 78999999999876666777888999988876 899999999998654
Q ss_pred -ceeEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec------CCCceEE
Q 005177 515 -QAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD------ENMEPHL 583 (710)
Q Consensus 515 -~~~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~------~~~~~kl 583 (710)
..++||||+ +|+|.+++.. ..++.....++.|++.||+|||+.+ +|+||||||+|||++ ..+.+||
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~~~~~kl 179 (373)
T 1q8y_A 103 VHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKI 179 (373)
T ss_dssp EEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTTEEEEEE
T ss_pred ceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcCcceEEE
Confidence 789999999 8899999864 4788999999999999999999853 899999999999994 4458999
Q ss_pred cccCccccccccCCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccc------
Q 005177 584 AEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGE------ 657 (710)
Q Consensus 584 ~DfGla~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~------ 657 (710)
+|||+++......... .++..|.+||......++.++|||||||++|||+||+.||................+
T Consensus 180 ~Dfg~a~~~~~~~~~~-~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 258 (373)
T 1q8y_A 180 ADLGNACWYDEHYTNS-IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLG 258 (373)
T ss_dssp CCCTTCEETTBCCCSC-CSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHC
T ss_pred cccccccccCCCCCCC-CCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcC
Confidence 9999998765332222 244557888988888899999999999999999999999874321100000000000
Q ss_pred ---------------ccccc---------ccC--------CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 658 ---------------MYNEN---------EVG--------SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 658 ---------------~~~~~---------~~~--------~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.++.. ... ...........+.+++.+||+.||++|||+.|++++
T Consensus 259 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 334 (373)
T 1q8y_A 259 ELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 334 (373)
T ss_dssp SCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred CCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhC
Confidence 00000 000 001123455678899999999999999999999874
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=304.64 Aligned_cols=242 Identities=16% Similarity=0.150 Sum_probs=185.3
Q ss_pred cCCchhhhhhcCCCCCccEEEEcCCCcEEEEEEeecc---chhHHHHHHHHHHHhccCC--CCceeEEEEEEcCCceeEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRH--KNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H--~niv~l~g~~~~~~~~~lv 519 (710)
.|. ..+.||+|+||.||++...+|+.||||.+... ....+.+.+|++++.+++| |||+++++++.+++..++|
T Consensus 29 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 106 (313)
T 3cek_A 29 IYS--ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 106 (313)
T ss_dssp EEE--EEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred eEE--EEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence 355 77899999999999999888999999999753 2345678899999999984 9999999999999999999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
|| +.+|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||++++ +.+||+|||+++.......
T Consensus 107 ~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~ 181 (313)
T 3cek_A 107 ME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTT 181 (313)
T ss_dssp EC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC------
T ss_pred Ee-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccccCccc
Confidence 99 567899999975 568889999999999999999998 9999999999999975 8999999999876543221
Q ss_pred C----CcccccccCchhhhhc-----------cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccccc
Q 005177 598 S----FPAKIAWTESGEFYNA-----------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN 662 (710)
Q Consensus 598 ~----~~~~~~~~~~~e~~~~-----------~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 662 (710)
. ...+...|.+||.... ..++.++|||||||++|||+||+.|+........ ......++.
T Consensus 182 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-----~~~~~~~~~ 256 (313)
T 3cek_A 182 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS-----KLHAIIDPN 256 (313)
T ss_dssp --------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH-----HHHHHHCTT
T ss_pred cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHH-----HHHHHHhcc
Confidence 1 1123445777887654 4678899999999999999999999864322110 011111111
Q ss_pred cc-CCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 663 EV-GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 663 ~~-~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.. ..+... ...+.+++.+||+.||++||++.|+++.
T Consensus 257 ~~~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 257 HEIEFPDIP---EKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp SCCCCCCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccCCcccc---hHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 00 001111 2356788899999999999999999864
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=311.60 Aligned_cols=239 Identities=16% Similarity=0.150 Sum_probs=182.4
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-------hHHHHHHHHHHHhcc----CCCCceeEEEE
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-------RIKIVSEFITRIGTV----RHKNLIRLLGF 509 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-------~~~~~~~e~~~l~~l----~H~niv~l~g~ 509 (710)
+.+.|. ..+.||+|+||.||+|.. .+|+.||||.+..... ....+.+|++++.++ +||||++++++
T Consensus 29 ~~~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 29 FEAEYR--LGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ----CE--EEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhceE--EeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 344566 788999999999999985 6789999999975422 233456788888888 89999999999
Q ss_pred EEcCCceeEEEee-cCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec-CCCceEEcc
Q 005177 510 CYNRHQAYLLYDY-LPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-ENMEPHLAE 585 (710)
Q Consensus 510 ~~~~~~~~lv~Ey-~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~-~~~~~kl~D 585 (710)
+.+.+..++|||| +++++|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++ .++.+||+|
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~d 183 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLID 183 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEECC
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEEEE
Confidence 9999999999999 789999999965 578999999999999999999998 999999999999999 889999999
Q ss_pred cCccccccccCCCCcccccccCchhhhhccCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccccccc
Q 005177 586 FGFKYLTQLADGSFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 664 (710)
Q Consensus 586 fGla~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (710)
||+++...........+...+.+||......+ +.++|||||||++|||+||+.|+...... .... .
T Consensus 184 fg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------------~~~~-~ 250 (312)
T 2iwi_A 184 FGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI------------LEAE-L 250 (312)
T ss_dssp CSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH------------HHTC-C
T ss_pred cchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHH------------hhhc-c
Confidence 99988764332222224445778887765554 45899999999999999999998632110 0010 0
Q ss_pred CCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 665 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 665 ~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..... ....+.+++.+|++.||++|||+.|+++.
T Consensus 251 ~~~~~---~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 251 HFPAH---VSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp CCCTT---SCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred CCccc---CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00111 12356788999999999999999999874
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-35 Score=306.91 Aligned_cols=244 Identities=15% Similarity=0.167 Sum_probs=170.2
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 520 (710)
.|. ..+.||+|+||.||+|.. .+|+.||||.+..... ..+.+.++..+++.++||||+++++++.+++..++||
T Consensus 26 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 26 DLE--NLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GEE--EEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred ccc--ccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 355 678899999999999986 5799999999986432 2344555666788899999999999999999999999
Q ss_pred eecCCCChhhhhh---cCCCHHHHHHHHHHHHHHHHHHhc-CCCCCceecCCCCCCeEecCCCceEEcccCccccccccC
Q 005177 521 DYLPNGNLSEKIR---TKRDWAAKYKIVLGVARGLCFLHH-DCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 521 Ey~~~gsL~~~l~---~~~~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 596 (710)
||+ ++.+..+.. ...++..+..++.|+++||+|||+ . +|+||||||+||+++.++.+||+|||+++......
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 999 445554443 357889999999999999999998 5 89999999999999999999999999987653221
Q ss_pred CC-CcccccccCchhhhh-----ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcch
Q 005177 597 GS-FPAKIAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 670 (710)
Q Consensus 597 ~~-~~~~~~~~~~~e~~~-----~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (710)
.. ...+...+.+||... ...++.++|||||||++|||+||+.|+........ ....+....... .+..
T Consensus 180 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-----~~~~~~~~~~~~-~~~~ 253 (318)
T 2dyl_A 180 AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFE-----VLTKVLQEEPPL-LPGH 253 (318)
T ss_dssp -------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHH-----HHHHHHHSCCCC-CCSS
T ss_pred cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHH-----HHHHHhccCCCC-CCcc
Confidence 11 112344467788763 45678899999999999999999999874322111 011111111000 0000
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 671 QDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 671 ~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
......+.+++.+||+.||++||++.|+++
T Consensus 254 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 254 MGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp SCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 011245678889999999999999999876
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=310.27 Aligned_cols=251 Identities=16% Similarity=0.174 Sum_probs=190.7
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCC-cEEEEEEeeccchhHHHHHHHHHHHhccCCCC------ceeEEEEEEcCCc
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTG-ITVSVKKIEWGATRIKIVSEFITRIGTVRHKN------LIRLLGFCYNRHQ 515 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g-~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~n------iv~l~g~~~~~~~ 515 (710)
+.|. ..+.||+|+||.||+|.. .++ ..||||.++......+.+.+|++++++++|++ ++.+++++...+.
T Consensus 19 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 19 ERYE--IVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTEE--EEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred ccEE--EEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 3455 778999999999999985 344 79999999876556777889999999998877 9999999999999
Q ss_pred eeEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe----------------
Q 005177 516 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---------------- 575 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl---------------- 575 (710)
.++||||+ +|++.+++.. ..++..+..++.|+++||+|||+. +|+||||||+|||+
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 5677777653 468999999999999999999998 99999999999999
Q ss_pred ---cCCCceEEcccCccccccccCCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc-
Q 005177 576 ---DENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI- 651 (710)
Q Consensus 576 ---~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~- 651 (710)
+.++.+||+|||+++........ ..++..|.+||......++.++|||||||++|||+||+.|+...........
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~~~~-~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 251 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEHHTT-IVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMM 251 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSCCCS-SCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred ccccCCCcEEEeecCccccccccccC-CcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 66789999999999865433222 2244557788988888899999999999999999999999874332110000
Q ss_pred cccc-------------ccc-ccccccC-------------------CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 005177 652 DGLL-------------GEM-YNENEVG-------------------SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEA 698 (710)
Q Consensus 652 ~~~~-------------~~~-~~~~~~~-------------------~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~ev 698 (710)
.... ... ....... ...........+.+++.+||+.||++|||+.|+
T Consensus 252 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~ 331 (355)
T 2eu9_A 252 EKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEA 331 (355)
T ss_dssp HHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHH
Confidence 0000 000 0000000 000011234567899999999999999999999
Q ss_pred HHH
Q 005177 699 LKL 701 (710)
Q Consensus 699 l~~ 701 (710)
+++
T Consensus 332 l~h 334 (355)
T 2eu9_A 332 LLH 334 (355)
T ss_dssp TTS
T ss_pred hcC
Confidence 853
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-35 Score=319.78 Aligned_cols=238 Identities=17% Similarity=0.184 Sum_probs=174.6
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEEeecCCCCh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
..+.||+|+||.||.....+|+.||||++.... ...+.+|+++++++ +|||||++++++.+++..|+|||||+ |+|
T Consensus 28 ~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L 104 (432)
T 3p23_A 28 PKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC--FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATL 104 (432)
T ss_dssp EEEEEEECGGGCEEEEEESSSSEEEEEEECTTT--EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEH
T ss_pred cCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCH
Confidence 778999999999665555689999999997532 23356789999998 79999999999999999999999997 699
Q ss_pred hhhhhcC---CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC-----CCceEEcccCccccccccCC---
Q 005177 529 SEKIRTK---RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-----NMEPHLAEFGFKYLTQLADG--- 597 (710)
Q Consensus 529 ~~~l~~~---~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~-----~~~~kl~DfGla~~~~~~~~--- 597 (710)
.+++... ..+.....++.|+++||+|||+. +|+||||||+|||++. ...+||+|||+++.......
T Consensus 105 ~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~ 181 (432)
T 3p23_A 105 QEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFS 181 (432)
T ss_dssp HHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--------
T ss_pred HHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCccee
Confidence 9999752 34445678999999999999998 9999999999999943 34688999999986542211
Q ss_pred --CCcccccccCchhhhh---ccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchH
Q 005177 598 --SFPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 671 (710)
Q Consensus 598 --~~~~~~~~~~~~e~~~---~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (710)
....++.+|.+||+.. ...++.++|||||||++|||+| |+.|+........ ....... ...... . ..
T Consensus 182 ~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~---~~~~~~~-~~~~~~-~--~~ 254 (432)
T 3p23_A 182 RRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA---NILLGAC-SLDCLH-P--EK 254 (432)
T ss_dssp ----CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH---HHHTTCC-CCTTSC-T--TC
T ss_pred eccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH---HHHhccC-CccccC-c--cc
Confidence 1112455577888776 4567789999999999999999 7777643221110 0000000 000011 1 11
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 672 DEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 672 ~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
.....+.+++.+|++.||++|||+.||++
T Consensus 255 ~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 255 HEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp HHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 23345678999999999999999999984
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=304.34 Aligned_cols=297 Identities=16% Similarity=0.148 Sum_probs=255.8
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEE
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 155 (710)
.++.++++++.+++. | .+.. +++|++|+|++|.+++. | ++.+++|++|+|++|.+++. | ++++++|++|+
T Consensus 43 ~L~~L~Ls~n~l~~~-~-~l~~--l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~ 112 (457)
T 3bz5_A 43 TLTSLDCHNSSITDM-T-GIEK--LTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLN 112 (457)
T ss_dssp TCCEEECCSSCCCCC-T-TGGG--CTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEE
T ss_pred CCCEEEccCCCcccC-h-hhcc--cCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEE
Confidence 477899999999874 4 5666 89999999999999874 4 88999999999999999975 4 89999999999
Q ss_pred CCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccc
Q 005177 156 AFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG 235 (710)
Q Consensus 156 L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g 235 (710)
+++|.+++ +| ++++++|++|++++|++++. | ++++++|++|++++|...+.+ .++.+++|+.|++++|.+++
T Consensus 113 L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~ 184 (457)
T 3bz5_A 113 CDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE 184 (457)
T ss_dssp CCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC
T ss_pred CCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce
Confidence 99999997 45 89999999999999999974 3 889999999999999776666 47889999999999999987
Q ss_pred cCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccC
Q 005177 236 NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFAD 315 (710)
Q Consensus 236 ~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 315 (710)
+| ++.+++|+.|++++|++++. .++.+++|+.|++++|++++ +| +..+++|+.|++++|++++..+..+.+
T Consensus 185 -l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~ 255 (457)
T 3bz5_A 185 -LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSK 255 (457)
T ss_dssp -CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTT
T ss_pred -ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCC
Confidence 55 88899999999999999975 38889999999999999998 56 788999999999999999876666655
Q ss_pred CC-------CCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcc--------cCCCCCCcEEECCCCcCCcc
Q 005177 316 LK-------NLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPEN--------LGRNSKLRWVDVSTNNFNGS 380 (710)
Q Consensus 316 l~-------~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~--------l~~~~~L~~L~ls~N~l~g~ 380 (710)
++ +|+.|++++|.+.+.+| +..+++|+.|++++|.+.|.+|.. ++.+++|+.|++++|+++|
T Consensus 256 L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~- 332 (457)
T 3bz5_A 256 LTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTE- 332 (457)
T ss_dssp CCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSC-
T ss_pred CCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCcccc-
Confidence 54 56777777777777776 567899999999999988777642 5566889999999999998
Q ss_pred CcccccCCCceeeEecccCCcccc
Q 005177 381 IPPDICSGGVLFKLILFSNNFTGI 404 (710)
Q Consensus 381 ip~~~~~~~~L~~l~l~~N~l~g~ 404 (710)
+| ++.++.|+.|++++|++++.
T Consensus 333 l~--l~~l~~L~~L~l~~N~l~~l 354 (457)
T 3bz5_A 333 LD--VSHNTKLKSLSCVNAHIQDF 354 (457)
T ss_dssp CC--CTTCTTCSEEECCSSCCCBC
T ss_pred cc--cccCCcCcEEECCCCCCCCc
Confidence 43 88899999999999999983
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-32 Score=289.53 Aligned_cols=268 Identities=20% Similarity=0.241 Sum_probs=181.0
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
.+.|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.++ .+|..+. ++|++|+
T Consensus 53 ~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~ 129 (332)
T 2ft3_A 53 SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELR 129 (332)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEE
T ss_pred CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEE
Confidence 357888888888888777778888888888888888888888888888888888888888887 5666555 7888888
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCCcCC--CCCcccccccccccccccccccccccCCccccCCCccchhccccccC
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLN--DQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANL 257 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l 257 (710)
+++|++++..+..|.++++|+.|++++|.++ +..|..+..+ +|+.|++++|.+++ +|..+. ++|++|++++|++
T Consensus 130 l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i 205 (332)
T 2ft3_A 130 IHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKI 205 (332)
T ss_dssp CCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCC
T ss_pred CCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcC
Confidence 8888888766667888888888888888885 3556666666 67777777776664 444433 5666666666666
Q ss_pred CccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCccc
Q 005177 258 SGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESL 337 (710)
Q Consensus 258 ~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 337 (710)
++..+..+..+++|+.|++++|.+++..+..+..+++|+.|++++|+++ .+|..+..+++|+.|++++|++++..+..+
T Consensus 206 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~ 284 (332)
T 2ft3_A 206 QAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDF 284 (332)
T ss_dssp CCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSS
T ss_pred CccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHc
Confidence 6655566666666666666666666655555666666666666666665 455556666666666666666665444444
Q ss_pred CC------CCCCcEEeccCCCCC--CCCCcccCCCCCCcEEECCCC
Q 005177 338 VQ------LPSLEILFIWNNYFS--GSLPENLGRNSKLRWVDVSTN 375 (710)
Q Consensus 338 ~~------l~~L~~L~L~~N~l~--g~~p~~l~~~~~L~~L~ls~N 375 (710)
.. .++|+.|++++|.+. +..|..+..+++|+.+++++|
T Consensus 285 ~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n 330 (332)
T 2ft3_A 285 CPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNY 330 (332)
T ss_dssp SCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC---
T ss_pred cccccccccccccceEeecCcccccccCcccccccchhhhhhcccc
Confidence 32 234555555555544 334444444555555555444
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=325.88 Aligned_cols=251 Identities=14% Similarity=0.084 Sum_probs=187.1
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEc------C
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYN------R 513 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~------~ 513 (710)
...|. ..+.||+|+||.||+|.. .+|..||||+++.. ....+.+.+|++++++++|||||++++++.. +
T Consensus 13 ~grY~--i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~ 90 (676)
T 3qa8_A 13 CGPWE--MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPN 90 (676)
T ss_dssp ----C--CCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTT
T ss_pred CCCeE--EEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCC
Confidence 34566 788999999999999986 67999999998753 2346678899999999999999999999765 6
Q ss_pred CceeEEEeecCCCChhhhhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc---eEEcc
Q 005177 514 HQAYLLYDYLPNGNLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME---PHLAE 585 (710)
Q Consensus 514 ~~~~lv~Ey~~~gsL~~~l~~-----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~---~kl~D 585 (710)
+..++||||+++|+|.+++.. .+++..+..|+.|++.||+|||+. +|+||||||+||+++.++. +||+|
T Consensus 91 ~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~D 167 (676)
T 3qa8_A 91 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIID 167 (676)
T ss_dssp SSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECS
T ss_pred CeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcc
Confidence 678999999999999999975 467888999999999999999998 9999999999999997664 99999
Q ss_pred cCccccccccCCC-CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc------------
Q 005177 586 FGFKYLTQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID------------ 652 (710)
Q Consensus 586 fGla~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~------------ 652 (710)
||+++........ ...+...|.+||...+..++.++|||||||++|||+||+.||........|...
T Consensus 168 FG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~ 247 (676)
T 3qa8_A 168 LGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVY 247 (676)
T ss_dssp CCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSC
T ss_pred cccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhh
Confidence 9999875432211 112444577888888888999999999999999999999998753221111100
Q ss_pred c-cccccccccccCCC-cchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 005177 653 G-LLGEMYNENEVGSS-SSLQDEIKLVLDVALLCTRSTPSDRPSMEEA 698 (710)
Q Consensus 653 ~-~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~ev 698 (710)
. ......-......+ .........+.+++.+|++.||++|||+.|+
T Consensus 248 ~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 248 DDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp CCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred hhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 0 00000000000101 1112244567889999999999999999773
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-34 Score=331.51 Aligned_cols=236 Identities=15% Similarity=0.168 Sum_probs=184.4
Q ss_pred hcCCchhhhhhcCCCCCccEEEEcC--CCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCc----
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVLP--TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ---- 515 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~~--~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~---- 515 (710)
..|. ..+.||+|+||.||+|... +|+.||||++.... ...+.+.+|++++++++|||||++++++.+.+.
T Consensus 80 ~~y~--i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 80 GQYE--VKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp TTEE--EEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred CceE--EEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 3455 7789999999999999864 68999999986532 335678899999999999999999999988665
Q ss_pred -eeEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccc
Q 005177 516 -AYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 594 (710)
Q Consensus 516 -~~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~ 594 (710)
.|+||||+++|+|.+++...++|.++..|+.|+++||+|||+. +|+||||||+|||++.+ .+||+|||+++....
T Consensus 158 ~~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS 233 (681)
T ss_dssp EEEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred eeEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchhccc
Confidence 7999999999999999988899999999999999999999998 99999999999999986 899999999986543
Q ss_pred cCCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 595 ADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 595 ~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
. ....++..|.+||+.... ++.++|||||||++|||++|..|+.+... ... ..........
T Consensus 234 ~--~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~----------~~~------~~~~~~~~~~ 294 (681)
T 2pzi_A 234 F--GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYV----------DGL------PEDDPVLKTY 294 (681)
T ss_dssp C--SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEEC----------SSC------CTTCHHHHHC
T ss_pred C--CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccc----------ccc------cccccccccC
Confidence 2 222244557788877654 48899999999999999999877653110 000 0011112233
Q ss_pred HHHHHHHhhcCCCCCCCCCC-HHHHHHHHhc
Q 005177 675 KLVLDVALLCTRSTPSDRPS-MEEALKLLSG 704 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs-~~evl~~L~~ 704 (710)
..+.+++.+|++.||++||+ ++++...|..
T Consensus 295 ~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 295 DSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp HHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred HHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 56778999999999999995 5555555543
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-32 Score=290.18 Aligned_cols=288 Identities=23% Similarity=0.275 Sum_probs=254.3
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEcc
Q 005177 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (710)
Q Consensus 102 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~ 181 (710)
+++.+++++|.++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 4778888888886 6777664 789999999999998888899999999999999999999889999999999999999
Q ss_pred CCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccccccccccccccccccc--ccCCccccCCCccchhccccccCCc
Q 005177 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQ--GNIPWQLGNMSEVQYLDIAGANLSG 259 (710)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~--g~~p~~l~~l~~L~~L~ls~n~l~g 259 (710)
+|+++ .+|..+. ++|++|++++|.+++..+..+..+++|+.|++++|.++ +..|..+..+ +|++|++++|++++
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 99998 5777665 89999999999999777777999999999999999996 4677788888 99999999999986
Q ss_pred cCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCC
Q 005177 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (710)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 339 (710)
+|..+. ++|+.|++++|.+++..+..+..+++|+.|++++|++++..|..+..+++|+.|++++|+++ .+|..+..
T Consensus 187 -l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 262 (332)
T 2ft3_A 187 -IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPD 262 (332)
T ss_dssp -CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGG
T ss_pred -cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhc
Confidence 565554 79999999999999988889999999999999999999988889999999999999999999 78999999
Q ss_pred CCCCcEEeccCCCCCCCCCcccCC------CCCCcEEECCCCcCC--ccCcccccCCCceeeEecccCC
Q 005177 340 LPSLEILFIWNNYFSGSLPENLGR------NSKLRWVDVSTNNFN--GSIPPDICSGGVLFKLILFSNN 400 (710)
Q Consensus 340 l~~L~~L~L~~N~l~g~~p~~l~~------~~~L~~L~ls~N~l~--g~ip~~~~~~~~L~~l~l~~N~ 400 (710)
+++|++|++++|++++..+..+.. ..+|+.+++++|.+. +..|..+..++.|+.+++++|+
T Consensus 263 l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 263 LKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred CccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 999999999999999776666654 367899999999987 5667778889999999998875
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-32 Score=287.24 Aligned_cols=269 Identities=22% Similarity=0.250 Sum_probs=179.5
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEc
Q 005177 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L 180 (710)
+.|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.++ .+|..+. ++|++|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEEC
Confidence 46788888888888766667888888888888888888777888888888888888888877 4565554 67888888
Q ss_pred cCCCCCCCCCcccCCCCCCCeEEecCCcCCC--CCcccccccccccccccccccccccCCccccCCCccchhccccccCC
Q 005177 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLND--QIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS 258 (710)
Q Consensus 181 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~ 258 (710)
++|.+++..+..|.++++|++|++++|.+.. ..|..+.. +++|++|++++|+++
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~------------------------l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQG------------------------MKKLSYIRIADTNIT 184 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGG------------------------CTTCCEEECCSSCCC
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccC------------------------CCCcCEEECCCCccc
Confidence 8888877666677778888888888777743 34444444 445555555555554
Q ss_pred ccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccC
Q 005177 259 GSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLV 338 (710)
Q Consensus 259 g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 338 (710)
. +|..+. ++|++|++++|.+++..|..+..+++|+.|++++|++++..+..+..+++|+.|++++|+++ .+|..+.
T Consensus 185 ~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~ 260 (330)
T 1xku_A 185 T-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLA 260 (330)
T ss_dssp S-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTT
T ss_pred c-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhc
Confidence 2 333322 56666666666666666666666666666666666666655556666666777777776666 5666666
Q ss_pred CCCCCcEEeccCCCCCCCCCcccCC------CCCCcEEECCCCcCCc--cCcccccCCCceeeEecccCC
Q 005177 339 QLPSLEILFIWNNYFSGSLPENLGR------NSKLRWVDVSTNNFNG--SIPPDICSGGVLFKLILFSNN 400 (710)
Q Consensus 339 ~l~~L~~L~L~~N~l~g~~p~~l~~------~~~L~~L~ls~N~l~g--~ip~~~~~~~~L~~l~l~~N~ 400 (710)
.+++|++|++++|++++..+..+.. ...++.+++++|.+.. ..|..+..+..++.+++++|+
T Consensus 261 ~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 261 DHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp TCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred cCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 6677777777777766554444432 2567777777777652 334556666777777777764
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-32 Score=289.62 Aligned_cols=302 Identities=21% Similarity=0.317 Sum_probs=256.7
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEE
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 155 (710)
.++.++++++.+.. ++ .+.. +++|++|+|++|.+++. |. +.++++|++|+|++|.+++ +| .+.++++|++|+
T Consensus 45 ~L~~L~l~~~~i~~-~~-~~~~--~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~ 116 (347)
T 4fmz_A 45 SITKLVVAGEKVAS-IQ-GIEY--LTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELY 116 (347)
T ss_dssp TCSEEECCSSCCCC-CT-TGGG--CTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEE
T ss_pred cccEEEEeCCcccc-ch-hhhh--cCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEE
Confidence 46778888877754 33 3555 89999999999999854 44 8999999999999999986 34 699999999999
Q ss_pred CCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccc
Q 005177 156 AFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG 235 (710)
Q Consensus 156 L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g 235 (710)
+++|.+++. |. +..+++|++|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|+.|++++|.+.+
T Consensus 117 l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~ 191 (347)
T 4fmz_A 117 LNEDNISDI-SP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED 191 (347)
T ss_dssp CTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC
T ss_pred CcCCcccCc-hh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc
Confidence 999999864 44 8999999999999997765554 48999999999999999876544 8899999999999999875
Q ss_pred cCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccC
Q 005177 236 NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFAD 315 (710)
Q Consensus 236 ~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 315 (710)
..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|.+++. ..+..
T Consensus 192 ~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~ 263 (347)
T 4fmz_A 192 ISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKD 263 (347)
T ss_dssp CGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTT
T ss_pred ccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhc
Confidence 433 7889999999999999986554 8889999999999999986544 88899999999999999864 56889
Q ss_pred CCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEe
Q 005177 316 LKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLI 395 (710)
Q Consensus 316 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~ 395 (710)
+++|+.|++++|++++. ..+..+++|+.|++++|.+++..|..+..+++|+.|++++|.+++..| +..++.|+.|+
T Consensus 264 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 339 (347)
T 4fmz_A 264 LTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSAD 339 (347)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEES
T ss_pred CCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceee
Confidence 99999999999999864 468889999999999999998888889999999999999999997666 78889999999
Q ss_pred cccCCcc
Q 005177 396 LFSNNFT 402 (710)
Q Consensus 396 l~~N~l~ 402 (710)
+++|.++
T Consensus 340 l~~N~i~ 346 (347)
T 4fmz_A 340 FANQVIK 346 (347)
T ss_dssp SSCC---
T ss_pred hhhhccc
Confidence 9999875
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-32 Score=300.74 Aligned_cols=301 Identities=26% Similarity=0.349 Sum_probs=183.0
Q ss_pred EEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEEC
Q 005177 77 VVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDA 156 (710)
Q Consensus 77 v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L 156 (710)
+..++++++.+.+..+ +.. +++|++|+|++|.+.+..| +.++++|++|+|++|.+++..+ +.++++|++|++
T Consensus 70 L~~L~Ls~n~l~~~~~--~~~--l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l 141 (466)
T 1o6v_A 70 LTQINFSNNQLTDITP--LKN--LTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLEL 141 (466)
T ss_dssp CCEEECCSSCCCCCGG--GTT--CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEE
T ss_pred CCEEECCCCccCCchh--hhc--cccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEEC
Confidence 4445555555443322 333 4555555555555543332 5555555555555555554322 555555555555
Q ss_pred CCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccccccccccccccccccccc
Q 005177 157 FSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGN 236 (710)
Q Consensus 157 ~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~ 236 (710)
++|.+++ +| .+.++++|++|+++ |.+.+. + .+.++++|+.|++++|.+++. ..+..+++|++|++++|.+.+.
T Consensus 142 ~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~-~-~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~ 214 (466)
T 1o6v_A 142 SSNTISD-IS-ALSGLTSLQQLSFG-NQVTDL-K-PLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDI 214 (466)
T ss_dssp EEEEECC-CG-GGTTCTTCSEEEEE-ESCCCC-G-GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCC
T ss_pred CCCccCC-Ch-hhccCCcccEeecC-CcccCc-h-hhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccc
Confidence 5555543 22 24444444444443 223221 1 266667777777777776543 2366677777777777776655
Q ss_pred CCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCC
Q 005177 237 IPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADL 316 (710)
Q Consensus 237 ~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 316 (710)
.| ++.+++|+.|++++|++++. ..+..+++|+.|++++|.+++..| +..+++|+.|++++|++++..+ +..+
T Consensus 215 ~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l 286 (466)
T 1o6v_A 215 TP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGL 286 (466)
T ss_dssp GG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTC
T ss_pred cc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCC
Confidence 44 55667777777777776643 346667777777777777765544 6667777777777777775443 6677
Q ss_pred CCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEec
Q 005177 317 KNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLIL 396 (710)
Q Consensus 317 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l 396 (710)
++|+.|++++|++++..| +..+++|+.|++++|++++..| +..+++|+.|++++|.+++. +.+..+++|+.|++
T Consensus 287 ~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l 360 (466)
T 1o6v_A 287 TALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSA 360 (466)
T ss_dssp TTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEEC
T ss_pred CccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeC
Confidence 777777777777775433 6667777777777777776554 56677777777777777754 35667777777777
Q ss_pred ccCCcccchh
Q 005177 397 FSNNFTGIVM 406 (710)
Q Consensus 397 ~~N~l~g~i~ 406 (710)
++|++++..|
T Consensus 361 ~~n~l~~~~~ 370 (466)
T 1o6v_A 361 GHNQISDLTP 370 (466)
T ss_dssp CSSCCCBCGG
T ss_pred CCCccCccch
Confidence 7777777665
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-32 Score=301.46 Aligned_cols=301 Identities=28% Similarity=0.416 Sum_probs=264.0
Q ss_pred CcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEE
Q 005177 75 TIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVL 154 (710)
Q Consensus 75 ~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L 154 (710)
.....++++.+.+.+..+ +.. +++|++|+|++|.+++..+ +.++++|++|++++|.+++ +| .++.+++|++|
T Consensus 90 ~~L~~L~l~~n~l~~~~~--~~~--l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L 161 (466)
T 1o6v_A 90 TKLVDILMNNNQIADITP--LAN--LTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQL 161 (466)
T ss_dssp TTCCEEECCSSCCCCCGG--GTT--CTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEE
T ss_pred ccCCEEECCCCccccChh--hcC--CCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEe
Confidence 357888999998886544 666 8999999999999986533 8999999999999999986 34 58999999999
Q ss_pred ECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccccccccccccccccccc
Q 005177 155 DAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQ 234 (710)
Q Consensus 155 ~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~ 234 (710)
+++ |.+.+.. .+.++++|++|++++|.+++. ..+..+++|++|++++|.+++..| ++.+++|+.|++++|.+.
T Consensus 162 ~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~ 234 (466)
T 1o6v_A 162 SFG-NQVTDLK--PLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK 234 (466)
T ss_dssp EEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCC
T ss_pred ecC-CcccCch--hhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcc
Confidence 996 5666433 399999999999999999853 358899999999999999988766 788999999999999987
Q ss_pred ccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCcccc
Q 005177 235 GNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFA 314 (710)
Q Consensus 235 g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 314 (710)
+. ..+..+++|+.|++++|.+++..| +..+++|+.|++++|.+++..+ +..+++|+.|++++|++.+..| +.
T Consensus 235 ~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~ 306 (466)
T 1o6v_A 235 DI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--IS 306 (466)
T ss_dssp CC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GG
T ss_pred cc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hc
Confidence 63 357889999999999999997655 8899999999999999997554 7889999999999999998655 88
Q ss_pred CCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeE
Q 005177 315 DLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKL 394 (710)
Q Consensus 315 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l 394 (710)
.+++|+.|++++|++++..| +..+++|+.|++++|.+++. ..+..+++|+.|++++|++++..| +..++.|+.|
T Consensus 307 ~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 380 (466)
T 1o6v_A 307 NLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQL 380 (466)
T ss_dssp GCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEE
T ss_pred CCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEE
Confidence 99999999999999998766 78999999999999999975 478999999999999999998877 8889999999
Q ss_pred ecccCCcccc
Q 005177 395 ILFSNNFTGI 404 (710)
Q Consensus 395 ~l~~N~l~g~ 404 (710)
++++|.+++.
T Consensus 381 ~l~~n~~~~~ 390 (466)
T 1o6v_A 381 GLNDQAWTNA 390 (466)
T ss_dssp ECCCEEEECC
T ss_pred eccCCcccCC
Confidence 9999999983
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-32 Score=285.29 Aligned_cols=283 Identities=19% Similarity=0.261 Sum_probs=208.4
Q ss_pred CCceeeeeeeCCC---------CCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEE
Q 005177 61 YACSWSGVKCNKN---------NTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLD 131 (710)
Q Consensus 61 ~~C~w~gv~C~~~---------~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 131 (710)
..|.|..+.|... ...++.++++++.+.+..+..+.. +++|++|+|++|.+++..|..|.++++|++|+
T Consensus 29 c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~--l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (330)
T 1xku_A 29 CQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKN--LKNLHTLILINNKISKISPGAFAPLVKLERLY 106 (330)
T ss_dssp CEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTT--CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhcc--CCCCCEEECCCCcCCeeCHHHhcCCCCCCEEE
Confidence 4578999999742 124678999999998876667777 89999999999999988899999999999999
Q ss_pred CcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCC--CCCCcccCCCCCCCeEEecCCcC
Q 005177 132 ISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFS--GPIPSQFGSFKSLEFLHLAGNLL 209 (710)
Q Consensus 132 Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~--~~~p~~~~~l~~L~~L~L~~N~l 209 (710)
|++|.++ .+|..+. ++|++|++++|.+++..+..+.++++|++|++++|.++ +..+..+.++++|++|++++|.+
T Consensus 107 Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l 183 (330)
T 1xku_A 107 LSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI 183 (330)
T ss_dssp CCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCC
T ss_pred CCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcc
Confidence 9999998 5666554 89999999999999888888999999999999999996 37788899999999999999998
Q ss_pred CCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccc
Q 005177 210 NDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEF 289 (710)
Q Consensus 210 ~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~ 289 (710)
+. +|..+. + +|++|++++|++++..|..+..+++|+.|++++|.+++..+..+
T Consensus 184 ~~-l~~~~~--~------------------------~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 236 (330)
T 1xku_A 184 TT-IPQGLP--P------------------------SLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSL 236 (330)
T ss_dssp CS-CCSSCC--T------------------------TCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTG
T ss_pred cc-CCcccc--c------------------------cCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhc
Confidence 74 444332 3 45555555555555555556666666666666666665555556
Q ss_pred cCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCC------CCCCcEEeccCCCCCC--CCCccc
Q 005177 290 SRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ------LPSLEILFIWNNYFSG--SLPENL 361 (710)
Q Consensus 290 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~------l~~L~~L~L~~N~l~g--~~p~~l 361 (710)
..+++|+.|++++|+++ .+|..+..+++|++|++++|++++..+..+.. .+.|+.|++++|.+.. ..|..+
T Consensus 237 ~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f 315 (330)
T 1xku_A 237 ANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTF 315 (330)
T ss_dssp GGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGG
T ss_pred cCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCcccc
Confidence 66666666666666665 45666666666666666666666544444432 3567777777777652 445666
Q ss_pred CCCCCCcEEECCCCc
Q 005177 362 GRNSKLRWVDVSTNN 376 (710)
Q Consensus 362 ~~~~~L~~L~ls~N~ 376 (710)
..+.+++.+++++|+
T Consensus 316 ~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 316 RCVYVRAAVQLGNYK 330 (330)
T ss_dssp TTCCCGGGEEC----
T ss_pred ccccceeEEEecccC
Confidence 667777777777764
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-32 Score=310.44 Aligned_cols=302 Identities=20% Similarity=0.186 Sum_probs=244.1
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEE
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 155 (710)
..+.++|+.+.+++..+..+.. +++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|+++++|++|+
T Consensus 77 ~L~~L~Ls~N~i~~i~~~~f~~--L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~ 154 (635)
T 4g8a_A 77 ELQVLDLSRCEIQTIEDGAYQS--LSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 154 (635)
T ss_dssp TCCEEECTTCCCCEECTTTTTT--CTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred CCCEEECCCCcCCCcChhHhcC--CCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeec
Confidence 4678899999998766666777 89999999999999977777899999999999999999988888899999999999
Q ss_pred CCCCCCCc-CCchhccCCCCCCEEEccCCCCCCCCCcccCCC--------------------------------------
Q 005177 156 AFSNSFSG-SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSF-------------------------------------- 196 (710)
Q Consensus 156 L~~N~l~~-~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l-------------------------------------- 196 (710)
|++|.+++ .+|..++++++|++|+|++|++++..|..|..+
T Consensus 155 Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n 234 (635)
T 4g8a_A 155 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNN 234 (635)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESC
T ss_pred cccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcc
Confidence 99999986 578999999999999999998876544332211
Q ss_pred --------------------------------------------------------------------------------
Q 005177 197 -------------------------------------------------------------------------------- 196 (710)
Q Consensus 197 -------------------------------------------------------------------------------- 196 (710)
T Consensus 235 ~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 314 (635)
T 4g8a_A 235 FDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLV 314 (635)
T ss_dssp CSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEE
T ss_pred cccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccc
Confidence
Q ss_pred -------------CCCCeEEecCCcCCCCCcc-------------------cccccccccccccccccccc---------
Q 005177 197 -------------KSLEFLHLAGNLLNDQIPA-------------------ELGMLKTVTHMEIGYNFYQG--------- 235 (710)
Q Consensus 197 -------------~~L~~L~L~~N~l~~~~p~-------------------~l~~l~~L~~L~l~~n~~~g--------- 235 (710)
.+|+.|++.+|.+.+..+. ....+++|+.++++.|.+..
T Consensus 315 ~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~ 394 (635)
T 4g8a_A 315 SVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDF 394 (635)
T ss_dssp SCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHH
T ss_pred ccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccchh
Confidence 1222333333322211111 11234455566665554421
Q ss_pred ----------------------------------------cC-CccccCCCccchhccccccCCccCchhccCCCCCcEE
Q 005177 236 ----------------------------------------NI-PWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESL 274 (710)
Q Consensus 236 ----------------------------------------~~-p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L 274 (710)
.. +..+..+++++.++++.|.+.+..|..+..+++|+.|
T Consensus 395 ~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L 474 (635)
T 4g8a_A 395 GTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 474 (635)
T ss_dssp SCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred hhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhh
Confidence 11 1234566778888888999998889899999999999
Q ss_pred EccccccC-CCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCC
Q 005177 275 FLFRNQLA-GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYF 353 (710)
Q Consensus 275 ~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l 353 (710)
++++|++. +..|..|..+++|+.|+|++|++++..|..|.++++|++|+|++|++++..|..+..+++|++|+|++|++
T Consensus 475 ~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l 554 (635)
T 4g8a_A 475 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHI 554 (635)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCC
T ss_pred hhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcC
Confidence 99999854 45788899999999999999999999999999999999999999999998889999999999999999999
Q ss_pred CCCCCcccCCC-CCCcEEECCCCcCCc
Q 005177 354 SGSLPENLGRN-SKLRWVDVSTNNFNG 379 (710)
Q Consensus 354 ~g~~p~~l~~~-~~L~~L~ls~N~l~g 379 (710)
++..|..+..+ ++|+.|++++|.++.
T Consensus 555 ~~~~~~~l~~l~~~L~~L~L~~Np~~C 581 (635)
T 4g8a_A 555 MTSKKQELQHFPSSLAFLNLTQNDFAC 581 (635)
T ss_dssp CBCCSSCTTCCCTTCCEEECTTCCBCC
T ss_pred CCCCHHHHHhhhCcCCEEEeeCCCCcc
Confidence 99999999888 689999999999874
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-31 Score=297.02 Aligned_cols=284 Identities=19% Similarity=0.183 Sum_probs=246.7
Q ss_pred CcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccC
Q 005177 92 PGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQ 171 (710)
Q Consensus 92 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~ 171 (710)
+..+.. +++|++|+|++|.+++. | .+..+++|++|+|++|++++. | ++.+++|++|++++|.+++. | +++
T Consensus 35 ~~~~~~--l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~ 104 (457)
T 3bz5_A 35 TISEEQ--LATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTP 104 (457)
T ss_dssp EEEHHH--HTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTT
T ss_pred ccChhH--cCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCC
Confidence 334555 89999999999999974 6 799999999999999999984 4 89999999999999999974 4 899
Q ss_pred CCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhc
Q 005177 172 LEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLD 251 (710)
Q Consensus 172 L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ 251 (710)
+++|++|++++|++++ +| ++.+++|++|++++|.+++. | ++.+++|+.|+++.|...+.+ .++.+++|++|+
T Consensus 105 l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ 176 (457)
T 3bz5_A 105 LTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLD 176 (457)
T ss_dssp CTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEE
T ss_pred CCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEE
Confidence 9999999999999997 45 89999999999999999984 3 889999999999999877777 478999999999
Q ss_pred cccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcc
Q 005177 252 IAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSG 331 (710)
Q Consensus 252 ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 331 (710)
+++|++++ +| +..+++|+.|++++|++++. .+..+++|+.|++++|++++ +| ++.+++|+.|++++|++++
T Consensus 177 ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~ 247 (457)
T 3bz5_A 177 CSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTE 247 (457)
T ss_dssp CCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC
T ss_pred CCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCC
Confidence 99999997 45 88899999999999999975 37889999999999999998 66 8899999999999999998
Q ss_pred cCCcccCCCC-------CCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCccc--------ccCCCceeeEec
Q 005177 332 TVPESLVQLP-------SLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPD--------ICSGGVLFKLIL 396 (710)
Q Consensus 332 ~~p~~~~~l~-------~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~--------~~~~~~L~~l~l 396 (710)
..+..+..+. +|+.|++++|.+.|.+| ++.+++|+.|++++|.+.|.+|.. +...+.|+.|++
T Consensus 248 ~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L 325 (457)
T 3bz5_A 248 LDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYL 325 (457)
T ss_dssp CCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEEC
T ss_pred cCHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEEC
Confidence 6555554444 56677777777777776 567899999999999999888853 445678899999
Q ss_pred ccCCcccc
Q 005177 397 FSNNFTGI 404 (710)
Q Consensus 397 ~~N~l~g~ 404 (710)
++|+++|.
T Consensus 326 ~~N~l~~l 333 (457)
T 3bz5_A 326 NNTELTEL 333 (457)
T ss_dssp TTCCCSCC
T ss_pred CCCccccc
Confidence 99999984
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.98 E-value=4.3e-33 Score=304.36 Aligned_cols=231 Identities=19% Similarity=0.125 Sum_probs=169.9
Q ss_pred hhhhhcCCCCCccEEEE-cCCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCC-CCce----------e--------
Q 005177 450 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRH-KNLI----------R-------- 505 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~-~~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H-~niv----------~-------- 505 (710)
..+.||+|+||.||+|. ..+|+.||||++.... ...+.+.+|+.+++.++| +|.. .
T Consensus 82 ~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (413)
T 3dzo_A 82 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ 161 (413)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC
T ss_pred EecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCC
Confidence 56789999999999999 5789999999998422 225678999999999987 3211 1
Q ss_pred ---EEEEEEc-----CCceeEEEeecCCCChhhhhh---------cCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCC
Q 005177 506 ---LLGFCYN-----RHQAYLLYDYLPNGNLSEKIR---------TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDL 568 (710)
Q Consensus 506 ---l~g~~~~-----~~~~~lv~Ey~~~gsL~~~l~---------~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDl 568 (710)
+..++.. ....+++|+++ +|+|.+++. ..++|..+..|+.|+++||+|||+. +|+||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiHrDi 237 (413)
T 3dzo_A 162 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYL 237 (413)
T ss_dssp ---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred CCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCc
Confidence 1111111 12457777765 589999884 2356788899999999999999998 9999999
Q ss_pred CCCCeEecCCCceEEcccCccccccccCCCCcccccccCchhhh----------hccCCccccceeeHHHHHHHHHhCCC
Q 005177 569 KASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFY----------NAMKEEMYMDVYGFGEIILEILTNGR 638 (710)
Q Consensus 569 k~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~e~~----------~~~~~~~~~DVySfGvvl~Elltg~~ 638 (710)
||+|||++.++.+||+|||+++.......... + ..|.+||+. ....++.++|||||||++|||+||+.
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~-g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~ 315 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGASAVSPI-G-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADL 315 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEEECCCC-C-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSC
T ss_pred ccceEEEecCCeEEEEeccceeecCCccccCC-C-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCC
Confidence 99999999999999999999886654322222 3 557888887 44457889999999999999999999
Q ss_pred CCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 639 LTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 639 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
||....... ....+.... .. . ...+.+++.+||+.||++||++.|+++
T Consensus 316 Pf~~~~~~~------~~~~~~~~~-~~----~---~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 316 PNTDDAALG------GSEWIFRSC-KN----I---PQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp CCCTTGGGS------CSGGGGSSC-CC----C---CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCcchhh------hHHHHHhhc-cc----C---CHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 987443211 111111111 11 1 145778889999999999999877754
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.1e-31 Score=291.39 Aligned_cols=284 Identities=20% Similarity=0.183 Sum_probs=247.3
Q ss_pred EEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEEC
Q 005177 77 VVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDA 156 (710)
Q Consensus 77 v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L 156 (710)
+..++++++.+.+..+..+.. +++|++|+|++|.+++..|..|.++++|++|+|++|.++...+..|+++++|++|++
T Consensus 71 L~~L~L~~n~i~~~~~~~~~~--l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 148 (390)
T 3o6n_A 71 VELLNLNDLQIEEIDTYAFAY--AHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 148 (390)
T ss_dssp CSEEECTTSCCCEECTTTTTT--CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CcEEECCCCcccccChhhccC--CCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEEC
Confidence 345677777776655556666 899999999999999888888999999999999999999655556799999999999
Q ss_pred CCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccccccccccccccccccccc
Q 005177 157 FSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGN 236 (710)
Q Consensus 157 ~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~ 236 (710)
++|.+++..|..+.++++|++|++++|.+++. .+..+++|+.|++++|.+++ +....+|+.|++++|.+...
T Consensus 149 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~l~~~ 220 (390)
T 3o6n_A 149 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVV 220 (390)
T ss_dssp CSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE-----EECCSSCSEEECCSSCCCEE
T ss_pred CCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccc-----cCCCCcceEEECCCCeeeec
Confidence 99999988888999999999999999999864 36778999999999998864 34456899999999998754
Q ss_pred CCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCC
Q 005177 237 IPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADL 316 (710)
Q Consensus 237 ~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 316 (710)
|. ...++|+.|++++|++++. ..+..+++|+.|++++|.+++..|..+..+++|+.|++++|++++ +|..+..+
T Consensus 221 -~~--~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l 294 (390)
T 3o6n_A 221 -RG--PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPI 294 (390)
T ss_dssp -EC--CCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCC
T ss_pred -cc--cccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCC
Confidence 33 2357899999999999864 578999999999999999999889999999999999999999986 67777889
Q ss_pred CCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCcc
Q 005177 317 KNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGS 380 (710)
Q Consensus 317 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ 380 (710)
++|+.|++++|+++ .+|..+..+++|++|++++|.++.. | +..+++|+.|++++|.+++.
T Consensus 295 ~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 295 PTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp TTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHH
T ss_pred CCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccch
Confidence 99999999999998 5777888999999999999999854 4 67889999999999999864
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.98 E-value=6.7e-31 Score=280.31 Aligned_cols=286 Identities=21% Similarity=0.286 Sum_probs=253.7
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
+++|++|++++|.+.. +| .+..+++|++|++++|.+++..+ +.++++|++|++++|.++. +| .+.++++|++|+
T Consensus 43 l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~ 116 (347)
T 4fmz_A 43 LESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELY 116 (347)
T ss_dssp HTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEE
T ss_pred cccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEE
Confidence 7899999999999974 55 48899999999999999986544 9999999999999999985 44 699999999999
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCc
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g 259 (710)
+++|.+++. |. +..+++|+.|++++|.....++. +..+++|++|++++|.+.+..+ +..+++|+.|++++|.+++
T Consensus 117 l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~ 191 (347)
T 4fmz_A 117 LNEDNISDI-SP-LANLTKMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED 191 (347)
T ss_dssp CTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC
T ss_pred CcCCcccCc-hh-hccCCceeEEECCCCCCcccccc-hhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc
Confidence 999999864 44 89999999999999977665554 8999999999999999876544 8899999999999999985
Q ss_pred cCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCC
Q 005177 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (710)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 339 (710)
..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|.+++. +.+..
T Consensus 192 ~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~ 263 (347)
T 4fmz_A 192 ISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKD 263 (347)
T ss_dssp CGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTT
T ss_pred ccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhc
Confidence 443 8889999999999999987554 7889999999999999987544 89999999999999999863 56889
Q ss_pred CCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecccCCcccchh
Q 005177 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 340 l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~l~g~i~ 406 (710)
+++|++|++++|.+++. +.+..+++|+.|++++|.+++..|..+..+++|+.|++++|++++..|
T Consensus 264 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 264 LTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG
T ss_pred CCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC
Confidence 99999999999999864 458889999999999999999999999999999999999999999776
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-30 Score=285.38 Aligned_cols=288 Identities=23% Similarity=0.301 Sum_probs=154.5
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEE
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 155 (710)
.+..++++.+.+++ +|.. +++|++|++++|.+++ +|.. .++|++|++++|++++ +| .++++++|++|+
T Consensus 92 ~L~~L~l~~n~l~~-lp~~-----~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~ 159 (454)
T 1jl5_A 92 HLESLVASCNSLTE-LPEL-----PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIID 159 (454)
T ss_dssp TCSEEECCSSCCSS-CCCC-----CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEE
T ss_pred CCCEEEccCCcCCc-cccc-----cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEE
Confidence 35556666666665 4432 3456666666666653 2211 1466666666666664 55 366666666666
Q ss_pred CCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccc
Q 005177 156 AFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG 235 (710)
Q Consensus 156 L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g 235 (710)
+++|++++ +|..+ .+|++|++++|++++ +| .++++++|+.|++++|.+++ +|... ++|+.|++++|.++
T Consensus 160 l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~- 228 (454)
T 1jl5_A 160 VDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE- 228 (454)
T ss_dssp CCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-
T ss_pred CCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-
Confidence 66666664 44432 366666666666664 44 46666666666666666654 33322 35666666666665
Q ss_pred cCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCC--CCCcc-
Q 005177 236 NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG--PIPES- 312 (710)
Q Consensus 236 ~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~- 312 (710)
.+|. ++.+++|++|++++|++++ +|.. +++|+.|++++|++++ +|.. +++|+.|++++|++++ .+|..
T Consensus 229 ~lp~-~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~~~~~L 299 (454)
T 1jl5_A 229 ELPE-LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSELPPNL 299 (454)
T ss_dssp SCCC-CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESCCCTTC
T ss_pred cccc-cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcccCcCCcC
Confidence 4553 5666666666666666654 3321 2556666666666654 3322 2455555555555554 22211
Q ss_pred ------------ccCC-CCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCc
Q 005177 313 ------------FADL-KNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNG 379 (710)
Q Consensus 313 ------------~~~l-~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g 379 (710)
+..+ ++|+.|++++|++++ +|.. +++|++|++++|+++ .+|. .+++|+.|++++|++++
T Consensus 300 ~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 300 YYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp CEEECCSSCCSEECCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSS
T ss_pred CEEECcCCcCCcccCCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCc
Confidence 1112 356666666666664 4443 466677777777666 3554 35667777777777776
Q ss_pred --cCcccccCC-------------CceeeEecccCCccc
Q 005177 380 --SIPPDICSG-------------GVLFKLILFSNNFTG 403 (710)
Q Consensus 380 --~ip~~~~~~-------------~~L~~l~l~~N~l~g 403 (710)
.+|.++..+ ++|+.|++++|+++|
T Consensus 372 l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~ 410 (454)
T 1jl5_A 372 FPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLRE 410 (454)
T ss_dssp CCCCCTTCCEEECCC------------------------
T ss_pred CCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCc
Confidence 666666555 566667777776665
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-31 Score=283.93 Aligned_cols=286 Identities=20% Similarity=0.200 Sum_probs=201.3
Q ss_pred CCCCceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCC
Q 005177 59 KIYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFS 138 (710)
Q Consensus 59 ~~~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 138 (710)
...+|.|.|+ |+. ++++++ .+|..+ .+.|++|+|++|.+++..+..|.++++|++|+|++|+++
T Consensus 26 ~~~~C~~~~~-c~~----------~~~~l~-~iP~~~----~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~ 89 (353)
T 2z80_A 26 ASLSCDRNGI-CKG----------SSGSLN-SIPSGL----TEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGIN 89 (353)
T ss_dssp -CCEECTTSE-EEC----------CSTTCS-SCCTTC----CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCC
T ss_pred cCCCCCCCeE-eeC----------CCCCcc-cccccc----cccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccC
Confidence 3457899887 754 233343 345443 458999999999999766668999999999999999999
Q ss_pred CCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCC-cccCCCCCCCeEEecCCc-CCCCCccc
Q 005177 139 GHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIP-SQFGSFKSLEFLHLAGNL-LNDQIPAE 216 (710)
Q Consensus 139 ~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~-l~~~~p~~ 216 (710)
+..|..|+++++|++|+|++|.+++..+..+.++++|++|+|++|++++..+ ..|.++++|++|++++|. +.+..|..
T Consensus 90 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~ 169 (353)
T 2z80_A 90 TIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKD 169 (353)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTT
T ss_pred ccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHH
Confidence 9888899999999999999999997656669999999999999999985433 478999999999999984 66555667
Q ss_pred ccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCC
Q 005177 217 LGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLK 296 (710)
Q Consensus 217 l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 296 (710)
++.+++|++|++++|.+.+..|..++++++|++|++++|+++...+..+..+++|+.|++++|.+++..+..+..
T Consensus 170 ~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~----- 244 (353)
T 2z80_A 170 FAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELST----- 244 (353)
T ss_dssp TTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC---------
T ss_pred ccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccccc-----
Confidence 777777777777777777766777777777777777777765333233344666666666666666543332211
Q ss_pred EEEccCCCCCCCCCccccCCCCCCEEEcccccCcc----cCCcccCCCCCCcEEeccCCCCCCCCCcc-cCCCCCCcEEE
Q 005177 297 SLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSG----TVPESLVQLPSLEILFIWNNYFSGSLPEN-LGRNSKLRWVD 371 (710)
Q Consensus 297 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~L~~N~l~g~~p~~-l~~~~~L~~L~ 371 (710)
......++.+++++|.+++ .+|..+..+++|++|++++|+++ .+|.. +..+++|+.|+
T Consensus 245 ----------------~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~ 307 (353)
T 2z80_A 245 ----------------GETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIW 307 (353)
T ss_dssp ------------------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred ----------------ccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEE
Confidence 1123345555555555544 34556666666666777666666 44444 36666777777
Q ss_pred CCCCcCCccCc
Q 005177 372 VSTNNFNGSIP 382 (710)
Q Consensus 372 ls~N~l~g~ip 382 (710)
+++|.+++..|
T Consensus 308 L~~N~~~~~~~ 318 (353)
T 2z80_A 308 LHTNPWDCSCP 318 (353)
T ss_dssp CCSSCBCCCHH
T ss_pred eeCCCccCcCC
Confidence 77776666544
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.3e-31 Score=290.98 Aligned_cols=291 Identities=21% Similarity=0.262 Sum_probs=146.1
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCC------------------------------
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLT------------------------------ 125 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~------------------------------ 125 (710)
++..++++++.+ |.+|++++. +++|++|+|++|.+.|.+|.++++++
T Consensus 12 ~L~~L~l~~n~l-~~iP~~i~~--L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~ 88 (454)
T 1jl5_A 12 FLQEPLRHSSNL-TEMPVEAEN--VKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPE 88 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCS
T ss_pred cchhhhcccCch-hhCChhHhc--ccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCC
Confidence 455666777777 677766666 66666666666666666666555544
Q ss_pred ---CCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeE
Q 005177 126 ---SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFL 202 (710)
Q Consensus 126 ---~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 202 (710)
+|++|++++|.+++ +|.. +++|++|++++|.+++ +|.. .++|++|++++|++++ +| .|+++++|++|
T Consensus 89 ~~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L 158 (454)
T 1jl5_A 89 LPPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKII 158 (454)
T ss_dssp CCTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEE
T ss_pred CcCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEE
Confidence 44555555555544 3322 2445555555555443 2211 1467777777777775 66 47777777777
Q ss_pred EecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccC
Q 005177 203 HLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLA 282 (710)
Q Consensus 203 ~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~ 282 (710)
++++|++++ +|..+ .+|++|++++|.+++ +| .++++++|++|++++|++++ +|.. .++|++|++++|.++
T Consensus 159 ~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~n~l~ 228 (454)
T 1jl5_A 159 DVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL---PLSLESIVAGNNILE 228 (454)
T ss_dssp ECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS
T ss_pred ECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC---cCcccEEECcCCcCC
Confidence 777777764 55433 466777777777765 45 46667777777777776664 3322 135666666666665
Q ss_pred CCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCC--CCCcc
Q 005177 283 GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSG--SLPEN 360 (710)
Q Consensus 283 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g--~~p~~ 360 (710)
.+| .+..+++|++|++++|++++ +|.. +++|+.|++++|++++ +|.. +++|++|++++|.+++ .+|..
T Consensus 229 -~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~~~~~ 298 (454)
T 1jl5_A 229 -ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSELPPN 298 (454)
T ss_dssp -SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESCCCTT
T ss_pred -ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcccCcCCc
Confidence 444 25556666666666666554 3322 2344445554444443 2321 1334444444444433 22211
Q ss_pred c-------------CCC-CCCcEEECCCCcCCccCcccccCCCceeeEecccCCccc
Q 005177 361 L-------------GRN-SKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTG 403 (710)
Q Consensus 361 l-------------~~~-~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~l~g 403 (710)
+ ... ++|+.|++++|++++ +|.. .+.|+.|++++|++++
T Consensus 299 L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~ 351 (454)
T 1jl5_A 299 LYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE 351 (454)
T ss_dssp CCEEECCSSCCSEECCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC
T ss_pred CCEEECcCCcCCcccCCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc
Confidence 1 111 356666666666664 4543 3556666666666653
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.7e-34 Score=315.87 Aligned_cols=229 Identities=18% Similarity=0.181 Sum_probs=108.7
Q ss_pred CCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEec
Q 005177 126 SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLA 205 (710)
Q Consensus 126 ~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 205 (710)
+|++|+|++|.+++..|..|+.+++|++|+|++|.+++..| +..+++|++|+|++|.+++..+ .++|+.|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 44444444444444444444444444444444444443333 4444444444444444443211 1444455555
Q ss_pred CCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCC
Q 005177 206 GNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQV 285 (710)
Q Consensus 206 ~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~ 285 (710)
+|.+++..+.. +++|+.|++++|.+++..|..++.+++|+.|+|++|.+++.+
T Consensus 108 ~N~l~~~~~~~---------------------------l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (487)
T 3oja_A 108 NNNISRVSCSR---------------------------GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (487)
T ss_dssp SSCCCCEEECC---------------------------CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEE
T ss_pred CCcCCCCCccc---------------------------cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcC
Confidence 44444322211 122333333333333333333444444444444444444444
Q ss_pred Ccccc-CCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCC
Q 005177 286 PWEFS-RVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN 364 (710)
Q Consensus 286 p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~ 364 (710)
|..+. .+++|+.|+|++|.+++..+ +..+++|+.|+|++|.+++. |..+..+++|+.|+|++|.+++ +|..+..+
T Consensus 161 ~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l 236 (487)
T 3oja_A 161 FAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFS 236 (487)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCC
T ss_pred hHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccC
Confidence 43332 34455555555555543311 22355566666666665543 3335556666666666666663 55556666
Q ss_pred CCCcEEECCCCcCC-ccCcccccCCCcee
Q 005177 365 SKLRWVDVSTNNFN-GSIPPDICSGGVLF 392 (710)
Q Consensus 365 ~~L~~L~ls~N~l~-g~ip~~~~~~~~L~ 392 (710)
++|+.|++++|.+. +.+|..+..++.+.
T Consensus 237 ~~L~~L~l~~N~l~c~~~~~~~~~l~~L~ 265 (487)
T 3oja_A 237 QNLEHFDLRGNGFHCGTLRDFFSKNQRVQ 265 (487)
T ss_dssp TTCCEEECTTCCBCHHHHHHHHTTCHHHH
T ss_pred CCCCEEEcCCCCCcCcchHHHHHhCCCCc
Confidence 66666677666666 55555554444443
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-32 Score=289.84 Aligned_cols=235 Identities=11% Similarity=0.120 Sum_probs=174.7
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccch---------hHHHHHHHHHHHhccC---------CCCceeEEEEEE
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---------RIKIVSEFITRIGTVR---------HKNLIRLLGFCY 511 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~---------~~~~~~~e~~~l~~l~---------H~niv~l~g~~~ 511 (710)
..+.||+|+||.||+|+. +|+.||||++..... ..+.+.+|++++++++ |||||++.+++.
T Consensus 24 ~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~ 102 (336)
T 2vuw_A 24 RCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHC 102 (336)
T ss_dssp TCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEE
T ss_pred heeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeE
Confidence 678999999999999987 789999999986421 1367888999888875 888888877653
Q ss_pred ------------------------------cCCceeEEEeecCCCChhhhh-hcCCCHHHHHHHHHHHHHHHHHHh-cCC
Q 005177 512 ------------------------------NRHQAYLLYDYLPNGNLSEKI-RTKRDWAAKYKIVLGVARGLCFLH-HDC 559 (710)
Q Consensus 512 ------------------------------~~~~~~lv~Ey~~~gsL~~~l-~~~~~~~~~~~i~~~ia~gL~yLH-~~~ 559 (710)
+++..|+||||+++|++.+.+ ....++.....|+.|++.||+||| +.
T Consensus 103 ~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~- 181 (336)
T 2vuw_A 103 VQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASL- 181 (336)
T ss_dssp EESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred ecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhC-
Confidence 267899999999999765555 446789999999999999999999 78
Q ss_pred CCCceecCCCCCCeEecCCC--------------------ceEEcccCccccccccCCCCcccccccCchhhhhccCCcc
Q 005177 560 YPAIPHGDLKASNIVFDENM--------------------EPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEM 619 (710)
Q Consensus 560 ~~~iiHrDlk~~NiLl~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 619 (710)
+|+||||||+|||++.++ .+||+|||+|+..... ...++..|.+||...+.. +.
T Consensus 182 --~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~---~~~gt~~y~aPE~~~g~~-~~ 255 (336)
T 2vuw_A 182 --RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG---IVVFCDVSMDEDLFTGDG-DY 255 (336)
T ss_dssp --CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT---EEECCCCTTCSGGGCCCS-SH
T ss_pred --CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC---cEEEeecccChhhhcCCC-cc
Confidence 999999999999999887 8999999999876422 223445577888877655 88
Q ss_pred ccceeeHHHH-HHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 005177 620 YMDVYGFGEI-ILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEA 698 (710)
Q Consensus 620 ~~DVySfGvv-l~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~ev 698 (710)
++||||+|++ .+++.+|..|+.+...... ............. .............+.+++.+|++.| |++|+
T Consensus 256 ~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~ 328 (336)
T 2vuw_A 256 QFDIYRLMKKENNNRWGEYHPYSNVLWLHY-LTDKMLKQMTFKT-KCNTPAMKQIKRKIQEFHRTMLNFS-----SATDL 328 (336)
T ss_dssp HHHHHHHHHHHHTTCTTSCCTHHHHHHHHH-HHHHHHHTCCCSS-CCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHH
T ss_pred ceehhhhhCCCCcccccccCCCcchhhhhH-HHHhhhhhhccCc-ccchhhhhhcCHHHHHHHHHHhccC-----CHHHH
Confidence 9999998776 7778888888742100000 0000010111111 1112234456678899999999976 99998
Q ss_pred H
Q 005177 699 L 699 (710)
Q Consensus 699 l 699 (710)
+
T Consensus 329 l 329 (336)
T 2vuw_A 329 L 329 (336)
T ss_dssp H
T ss_pred H
Confidence 7
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.9e-31 Score=274.36 Aligned_cols=285 Identities=22% Similarity=0.250 Sum_probs=184.5
Q ss_pred CCceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCC-
Q 005177 61 YACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG- 139 (710)
Q Consensus 61 ~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~- 139 (710)
..|.|.++.|+... +. .+|..+ .+.|++|+|++|.++...+..|.++++|++|+|++|.++.
T Consensus 5 C~C~~~~l~c~~~~------------l~-~ip~~~----~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 67 (306)
T 2z66_A 5 CSCSGTEIRCNSKG------------LT-SVPTGI----PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFK 67 (306)
T ss_dssp CEEETTEEECCSSC------------CS-SCCSCC----CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEE
T ss_pred CeeCCCEEEcCCCC------------cc-cCCCCC----CCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcc
Confidence 34899999997621 11 233332 3579999999999985444457899999999999999873
Q ss_pred -CCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCC-cccCCCCCCCeEEecCCcCCCCCcccc
Q 005177 140 -HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIP-SQFGSFKSLEFLHLAGNLLNDQIPAEL 217 (710)
Q Consensus 140 -~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l 217 (710)
..|..+..+++|++|+|++|.++ .+|..+.++++|++|++++|.+++..+ ..+..+++|++|++++|.+.+..|..+
T Consensus 68 ~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 146 (306)
T 2z66_A 68 GCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIF 146 (306)
T ss_dssp EEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTT
T ss_pred cCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhc
Confidence 34677888999999999999988 477789999999999999999986554 578888999999999988877666666
Q ss_pred cccccccccccccccccc-cCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCC
Q 005177 218 GMLKTVTHMEIGYNFYQG-NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLK 296 (710)
Q Consensus 218 ~~l~~L~~L~l~~n~~~g-~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 296 (710)
..+++|+.|++++|.+.+ .+|.. +..+++|++|++++|.+++..|..+..+++|+
T Consensus 147 ~~l~~L~~L~l~~n~l~~~~~~~~------------------------~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 202 (306)
T 2z66_A 147 NGLSSLEVLKMAGNSFQENFLPDI------------------------FTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 202 (306)
T ss_dssp TTCTTCCEEECTTCEEGGGEECSC------------------------CTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred ccCcCCCEEECCCCccccccchhH------------------------HhhCcCCCEEECCCCCcCCcCHHHhcCCCCCC
Confidence 666666666666555544 33444 44445555555555555544444555555555
Q ss_pred EEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCC-CCcEEeccCCCCCCCCCc--ccCCCCCCcEEECC
Q 005177 297 SLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLP-SLEILFIWNNYFSGSLPE--NLGRNSKLRWVDVS 373 (710)
Q Consensus 297 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~-~L~~L~L~~N~l~g~~p~--~l~~~~~L~~L~ls 373 (710)
.|++++|++++..+..+..+++|+.|++++|++++..|..+..++ +|++|++++|.+++.-+. ....+...+.+.+.
T Consensus 203 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~ 282 (306)
T 2z66_A 203 VLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVE 282 (306)
T ss_dssp EEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSC
T ss_pred EEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhcc
Confidence 555555555544444555555555555555555555555555553 566666666665543210 01111222333444
Q ss_pred CCcCCccCcccccC
Q 005177 374 TNNFNGSIPPDICS 387 (710)
Q Consensus 374 ~N~l~g~ip~~~~~ 387 (710)
.+.+....|+.+.+
T Consensus 283 ~~~~~C~~p~~~~g 296 (306)
T 2z66_A 283 VERMECATPSDKQG 296 (306)
T ss_dssp GGGCBEEESGGGTT
T ss_pred ccccccCCchhhCC
Confidence 55666666665543
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-30 Score=271.56 Aligned_cols=236 Identities=19% Similarity=0.232 Sum_probs=216.9
Q ss_pred CCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeE
Q 005177 123 NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFL 202 (710)
Q Consensus 123 ~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 202 (710)
..+++++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..++++++|++|
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 4588999999999998 78888999999999999999999 89999999999999999999999 789999999999999
Q ss_pred EecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccC
Q 005177 203 HLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLA 282 (710)
Q Consensus 203 ~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~ 282 (710)
++++|.+.+.+|..++.. .++..+.++++|++|++++|+++ .+|..++.+++|++|++++|.++
T Consensus 156 ~L~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~ 219 (328)
T 4fcg_A 156 SIRACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS 219 (328)
T ss_dssp EEEEETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC
T ss_pred ECCCCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC
Confidence 999999988888876542 12334677899999999999999 88999999999999999999999
Q ss_pred CCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccC
Q 005177 283 GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLG 362 (710)
Q Consensus 283 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~ 362 (710)
+ +|..+..+++|+.|++++|++.+.+|..++.+++|+.|+|++|++.+.+|..+..+++|++|+|++|++.+.+|..++
T Consensus 220 ~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~ 298 (328)
T 4fcg_A 220 A-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIA 298 (328)
T ss_dssp C-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGG
T ss_pred c-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHh
Confidence 6 666799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEECCCCcCC
Q 005177 363 RNSKLRWVDVSTNNFN 378 (710)
Q Consensus 363 ~~~~L~~L~ls~N~l~ 378 (710)
.+++|+.+++..|.+.
T Consensus 299 ~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 299 QLPANCIILVPPHLQA 314 (328)
T ss_dssp GSCTTCEEECCGGGSC
T ss_pred hccCceEEeCCHHHHH
Confidence 9999999999987765
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-30 Score=276.10 Aligned_cols=277 Identities=21% Similarity=0.169 Sum_probs=202.2
Q ss_pred CcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccC
Q 005177 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182 (710)
Q Consensus 103 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~ 182 (710)
....|+++|.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 33 ~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (353)
T 2z80_A 33 NGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSY 109 (353)
T ss_dssp TSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCC
Confidence 345888999987 6777665 5899999999999987777899999999999999999988888899999999999999
Q ss_pred CCCCCCCCcccCCCCCCCeEEecCCcCCCCCc-ccccccccccccccccccccccCCccccCCCccchhccccccCCccC
Q 005177 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP-AELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261 (710)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~ 261 (710)
|++++..+..|+++++|++|++++|.+++..+ ..+..+++|++|++++|. .+++..
T Consensus 110 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~-----------------------~~~~~~ 166 (353)
T 2z80_A 110 NYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMD-----------------------TFTKIQ 166 (353)
T ss_dssp SCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESS-----------------------SCCEEC
T ss_pred CcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCc-----------------------cccccC
Confidence 99986555558899999999999998874322 245555555555555552 233333
Q ss_pred chhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCccc---C
Q 005177 262 PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESL---V 338 (710)
Q Consensus 262 p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~---~ 338 (710)
+..+..+++|+.|++++|.+++..|..+..+++|++|++++|++....+..+..+++|+.|++++|++++..+..+ .
T Consensus 167 ~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~ 246 (353)
T 2z80_A 167 RKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGE 246 (353)
T ss_dssp TTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------
T ss_pred HHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccccccc
Confidence 3445555555555555555555555555555556666666665543222233445666666666666665443332 2
Q ss_pred CCCCCcEEeccCCCCCC----CCCcccCCCCCCcEEECCCCcCCccCcccc-cCCCceeeEecccCCcccchh
Q 005177 339 QLPSLEILFIWNNYFSG----SLPENLGRNSKLRWVDVSTNNFNGSIPPDI-CSGGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 339 ~l~~L~~L~L~~N~l~g----~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~-~~~~~L~~l~l~~N~l~g~i~ 406 (710)
..+.++.+++++|.+++ .+|..+..+++|+.|++++|+++ .+|..+ ..+++|++|++++|.+++..|
T Consensus 247 ~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 247 TNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 45678899999998886 47888899999999999999999 688775 789999999999999999877
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=272.68 Aligned_cols=276 Identities=20% Similarity=0.206 Sum_probs=222.6
Q ss_pred cEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCc--CCchhccCCCCCCEEEcc
Q 005177 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSG--SVPAEISQLEHLKVLNLA 181 (710)
Q Consensus 104 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~--~~p~~~~~L~~L~~L~L~ 181 (710)
+.++++++.++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|.++. ..|..+..+++|++|+|+
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 46788888886 5676553 689999999999986555567899999999999999883 347778889999999999
Q ss_pred CCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccC
Q 005177 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261 (710)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~ 261 (710)
+|.++ .+|..+..+++|++|++++|.+++..+ +..+.++++|++|++++|.+++..
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~-----------------------~~~~~~l~~L~~L~l~~n~l~~~~ 142 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSE-----------------------FSVFLSLRNLIYLDISHTHTRVAF 142 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEESSTT-----------------------TTTTTTCTTCCEEECTTSCCEECS
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCccccccc-----------------------chhhhhccCCCEEECCCCcCCccc
Confidence 99887 467778888888888888887764322 023556677888888888888778
Q ss_pred chhccCCCCCcEEEccccccCC-CCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCC
Q 005177 262 PKELSNLTKLESLFLFRNQLAG-QVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQL 340 (710)
Q Consensus 262 p~~l~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 340 (710)
|..+..+++|++|++++|.+++ .+|..+..+++|++|++++|++++..|..+..+++|+.|++++|++++..+..+..+
T Consensus 143 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 222 (306)
T 2z66_A 143 NGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCL 222 (306)
T ss_dssp TTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTC
T ss_pred hhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCc
Confidence 8888889999999999999987 578889999999999999999999889999999999999999999998777789999
Q ss_pred CCCcEEeccCCCCCCCCCcccCCCC-CCcEEECCCCcCCccCccc--ccCCCceeeEecccCCcccchh
Q 005177 341 PSLEILFIWNNYFSGSLPENLGRNS-KLRWVDVSTNNFNGSIPPD--ICSGGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 341 ~~L~~L~L~~N~l~g~~p~~l~~~~-~L~~L~ls~N~l~g~ip~~--~~~~~~L~~l~l~~N~l~g~i~ 406 (710)
++|++|++++|.+++..|..+..++ +|+.|++++|.+++.-+.. .........+....+.+....|
T Consensus 223 ~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p 291 (306)
T 2z66_A 223 NSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATP 291 (306)
T ss_dssp TTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEES
T ss_pred ccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCc
Confidence 9999999999999999999999884 9999999999998753310 1111223334445555555444
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.96 E-value=9.7e-29 Score=273.46 Aligned_cols=227 Identities=22% Similarity=0.246 Sum_probs=157.5
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEc
Q 005177 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L 180 (710)
+++++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 57899999999999888899999999999999999999988899999999999999999999877778999999999999
Q ss_pred cCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcc-cccccccccccccccccccccCCccccCCCccchhccccccCCc
Q 005177 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPA-ELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (710)
Q Consensus 181 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g 259 (710)
++|.++...+..|.++++|+.|++++|...+.+|. .+..+++|++|++++|.+++ +| .+..+++|+.|++++|++++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~ 232 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPE 232 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcc
Confidence 99999977777899999999999998554444443 45556666666666655543 22 24444455555555555554
Q ss_pred cCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccC
Q 005177 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEM 329 (710)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 329 (710)
..|..|.++++|+.|++++|++++..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+
T Consensus 233 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~ 302 (452)
T 3zyi_A 233 IRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPW 302 (452)
T ss_dssp ECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCE
T ss_pred cCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCc
Confidence 4444444455555555555554444444444444444444444444444444444444444444444443
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-30 Score=274.50 Aligned_cols=247 Identities=19% Similarity=0.166 Sum_probs=116.6
Q ss_pred cCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCC-CcCCchhcc-------CCCCCCEEEccCCCCCCCCCccc
Q 005177 122 FNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSF-SGSVPAEIS-------QLEHLKVLNLAGSYFSGPIPSQF 193 (710)
Q Consensus 122 ~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l-~~~~p~~~~-------~L~~L~~L~L~~n~l~~~~p~~~ 193 (710)
+..++|++|++++|.+ .+|..+... |+.|+|++|.+ .+.+|..+. ++++|++|+|++|++++.+|..+
T Consensus 40 ~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred ccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 3444555555555555 455544433 55556666655 334555444 56666666666666666566554
Q ss_pred --CCCCCCCeEEecCCcCCCCCccccccc-----ccccccccccccccccCCccccCCCccchhccccccCCcc--Cchh
Q 005177 194 --GSFKSLEFLHLAGNLLNDQIPAELGML-----KTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS--IPKE 264 (710)
Q Consensus 194 --~~l~~L~~L~L~~N~l~~~~p~~l~~l-----~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~--~p~~ 264 (710)
..+++|++|+|++|.+++. |..++.+ ++|++|++++|.+.+..|..++++++|++|++++|++.+. +|..
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 194 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISA 194 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHH
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHH
Confidence 5666666666666666554 5444443 3444444444444333333444444444444444444332 1222
Q ss_pred c--cCCCCCcEEEccccccCC--CCC-ccccCCCCCCEEEccCCCCCCCCC-ccccCCCCCCEEEcccccCcccCCcccC
Q 005177 265 L--SNLTKLESLFLFRNQLAG--QVP-WEFSRVTTLKSLDLSDNRLSGPIP-ESFADLKNLRLLSLMYNEMSGTVPESLV 338 (710)
Q Consensus 265 l--~~l~~L~~L~L~~n~l~~--~~p-~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 338 (710)
+ ..+++|++|++++|.+++ .++ ..+..+++|+.|++++|++++.+| ..+..+++|+.|+|++|+++ .+|..+.
T Consensus 195 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~ 273 (312)
T 1wwl_A 195 LCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP 273 (312)
T ss_dssp SCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC
T ss_pred HHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc
Confidence 2 444445555555544442 111 122334444455555554444432 22333444444444444444 3444333
Q ss_pred CCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCC
Q 005177 339 QLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFN 378 (710)
Q Consensus 339 ~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~ 378 (710)
++|++|++++|++++. |. +..+++|+.|++++|.++
T Consensus 274 --~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 274 --AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp --SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred --CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 4444444444444433 33 444444444444444443
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-28 Score=268.13 Aligned_cols=109 Identities=25% Similarity=0.184 Sum_probs=86.7
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEc
Q 005177 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L 180 (710)
+.++.|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|.++++|++|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 46888888888888777778888888888888888888777778888888888888888888666667888888888888
Q ss_pred cCCCCCCCCCcccCCCCCCCeEEecCCcC
Q 005177 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLL 209 (710)
Q Consensus 181 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 209 (710)
++|.++...+..|.++++|+.|++++|..
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~ 172 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKR 172 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTT
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCC
Confidence 88888766666777778888887777543
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.9e-28 Score=269.65 Aligned_cols=236 Identities=20% Similarity=0.201 Sum_probs=185.9
Q ss_pred cCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCC
Q 005177 116 QFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGS 195 (710)
Q Consensus 116 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~ 195 (710)
.+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|.+
T Consensus 68 ~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 145 (452)
T 3zyi_A 68 EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEY 145 (452)
T ss_dssp SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSS
T ss_pred ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcc
Confidence 4555443 68999999999999998999999999999999999999888899999999999999999999877778999
Q ss_pred CCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEE
Q 005177 196 FKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLF 275 (710)
Q Consensus 196 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~ 275 (710)
+++|++|+|++|.++...+..+..+++|+.|+++.|. .+....+..+..+++|++|+
T Consensus 146 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~-----------------------~l~~i~~~~~~~l~~L~~L~ 202 (452)
T 3zyi_A 146 LSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELK-----------------------KLEYISEGAFEGLFNLKYLN 202 (452)
T ss_dssp CTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCT-----------------------TCCEECTTTTTTCTTCCEEE
T ss_pred cCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCC-----------------------CccccChhhccCCCCCCEEE
Confidence 9999999999998875544455555555555544432 22222223466677777777
Q ss_pred ccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCC
Q 005177 276 LFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSG 355 (710)
Q Consensus 276 L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g 355 (710)
+++|++++. | .+..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..+..+++|+.|+|++|++++
T Consensus 203 L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 280 (452)
T 3zyi_A 203 LGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSS 280 (452)
T ss_dssp CTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCc
Confidence 777777653 3 36677788888888888887778888888888888888888888778888888888888888888887
Q ss_pred CCCcccCCCCCCcEEECCCCcCC
Q 005177 356 SLPENLGRNSKLRWVDVSTNNFN 378 (710)
Q Consensus 356 ~~p~~l~~~~~L~~L~ls~N~l~ 378 (710)
..+..+..+++|+.|++++|.+.
T Consensus 281 ~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 281 LPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp CCTTSSTTCTTCCEEECCSSCEE
T ss_pred cChHHhccccCCCEEEccCCCcC
Confidence 66677778888888888888765
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-30 Score=272.58 Aligned_cols=246 Identities=19% Similarity=0.228 Sum_probs=185.5
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCC-CCCCChhhc-------CCCCCCEEECCCCCCCcCCchhc--
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNF-SGHFPGGIQ-------SLRNLLVLDAFSNSFSGSVPAEI-- 169 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~l~-------~L~~L~~L~L~~N~l~~~~p~~~-- 169 (710)
.++|+.|++++|.+ .+|..+... |++|+|++|.+ .+.+|..+. ++++|++|+|++|.+++.+|..+
T Consensus 42 ~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 117 (312)
T 1wwl_A 42 GRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLE 117 (312)
T ss_dssp EEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSS
T ss_pred CCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHH
Confidence 34566677777777 566655543 77777777776 445666555 67777777777777777777665
Q ss_pred cCCCCCCEEEccCCCCCCCCCcccCCC-----CCCCeEEecCCcCCCCCccccccccccccccccccccccc--CCccc-
Q 005177 170 SQLEHLKVLNLAGSYFSGPIPSQFGSF-----KSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGN--IPWQL- 241 (710)
Q Consensus 170 ~~L~~L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~--~p~~l- 241 (710)
..+++|++|+|++|++++. |..++.+ ++|++|++++|++++..|..++.+++|++|++++|.+.+. +|..+
T Consensus 118 ~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 196 (312)
T 1wwl_A 118 ATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALC 196 (312)
T ss_dssp CCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSC
T ss_pred hcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHH
Confidence 6777777777777777765 6666655 6777777777777766667777777777777777776655 23334
Q ss_pred -cCCCccchhccccccCCc--cCc-hhccCCCCCcEEEccccccCCCCC-ccccCCCCCCEEEccCCCCCCCCCccccCC
Q 005177 242 -GNMSEVQYLDIAGANLSG--SIP-KELSNLTKLESLFLFRNQLAGQVP-WEFSRVTTLKSLDLSDNRLSGPIPESFADL 316 (710)
Q Consensus 242 -~~l~~L~~L~ls~n~l~g--~~p-~~l~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 316 (710)
+++++|++|++++|++++ .++ ..+..+++|+.|++++|++++..| ..+..+++|++|++++|+++ .+|..+.
T Consensus 197 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~-- 273 (312)
T 1wwl_A 197 PLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP-- 273 (312)
T ss_dssp TTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--
T ss_pred hccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--
Confidence 788889999999999883 233 335678999999999999998775 45667899999999999998 7888776
Q ss_pred CCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCC
Q 005177 317 KNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSG 355 (710)
Q Consensus 317 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g 355 (710)
++|+.|+|++|++++. |. +..+++|++|++++|++++
T Consensus 274 ~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 274 AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 8999999999999976 66 8899999999999999985
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.9e-29 Score=257.75 Aligned_cols=207 Identities=23% Similarity=0.245 Sum_probs=131.0
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCC-CCcCCchhccCCCCCCEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS-FSGSVPAEISQLEHLKVL 178 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~-l~~~~p~~~~~L~~L~~L 178 (710)
.+.|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|++++|. ++...|..+.++++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 4567888888888876666677778888888888888877777777778888888888876 665557777777777777
Q ss_pred EccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCC
Q 005177 179 NLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS 258 (710)
Q Consensus 179 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~ 258 (710)
+|++|.+++..|..|.++++|++|++++|.+++..+..++ ++++|++|++++|+++
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~------------------------~l~~L~~L~l~~n~l~ 166 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFR------------------------DLGNLTHLFLHGNRIS 166 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT------------------------TCTTCCEEECCSSCCC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhc------------------------cCCCccEEECCCCccc
Confidence 7777777776677777777777777777776643333333 3344444444444444
Q ss_pred ccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCc
Q 005177 259 GSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS 330 (710)
Q Consensus 259 g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 330 (710)
+..+..+..+++|+.|++++|.+++..|..+..+++|+.|++++|++++..+..+..+++|+.|++++|.+.
T Consensus 167 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 238 (285)
T 1ozn_A 167 SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (285)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred ccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCcc
Confidence 333334444555555555555555544555555555555555555555444444555555555555555544
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.4e-28 Score=275.97 Aligned_cols=280 Identities=24% Similarity=0.305 Sum_probs=147.2
Q ss_pred CCCCceeeeeee------CCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEEC
Q 005177 59 KIYACSWSGVKC------NKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDI 132 (710)
Q Consensus 59 ~~~~C~w~gv~C------~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 132 (710)
..+||.|.|..| .+....+..+++++++++ .+|..+ .++|++|+|++|.++ .+|. .+++|++|+|
T Consensus 18 ~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l----~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L 88 (622)
T 3g06_A 18 AAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCL----PAHITTLVIPDNNLT-SLPA---LPPELRTLEV 88 (622)
T ss_dssp TCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCC----CTTCSEEEECSCCCS-CCCC---CCTTCCEEEE
T ss_pred cCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhh----CCCCcEEEecCCCCC-CCCC---cCCCCCEEEc
Confidence 456899976532 111123556666666665 555544 246677777777665 3444 4566777777
Q ss_pred cCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCC
Q 005177 133 SRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQ 212 (710)
Q Consensus 133 s~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 212 (710)
++|++++ +|. .+++|++|+|++|.+++ +|. .+++|+.|++++|++++ +|.. +++|++|++++|.+++
T Consensus 89 s~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~- 155 (622)
T 3g06_A 89 SGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS- 155 (622)
T ss_dssp CSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-
T ss_pred CCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-
Confidence 7776663 443 55666777777766664 333 45666667777666664 4442 3666666666666653
Q ss_pred CcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCC
Q 005177 213 IPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRV 292 (710)
Q Consensus 213 ~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l 292 (710)
+|. .+.+|+.|++++|.+++ +| ..+++|+.|++++|++++ +|.. +++|+.|++++|.++. +|. .+
T Consensus 156 l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~---~~ 220 (622)
T 3g06_A 156 LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPA---LP 220 (622)
T ss_dssp CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CCC---CC
T ss_pred cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cCC---CC
Confidence 332 22445555555555543 33 234455555555555543 2221 2445555555555542 222 12
Q ss_pred CCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEEC
Q 005177 293 TTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDV 372 (710)
Q Consensus 293 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~l 372 (710)
++|+.|++++|++++ +| ..+++|+.|+|++|+++ .+|. .+++|+.|+|++|+++ .+|..+..+++|+.|++
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L 291 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 291 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEEC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEe
Confidence 445555555555543 33 23344555555555554 2333 3344555555555554 44444555555555555
Q ss_pred CCCcCCccCccc
Q 005177 373 STNNFNGSIPPD 384 (710)
Q Consensus 373 s~N~l~g~ip~~ 384 (710)
++|.+++.+|..
T Consensus 292 ~~N~l~~~~~~~ 303 (622)
T 3g06_A 292 EGNPLSERTLQA 303 (622)
T ss_dssp CSCCCCHHHHHH
T ss_pred cCCCCCCcCHHH
Confidence 555555444443
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-28 Score=255.93 Aligned_cols=206 Identities=21% Similarity=0.208 Sum_probs=161.6
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCC-CCCCCChhhcCCCCCCEE
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNN-FSGHFPGGIQSLRNLLVL 154 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~l~~L~~L~~L 154 (710)
.++.++++++.+.+..+..+.. +++|++|+|++|.+++..|..|.++++|++|+|++|. +....|..+..+++|++|
T Consensus 33 ~l~~L~l~~n~i~~~~~~~~~~--~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 33 ASQRIFLHGNRISHVPAASFRA--CRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp TCSEEECTTSCCCEECTTTTTT--CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CceEEEeeCCcCCccCHHHccc--CCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 5788999999998876666777 8999999999999998889999999999999999997 887778899999999999
Q ss_pred ECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccccccccccccccccccc
Q 005177 155 DAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQ 234 (710)
Q Consensus 155 ~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~ 234 (710)
++++|.+++..|..+.++++|++|+|++|.+++..+..|+.+++|++|++++|.+++..+..+..+++|+.|++++|.+
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l- 189 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRV- 189 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC-
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcc-
Confidence 9999999998899999999999999999999987777899999999999999998865544455555555555555544
Q ss_pred ccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCC
Q 005177 235 GNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG 307 (710)
Q Consensus 235 g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 307 (710)
++..|..+..+++|+.|++++|.+++..+..+..+++|+.|++++|.+..
T Consensus 190 -----------------------~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 190 -----------------------AHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp -----------------------CEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred -----------------------cccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccC
Confidence 44444445555555555555555554444445555555555555555544
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-27 Score=264.34 Aligned_cols=243 Identities=21% Similarity=0.253 Sum_probs=215.0
Q ss_pred ECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCC
Q 005177 107 NLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFS 186 (710)
Q Consensus 107 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~ 186 (710)
+.+++.++ .+|..+. +++++|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+++
T Consensus 49 ~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~ 125 (440)
T 3zyj_A 49 ICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLT 125 (440)
T ss_dssp ECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCS
T ss_pred EeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCC
Confidence 33344443 5566554 68999999999999988899999999999999999999888899999999999999999999
Q ss_pred CCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCC-ccccCCCccchhccccccCCccCchhc
Q 005177 187 GPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIP-WQLGNMSEVQYLDIAGANLSGSIPKEL 265 (710)
Q Consensus 187 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p-~~l~~l~~L~~L~ls~n~l~g~~p~~l 265 (710)
+..+..|.++++|++|+|++|.++...+..+..+++|+.|+++.|...+.++ ..+.++++|++|++++|+++ .+| .+
T Consensus 126 ~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~ 203 (440)
T 3zyj_A 126 TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NL 203 (440)
T ss_dssp SCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CC
T ss_pred eeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-cc
Confidence 7777789999999999999999998777789999999999999965555555 46889999999999999998 455 48
Q ss_pred cCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcE
Q 005177 266 SNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEI 345 (710)
Q Consensus 266 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 345 (710)
..+++|+.|+|++|.+++..|..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+++|+.
T Consensus 204 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 283 (440)
T 3zyj_A 204 TPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLER 283 (440)
T ss_dssp TTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCE
T ss_pred CCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCE
Confidence 88999999999999999988999999999999999999999988999999999999999999999877788899999999
Q ss_pred EeccCCCCC
Q 005177 346 LFIWNNYFS 354 (710)
Q Consensus 346 L~L~~N~l~ 354 (710)
|+|++|.+.
T Consensus 284 L~L~~Np~~ 292 (440)
T 3zyj_A 284 IHLHHNPWN 292 (440)
T ss_dssp EECCSSCEE
T ss_pred EEcCCCCcc
Confidence 999999875
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.95 E-value=2.3e-31 Score=295.20 Aligned_cols=326 Identities=17% Similarity=0.177 Sum_probs=186.0
Q ss_pred cEEEEEcCCCCCcccCCcc-hhhhcCCCCcEEECCCCcCcc----cCCccccCCCCCcEEECcCCCCCCCCChhh-cCCC
Q 005177 76 IVVGINLSMKGLSGALPGK-PLRIFFNELVDLNLSHNSFSG----QFPVEIFNLTSLISLDISRNNFSGHFPGGI-QSLR 149 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~-~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l-~~L~ 149 (710)
+++.++++++.++...... +.. +++|++|+|++|.+++ .+|..+..+++|++|+|++|.+++..+..+ ..++
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~--~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~ 81 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPL--LQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ 81 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHH--HTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC
T ss_pred cceehhhhhcccCchhHHHHHhh--cCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHh
Confidence 3556666666665432222 222 5667777777777653 345556666777777777776655433333 2344
Q ss_pred ----CCCEEECCCCCCCc----CCchhccCCCCCCEEEccCCCCCCCCCccc-----CCCCCCCeEEecCCcCCCC----
Q 005177 150 ----NLLVLDAFSNSFSG----SVPAEISQLEHLKVLNLAGSYFSGPIPSQF-----GSFKSLEFLHLAGNLLNDQ---- 212 (710)
Q Consensus 150 ----~L~~L~L~~N~l~~----~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~---- 212 (710)
+|++|+|++|.++. .+|..+..+++|++|+|++|.+++..+..+ ...++|++|++++|.+++.
T Consensus 82 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 161 (461)
T 1z7x_W 82 TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEP 161 (461)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH
T ss_pred hCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHH
Confidence 57777777777663 446666777777777777776654322222 2245677777777766653
Q ss_pred CcccccccccccccccccccccccCCcccc-----CCCccchhccccccCCcc----CchhccCCCCCcEEEccccccCC
Q 005177 213 IPAELGMLKTVTHMEIGYNFYQGNIPWQLG-----NMSEVQYLDIAGANLSGS----IPKELSNLTKLESLFLFRNQLAG 283 (710)
Q Consensus 213 ~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~-----~l~~L~~L~ls~n~l~g~----~p~~l~~l~~L~~L~L~~n~l~~ 283 (710)
++..+..+++|++|++++|.+....+..+. ..++|++|++++|.+++. ++..+..+++|+.|++++|.+++
T Consensus 162 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~ 241 (461)
T 1z7x_W 162 LASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241 (461)
T ss_dssp HHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHH
T ss_pred HHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCCh
Confidence 244455566677777777666543333222 244666677777666643 45555566666777776666654
Q ss_pred CC-----CccccCCCCCCEEEccCCCCCCC----CCccccCCCCCCEEEcccccCcccCCcccC-----CCCCCcEEecc
Q 005177 284 QV-----PWEFSRVTTLKSLDLSDNRLSGP----IPESFADLKNLRLLSLMYNEMSGTVPESLV-----QLPSLEILFIW 349 (710)
Q Consensus 284 ~~-----p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-----~l~~L~~L~L~ 349 (710)
.. +..+..+++|++|++++|+++.. ++..+..+++|+.|++++|.+++..+..+. ..++|++|+++
T Consensus 242 ~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~ 321 (461)
T 1z7x_W 242 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVK 321 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred HHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcC
Confidence 21 11222456666666666666543 455555666666666666666543332222 12466666666
Q ss_pred CCCCCCC----CCcccCCCCCCcEEECCCCcCCccCcccccC-----CCceeeEecccCCccc
Q 005177 350 NNYFSGS----LPENLGRNSKLRWVDVSTNNFNGSIPPDICS-----GGVLFKLILFSNNFTG 403 (710)
Q Consensus 350 ~N~l~g~----~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~-----~~~L~~l~l~~N~l~g 403 (710)
+|.+++. +|..+..+++|+.|++++|.+++..+..++. .+.|++|++++|.+++
T Consensus 322 ~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~ 384 (461)
T 1z7x_W 322 SCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSD 384 (461)
T ss_dssp TSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCH
T ss_pred CCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCCh
Confidence 6666543 3444555566666666666665544443332 4466666666666654
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.9e-30 Score=269.02 Aligned_cols=169 Identities=21% Similarity=0.169 Sum_probs=76.6
Q ss_pred cEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCC
Q 005177 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 183 (710)
Q Consensus 104 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n 183 (710)
+.++++.+.+...++..+..+++|++|+|++|++++..|..|.++++|++|+|++|.+++..| +..+++|++|+|++|
T Consensus 13 ~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n 90 (317)
T 3o53_A 13 KIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNN 90 (317)
T ss_dssp EEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSS
T ss_pred eEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCC
Confidence 344444554443333333344555555555555555555555555555555555555554333 555555555555555
Q ss_pred CCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCch
Q 005177 184 YFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPK 263 (710)
Q Consensus 184 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~ 263 (710)
++++. | ..++|++|++++|.+++..+.. +++|+.|++++|.+++..|..++.+++|++|++++|++++..+.
T Consensus 91 ~l~~l-~----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 162 (317)
T 3o53_A 91 YVQEL-L----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFA 162 (317)
T ss_dssp EEEEE-E----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGG
T ss_pred ccccc-c----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHH
Confidence 55432 1 2255555555555554332221 22333333333333333333333334444444444444433333
Q ss_pred hc-cCCCCCcEEEccccccC
Q 005177 264 EL-SNLTKLESLFLFRNQLA 282 (710)
Q Consensus 264 ~l-~~l~~L~~L~L~~n~l~ 282 (710)
.+ ..+++|++|++++|.++
T Consensus 163 ~~~~~l~~L~~L~L~~N~l~ 182 (317)
T 3o53_A 163 ELAASSDTLEHLNLQYNFIY 182 (317)
T ss_dssp GGGGGTTTCCEEECTTSCCC
T ss_pred HHhhccCcCCEEECCCCcCc
Confidence 32 13344444444444443
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.95 E-value=5.6e-31 Score=292.09 Aligned_cols=327 Identities=17% Similarity=0.145 Sum_probs=261.6
Q ss_pred cEEEEEcCCCCCcc----cCCcchhhhcCCCCcEEECCCCcCcccCCcccc-CCC----CCcEEECcCCCCCC----CCC
Q 005177 76 IVVGINLSMKGLSG----ALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIF-NLT----SLISLDISRNNFSG----HFP 142 (710)
Q Consensus 76 ~v~~l~l~~~~l~g----~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~----~L~~L~Ls~N~l~~----~~p 142 (710)
.+..++++++++.+ .++..+.. +++|++|+|++|.+.+..+..+. .++ +|++|+|++|+++. .+|
T Consensus 29 ~L~~L~L~~~~l~~~~~~~l~~~l~~--~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~ 106 (461)
T 1z7x_W 29 QCQVVRLDDCGLTEARCKDISSALRV--NPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLS 106 (461)
T ss_dssp TCSEEEEESSCCCHHHHHHHHHHHHT--CTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CccEEEccCCCCCHHHHHHHHHHHHh--CCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHH
Confidence 46778888888874 34444555 78999999999999865554444 355 79999999999984 568
Q ss_pred hhhcCCCCCCEEECCCCCCCcCCchhcc-----CCCCCCEEEccCCCCCCC----CCcccCCCCCCCeEEecCCcCCCCC
Q 005177 143 GGIQSLRNLLVLDAFSNSFSGSVPAEIS-----QLEHLKVLNLAGSYFSGP----IPSQFGSFKSLEFLHLAGNLLNDQI 213 (710)
Q Consensus 143 ~~l~~L~~L~~L~L~~N~l~~~~p~~~~-----~L~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~ 213 (710)
..+..+++|++|+|++|.+++..+..+. ..++|++|+|++|.+++. ++..+..+++|+.|++++|.+++..
T Consensus 107 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~ 186 (461)
T 1z7x_W 107 STLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAG 186 (461)
T ss_dssp HHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHH
T ss_pred HHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHH
Confidence 8899999999999999999865444433 367899999999999864 3566777899999999999987654
Q ss_pred cccccc-----ccccccccccccccccc----CCccccCCCccchhccccccCCccC-----chhccCCCCCcEEEcccc
Q 005177 214 PAELGM-----LKTVTHMEIGYNFYQGN----IPWQLGNMSEVQYLDIAGANLSGSI-----PKELSNLTKLESLFLFRN 279 (710)
Q Consensus 214 p~~l~~-----l~~L~~L~l~~n~~~g~----~p~~l~~l~~L~~L~ls~n~l~g~~-----p~~l~~l~~L~~L~L~~n 279 (710)
+..+.. .++|++|++++|.+++. ++..+..+++|+.|++++|.+++.. +..+..+++|++|++++|
T Consensus 187 ~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n 266 (461)
T 1z7x_W 187 VRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWEC 266 (461)
T ss_dssp HHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTS
T ss_pred HHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCC
Confidence 544432 56999999999998864 5777888999999999999987542 223346899999999999
Q ss_pred ccCCC----CCccccCCCCCCEEEccCCCCCCCCCccccC-----CCCCCEEEcccccCccc----CCcccCCCCCCcEE
Q 005177 280 QLAGQ----VPWEFSRVTTLKSLDLSDNRLSGPIPESFAD-----LKNLRLLSLMYNEMSGT----VPESLVQLPSLEIL 346 (710)
Q Consensus 280 ~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L 346 (710)
.+++. ++..+..+++|++|++++|.+.+..+..+.. .++|+.|++++|.+++. ++..+..+++|++|
T Consensus 267 ~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L 346 (461)
T 1z7x_W 267 GITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLEL 346 (461)
T ss_dssp CCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEE
T ss_pred CCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEE
Confidence 99864 5667778999999999999987654444433 36999999999999875 56777788999999
Q ss_pred eccCCCCCCCCCcccCC-----CCCCcEEECCCCcCCc----cCcccccCCCceeeEecccCCcccc
Q 005177 347 FIWNNYFSGSLPENLGR-----NSKLRWVDVSTNNFNG----SIPPDICSGGVLFKLILFSNNFTGI 404 (710)
Q Consensus 347 ~L~~N~l~g~~p~~l~~-----~~~L~~L~ls~N~l~g----~ip~~~~~~~~L~~l~l~~N~l~g~ 404 (710)
++++|.+++..+..+.. .++|+.|++++|.+++ .+|..+..+++|++|++++|++++.
T Consensus 347 ~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 347 QISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp ECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred EccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHH
Confidence 99999988654444432 6799999999999996 7898888899999999999999875
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.5e-29 Score=262.79 Aligned_cols=258 Identities=16% Similarity=0.140 Sum_probs=176.9
Q ss_pred CCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEec
Q 005177 126 SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLA 205 (710)
Q Consensus 126 ~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 205 (710)
+++.++++.+.+...++..+..+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..| +..+++|++|+++
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 45667888888876666667778899999999999998888899999999999999999987654 8999999999999
Q ss_pred CCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCC
Q 005177 206 GNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQV 285 (710)
Q Consensus 206 ~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~ 285 (710)
+|.+++. ...++|++|++++|.+++..+. .+++|+.|++++|++++..+..+..+++|++|++++|.+++..
T Consensus 89 ~n~l~~l-----~~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 89 NNYVQEL-----LVGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp SSEEEEE-----EECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred CCccccc-----cCCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 9988742 2336777777777776654433 2455666677777666655556666666666666666666655
Q ss_pred Cccc-cCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCC
Q 005177 286 PWEF-SRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN 364 (710)
Q Consensus 286 p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~ 364 (710)
+..+ ..+++|++|++++|++++. | ....+++|+.|+|++|++++ +|..+..+++|++|++++|.++ .+|..+..+
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l 236 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFS 236 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCC
T ss_pred HHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcC
Confidence 5444 3566666666666666643 2 22235666666666666664 3344666666666666666666 355556666
Q ss_pred CCCcEEECCCCcCC-ccCcccccCCCceeeEecc
Q 005177 365 SKLRWVDVSTNNFN-GSIPPDICSGGVLFKLILF 397 (710)
Q Consensus 365 ~~L~~L~ls~N~l~-g~ip~~~~~~~~L~~l~l~ 397 (710)
++|+.|++++|.++ +.+|..+..++.|+.+++.
T Consensus 237 ~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 237 QNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp TTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred CCCCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 66666666666666 5555555555555555544
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-28 Score=272.14 Aligned_cols=236 Identities=20% Similarity=0.161 Sum_probs=168.2
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..| ++.+++|++|+|++|.+++.. ..++|++|+
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~ 105 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLH 105 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEEE
Confidence 4489999999999999888899999999999999999998776 999999999999999998633 238999999
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCcccc-CCCccchhccccccCC
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLG-NMSEVQYLDIAGANLS 258 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~-~l~~L~~L~ls~n~l~ 258 (710)
|++|.+++..+. .+++|+.|+|++|.+++..|..++.+++|+.|++++|.+++.+|..+. .+++|+.|++++|.++
T Consensus 106 L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~ 182 (487)
T 3oja_A 106 AANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (487)
T ss_dssp CCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred CcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccc
Confidence 999999976654 468899999999999988887777777777777777777666665554 5666666666666665
Q ss_pred ccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCc-ccCCccc
Q 005177 259 GSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS-GTVPESL 337 (710)
Q Consensus 259 g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-g~~p~~~ 337 (710)
+..+ ...+++|+.|+|++|.+++..| .+..+++|+.|+|++|.+++ +|..+..+++|+.|++++|.+. +.+|.++
T Consensus 183 ~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~ 258 (487)
T 3oja_A 183 DVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFF 258 (487)
T ss_dssp EEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHH
T ss_pred cccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHH
Confidence 4421 2235555566665555554332 35555555555555555553 4445555555555555555554 4444555
Q ss_pred CCCCCCcEEecc
Q 005177 338 VQLPSLEILFIW 349 (710)
Q Consensus 338 ~~l~~L~~L~L~ 349 (710)
..++.|+.++++
T Consensus 259 ~~l~~L~~l~~~ 270 (487)
T 3oja_A 259 SKNQRVQTVAKQ 270 (487)
T ss_dssp TTCHHHHHHHHH
T ss_pred HhCCCCcEEecc
Confidence 555555554443
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.5e-26 Score=260.31 Aligned_cols=268 Identities=22% Similarity=0.262 Sum_probs=228.6
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEc
Q 005177 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L 180 (710)
..++.|++++|.++ .+|..+. ++|++|+|++|+++ .+|. .+++|++|+|++|++++ +|. .+++|++|+|
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEEC
Confidence 46999999999998 7888776 89999999999998 4665 68999999999999984 666 7899999999
Q ss_pred cCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCcc
Q 005177 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS 260 (710)
Q Consensus 181 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~ 260 (710)
++|++++ +|. .+++|+.|++++|.+++ +|.. +++|++|++++|.+++ +|. .+++|+.|++++|++++
T Consensus 109 s~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~- 175 (622)
T 3g06_A 109 FSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS- 175 (622)
T ss_dssp CSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-
T ss_pred cCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-
Confidence 9999986 555 67899999999999985 6654 4899999999999885 454 34678999999999985
Q ss_pred CchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCC
Q 005177 261 IPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQL 340 (710)
Q Consensus 261 ~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 340 (710)
+| ..+++|+.|++++|.+++ +|.. +++|+.|++++|.++. +|.. +++|+.|+|++|++++ +| ..+
T Consensus 176 l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N~L~~-lp---~~l 240 (622)
T 3g06_A 176 LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LP---VLP 240 (622)
T ss_dssp CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CC---CCC
T ss_pred Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cCCC---CCCCCEEEccCCccCc-CC---CCC
Confidence 55 457899999999999986 4433 4789999999999984 5543 4789999999999996 66 556
Q ss_pred CCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecccCCcccchhHHHHHH
Q 005177 341 PSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIVMFIAAAL 412 (710)
Q Consensus 341 ~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~l~g~i~~~~~~~ 412 (710)
++|+.|++++|.++ .+|. .+++|+.|++++|+++ .+|..+..+++|+.|++++|.+++.+|-.+.-+
T Consensus 241 ~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 241 SELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 307 (622)
T ss_dssp TTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHH
T ss_pred CcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhc
Confidence 89999999999999 5676 5688999999999999 889999999999999999999999887655433
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.4e-26 Score=235.03 Aligned_cols=144 Identities=25% Similarity=0.275 Sum_probs=76.7
Q ss_pred CCceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCC
Q 005177 61 YACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGH 140 (710)
Q Consensus 61 ~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 140 (710)
+.|.|.|+.|... ..+..++++++++.. +|..+ .+.|++|+|++|.+++..+..|.++++|++|+|++|.++..
T Consensus 3 ~~C~~~~~~C~c~-~~~~~l~~~~~~l~~-ip~~~----~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i 76 (270)
T 2o6q_A 3 ALCKKDGGVCSCN-NNKNSVDCSSKKLTA-IPSNI----PADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTL 76 (270)
T ss_dssp CCBGGGTCSBEEE-TTTTEEECTTSCCSS-CCSCC----CTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCC
T ss_pred ccCCCCCCCCEeC-CCCCEEEccCCCCCc-cCCCC----CCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCee
Confidence 6899999999762 223345555555542 33332 23455555555555544444555555555555555555544
Q ss_pred CChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCC
Q 005177 141 FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLN 210 (710)
Q Consensus 141 ~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 210 (710)
.+..|.++++|++|+|++|.+++..+..+.++++|++|+|++|.+++..|..|.++++|++|++++|.++
T Consensus 77 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 146 (270)
T 2o6q_A 77 PAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ 146 (270)
T ss_dssp CTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred ChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCC
Confidence 4444455555555555555555444444455555555555555555444444455555555555554443
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.7e-28 Score=277.47 Aligned_cols=181 Identities=14% Similarity=0.063 Sum_probs=124.1
Q ss_pred hcCCCCCccEEEE-cCCCcEEEEEEeeccc-----------hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEE
Q 005177 454 AARPQSAAGCKAV-LPTGITVSVKKIEWGA-----------TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 454 ig~g~~g~vy~~~-~~~g~~vAvK~l~~~~-----------~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 520 (710)
...|.+|.++++. ...|+.+|||.+.... ...++|.+|+++|+++ .|+||+++++++.+++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 3445555444433 3568899999997531 1246799999999999 6999999999999999999999
Q ss_pred eecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCc
Q 005177 521 DYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFP 600 (710)
Q Consensus 521 Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~ 600 (710)
||++||+|.++|........ .+|+.||+.||+|+|+. +||||||||+|||+++++.+||+|||+|+..........
T Consensus 322 Eyv~G~~L~d~i~~~~~l~~-~~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~~ 397 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGEEIDR-EKILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPT 397 (569)
T ss_dssp ECCCSEEHHHHHHTTCCCCH-HHHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCSH
T ss_pred ecCCCCcHHHHHHhCCCCCH-HHHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCCCcccc
Confidence 99999999999987443333 36899999999999999 999999999999999999999999999987653322221
Q ss_pred --ccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCC
Q 005177 601 --AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRL 639 (710)
Q Consensus 601 --~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p 639 (710)
.++++|++||...+ .+..++|+||.|++++++.++..+
T Consensus 398 t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 398 NLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp HHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 14555777887754 456679999999998888766444
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-25 Score=229.89 Aligned_cols=205 Identities=25% Similarity=0.269 Sum_probs=130.8
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEc
Q 005177 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L 180 (710)
+.|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..+.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 36888899988888776668888888888888888888777778888888888888888888777778888888888888
Q ss_pred cCCCCCCCCCcccCCCCCCCeEEecCCcCCCC-CcccccccccccccccccccccccCCccccCCCccchhccccccCCc
Q 005177 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQ-IPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (710)
Q Consensus 181 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g 259 (710)
++|.+++..+..++++++|++|++++|.+++. +|..++.+++ |++|++++|++++
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~------------------------L~~L~Ls~N~l~~ 163 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTN------------------------LEHLDLSSNKIQS 163 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTT------------------------CCEEECCSSCCCE
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCC------------------------CCEEECCCCCCCc
Confidence 88888876666788888888888888877642 3444444444 4444444444443
Q ss_pred cCchhccCCCCCc----EEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCc
Q 005177 260 SIPKELSNLTKLE----SLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS 330 (710)
Q Consensus 260 ~~p~~l~~l~~L~----~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 330 (710)
..+..+..+++|+ .|++++|.+++..+..+.. .+|+.|++++|++++..+..|..+++|+.|++++|.+.
T Consensus 164 ~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 237 (276)
T 2z62_A 164 IYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 237 (276)
T ss_dssp ECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBC
T ss_pred CCHHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCccc
Confidence 3333333333333 4455555544333322222 24444555544444433333444444444444444444
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.9e-25 Score=228.75 Aligned_cols=211 Identities=23% Similarity=0.251 Sum_probs=171.9
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEE
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 155 (710)
.++.++++++.+.+..+..+.. +++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~--l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFS--FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTT--CTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred CccEEECCCCcccccCHhHhcc--ccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEE
Confidence 4788999999998776667777 89999999999999987777899999999999999999998889999999999999
Q ss_pred CCCCCCCcCCchhccCCCCCCEEEccCCCCCC-CCCcccCCCCCCCeEEecCCcCCCCCccccccccccccccccccccc
Q 005177 156 AFSNSFSGSVPAEISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQ 234 (710)
Q Consensus 156 L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~ 234 (710)
+++|.+++..+..+.++++|++|+|++|.+++ .+|..|.++++|+.|++++|.+++..+..+..+.+|+.+.+
T Consensus 107 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l------ 180 (276)
T 2z62_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL------ 180 (276)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCE------
T ss_pred CCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccce------
Confidence 99999998777789999999999999999987 46999999999999999999998877776666655552211
Q ss_pred ccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCC
Q 005177 235 GNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPI 309 (710)
Q Consensus 235 g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 309 (710)
.|++++|.+++..+..+. ..+|+.|++++|++++..+..+..+++|+.|++++|.+.+..
T Consensus 181 --------------~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 240 (276)
T 2z62_A 181 --------------SLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 240 (276)
T ss_dssp --------------EEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCT
T ss_pred --------------eeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccC
Confidence 456666666644443333 346777777777777665556677777777888777776543
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.92 E-value=5.4e-25 Score=226.26 Aligned_cols=227 Identities=26% Similarity=0.310 Sum_probs=133.0
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEcc
Q 005177 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (710)
Q Consensus 102 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~ 181 (710)
++..+++..+.+.... .+..+++|+.|++++|.++. ++ .+..+++|++|++++|.+++ + +.+.++++|++|+|+
T Consensus 20 ~l~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~ 93 (272)
T 3rfs_A 20 ETIKANLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILT 93 (272)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCCC-CT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECT
T ss_pred HHHHHHhcCccccccc--ccccccceeeeeeCCCCccc-cc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECC
Confidence 3445556666554332 34566677777777777653 22 46667777777777777765 2 356677777777777
Q ss_pred CCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccC
Q 005177 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261 (710)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~ 261 (710)
+|.+++..|..|.++++|++|++++|.+++..|..++.+ ++|++|++++|++++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l------------------------~~L~~L~L~~n~l~~~~ 149 (272)
T 3rfs_A 94 GNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKL------------------------TNLTYLNLAHNQLQSLP 149 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTC------------------------TTCCEEECCSSCCCCCC
T ss_pred CCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccC------------------------CCCCEEECCCCccCccC
Confidence 777776666666777777777777776665444333333 34444444444444444
Q ss_pred chhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCC
Q 005177 262 PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLP 341 (710)
Q Consensus 262 p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 341 (710)
+..+..+++|+.|++++|++++..+..+..+++|+.|++++|++++..|..+..+++|+.|++++|.+.+. ++
T Consensus 150 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~ 222 (272)
T 3rfs_A 150 KGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CP 222 (272)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TT
T ss_pred HHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------Cc
Confidence 44445555555555555555554444455555666666666666655555556666666666666655432 34
Q ss_pred CCcEEeccCCCCCCCCCcccCCCC
Q 005177 342 SLEILFIWNNYFSGSLPENLGRNS 365 (710)
Q Consensus 342 ~L~~L~L~~N~l~g~~p~~l~~~~ 365 (710)
+|+.|+++.|.++|.+|.+++.+.
T Consensus 223 ~l~~l~~~~n~~~g~ip~~~~~~~ 246 (272)
T 3rfs_A 223 GIRYLSEWINKHSGVVRNSAGSVA 246 (272)
T ss_dssp TTHHHHHHHHHTGGGBBCTTSCBC
T ss_pred HHHHHHHHHHhCCCcccCcccccC
Confidence 566666666666666666655543
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-24 Score=223.27 Aligned_cols=208 Identities=23% Similarity=0.278 Sum_probs=170.8
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
++.|+.|++++|.+.. ++ .+..+++|++|+|++|.+++. ..+..+++|++|+|++|.+++..|..+.++++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~-~~-~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 115 (272)
T 3rfs_A 40 LNSIDQIIANNSDIKS-VQ-GIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELV 115 (272)
T ss_dssp HTTCCEEECTTSCCCC-CT-TGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccceeeeeeCCCCccc-cc-ccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEE
Confidence 7899999999999873 33 588999999999999999873 4789999999999999999988888899999999999
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCc
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g 259 (710)
|++|++++..|..|+++++|++|++++|.+++..|..++ ++++|+.|++++|++++
T Consensus 116 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~------------------------~l~~L~~L~l~~n~l~~ 171 (272)
T 3rfs_A 116 LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFD------------------------KLTNLTELDLSYNQLQS 171 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT------------------------TCTTCCEEECCSSCCCC
T ss_pred CCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhc------------------------cCccCCEEECCCCCcCc
Confidence 999999988888899999999999999998865444343 45556666666666666
Q ss_pred cCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCC
Q 005177 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (710)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 339 (710)
..+..+..+++|+.|++++|++++..|..+..+++|+.|++++|.+.+. +++|+.|+++.|.++|.+|.+++.
T Consensus 172 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~ 244 (272)
T 3rfs_A 172 LPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGS 244 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSC
T ss_pred cCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccc
Confidence 6666667777888888888888877776777888888888888877654 446888888888888888888877
Q ss_pred CCC
Q 005177 340 LPS 342 (710)
Q Consensus 340 l~~ 342 (710)
++.
T Consensus 245 ~~~ 247 (272)
T 3rfs_A 245 VAP 247 (272)
T ss_dssp BCG
T ss_pred cCC
Confidence 654
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.1e-24 Score=226.37 Aligned_cols=227 Identities=22% Similarity=0.203 Sum_probs=160.2
Q ss_pred CCCcEEECCCCcCcccCCc---cccCCCCCcEEECcCCCCCCCCChhh--cCCCCCCEEECCCCCCCcCCc----hhccC
Q 005177 101 NELVDLNLSHNSFSGQFPV---EIFNLTSLISLDISRNNFSGHFPGGI--QSLRNLLVLDAFSNSFSGSVP----AEISQ 171 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~---~~~~l~~L~~L~Ls~N~l~~~~p~~l--~~L~~L~~L~L~~N~l~~~~p----~~~~~ 171 (710)
..++.|++.++.++...-. .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..| ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 3567777777776532111 12345668888888888888777777 778888888888888876554 34456
Q ss_pred CCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCC--CcccccccccccccccccccccccCCccccCCCccch
Q 005177 172 LEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQ--IPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQY 249 (710)
Q Consensus 172 L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~ 249 (710)
+++|++|+|++|.+++..|..|+++++|++|+|++|++.+. ++. +..++.+++|++
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~----------------------~~~~~~l~~L~~ 201 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMA----------------------ALCPHKFPAIQN 201 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHT----------------------TSCTTSSCCCCS
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhH----------------------HHhhhcCCCCCE
Confidence 77888888888888777777777788888888887776532 111 112345666777
Q ss_pred hccccccCCccCch----hccCCCCCcEEEccccccCCCCCccccCC---CCCCEEEccCCCCCCCCCccccCCCCCCEE
Q 005177 250 LDIAGANLSGSIPK----ELSNLTKLESLFLFRNQLAGQVPWEFSRV---TTLKSLDLSDNRLSGPIPESFADLKNLRLL 322 (710)
Q Consensus 250 L~ls~n~l~g~~p~----~l~~l~~L~~L~L~~n~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 322 (710)
|++++|+++. ++. .+..+++|++|+|++|++++..|..+..+ ++|++|+|++|+++ .+|..+. ++|+.|
T Consensus 202 L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L 277 (310)
T 4glp_A 202 LALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVL 277 (310)
T ss_dssp CBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCE
T ss_pred EECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEE
Confidence 7777777752 222 24667888888888888887777666665 58888888888888 5676664 788899
Q ss_pred EcccccCcccCCcccCCCCCCcEEeccCCCCCC
Q 005177 323 SLMYNEMSGTVPESLVQLPSLEILFIWNNYFSG 355 (710)
Q Consensus 323 ~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g 355 (710)
+|++|++++. |. +..+++|+.|++++|+++.
T Consensus 278 ~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 278 DLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp ECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred ECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 9999988863 43 6778889999999998874
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-23 Score=213.71 Aligned_cols=109 Identities=18% Similarity=0.195 Sum_probs=76.1
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEcc
Q 005177 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (710)
Q Consensus 102 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~ 181 (710)
..+.+++++|.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.++...+..|.++++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 4677888888876 4665543 567788888887776666677777777777777777775545556777777777777
Q ss_pred CCCCCCCCCcccCCCCCCCeEEecCCcCCCCC
Q 005177 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQI 213 (710)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 213 (710)
+|.+++..+..|.++++|++|++++|.+++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 125 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLP 125 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeC
Confidence 77777655556666777777777766665433
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.91 E-value=4.9e-26 Score=241.41 Aligned_cols=237 Identities=17% Similarity=0.220 Sum_probs=133.3
Q ss_pred CCceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCC
Q 005177 61 YACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGH 140 (710)
Q Consensus 61 ~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 140 (710)
.|.+|.++.|+. ..+..++++.+.+.. ..+.....+.++.|++++|.+.+..|. +..+++|++|+|++|.+++.
T Consensus 35 vc~~W~~~~~~~--~~~~~l~l~~~~~~~---~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~ 108 (336)
T 2ast_B 35 VCKRWYRLASDE--SLWQTLDLTGKNLHP---DVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVS 108 (336)
T ss_dssp SCHHHHHHHTCS--TTSSEEECTTCBCCH---HHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHH
T ss_pred HHHHHHHHhcCc--hhheeeccccccCCH---HHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHH
Confidence 456899998874 335566776665552 223331125677777777777655443 45667777777777776654
Q ss_pred -CChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCC-CCCCC-CCcccCCCCCCCeEEecCC-cCCCC-Ccc
Q 005177 141 -FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS-YFSGP-IPSQFGSFKSLEFLHLAGN-LLNDQ-IPA 215 (710)
Q Consensus 141 -~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n-~l~~~-~p~~~~~l~~L~~L~L~~N-~l~~~-~p~ 215 (710)
+|..+..+++|++|+|++|.+++..|..++.+++|++|+|++| .+++. +|..+.++++|++|++++| .+++. ++.
T Consensus 109 ~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~ 188 (336)
T 2ast_B 109 TLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQV 188 (336)
T ss_dssp HHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHH
T ss_pred HHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHH
Confidence 6666666777777777777766666666666777777777766 45532 4444555666666666666 55432 222
Q ss_pred cccccccccccccccccccccCCccccCCC-ccchhccccc--cCC-ccCchhccCCCCCcEEEccccc-cCCCCCcccc
Q 005177 216 ELGMLKTVTHMEIGYNFYQGNIPWQLGNMS-EVQYLDIAGA--NLS-GSIPKELSNLTKLESLFLFRNQ-LAGQVPWEFS 290 (710)
Q Consensus 216 ~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~-~L~~L~ls~n--~l~-g~~p~~l~~l~~L~~L~L~~n~-l~~~~p~~~~ 290 (710)
. +..++ +|++|++++| .++ +.+|..+..+++|+.|++++|. +++..+..+.
T Consensus 189 ~------------------------~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~ 244 (336)
T 2ast_B 189 A------------------------VAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFF 244 (336)
T ss_dssp H------------------------HHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGG
T ss_pred H------------------------HHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHh
Confidence 2 33334 4444444444 233 3344444555555555555555 4444444555
Q ss_pred CCCCCCEEEccCCC-CCCCCCccccCCCCCCEEEcccc
Q 005177 291 RVTTLKSLDLSDNR-LSGPIPESFADLKNLRLLSLMYN 327 (710)
Q Consensus 291 ~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N 327 (710)
.+++|++|++++|. +.......++.+++|+.|++++|
T Consensus 245 ~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 245 QLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp GCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 55555555555553 11111113445555555555555
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-23 Score=215.99 Aligned_cols=84 Identities=19% Similarity=0.249 Sum_probs=39.3
Q ss_pred ccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCC
Q 005177 121 IFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLE 200 (710)
Q Consensus 121 ~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 200 (710)
+.++++|+++++++|+++ .+|..+. +++++|+|++|.+++..|..|.++++|++|+|++|.+++..+ .+.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCC
Confidence 344455555555555554 2333322 345555555555554444455555555555555555543211 13444444
Q ss_pred eEEecCCcC
Q 005177 201 FLHLAGNLL 209 (710)
Q Consensus 201 ~L~L~~N~l 209 (710)
+|++++|.+
T Consensus 81 ~L~Ls~N~l 89 (290)
T 1p9a_G 81 TLDLSHNQL 89 (290)
T ss_dssp EEECCSSCC
T ss_pred EEECCCCcC
Confidence 444444444
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-25 Score=241.34 Aligned_cols=251 Identities=21% Similarity=0.210 Sum_probs=139.6
Q ss_pred EECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCC----hhhcCCC-CCCEEECCCCCCCcCCchhccCC-----CCC
Q 005177 106 LNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFP----GGIQSLR-NLLVLDAFSNSFSGSVPAEISQL-----EHL 175 (710)
Q Consensus 106 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~l~~L~-~L~~L~L~~N~l~~~~p~~~~~L-----~~L 175 (710)
++|++|.++|.+|..+...++|++|||++|.+++..+ ..+.+++ +|++|+|++|.+++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4555555555555544444456666666665555444 4455555 56666666665555545444443 556
Q ss_pred CEEEccCCCCCCCCCcccC----CC-CCCCeEEecCCcCCCCCcccccc-----ccccccccccccccccc----CCccc
Q 005177 176 KVLNLAGSYFSGPIPSQFG----SF-KSLEFLHLAGNLLNDQIPAELGM-----LKTVTHMEIGYNFYQGN----IPWQL 241 (710)
Q Consensus 176 ~~L~L~~n~l~~~~p~~~~----~l-~~L~~L~L~~N~l~~~~p~~l~~-----l~~L~~L~l~~n~~~g~----~p~~l 241 (710)
++|+|++|.+++..+..+. .+ ++|++|+|++|.+++..+..+.. .++|++|++++|.++.. ++..+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 6666666655544443222 22 55666666666555444433222 13555555555555432 22223
Q ss_pred cCCC-ccchhccccccCCccCchhcc----CC-CCCcEEEccccccCCC----CCccccC-CCCCCEEEccCCCCCCCCC
Q 005177 242 GNMS-EVQYLDIAGANLSGSIPKELS----NL-TKLESLFLFRNQLAGQ----VPWEFSR-VTTLKSLDLSDNRLSGPIP 310 (710)
Q Consensus 242 ~~l~-~L~~L~ls~n~l~g~~p~~l~----~l-~~L~~L~L~~n~l~~~----~p~~~~~-l~~L~~L~Ls~N~l~~~~p 310 (710)
..++ +|++|++++|++++..+..+. .+ ++|++|+|++|.+++. ++..+.. .++|+.|+|++|.+++..+
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~ 242 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSL 242 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCH
T ss_pred hcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHH
Confidence 3443 677777777777665554333 33 4777777777777653 2333433 3477777777777776443
Q ss_pred ----ccccCCCCCCEEEcccccCccc-------CCcccCCCCCCcEEeccCCCCCCC
Q 005177 311 ----ESFADLKNLRLLSLMYNEMSGT-------VPESLVQLPSLEILFIWNNYFSGS 356 (710)
Q Consensus 311 ----~~~~~l~~L~~L~Ls~N~l~g~-------~p~~~~~l~~L~~L~L~~N~l~g~ 356 (710)
..+..+++|+.|+|++|.+.+. ++..+..+++|+.|++++|.+.+.
T Consensus 243 ~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 243 ENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 3345567777777777774322 233556667777777777776644
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-23 Score=212.58 Aligned_cols=143 Identities=20% Similarity=0.254 Sum_probs=84.5
Q ss_pred CCceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCC
Q 005177 61 YACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGH 140 (710)
Q Consensus 61 ~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 140 (710)
+||.|.|++|.... ..++++++++. .+|..+ .+.++.|+|++|.+++..|..|.++++|++|+|++|.+++.
T Consensus 3 ~Cp~~~gC~C~~~~---~~l~~~~~~l~-~~p~~~----~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 74 (251)
T 3m19_A 3 TCETVTGCTCNEGK---KEVDCQGKSLD-SVPSGI----PADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTL 74 (251)
T ss_dssp -CHHHHSSEEEGGG---TEEECTTCCCS-SCCSCC----CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCC
T ss_pred cCCCCCceEcCCCC---eEEecCCCCcc-ccCCCC----CCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCcc
Confidence 47899999996411 23455555554 233332 23566666666666665555566666666666666666665
Q ss_pred CChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCC
Q 005177 141 FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLND 211 (710)
Q Consensus 141 ~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 211 (710)
.|..|.++++|++|+|++|.+++..|..|..+++|++|+|++|++++..+..|.++++|++|+|++|.+++
T Consensus 75 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 145 (251)
T 3m19_A 75 SAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQS 145 (251)
T ss_dssp CTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCc
Confidence 55556666666666666666665555555666666666666666665444445555555555555555543
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.90 E-value=5.7e-26 Score=245.90 Aligned_cols=255 Identities=20% Similarity=0.247 Sum_probs=164.7
Q ss_pred cCCccccCCCCCcEEECcCCCCCCCCCh----hhcCCCCCCEEECCCC---CCCcCCchhc-------cCCCCCCEEEcc
Q 005177 116 QFPVEIFNLTSLISLDISRNNFSGHFPG----GIQSLRNLLVLDAFSN---SFSGSVPAEI-------SQLEHLKVLNLA 181 (710)
Q Consensus 116 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~----~l~~L~~L~~L~L~~N---~l~~~~p~~~-------~~L~~L~~L~L~ 181 (710)
.++..+..+++|++|+|++|.+++..+. .+..+++|++|+|++| ++++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 3445555666666666666666554332 2445666666666664 3444455444 566777777777
Q ss_pred CCCCCC----CCCcccCCCCCCCeEEecCCcCCCCCcccccc-cccccccccccccccccCCccccCCCccchhcccccc
Q 005177 182 GSYFSG----PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM-LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGAN 256 (710)
Q Consensus 182 ~n~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~-l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~ 256 (710)
+|.+++ .+|..+..+++|++|+|++|.+++..+..+.. +..+ ..|.+.+ ..++|++|++++|+
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l-----~~~~~~~-------~~~~L~~L~L~~n~ 170 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQEL-----AVNKKAK-------NAPPLRSIICGRNR 170 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHH-----HHHHHHH-------TCCCCCEEECCSSC
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHH-----hhhhhcc-------cCCCCcEEECCCCC
Confidence 777665 35556666667777777776664332222221 1000 0111111 11566677777777
Q ss_pred CC-ccCc---hhccCCCCCcEEEccccccC--C---CCCccccCCCCCCEEEccCCCCC----CCCCccccCCCCCCEEE
Q 005177 257 LS-GSIP---KELSNLTKLESLFLFRNQLA--G---QVPWEFSRVTTLKSLDLSDNRLS----GPIPESFADLKNLRLLS 323 (710)
Q Consensus 257 l~-g~~p---~~l~~l~~L~~L~L~~n~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~ 323 (710)
++ +.+| ..+..+++|++|++++|.++ | ..|..+..+++|+.|+|++|.++ +.+|..+..+++|+.|+
T Consensus 171 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~ 250 (386)
T 2ca6_A 171 LENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELG 250 (386)
T ss_dssp CTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEE
T ss_pred CCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEE
Confidence 65 3344 35666778888888888776 2 23436677888888888888885 56777888888888888
Q ss_pred cccccCccc----CCccc--CCCCCCcEEeccCCCCCC----CCCccc-CCCCCCcEEECCCCcCCccCc
Q 005177 324 LMYNEMSGT----VPESL--VQLPSLEILFIWNNYFSG----SLPENL-GRNSKLRWVDVSTNNFNGSIP 382 (710)
Q Consensus 324 Ls~N~l~g~----~p~~~--~~l~~L~~L~L~~N~l~g----~~p~~l-~~~~~L~~L~ls~N~l~g~ip 382 (710)
|++|.+++. +|..+ +.+++|++|+|++|.+++ .+|..+ .++++|+.|++++|.+++..|
T Consensus 251 L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 251 LNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp CTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred CCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 888888765 56666 348889999999999887 477777 567899999999999987664
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.90 E-value=8.3e-23 Score=211.80 Aligned_cols=203 Identities=19% Similarity=0.231 Sum_probs=120.2
Q ss_pred hcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccccccccc
Q 005177 145 IQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVT 224 (710)
Q Consensus 145 l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 224 (710)
++++++|+.+++++|.++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|.+++. |.
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~--------- 72 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QV--------- 72 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-EC---------
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cC---------
Confidence 556677777777777776 4555443 5677777777777766666677777777777777666531 11
Q ss_pred ccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCC
Q 005177 225 HMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNR 304 (710)
Q Consensus 225 ~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 304 (710)
.+.+++|++|++++|+++ .+|..+..+++|++|++++|++++..|..|..+++|++|+|++|+
T Consensus 73 ----------------~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~ 135 (290)
T 1p9a_G 73 ----------------DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNE 135 (290)
T ss_dssp ----------------CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSC
T ss_pred ----------------CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCC
Confidence 133445555555555555 445555556666666666666665555555566666666666666
Q ss_pred CCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCC
Q 005177 305 LSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFN 378 (710)
Q Consensus 305 l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~ 378 (710)
+++..+..|..+++|+.|+|++|++++..+..+..+++|++|+|++|+++ .+|..+....+|+.+++++|.+.
T Consensus 136 l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 136 LKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 66555555555666666666666665443344455566666666666655 45555555555555555555543
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.90 E-value=8.3e-26 Score=244.61 Aligned_cols=257 Identities=17% Similarity=0.171 Sum_probs=191.8
Q ss_pred CCChhhcCCCCCCEEECCCCCCCcCCc----hhccCCCCCCEEEccCC---CCCCCCCccc-------CCCCCCCeEEec
Q 005177 140 HFPGGIQSLRNLLVLDAFSNSFSGSVP----AEISQLEHLKVLNLAGS---YFSGPIPSQF-------GSFKSLEFLHLA 205 (710)
Q Consensus 140 ~~p~~l~~L~~L~~L~L~~N~l~~~~p----~~~~~L~~L~~L~L~~n---~l~~~~p~~~-------~~l~~L~~L~L~ 205 (710)
.++..+..+++|++|+|++|.++...+ ..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 567778889999999999999887644 44678999999999985 4555666555 677888888888
Q ss_pred CCcCCC----CCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEcccccc
Q 005177 206 GNLLND----QIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQL 281 (710)
Q Consensus 206 ~N~l~~----~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l 281 (710)
+|.+++ .+|..+..+++|++|++++|.+++..+..+... |.. +..+++.+ ..++|++|++++|++
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~--l~~--l~~~~~~~-------~~~~L~~L~L~~n~l 171 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARA--LQE--LAVNKKAK-------NAPPLRSIICGRNRL 171 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHH--HHH--HHHHHHHH-------TCCCCCEEECCSSCC
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHH--HHH--Hhhhhhcc-------cCCCCcEEECCCCCC
Confidence 888776 355555555555555555554432222111110 000 00111111 118999999999999
Q ss_pred C-CCCC---ccccCCCCCCEEEccCCCCC--C---CCCccccCCCCCCEEEcccccCc----ccCCcccCCCCCCcEEec
Q 005177 282 A-GQVP---WEFSRVTTLKSLDLSDNRLS--G---PIPESFADLKNLRLLSLMYNEMS----GTVPESLVQLPSLEILFI 348 (710)
Q Consensus 282 ~-~~~p---~~~~~l~~L~~L~Ls~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~----g~~p~~~~~l~~L~~L~L 348 (710)
+ +.+| ..+..+++|++|++++|+++ | .+|..+..+++|+.|+|++|.++ +.+|..+..+++|++|+|
T Consensus 172 ~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L 251 (386)
T 2ca6_A 172 ENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGL 251 (386)
T ss_dssp TGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEEC
T ss_pred CcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEEC
Confidence 7 4455 45678899999999999997 3 34558899999999999999996 678889999999999999
Q ss_pred cCCCCCCC----CCccc--CCCCCCcEEECCCCcCCc----cCcccc-cCCCceeeEecccCCcccchhH
Q 005177 349 WNNYFSGS----LPENL--GRNSKLRWVDVSTNNFNG----SIPPDI-CSGGVLFKLILFSNNFTGIVMF 407 (710)
Q Consensus 349 ~~N~l~g~----~p~~l--~~~~~L~~L~ls~N~l~g----~ip~~~-~~~~~L~~l~l~~N~l~g~i~~ 407 (710)
++|.+++. +|..+ +.+++|+.|++++|.+++ .+|..+ .++++|++|++++|.+++..+.
T Consensus 252 ~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~~ 321 (386)
T 2ca6_A 252 NDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDV 321 (386)
T ss_dssp TTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSHH
T ss_pred CCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchhH
Confidence 99999865 56666 448999999999999998 588888 5579999999999999998763
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-23 Score=220.96 Aligned_cols=225 Identities=17% Similarity=0.138 Sum_probs=160.0
Q ss_pred CCCcEEECcCCCCCCCCCh---hhcCCCCCCEEECCCCCCCcCCchhc--cCCCCCCEEEccCCCCCCCCC----cccCC
Q 005177 125 TSLISLDISRNNFSGHFPG---GIQSLRNLLVLDAFSNSFSGSVPAEI--SQLEHLKVLNLAGSYFSGPIP----SQFGS 195 (710)
Q Consensus 125 ~~L~~L~Ls~N~l~~~~p~---~l~~L~~L~~L~L~~N~l~~~~p~~~--~~L~~L~~L~L~~n~l~~~~p----~~~~~ 195 (710)
..++.|.+.++.++...-. .+..+++|++|++++|.+++..|..+ ..+++|++|+|++|.+++..| ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 3467777777665421100 11234557777777777766666666 666667777777776665444 23345
Q ss_pred CCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCcc--C--chhccCCCCC
Q 005177 196 FKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS--I--PKELSNLTKL 271 (710)
Q Consensus 196 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~--~--p~~l~~l~~L 271 (710)
+++|++|+|++|.+.+.. |..++++++|++|++++|++.+. + +..+..+++|
T Consensus 144 ~~~L~~L~Ls~n~l~~~~------------------------~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L 199 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFS------------------------CEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAI 199 (310)
T ss_dssp CSCCCEEEEECCSSCCCC------------------------TTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCC
T ss_pred ccCCCEEEeeCCCcchhh------------------------HHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCC
Confidence 566666666666655444 44455566667777777766542 2 2234678999
Q ss_pred cEEEccccccCCCCCc----cccCCCCCCEEEccCCCCCCCCCccccCC---CCCCEEEcccccCcccCCcccCCCCCCc
Q 005177 272 ESLFLFRNQLAGQVPW----EFSRVTTLKSLDLSDNRLSGPIPESFADL---KNLRLLSLMYNEMSGTVPESLVQLPSLE 344 (710)
Q Consensus 272 ~~L~L~~n~l~~~~p~----~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 344 (710)
++|++++|+++. ++. .+..+++|++|+|++|++++..|..+..+ ++|+.|+|++|+++ .+|..+. ++|+
T Consensus 200 ~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~ 275 (310)
T 4glp_A 200 QNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLR 275 (310)
T ss_dssp CSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCS
T ss_pred CEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCC
Confidence 999999999973 332 35788999999999999999888888877 69999999999999 6787775 8999
Q ss_pred EEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCc
Q 005177 345 ILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNG 379 (710)
Q Consensus 345 ~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g 379 (710)
+|+|++|++++. |. +..+++|+.|++++|.++.
T Consensus 276 ~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 276 VLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred EEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 999999999964 43 5778999999999999974
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.5e-24 Score=242.09 Aligned_cols=179 Identities=13% Similarity=0.131 Sum_probs=140.2
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccch---------hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---------RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~---------~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 520 (710)
..+.||+|+||.||+|.. .+..+|+|+...... ..+.+.+|++++++++|||||++..++..++..++||
T Consensus 340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 457899999999999954 677899998654211 1455899999999999999997777777888889999
Q ss_pred eecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC---
Q 005177 521 DYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--- 597 (710)
Q Consensus 521 Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--- 597 (710)
||+++|+|.+++.. +..++.|+++||+|||+. +|+||||||+|||++. .+||+|||+++.......
T Consensus 419 E~~~ggsL~~~l~~------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~ 487 (540)
T 3en9_A 419 SYINGKLAKDVIED------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAV 487 (540)
T ss_dssp ECCCSEEHHHHSTT------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHH
T ss_pred ECCCCCCHHHHHHH------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCcccccc
Confidence 99999999999986 668999999999999998 9999999999999998 999999999987643211
Q ss_pred ------CCcccccccCchhhhhc--cCCccccceeeHHHHHHHHHhCCCCC
Q 005177 598 ------SFPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLT 640 (710)
Q Consensus 598 ------~~~~~~~~~~~~e~~~~--~~~~~~~DVySfGvvl~Elltg~~p~ 640 (710)
....++++|.+||+... ..|+..+|+||..+-.+|.+.++.++
T Consensus 488 ~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 488 DLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred chhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 01124566778888765 45777889999999888888776554
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.3e-25 Score=236.80 Aligned_cols=259 Identities=15% Similarity=0.114 Sum_probs=155.5
Q ss_pred EEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCc----hhccCCC-CCCEEEccCCCCCCCCCcccCCC-----CC
Q 005177 129 SLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVP----AEISQLE-HLKVLNLAGSYFSGPIPSQFGSF-----KS 198 (710)
Q Consensus 129 ~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p----~~~~~L~-~L~~L~L~~n~l~~~~p~~~~~l-----~~ 198 (710)
+++|+.|+++|.+|..+...++|++|||++|.+++..+ ..+.+++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 56889999999988888888889999999999987766 7788888 89999999999988777777664 88
Q ss_pred CCeEEecCCcCCCCCccccccc-----ccccccccccccccccCCccccCCCccchhccccccCCccCchhccC-CCCCc
Q 005177 199 LEFLHLAGNLLNDQIPAELGML-----KTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSN-LTKLE 272 (710)
Q Consensus 199 L~~L~L~~N~l~~~~p~~l~~l-----~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~-l~~L~ 272 (710)
|++|+|++|.+++..+..+... ++|+.|++++|.+++..+..+.. .+.. .++|+
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~--------------------~l~~~~~~L~ 141 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQ--------------------AFSNLPASIT 141 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH--------------------HHTTSCTTCC
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHH--------------------HHHhCCCcee
Confidence 9999999998887666544332 45555555555544333322211 1112 13555
Q ss_pred EEEccccccCCCCCc----cccCCC-CCCEEEccCCCCCCCCCcccc----CC-CCCCEEEcccccCccc----CCcccC
Q 005177 273 SLFLFRNQLAGQVPW----EFSRVT-TLKSLDLSDNRLSGPIPESFA----DL-KNLRLLSLMYNEMSGT----VPESLV 338 (710)
Q Consensus 273 ~L~L~~n~l~~~~p~----~~~~l~-~L~~L~Ls~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~g~----~p~~~~ 338 (710)
+|+|++|.+++..+. .+..++ +|++|+|++|++++..+..+. .+ ++|+.|+|++|.+++. ++..+.
T Consensus 142 ~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~ 221 (362)
T 3goz_A 142 SLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFS 221 (362)
T ss_dssp EEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHH
T ss_pred EEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHh
Confidence 555555555432221 122232 555555555555544443222 22 3555556655555542 233333
Q ss_pred C-CCCCcEEeccCCCCCCCCC----cccCCCCCCcEEECCCCcCCcc-------CcccccCCCceeeEecccCCcccchh
Q 005177 339 Q-LPSLEILFIWNNYFSGSLP----ENLGRNSKLRWVDVSTNNFNGS-------IPPDICSGGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 339 ~-l~~L~~L~L~~N~l~g~~p----~~l~~~~~L~~L~ls~N~l~g~-------ip~~~~~~~~L~~l~l~~N~l~g~i~ 406 (710)
. .++|++|+|++|.+++..+ ..+..+++|+.|++++|.+.+. ++..+..++.|+.|++++|.+....+
T Consensus 222 ~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 222 SIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred cCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 3 2356666666666654332 2234455666666666653322 23345556667777777777766644
Q ss_pred H
Q 005177 407 F 407 (710)
Q Consensus 407 ~ 407 (710)
.
T Consensus 302 ~ 302 (362)
T 3goz_A 302 I 302 (362)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.89 E-value=4.1e-25 Score=234.32 Aligned_cols=254 Identities=20% Similarity=0.239 Sum_probs=176.8
Q ss_pred CcEEECCCCcCcccCCccccCC--CCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcC-CchhccCCCCCCEEE
Q 005177 103 LVDLNLSHNSFSGQFPVEIFNL--TSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGS-VPAEISQLEHLKVLN 179 (710)
Q Consensus 103 L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~-~p~~~~~L~~L~~L~ 179 (710)
++.+|+++|.+. |..+..+ +++++|++++|.+.+..|. +..+++|++|+|++|.+++. +|..+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 567777777665 4445555 6777777777777766554 45677777777777776654 666677777777777
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCC-cCCCCCcccccccccccccccccccccccCCccccCCCccchhccccc-cC
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGN-LLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGA-NL 257 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n-~l 257 (710)
|++|.+++..|..++.+++|++|++++| .+++. .++..+.++++|++|++++| ++
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~-----------------------~l~~~~~~~~~L~~L~l~~~~~l 181 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEF-----------------------ALQTLLSSCSRLDELNLSWCFDF 181 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHH-----------------------HHHHHHHHCTTCCEEECCCCTTC
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHH-----------------------HHHHHHhcCCCCCEEcCCCCCCc
Confidence 7777766666666666777777777666 34321 13334556677777888887 77
Q ss_pred Ccc-CchhccCCC-CCcEEEcccc--ccC-CCCCccccCCCCCCEEEccCCC-CCCCCCccccCCCCCCEEEccccc-Cc
Q 005177 258 SGS-IPKELSNLT-KLESLFLFRN--QLA-GQVPWEFSRVTTLKSLDLSDNR-LSGPIPESFADLKNLRLLSLMYNE-MS 330 (710)
Q Consensus 258 ~g~-~p~~l~~l~-~L~~L~L~~n--~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~-l~ 330 (710)
++. ++..+..++ +|++|++++| .++ +.+|..+..+++|+.|++++|. +++..+..+..+++|+.|++++|. +.
T Consensus 182 ~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~ 261 (336)
T 2ast_B 182 TEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDII 261 (336)
T ss_dssp CHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCC
T ss_pred ChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCC
Confidence 654 566778888 9999999998 455 4556677788999999999998 777777888889999999999885 32
Q ss_pred ccCCcccCCCCCCcEEeccCCCCCCCCCcccCCC-CCCcEEECCCCcCCccCcccccC
Q 005177 331 GTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN-SKLRWVDVSTNNFNGSIPPDICS 387 (710)
Q Consensus 331 g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~-~~L~~L~ls~N~l~g~ip~~~~~ 387 (710)
......+..+++|++|++++| ++.. .+..+ ..+..|++++|++++..|+.++.
T Consensus 262 ~~~~~~l~~~~~L~~L~l~~~-i~~~---~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 262 PETLLELGEIPTLKTLQVFGI-VPDG---TLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp GGGGGGGGGCTTCCEEECTTS-SCTT---CHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred HHHHHHHhcCCCCCEEeccCc-cCHH---HHHHHHhhCcceEEecccCccccCCcccc
Confidence 222235778899999999988 3322 22222 23555668888898888877654
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.5e-23 Score=206.96 Aligned_cols=197 Identities=17% Similarity=0.199 Sum_probs=139.6
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCcEEECcCCC-CCCCCChhhcCCCCCCEEECCC-CCCCcCCchhccCCCCCCEE
Q 005177 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNN-FSGHFPGGIQSLRNLLVLDAFS-NSFSGSVPAEISQLEHLKVL 178 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~l~~L~~L~~L~L~~-N~l~~~~p~~~~~L~~L~~L 178 (710)
+.|++|+|++|++++..+..|.++++|++|+|++|+ +++..+..|.++++|++|++++ |.+++..+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 478999999999997777788999999999999997 8877777899999999999998 99997777889999999999
Q ss_pred EccCCCCCCCCCcccCCCCCCC---eEEecCC-cCCCCCccccccccccc-ccccccccccccCCccccCCCccchhccc
Q 005177 179 NLAGSYFSGPIPSQFGSFKSLE---FLHLAGN-LLNDQIPAELGMLKTVT-HMEIGYNFYQGNIPWQLGNMSEVQYLDIA 253 (710)
Q Consensus 179 ~L~~n~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~p~~l~~l~~L~-~L~l~~n~~~g~~p~~l~~l~~L~~L~ls 253 (710)
++++|.+++ +|. |..+++|+ +|++++| .+++..+..+..+++|+ .|++++|.++ .+|...
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~------------ 175 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYA------------ 175 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTT------------
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhh------------
Confidence 999999986 676 88888888 8999888 77655444455555555 5555555444 233222
Q ss_pred cccCCccCchhccCCCCCcEEEccccc-cCCCCCccccCC-CCCCEEEccCCCCCCCCCccccCCCCCCEEEcccc
Q 005177 254 GANLSGSIPKELSNLTKLESLFLFRNQ-LAGQVPWEFSRV-TTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYN 327 (710)
Q Consensus 254 ~n~l~g~~p~~l~~l~~L~~L~L~~n~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 327 (710)
+.. ++|+.|++++|. +++..+..|..+ ++|+.|++++|++++ +|.. .+++|+.|+++++
T Consensus 176 -----------~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 176 -----------FNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNT 236 (239)
T ss_dssp -----------TTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC
T ss_pred -----------cCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCc
Confidence 222 455555555553 554444455555 566666666666653 3322 4455666666544
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.6e-25 Score=253.34 Aligned_cols=324 Identities=13% Similarity=0.073 Sum_probs=207.4
Q ss_pred EEEEEcCCCC-Ccc-cCCcchhhhcCCCCcEEECCCCcCccc----CCccccCCCCCcEEECcCCCCCC----CCChhhc
Q 005177 77 VVGINLSMKG-LSG-ALPGKPLRIFFNELVDLNLSHNSFSGQ----FPVEIFNLTSLISLDISRNNFSG----HFPGGIQ 146 (710)
Q Consensus 77 v~~l~l~~~~-l~g-~~~~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~----~~p~~l~ 146 (710)
+..++++.+. +.. .++..... +++|++|+|++|.+++. ++..+.++++|++|+|++|.+++ .++..+.
T Consensus 140 L~~L~L~~~~~~~~~~l~~~~~~--~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~ 217 (592)
T 3ogk_B 140 LETLKLDKCSGFTTDGLLSIVTH--CRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIAR 217 (592)
T ss_dssp CCEEEEESCEEEEHHHHHHHHHH--CTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHH
T ss_pred CcEEECcCCCCcCHHHHHHHHhh--CCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHh
Confidence 6677776654 211 11111223 78999999999998765 44455688999999999999973 4455567
Q ss_pred CCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCC---CCCCcccCCCCCCCeEEecCCcCCCCCcccccccccc
Q 005177 147 SLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFS---GPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV 223 (710)
Q Consensus 147 ~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~---~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 223 (710)
++++|++|++++|.+.+ +|..+.++++|++|+++..... +..+..+..+++|+.|+++++. .+.+|..+..+++|
T Consensus 218 ~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L 295 (592)
T 3ogk_B 218 NCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILFPFAAQI 295 (592)
T ss_dssp HCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGGGGGGGC
T ss_pred hCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccc-hhHHHHHHhhcCCC
Confidence 89999999999999886 7888999999999999864332 3344566777888888887753 45677777778888
Q ss_pred cccccccccccccCC-ccccCCCccchhccccccCCccCchhccCCCCCcEEEccc-----------cccCCC-CCcccc
Q 005177 224 THMEIGYNFYQGNIP-WQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFR-----------NQLAGQ-VPWEFS 290 (710)
Q Consensus 224 ~~L~l~~n~~~g~~p-~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~-----------n~l~~~-~p~~~~ 290 (710)
++|++++|.+++... ..+.++++|+.|+++++-..+.++..+..+++|++|++++ |.+++. ++..+.
T Consensus 296 ~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~ 375 (592)
T 3ogk_B 296 RKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQ 375 (592)
T ss_dssp CEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHH
T ss_pred cEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHh
Confidence 888888877654433 3356777777777773322233444445567777777772 444432 112234
Q ss_pred CCCCCCEEEccCCCCCCCCCccccC-CCCCCEEEcc----cccCccc-----CCcccCCCCCCcEEeccCCC--CCCCCC
Q 005177 291 RVTTLKSLDLSDNRLSGPIPESFAD-LKNLRLLSLM----YNEMSGT-----VPESLVQLPSLEILFIWNNY--FSGSLP 358 (710)
Q Consensus 291 ~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls----~N~l~g~-----~p~~~~~l~~L~~L~L~~N~--l~g~~p 358 (710)
.+++|++|+++.|++++..+..++. +++|+.|+++ .|.+++. ++..+..+++|+.|++++|. +++..+
T Consensus 376 ~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~ 455 (592)
T 3ogk_B 376 GCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGL 455 (592)
T ss_dssp HCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHH
T ss_pred hCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHH
Confidence 4667777777667766655555554 6677777774 5555542 23334556667777765432 443333
Q ss_pred cccC-CCCCCcEEECCCCcCCc-cCcccccCCCceeeEecccCCcccc
Q 005177 359 ENLG-RNSKLRWVDVSTNNFNG-SIPPDICSGGVLFKLILFSNNFTGI 404 (710)
Q Consensus 359 ~~l~-~~~~L~~L~ls~N~l~g-~ip~~~~~~~~L~~l~l~~N~l~g~ 404 (710)
..+. .+++|+.|++++|.+++ .++..+..+++|++|++++|.+++.
T Consensus 456 ~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 503 (592)
T 3ogk_B 456 SYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSER 503 (592)
T ss_dssp HHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHH
T ss_pred HHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHH
Confidence 3332 25666677777666665 2344445556666777776666543
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.7e-22 Score=196.36 Aligned_cols=186 Identities=20% Similarity=0.208 Sum_probs=155.7
Q ss_pred CCceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCC
Q 005177 61 YACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGH 140 (710)
Q Consensus 61 ~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 140 (710)
..|.|.+|.|+... +. .+|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|++++.
T Consensus 5 C~C~~~~v~c~~~~------------l~-~~p~~~----~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 67 (208)
T 2o6s_A 5 CSCSGTTVECYSQG------------RT-SVPTGI----PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSL 67 (208)
T ss_dssp CEEETTEEECCSSC------------CS-SCCSCC----CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCC
T ss_pred CEECCCEEEecCCC------------cc-CCCCCC----CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCcc
Confidence 45899999998622 11 233332 45799999999999976666788999999999999999987
Q ss_pred CChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccccc
Q 005177 141 FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGML 220 (710)
Q Consensus 141 ~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 220 (710)
.+..|.++++|++|+|++|.+++..+..+.++++|++|+|++|++++..+..|.++++|++|++++|.+++..+..+..+
T Consensus 68 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 147 (208)
T 2o6s_A 68 PNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRL 147 (208)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC
T ss_pred ChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccC
Confidence 77778999999999999999997777778999999999999999998777778999999999999999997777678889
Q ss_pred ccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCC
Q 005177 221 KTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTK 270 (710)
Q Consensus 221 ~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~ 270 (710)
++|+.|++++|.+.+ .+++|++|+++.|+++|.+|..++.++.
T Consensus 148 ~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 148 TSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp TTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred CCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 999999999987764 3457888888888888888887776554
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.7e-22 Score=203.28 Aligned_cols=201 Identities=16% Similarity=0.221 Sum_probs=164.8
Q ss_pred CCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCC-CCcCCchhccCCCCCCEEEccC-CCCCCCCCcccCCCCCCCeE
Q 005177 125 TSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS-FSGSVPAEISQLEHLKVLNLAG-SYFSGPIPSQFGSFKSLEFL 202 (710)
Q Consensus 125 ~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~-l~~~~p~~~~~L~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L 202 (710)
++|++|+|++|++++..+..|.++++|++|++++|. +++..+..|.++++|++|+|++ |++++..+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 489999999999998888889999999999999997 8876667899999999999998 99997777889999999999
Q ss_pred EecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccc-cCCccCchhccCCCCCc-EEEccccc
Q 005177 203 HLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGA-NLSGSIPKELSNLTKLE-SLFLFRNQ 280 (710)
Q Consensus 203 ~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n-~l~g~~p~~l~~l~~L~-~L~L~~n~ 280 (710)
++++|.+++ +|. +..+++|+ .|++|++++| ++++..+..|..+++|+ .|++++|.
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~---------------------~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~ 167 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTD---------------------IFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNG 167 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCC---------------------SEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCC
T ss_pred eCCCCCCcc-ccc-cccccccc---------------------cccEEECCCCcchhhcCcccccchhcceeEEEcCCCC
Confidence 999998875 453 33332222 2337888888 77766667788899999 99999999
Q ss_pred cCCCCCccccCCCCCCEEEccCCC-CCCCCCccccCC-CCCCEEEcccccCcccCCcccCCCCCCcEEeccCCC
Q 005177 281 LAGQVPWEFSRVTTLKSLDLSDNR-LSGPIPESFADL-KNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNY 352 (710)
Q Consensus 281 l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~ 352 (710)
++...+..+.. ++|+.|++++|+ +++..+..|..+ ++|+.|++++|++++ +|.. .+++|+.|+++++.
T Consensus 168 l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 168 FTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNTW 237 (239)
T ss_dssp CCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC-
T ss_pred CcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCcc
Confidence 98433334444 899999999995 987777889999 999999999999985 5544 68899999998764
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.1e-24 Score=245.54 Aligned_cols=327 Identities=13% Similarity=0.058 Sum_probs=245.0
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCc-Ccc-cCCccccCCCCCcEEECcCCCCCCC----CChhhcCCC
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNS-FSG-QFPVEIFNLTSLISLDISRNNFSGH----FPGGIQSLR 149 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~L~ 149 (710)
.+..++++++.+++..+..+....-.+|++|+|++|. ++. .++....++++|++|+|++|.+++. ++..+.+++
T Consensus 113 ~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~ 192 (592)
T 3ogk_B 113 QLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNT 192 (592)
T ss_dssp TCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCC
T ss_pred CCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCC
Confidence 3677788877776655544444211349999999987 221 1233334789999999999998776 444567889
Q ss_pred CCCEEECCCCCCC----cCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCC---CCCccccccccc
Q 005177 150 NLLVLDAFSNSFS----GSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLN---DQIPAELGMLKT 222 (710)
Q Consensus 150 ~L~~L~L~~N~l~----~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~---~~~p~~l~~l~~ 222 (710)
+|++|++++|.++ +.++..+.++++|++|+|++|.+.+ +|..+.++++|+.|+++.+... +..+..+..+++
T Consensus 193 ~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~ 271 (592)
T 3ogk_B 193 SLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRK 271 (592)
T ss_dssp CCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTT
T ss_pred CccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhcccc
Confidence 9999999999997 3456667789999999999999886 7788899999999999864332 345567788889
Q ss_pred ccccccccccccccCCccccCCCccchhccccccCCccCc-hhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEcc
Q 005177 223 VTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP-KELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLS 301 (710)
Q Consensus 223 L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p-~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 301 (710)
|+.|+++++ ..+.+|..+..+++|++|++++|.+++... ..+..+++|+.|+++++...+.++..+..+++|++|+++
T Consensus 272 L~~L~l~~~-~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~ 350 (592)
T 3ogk_B 272 LCRLGLSYM-GPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIE 350 (592)
T ss_dssp CCEEEETTC-CTTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEE
T ss_pred ccccCcccc-chhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEee
Confidence 999988875 345677788889999999999999775444 346789999999999443333344445678899999999
Q ss_pred C-----------CCCCCC-CCccccCCCCCCEEEcccccCcccCCcccCC-CCCCcEEecc----CCCCCCC-----CCc
Q 005177 302 D-----------NRLSGP-IPESFADLKNLRLLSLMYNEMSGTVPESLVQ-LPSLEILFIW----NNYFSGS-----LPE 359 (710)
Q Consensus 302 ~-----------N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~-l~~L~~L~L~----~N~l~g~-----~p~ 359 (710)
+ |.+++. ++.....+++|+.|+++.|++++..+..+.. +++|+.|+++ .|.+++. ++.
T Consensus 351 ~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~ 430 (592)
T 3ogk_B 351 RGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRS 430 (592)
T ss_dssp CCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHH
T ss_pred cCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHH
Confidence 3 566543 2333456899999999999998877777765 8999999996 7778764 333
Q ss_pred ccCCCCCCcEEECCCC--cCCccCcccccC-CCceeeEecccCCcccc
Q 005177 360 NLGRNSKLRWVDVSTN--NFNGSIPPDICS-GGVLFKLILFSNNFTGI 404 (710)
Q Consensus 360 ~l~~~~~L~~L~ls~N--~l~g~ip~~~~~-~~~L~~l~l~~N~l~g~ 404 (710)
.+..+++|+.|+++.| .+++..+..+.. +++|+.|++++|++++.
T Consensus 431 ~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~ 478 (592)
T 3ogk_B 431 LLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDE 478 (592)
T ss_dssp HHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHH
T ss_pred HHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHH
Confidence 4667899999999754 377766666554 78899999999998863
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.87 E-value=8.5e-22 Score=206.14 Aligned_cols=192 Identities=24% Similarity=0.412 Sum_probs=83.9
Q ss_pred CCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeE
Q 005177 123 NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFL 202 (710)
Q Consensus 123 ~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 202 (710)
++++|++|++++|.++. +| .+..+++|++|+|++|.+++. |. +.++++|++|+|++|.+++ +| .+..+++|+.|
T Consensus 39 ~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L 112 (308)
T 1h6u_A 39 DLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTL 112 (308)
T ss_dssp HHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEE
T ss_pred HcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEE
Confidence 44455555555555443 23 344555555555555555432 22 5555555555555555543 22 34555555555
Q ss_pred EecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccC
Q 005177 203 HLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLA 282 (710)
Q Consensus 203 ~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~ 282 (710)
++++|.+++. |. +..+++|++|++++|.+++..+ ++.+++|++|++++|++++..+ +..+++|+.|++++|.++
T Consensus 113 ~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~ 186 (308)
T 1h6u_A 113 DLTSTQITDV-TP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKIS 186 (308)
T ss_dssp ECTTSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ECCCCCCCCc-hh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccC
Confidence 5555554431 11 2233333333333222221111 3334444444444444443211 444444555555554444
Q ss_pred CCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCc
Q 005177 283 GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS 330 (710)
Q Consensus 283 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 330 (710)
+..+ +..+++|++|++++|++++..| +..+++|+.|++++|.++
T Consensus 187 ~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 187 DISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp CCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEE
T ss_pred cChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeee
Confidence 3222 3444444444444444443321 444444444444444443
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2e-21 Score=197.14 Aligned_cols=107 Identities=20% Similarity=0.226 Sum_probs=75.1
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEcc
Q 005177 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (710)
Q Consensus 102 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~ 181 (710)
..++++++++.++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 3567777777776 5665544 567777777777777777677777777777777777777666667777777777777
Q ss_pred CCCCCCCCCcccCCCCCCCeEEecCCcCCC
Q 005177 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLND 211 (710)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 211 (710)
+|++++..+..|..+++|++|+|++|.+++
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 121 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKS 121 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCC
Confidence 777776666666666777777666666653
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-22 Score=228.89 Aligned_cols=200 Identities=24% Similarity=0.297 Sum_probs=133.5
Q ss_pred eeeee-eeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCC
Q 005177 64 SWSGV-KCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFP 142 (710)
Q Consensus 64 ~w~gv-~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 142 (710)
.|.|+ .|.. +.++.++++++++++ +|+.+ +++|++|+|++|.|+ .+| ..+++|++|+|++|+|++ +|
T Consensus 49 ~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l----~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip 116 (571)
T 3cvr_A 49 AVSLLKECLI--NQFSELQLNRLNLSS-LPDNL----PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LP 116 (571)
T ss_dssp HHHHHHHHHH--TTCSEEECCSSCCSC-CCSCC----CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CC
T ss_pred hhhhcccccc--CCccEEEeCCCCCCc-cCHhH----cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cc
Confidence 79999 6864 356677777777765 56544 356777777777776 556 346677777777777776 55
Q ss_pred hhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccccccc
Q 005177 143 GGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKT 222 (710)
Q Consensus 143 ~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 222 (710)
. +.+ +|++|+|++|.+++ +|. .+++|++|+|++|.+++ +|. .+++|++|+|++|.+++ +|. +.
T Consensus 117 ~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~---- 179 (571)
T 3cvr_A 117 E-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP---- 179 (571)
T ss_dssp C-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC----
T ss_pred h-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh----
Confidence 5 544 67777777777765 555 56677777777777765 554 45667777777766654 444 32
Q ss_pred ccccccccccccccCCccccCCCccchhccccccCCccCchhccC-----CCCCcEEEccccccCCCCCccccCCCCCCE
Q 005177 223 VTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSN-----LTKLESLFLFRNQLAGQVPWEFSRVTTLKS 297 (710)
Q Consensus 223 L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~-----l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 297 (710)
++|+.|++++|+++ .+|. +.. .+.|+.|+|++|+++ .+|..+..+++|+.
T Consensus 180 ----------------------~~L~~L~Ls~N~L~-~lp~-~~~~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~ 234 (571)
T 3cvr_A 180 ----------------------ESLEALDVSTNLLE-SLPA-VPVRNHHSEETEIFFRCRENRIT-HIPENILSLDPTCT 234 (571)
T ss_dssp ----------------------TTCCEEECCSSCCS-SCCC-CC--------CCEEEECCSSCCC-CCCGGGGGSCTTEE
T ss_pred ----------------------CCCCEEECcCCCCC-chhh-HHHhhhcccccceEEecCCCcce-ecCHHHhcCCCCCE
Confidence 45555555555555 3444 332 122388888888887 47777777889999
Q ss_pred EEccCCCCCCCCCccccCCC
Q 005177 298 LDLSDNRLSGPIPESFADLK 317 (710)
Q Consensus 298 L~Ls~N~l~~~~p~~~~~l~ 317 (710)
|+|++|.+++.+|..+..++
T Consensus 235 L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 235 IILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp EECCSSSCCHHHHHHHHHHH
T ss_pred EEeeCCcCCCcCHHHHHHhh
Confidence 99999999888888777654
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-21 Score=205.10 Aligned_cols=192 Identities=21% Similarity=0.374 Sum_probs=165.9
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
+++|++|++++|.+.. +| .+..+++|++|+|++|.+++..+ +..+++|++|+|++|.+++ +| .+..+++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~ 113 (308)
T 1h6u_A 40 LDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLD 113 (308)
T ss_dssp HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEE
T ss_pred cCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEE
Confidence 6789999999999874 55 68899999999999999986544 8999999999999999986 34 689999999999
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCc
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g 259 (710)
|++|++++ +|. +..+++|+.|++++|.+++..+ ++.+++|+.|++++|.+++..+ +..+++|+.|++++|++++
T Consensus 114 l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 187 (308)
T 1h6u_A 114 LTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISD 187 (308)
T ss_dssp CTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCc
Confidence 99999986 443 8999999999999999986544 8889999999999999886433 8899999999999999986
Q ss_pred cCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCC
Q 005177 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG 307 (710)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 307 (710)
..+ +..+++|+.|++++|++++..| +..+++|+.|++++|.+++
T Consensus 188 ~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 188 ISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred Chh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 544 8889999999999999987653 7889999999999999975
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.85 E-value=3e-21 Score=217.06 Aligned_cols=188 Identities=25% Similarity=0.362 Sum_probs=140.5
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEcc
Q 005177 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (710)
Q Consensus 102 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~ 181 (710)
+|+.|+|++|.+++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|.+++ +|. +.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 67777777777765 666553 67777777777777 455 446777777777777775 565 544 67777777
Q ss_pred CCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccC
Q 005177 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261 (710)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~ 261 (710)
+|++++ +|. .+++|+.|+|++|.+++ + |. .+++|++|++++|++++ +
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l------------------------p~---~l~~L~~L~Ls~N~L~~-l 175 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-L------------------------PE---LPTSLEVLSVRNNQLTF-L 175 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-C------------------------CC---CCTTCCEEECCSSCCSC-C
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-C------------------------CC---cCCCcCEEECCCCCCCC-c
Confidence 777765 555 46667777777766653 3 32 34678888899999886 6
Q ss_pred chhccCCCCCcEEEccccccCCCCCccccCCCCC-------CEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCC
Q 005177 262 PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTL-------KSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVP 334 (710)
Q Consensus 262 p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p 334 (710)
|. +. ++|+.|+|++|+++ .+|. +.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|.+++.+|
T Consensus 176 p~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p 247 (571)
T 3cvr_A 176 PE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIR 247 (571)
T ss_dssp CC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHH
T ss_pred ch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCH
Confidence 66 65 89999999999999 6666 554 77 99999999999 588888889999999999999999999
Q ss_pred cccCCCC
Q 005177 335 ESLVQLP 341 (710)
Q Consensus 335 ~~~~~l~ 341 (710)
..+..++
T Consensus 248 ~~l~~l~ 254 (571)
T 3cvr_A 248 ESLSQQT 254 (571)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 8887654
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.85 E-value=5.5e-21 Score=203.82 Aligned_cols=202 Identities=13% Similarity=0.082 Sum_probs=129.0
Q ss_pred ceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCC
Q 005177 63 CSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFP 142 (710)
Q Consensus 63 C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 142 (710)
|+|..|.|+. ++++ .+|..+ .+++++|+|++|+|+...+..|.++++|++|+|++|++.+.+|
T Consensus 9 C~~~~v~C~~------------~~Lt-~iP~~l----~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~ 71 (350)
T 4ay9_X 9 CSNRVFLCQE------------SKVT-EIPSDL----PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIE 71 (350)
T ss_dssp EETTEEEEES------------TTCC-SCCTTC----CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEEC
T ss_pred eeCCEEEecC------------CCCC-ccCcCc----CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccC
Confidence 7777777864 2222 344443 3578999999999985555578999999999999999877666
Q ss_pred h-hhcCCCCCCE-EECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecC-CcCCCCCcccccc
Q 005177 143 G-GIQSLRNLLV-LDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAG-NLLNDQIPAELGM 219 (710)
Q Consensus 143 ~-~l~~L~~L~~-L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~l~~ 219 (710)
. .|.++++|+. ++++.|+++...|..|.++++|++|++++|++++..+..+....++..|++.+ |.+....+..+..
T Consensus 72 ~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~ 151 (350)
T 4ay9_X 72 ADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVG 151 (350)
T ss_dssp TTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTT
T ss_pred hhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhh
Confidence 4 5788888765 66778999987788899999999999999999877777777777888888865 4444333333333
Q ss_pred cc-cccccccccccccccCCccccCCCccchhccccccCCccCc-hhccCCCCCcEEEccccccC
Q 005177 220 LK-TVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP-KELSNLTKLESLFLFRNQLA 282 (710)
Q Consensus 220 l~-~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p-~~l~~l~~L~~L~L~~n~l~ 282 (710)
+. .++.|++++|.++ .+|......++|+.|++++++..+.+| ..|..+++|+.|++++|+++
T Consensus 152 ~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~ 215 (350)
T 4ay9_X 152 LSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH 215 (350)
T ss_dssp SBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC
T ss_pred cchhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC
Confidence 32 3444555555444 233333333444444444322222222 22344444444444444444
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.85 E-value=7.3e-21 Score=202.84 Aligned_cols=241 Identities=16% Similarity=0.156 Sum_probs=159.1
Q ss_pred cEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCc-hhccCCCCCCE-EEcc
Q 005177 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVP-AEISQLEHLKV-LNLA 181 (710)
Q Consensus 104 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p-~~~~~L~~L~~-L~L~ 181 (710)
++++.++|+++ .+|..+ .+++++|+|++|+|+...++.|.++++|++|+|++|++.+.+| ..|.++++|+. +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 45677888887 678766 3689999999999987666778999999999999999877665 46788888775 6677
Q ss_pred CCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccC
Q 005177 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261 (710)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~ 261 (710)
.|+++...|..|.++++|++|++++|.+....+..+....++..+++..+ +++....
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~-----------------------~~i~~l~ 145 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDN-----------------------INIHTIE 145 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESC-----------------------TTCCEEC
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccc-----------------------ccccccc
Confidence 78998877888999999999999999887655544444444444444322 2333222
Q ss_pred chhccCC-CCCcEEEccccccCCCCCccccCCCCCCEEEccC-CCCCCCCCccccCCCCCCEEEcccccCcccCCcccCC
Q 005177 262 PKELSNL-TKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSD-NRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (710)
Q Consensus 262 p~~l~~l-~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 339 (710)
+..|..+ ..++.|++++|+++. +|.......+|+.|++++ |.++...+..|..+++|+.|+|++|+++. +|.. .
T Consensus 146 ~~~f~~~~~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~-lp~~--~ 221 (350)
T 4ay9_X 146 RNSFVGLSFESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHS-LPSY--G 221 (350)
T ss_dssp TTSSTTSBSSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCC-CCSS--S
T ss_pred ccchhhcchhhhhhccccccccC-CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCc-cChh--h
Confidence 3334433 346667777777764 333333445677777764 44443333456777777777777777774 3332 2
Q ss_pred CCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCC
Q 005177 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTN 375 (710)
Q Consensus 340 l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N 375 (710)
+.+|+.|.+.++.--..+| .+.++++|+.++++++
T Consensus 222 ~~~L~~L~~l~~~~l~~lP-~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 222 LENLKKLRARSTYNLKKLP-TLEKLVALMEASLTYP 256 (350)
T ss_dssp CTTCCEEECTTCTTCCCCC-CTTTCCSCCEEECSCH
T ss_pred hccchHhhhccCCCcCcCC-CchhCcChhhCcCCCC
Confidence 3455555544443334566 3667777888777654
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.85 E-value=7.8e-21 Score=186.84 Aligned_cols=181 Identities=18% Similarity=0.189 Sum_probs=127.4
Q ss_pred cEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCC
Q 005177 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 183 (710)
Q Consensus 104 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n 183 (710)
+.++++++.++ .+|..+ .++|++|+|++|++++..+..|.++++|++|++++|++++..+..|.++++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 46777888876 456544 468999999999999877777889999999999999998766667888999999999999
Q ss_pred CCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCch
Q 005177 184 YFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPK 263 (710)
Q Consensus 184 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~ 263 (710)
++++..+..|.++++|++|++++|.+++..+..+..+++|++| ++++|++++..+.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L------------------------~l~~N~l~~~~~~ 142 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDL------------------------RLYQNQLKSVPDG 142 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE------------------------ECCSSCCSCCCTT
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEE------------------------ECCCCccceeCHH
Confidence 9987767778889999999999988876555445555555554 4555555444444
Q ss_pred hccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCC
Q 005177 264 ELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKN 318 (710)
Q Consensus 264 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 318 (710)
.+..+++|+.|++++|.+.+ .+++|++|+++.|+++|.+|.+++.++.
T Consensus 143 ~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 143 VFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp TTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred HhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 45555555556655555443 2334555666666666666665555443
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=5.7e-22 Score=204.34 Aligned_cols=130 Identities=13% Similarity=0.098 Sum_probs=108.6
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccch-------------------hHHHHHHHHHHHhccCCCCceeEEEEE
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT-------------------RIKIVSEFITRIGTVRHKNLIRLLGFC 510 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~-------------------~~~~~~~e~~~l~~l~H~niv~l~g~~ 510 (710)
..+.||+|+||.||+|...+|+.||||.++.+.. ....+.+|++++++++ | +++.+++
T Consensus 94 ~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~ 170 (282)
T 1zar_A 94 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVY 170 (282)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEE
T ss_pred ecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEE
Confidence 4588999999999999988899999999975321 3456889999999998 4 6666655
Q ss_pred EcCCceeEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccc
Q 005177 511 YNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 590 (710)
Q Consensus 511 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~ 590 (710)
.. +..++||||+++|+|.+ +.. .....++.|+++||+|||+. +|+||||||+|||++ ++.+||+|||+++
T Consensus 171 ~~-~~~~lvmE~~~g~~L~~-l~~----~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vkl~DFG~a~ 240 (282)
T 1zar_A 171 AW-EGNAVLMELIDAKELYR-VRV----ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIWIIDFPQSV 240 (282)
T ss_dssp EE-ETTEEEEECCCCEEGGG-CCC----SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEEECCCTTCE
T ss_pred ec-cceEEEEEecCCCcHHH-cch----hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEEEEECCCCe
Confidence 43 56799999999999998 532 23457999999999999998 999999999999999 9999999999987
Q ss_pred cc
Q 005177 591 LT 592 (710)
Q Consensus 591 ~~ 592 (710)
..
T Consensus 241 ~~ 242 (282)
T 1zar_A 241 EV 242 (282)
T ss_dssp ET
T ss_pred EC
Confidence 54
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.84 E-value=8.9e-22 Score=229.25 Aligned_cols=266 Identities=19% Similarity=0.191 Sum_probs=129.2
Q ss_pred ChhhHHHHHHHHhhCCCC-CCCCCCCCCCCCCCCCCCCCCceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCC
Q 005177 24 NDPYSEALLSLKSELVDD-FNSLHDWFVPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNE 102 (710)
Q Consensus 24 ~~~~~~all~~k~~~~~~-~~~l~~w~~~~~~~~~~~~~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~ 102 (710)
...++++|+++..+...+ ...-..|..+ .+..+.|.++.++. .+++.+++..+++... +.. .
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~~-~~~-------~ 192 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGD-------STPSGTATNSAVST--PLTPKIELFANGKDEA-NQA-------L 192 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCC-------CCccccCCCceecC--CccceEEeeCCCCCcc-hhh-------H
Confidence 345789999999887322 1233455432 34567899988875 6788889888877653 222 2
Q ss_pred CcEEECCCCcCcc---------cCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCC
Q 005177 103 LVDLNLSHNSFSG---------QFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLE 173 (710)
Q Consensus 103 L~~L~Ls~N~l~~---------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~ 173 (710)
|+.++|++|.+.+ ..|..+..+++|++|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|..|++|+
T Consensus 193 l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 270 (727)
T 4b8c_D 193 LQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLS 270 (727)
T ss_dssp -----------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGT
T ss_pred hhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCC
Confidence 3444455544433 34667888899999999999987 67777888999999999999998 7888899999
Q ss_pred CCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCc-cchhcc
Q 005177 174 HLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSE-VQYLDI 252 (710)
Q Consensus 174 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~-L~~L~l 252 (710)
+|++|+|++|.|+ .+|..|++|++|++|+|++|.++ .+|..++.+++|+.|+|++|.+++.+|..+..+.. +..+++
T Consensus 271 ~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l 348 (727)
T 4b8c_D 271 NLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYL 348 (727)
T ss_dssp TCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhh
Confidence 9999999999998 77888999999999999999886 67888888888888888888888877776654432 234677
Q ss_pred ccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCccc
Q 005177 253 AGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGT 332 (710)
Q Consensus 253 s~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 332 (710)
++|.++|.+|.. |..|+++.|.. .-.. .+.+.+..+..+.++..+....+++|.+.+.
T Consensus 349 ~~N~l~~~~p~~------l~~l~l~~n~~---~~~~-------------~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~~ 406 (727)
T 4b8c_D 349 RDNRPEIPLPHE------RRFIEINTDGE---PQRE-------------YDSLQQSTEHLATDLAKRTFTVLSYNTLCQH 406 (727)
T ss_dssp HHCCCCCCCCCC---------------------------------------------------------------CCCGG
T ss_pred ccCcccCcCccc------cceeEeecccc---cccc-------------cCCccccccchhhcccccceeeeeccccccc
Confidence 777777777653 44455554410 0000 1123333344455566666677777766543
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.6e-19 Score=180.31 Aligned_cols=161 Identities=23% Similarity=0.241 Sum_probs=135.9
Q ss_pred CCCCceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCC
Q 005177 59 KIYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFS 138 (710)
Q Consensus 59 ~~~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 138 (710)
....|+|.+|.|+... + +.+|..+ .++|++|+|++|.+++..|..|.++++|++|+|++|+++
T Consensus 15 ~~~~Cs~~~v~c~~~~------------l-~~ip~~~----~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~ 77 (229)
T 3e6j_A 15 SQCSCSGTTVDCRSKR------------H-ASVPAGI----PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG 77 (229)
T ss_dssp TTCEEETTEEECTTSC------------C-SSCCSCC----CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCEEeCCEeEccCCC------------c-CccCCCC----CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCC
Confidence 4578999999998522 1 2344433 368999999999999988989999999999999999998
Q ss_pred CCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccc
Q 005177 139 GHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG 218 (710)
Q Consensus 139 ~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 218 (710)
+..+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|+++ .+|..+..+++|++|+|++|++++..+..+.
T Consensus 78 ~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 156 (229)
T 3e6j_A 78 ALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFD 156 (229)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTT
T ss_pred CcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHh
Confidence 777777899999999999999999877777899999999999999998 7888999999999999999999876666777
Q ss_pred ccccccccccccccccccC
Q 005177 219 MLKTVTHMEIGYNFYQGNI 237 (710)
Q Consensus 219 ~l~~L~~L~l~~n~~~g~~ 237 (710)
.+++|+.|++++|.+....
T Consensus 157 ~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 157 RLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp TCTTCCEEECTTSCBCTTB
T ss_pred CCCCCCEEEeeCCCccCCc
Confidence 8888888888888776543
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-22 Score=231.86 Aligned_cols=322 Identities=16% Similarity=0.106 Sum_probs=162.4
Q ss_pred cEEEEEcCCCCCcccCCcchh-hhcCCCCcEEECCCC-cCccc-CCccccCCCCCcEEECcCCCCCCCCChhhc----CC
Q 005177 76 IVVGINLSMKGLSGALPGKPL-RIFFNELVDLNLSHN-SFSGQ-FPVEIFNLTSLISLDISRNNFSGHFPGGIQ----SL 148 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~-~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~----~L 148 (710)
.+..++++++.+++..+..+. . +++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .+
T Consensus 106 ~L~~L~L~~~~~~~~~~~~l~~~--~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 106 WLEEIRLKRMVVTDDCLELIAKS--FKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp TCCEEEEESCBCCHHHHHHHHHH--CTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCeEEeeCcEEcHHHHHHHHHh--CCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 466777777776665444443 3 677888888877 44432 333344778888888888877665544443 55
Q ss_pred CCCCEEECCCCC--CCc-CCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCc-----------------
Q 005177 149 RNLLVLDAFSNS--FSG-SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNL----------------- 208 (710)
Q Consensus 149 ~~L~~L~L~~N~--l~~-~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~----------------- 208 (710)
++|++|++++|. ++. .++..+.++++|++|+|++|...+.+|..+.++++|+.|+++.+.
T Consensus 184 ~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~ 263 (594)
T 2p1m_B 184 TSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSG 263 (594)
T ss_dssp CCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHT
T ss_pred CcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhc
Confidence 678888887776 221 122223456777888877763222244445555555555543321
Q ss_pred ---------CC----CCCcccccccccccccccccccccccCC-ccccCCCccchhccccccCCc-cCchhccCCCCCcE
Q 005177 209 ---------LN----DQIPAELGMLKTVTHMEIGYNFYQGNIP-WQLGNMSEVQYLDIAGANLSG-SIPKELSNLTKLES 273 (710)
Q Consensus 209 ---------l~----~~~p~~l~~l~~L~~L~l~~n~~~g~~p-~~l~~l~~L~~L~ls~n~l~g-~~p~~l~~l~~L~~ 273 (710)
+. +.+|..+..+++|++|++++|.+++... ..+.++++|+.|++++| ++. .++.....+++|+.
T Consensus 264 ~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~ 342 (594)
T 2p1m_B 264 CKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRE 342 (594)
T ss_dssp CTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCE
T ss_pred CCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCE
Confidence 11 1223333356677777777776553322 22446667777777666 321 12222233566666
Q ss_pred EEccc---------cccCCCCCccc-cCCCCCCEEEccCCCCCCCCCcccc-CCCCCCEEEcc--c----ccCcc-----
Q 005177 274 LFLFR---------NQLAGQVPWEF-SRVTTLKSLDLSDNRLSGPIPESFA-DLKNLRLLSLM--Y----NEMSG----- 331 (710)
Q Consensus 274 L~L~~---------n~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~g----- 331 (710)
|++++ +.+++.....+ ..+++|+.|+++.|.+++..+..+. .+++|+.|+++ + |.+++
T Consensus 343 L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~ 422 (594)
T 2p1m_B 343 LRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDI 422 (594)
T ss_dssp EEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHH
T ss_pred EEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhh
Confidence 66632 22322111111 1245555555555555544333333 35555555555 2 33331
Q ss_pred cCCcccCCCCCCcEEeccCCCCCCCCCcccCC-CCCCcEEECCCCcCCccCcccc-cCCCceeeEecccCCc
Q 005177 332 TVPESLVQLPSLEILFIWNNYFSGSLPENLGR-NSKLRWVDVSTNNFNGSIPPDI-CSGGVLFKLILFSNNF 401 (710)
Q Consensus 332 ~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~-~~~L~~L~ls~N~l~g~ip~~~-~~~~~L~~l~l~~N~l 401 (710)
.++..+..+++|+.|++++ .+++..+..+.. +++|+.|++++|.+++..+..+ ..+++|++|++++|.+
T Consensus 423 ~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 423 GFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp HHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred HHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCC
Confidence 1111233445555555544 333322222322 4445555555555544333332 3344555555555555
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=4e-19 Score=176.24 Aligned_cols=153 Identities=19% Similarity=0.206 Sum_probs=132.0
Q ss_pred EcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCc-cccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCC
Q 005177 81 NLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPV-EIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159 (710)
Q Consensus 81 ~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N 159 (710)
+++++.+. .+|..+ ...+++|+|++|.+++..|. .|.++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 17 ~~s~n~l~-~iP~~~----~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 17 DCSNQKLN-KIPEHI----PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp ECCSSCCS-SCCSCC----CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeCCCCcc-cCccCC----CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 33344444 355554 34678999999999987654 5789999999999999999988889999999999999999
Q ss_pred CCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCC
Q 005177 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIP 238 (710)
Q Consensus 160 ~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p 238 (710)
.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..+..+++|+.|++++|.+.+..+
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 9998888889999999999999999999889999999999999999999998889899989999999988888876543
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.79 E-value=2.3e-19 Score=203.96 Aligned_cols=192 Identities=28% Similarity=0.355 Sum_probs=138.7
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEc
Q 005177 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L 180 (710)
..+..++|+.+.+....+ +..+++|+.|+|++|.+.. +| .+..+++|+.|+|++|.+++..| +..+++|++|+|
T Consensus 21 ~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~L 94 (605)
T 1m9s_A 21 AETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFL 94 (605)
T ss_dssp HHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEEC
T ss_pred HHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEEC
Confidence 346667788888775544 5678899999999999875 34 58899999999999999987554 889999999999
Q ss_pred cCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCcc
Q 005177 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS 260 (710)
Q Consensus 181 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~ 260 (710)
++|.+++ +| .+..+++|+.|+|++|.+++. +.+. .+++|+.|+|++|++++.
T Consensus 95 s~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~------------------------~l~~L~~L~Ls~N~l~~l 146 (605)
T 1m9s_A 95 DENKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLV------------------------HLPQLESLYLGNNKITDI 146 (605)
T ss_dssp CSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGG------------------------GCTTCSEEECCSSCCCCC
T ss_pred cCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC--cccc------------------------CCCccCEEECCCCccCCc
Confidence 9999985 34 688889999999999888752 2233 445555555555555543
Q ss_pred CchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCccc
Q 005177 261 IPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGT 332 (710)
Q Consensus 261 ~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 332 (710)
..+..+++|+.|+|++|.+++..| +..+++|+.|+|++|++++. ..+..+++|+.|+|++|++++.
T Consensus 147 --~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 147 --TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp --GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred --hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 346666677777777777766544 66677777777777777653 3466777777777777777653
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.79 E-value=2.7e-19 Score=203.28 Aligned_cols=185 Identities=23% Similarity=0.335 Sum_probs=133.0
Q ss_pred EcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCC
Q 005177 81 NLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS 160 (710)
Q Consensus 81 ~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~ 160 (710)
++....+.+.++ ... ++.|+.|+|++|.+.. +| .+..+++|+.|+|++|.+++..| +..+++|+.|+|++|.
T Consensus 27 ~l~~~~i~~~~~--~~~--L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~ 98 (605)
T 1m9s_A 27 NLKKKSVTDAVT--QNE--LNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENK 98 (605)
T ss_dssp HTTCSCTTSEEC--HHH--HTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSC
T ss_pred hccCCCcccccc--hhc--CCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCC
Confidence 444444544333 333 7899999999999974 44 68999999999999999998655 9999999999999999
Q ss_pred CCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCcc
Q 005177 161 FSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQ 240 (710)
Q Consensus 161 l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~ 240 (710)
+++ +| .+..+++|++|+|++|.+++ + +.+..+++|+.|+|++|.+++. ..+..+++|+.|+|
T Consensus 99 l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~L------------ 160 (605)
T 1m9s_A 99 IKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSL------------ 160 (605)
T ss_dssp CCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEEC------------
T ss_pred CCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEEC------------
Confidence 986 34 79999999999999999986 3 4689999999999999998764 34445555555554
Q ss_pred ccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCC
Q 005177 241 LGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG 307 (710)
Q Consensus 241 l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 307 (710)
++|.+++..| +..+++|+.|+|++|++++. ..+..+++|+.|+|++|++.+
T Consensus 161 ------------s~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 161 ------------EDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp ------------CSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred ------------cCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 4444444333 44555555555555555442 234555555555555555544
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-18 Score=173.08 Aligned_cols=158 Identities=23% Similarity=0.311 Sum_probs=134.4
Q ss_pred CCceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCC
Q 005177 61 YACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGH 140 (710)
Q Consensus 61 ~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 140 (710)
..|.|..+.|.. +++. .+|..+ .+.|+.|+|++|.+++..|..|..+++|++|+|++|++++.
T Consensus 9 C~C~~~~v~c~~------------~~l~-~iP~~l----~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~ 71 (220)
T 2v9t_B 9 CTCSNNIVDCRG------------KGLT-EIPTNL----PETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISEL 71 (220)
T ss_dssp SEEETTEEECTT------------SCCS-SCCSSC----CTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEE
T ss_pred CEECCCEEEcCC------------CCcC-cCCCcc----CcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCc
Confidence 347787777764 2222 244433 35799999999999987777899999999999999999999
Q ss_pred CChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccccc
Q 005177 141 FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGML 220 (710)
Q Consensus 141 ~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 220 (710)
.|..|.++++|++|+|++|.++...+..|.++++|++|+|++|++++..|..|.++++|++|+|++|.+++..+..+..+
T Consensus 72 ~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 151 (220)
T 2v9t_B 72 APDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 151 (220)
T ss_dssp CTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC
T ss_pred CHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCC
Confidence 89999999999999999999997666668999999999999999999889999999999999999999998777778888
Q ss_pred ccccccccccccccc
Q 005177 221 KTVTHMEIGYNFYQG 235 (710)
Q Consensus 221 ~~L~~L~l~~n~~~g 235 (710)
++|+.|++++|.+..
T Consensus 152 ~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 152 RAIQTMHLAQNPFIC 166 (220)
T ss_dssp TTCCEEECCSSCEEC
T ss_pred CCCCEEEeCCCCcCC
Confidence 888888888887653
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=99.79 E-value=8.8e-22 Score=225.25 Aligned_cols=305 Identities=15% Similarity=0.126 Sum_probs=218.1
Q ss_pred CCCCcEEECCCCcCcccCCcccc-CCCCCcEEECcCC-CCCCC-CChhhcCCCCCCEEECCCCCCCcCCchhcc----CC
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRN-NFSGH-FPGGIQSLRNLLVLDAFSNSFSGSVPAEIS----QL 172 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N-~l~~~-~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~----~L 172 (710)
+++|++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .+
T Consensus 104 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 104 YTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 78899999999998877777776 6899999999998 45432 444556899999999999998765544443 67
Q ss_pred CCCCEEEccCCC--CCC-CCCcccCCCCCCCeEEecCCcCCCCCccccccccccccccccccc-----------------
Q 005177 173 EHLKVLNLAGSY--FSG-PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNF----------------- 232 (710)
Q Consensus 173 ~~L~~L~L~~n~--l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~----------------- 232 (710)
++|++|++++|. ++. .++..+.++++|+.|++++|...+.+|..+..+++|+.|+++.+.
T Consensus 184 ~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~ 263 (594)
T 2p1m_B 184 TSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSG 263 (594)
T ss_dssp CCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHT
T ss_pred CcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhc
Confidence 799999999887 211 111123456899999999884333477777778888888754431
Q ss_pred ---------c----cccCCccccCCCccchhccccccCCccCc-hhccCCCCCcEEEccccccCC-CCCccccCCCCCCE
Q 005177 233 ---------Y----QGNIPWQLGNMSEVQYLDIAGANLSGSIP-KELSNLTKLESLFLFRNQLAG-QVPWEFSRVTTLKS 297 (710)
Q Consensus 233 ---------~----~g~~p~~l~~l~~L~~L~ls~n~l~g~~p-~~l~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~ 297 (710)
+ .+.+|..+..+++|+.|++++|.+++... ..+..+++|+.|++++| ++. .++.....+++|+.
T Consensus 264 ~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~ 342 (594)
T 2p1m_B 264 CKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRE 342 (594)
T ss_dssp CTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCE
T ss_pred CCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCE
Confidence 1 11233334467899999999999775433 33568999999999988 432 22333346899999
Q ss_pred EEccC---------CCCCCCCCcccc-CCCCCCEEEcccccCcccCCcccC-CCCCCcEEecc--C----CCCCCCC---
Q 005177 298 LDLSD---------NRLSGPIPESFA-DLKNLRLLSLMYNEMSGTVPESLV-QLPSLEILFIW--N----NYFSGSL--- 357 (710)
Q Consensus 298 L~Ls~---------N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~L~--~----N~l~g~~--- 357 (710)
|+++. +.+++.....+. .+++|+.|.++.|.+++..+..+. .+++|+.|+++ + |.+++..
T Consensus 343 L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~ 422 (594)
T 2p1m_B 343 LRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDI 422 (594)
T ss_dssp EEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHH
T ss_pred EEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhh
Confidence 99943 455443223333 489999999999999876666665 58999999999 4 5555321
Q ss_pred --CcccCCCCCCcEEECCCCcCCccCcccccC-CCceeeEecccCCcccchh
Q 005177 358 --PENLGRNSKLRWVDVSTNNFNGSIPPDICS-GGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 358 --p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~-~~~L~~l~l~~N~l~g~i~ 406 (710)
+..+..+++|+.|++++ .+++..+..++. +++|+.|++++|.+++..+
T Consensus 423 ~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~ 473 (594)
T 2p1m_B 423 GFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGM 473 (594)
T ss_dssp HHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHH
T ss_pred HHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHH
Confidence 11256778999999977 777776666665 7899999999999977543
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.78 E-value=8.3e-19 Score=173.92 Aligned_cols=155 Identities=17% Similarity=0.206 Sum_probs=117.2
Q ss_pred cEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCC-hhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccC
Q 005177 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFP-GGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182 (710)
Q Consensus 104 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~ 182 (710)
+.+++++|.++ .+|..+. ..+++|+|++|++++..| ..|..+++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 47999999987 5776654 456899999999998755 4578899999999999999987777899999999999999
Q ss_pred CCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCc
Q 005177 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP 262 (710)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p 262 (710)
|++++..|..|.++++|++|+|++|.+++..|..+..+++ |++|++++|++++..|
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~------------------------L~~L~L~~N~l~~~~~ 146 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSS------------------------VRLLSLYDNQITTVAP 146 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTT------------------------CSEEECTTSCCCCBCT
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCcc------------------------CCEEECCCCcCCEECH
Confidence 9998877778888999999999998888766665555554 4555555555555555
Q ss_pred hhccCCCCCcEEEccccccCCCC
Q 005177 263 KELSNLTKLESLFLFRNQLAGQV 285 (710)
Q Consensus 263 ~~l~~l~~L~~L~L~~n~l~~~~ 285 (710)
..+..+++|+.|++++|.+++..
T Consensus 147 ~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 147 GAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp TTTTTCTTCCEEECCSCCEECSG
T ss_pred HHhcCCCCCCEEEecCcCCcCCC
Confidence 55555666666666666655433
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.78 E-value=5.4e-19 Score=183.18 Aligned_cols=170 Identities=22% Similarity=0.336 Sum_probs=101.5
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
+++|+.|++++|.+.. +| .+..+++|++|+|++|++++..| +.++++|++|+|++|.+++ +| .+..+++|++|+
T Consensus 45 l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~ 118 (291)
T 1h6t_A 45 LNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLS 118 (291)
T ss_dssp HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEE
T ss_pred cCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEE
Confidence 5567777777776653 23 36666777777777777765433 6667777777777777664 22 366677777777
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCc
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g 259 (710)
|++|++++. +.+..+++|+.|++++|.+++. ..+ +.+++|+.|++++|++++
T Consensus 119 L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l------------------------~~l~~L~~L~L~~N~l~~ 170 (291)
T 1h6t_A 119 LEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVL------------------------SRLTKLDTLSLEDNQISD 170 (291)
T ss_dssp CTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGG------------------------GGCTTCSEEECCSSCCCC
T ss_pred CCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhh------------------------ccCCCCCEEEccCCcccc
Confidence 777766642 3466666666666666666543 334 444555555555555554
Q ss_pred cCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCC
Q 005177 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG 307 (710)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 307 (710)
..| +..+++|+.|++++|.+++ +| .+..+++|+.|++++|+++.
T Consensus 171 ~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 171 IVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred chh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 333 5555566666666665554 22 25555666666666665553
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-18 Score=172.81 Aligned_cols=152 Identities=19% Similarity=0.265 Sum_probs=118.4
Q ss_pred cEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCC
Q 005177 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 183 (710)
Q Consensus 104 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n 183 (710)
+.+++++|.++ .+|..+. ++|+.|+|++|++++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 46788899887 5776654 78999999999999888888999999999999999999888999999999999999999
Q ss_pred CCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCch
Q 005177 184 YFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPK 263 (710)
Q Consensus 184 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~ 263 (710)
+++...+..|.++++|++|+|++|.+++..|..+..+++ |++|++++|++++..+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~------------------------L~~L~L~~N~l~~~~~~ 146 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHN------------------------LNLLSLYDNKLQTIAKG 146 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT------------------------CCEEECCSSCCSCCCTT
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCC------------------------CCEEECCCCcCCEECHH
Confidence 999766666888999999999999888766665555554 45555555555544444
Q ss_pred hccCCCCCcEEEccccccC
Q 005177 264 ELSNLTKLESLFLFRNQLA 282 (710)
Q Consensus 264 ~l~~l~~L~~L~L~~n~l~ 282 (710)
.+..+++|+.|+|++|.+.
T Consensus 147 ~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 147 TFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp TTTTCTTCCEEECCSSCEE
T ss_pred HHhCCCCCCEEEeCCCCcC
Confidence 5555666666666666654
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.4e-19 Score=189.83 Aligned_cols=126 Identities=26% Similarity=0.175 Sum_probs=103.7
Q ss_pred EcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCcccc-CCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCC
Q 005177 81 NLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159 (710)
Q Consensus 81 ~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N 159 (710)
+++++++.. +|..+ ...++.|+|++|+|++..+..+. ++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 24 ~c~~~~l~~-iP~~~----~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 24 SCSKQQLPN-VPQSL----PSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp ECCSSCCSS-CCSSC----CTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeCCCCcCc-cCccC----CCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 444445543 45444 34688999999999877777776 8999999999999999888888999999999999999
Q ss_pred CCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCC
Q 005177 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLND 211 (710)
Q Consensus 160 ~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 211 (710)
++++..+..|.++++|++|+|++|++++..|..|.++++|+.|+|++|.+++
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 150 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR 150 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe
Confidence 9987777788899999999999999988888888889999999999888875
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=2e-21 Score=219.48 Aligned_cols=202 Identities=19% Similarity=0.164 Sum_probs=117.4
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCC-------------CCCCCChhhcCCCCCCEEE-CCCCCCCcCC
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNN-------------FSGHFPGGIQSLRNLLVLD-AFSNSFSGSV 165 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-------------l~~~~p~~l~~L~~L~~L~-L~~N~l~~~~ 165 (710)
.+.|+.|+|++|.++ .+|.+++++++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+.
T Consensus 348 ~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~--- 423 (567)
T 1dce_A 348 DEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD--- 423 (567)
T ss_dssp TTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH---
T ss_pred CccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc---
Confidence 566777777777775 667777777777777776654 4556666666666666666 4444322
Q ss_pred chhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCC
Q 005177 166 PAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMS 245 (710)
Q Consensus 166 p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~ 245 (710)
+|+.+.+++|.++.. |. ..|+.|+|++|.+++ +|. ++.+++|+.|++++|.++ .+|..+++++
T Consensus 424 --------~L~~l~l~~n~i~~l-~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 486 (567)
T 1dce_A 424 --------DLRSKFLLENSVLKM-EY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALR 486 (567)
T ss_dssp --------HHHHHHHHHHHHHHH-HH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCT
T ss_pred --------hhhhhhhhccccccc-Cc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCC
Confidence 111111222222211 10 124445555555443 343 445555555555555554 4555566666
Q ss_pred ccchhccccccCCccCchhccCCCCCcEEEccccccCCCC-CccccCCCCCCEEEccCCCCCCCCCcc---ccCCCCCCE
Q 005177 246 EVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQV-PWEFSRVTTLKSLDLSDNRLSGPIPES---FADLKNLRL 321 (710)
Q Consensus 246 ~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~---~~~l~~L~~ 321 (710)
+|+.|+|++|++++ +| .++.+++|+.|+|++|++++.. |..+..+++|+.|+|++|.+++.+|.. +..+++|+.
T Consensus 487 ~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~ 564 (567)
T 1dce_A 487 CLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSS 564 (567)
T ss_dssp TCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSE
T ss_pred CCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCc
Confidence 66666666666665 45 5667777777777777777665 667777777777777777776654421 234677777
Q ss_pred EEc
Q 005177 322 LSL 324 (710)
Q Consensus 322 L~L 324 (710)
|++
T Consensus 565 L~l 567 (567)
T 1dce_A 565 ILT 567 (567)
T ss_dssp EEC
T ss_pred cCC
Confidence 754
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.78 E-value=8.2e-19 Score=181.82 Aligned_cols=191 Identities=28% Similarity=0.358 Sum_probs=152.9
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEcc
Q 005177 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (710)
Q Consensus 102 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~ 181 (710)
++..+++..+.+.+..+ +..+++|++|++++|.+... | .+..+++|++|+|++|.+++..| +.++++|++|+|+
T Consensus 25 ~~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~ 98 (291)
T 1h6t_A 25 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLD 98 (291)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECC
T ss_pred HHHHHHhcCCCcccccc--hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECC
Confidence 34455677777765433 45788899999999988754 4 48889999999999999986544 8889999999999
Q ss_pred CCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccC
Q 005177 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261 (710)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~ 261 (710)
+|.+++ +| .+..+++|++|++++|.+++. + .+..+++|+.|++++|++++.
T Consensus 99 ~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~------------------------~l~~l~~L~~L~l~~n~l~~~- 149 (291)
T 1h6t_A 99 ENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--N------------------------GLVHLPQLESLYLGNNKITDI- 149 (291)
T ss_dssp SSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--G------------------------GGGGCTTCCEEECCSSCCCCC-
T ss_pred CCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--h------------------------hhcCCCCCCEEEccCCcCCcc-
Confidence 998875 33 488888888888888887642 1 244567788888888888754
Q ss_pred chhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCccc
Q 005177 262 PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGT 332 (710)
Q Consensus 262 p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 332 (710)
..+..+++|+.|++++|.+++..| +..+++|+.|++++|.+++ +| .+..+++|+.|++++|+++..
T Consensus 150 -~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 150 -TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp -GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEECC
T ss_pred -hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccCC
Confidence 568899999999999999997655 8899999999999999986 44 489999999999999999853
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.2e-18 Score=186.43 Aligned_cols=177 Identities=19% Similarity=0.167 Sum_probs=149.2
Q ss_pred cEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhc-CCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccC
Q 005177 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQ-SLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182 (710)
Q Consensus 104 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~-~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~ 182 (710)
+.+++++|.++ .+|..+. ..+++|+|++|++++..+..+. ++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 46889999987 5776554 4589999999999988887787 899999999999999987788899999999999999
Q ss_pred CCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccc---cCCCccchhccccccCCc
Q 005177 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQL---GNMSEVQYLDIAGANLSG 259 (710)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l---~~l~~L~~L~ls~n~l~g 259 (710)
|++++..+..|.++++|++|+|++|.+++..|..+..+++|+.|++++|.+++..+..+ ..+++|+.|+|++|++++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 99998777789999999999999999998888899999999999999999886433334 578999999999999997
Q ss_pred cCchhccCCCC--CcEEEccccccCC
Q 005177 260 SIPKELSNLTK--LESLFLFRNQLAG 283 (710)
Q Consensus 260 ~~p~~l~~l~~--L~~L~L~~n~l~~ 283 (710)
..+..+..++. ++.|+|++|.+.-
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred cCHHHhhhccHhhcceEEecCCCccC
Confidence 66677777776 4889999998864
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=5.1e-21 Score=216.23 Aligned_cols=217 Identities=16% Similarity=0.160 Sum_probs=154.6
Q ss_pred cCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccc
Q 005177 146 QSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTH 225 (710)
Q Consensus 146 ~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 225 (710)
..+++|+.|+|++|.++ .+|.++++|++|+.|++++|.....+|.. +..+.+.+.+|..++.+++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~l-----------l~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILL-----------MRALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHH-----------HHHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHH-----------HHhcccccCCHHHHHHHHhccc
Confidence 34566666666666665 56666666666666666554321111100 0112245566777777777777
Q ss_pred cc-cccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCC
Q 005177 226 ME-IGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNR 304 (710)
Q Consensus 226 L~-l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 304 (710)
|+ ++.|.+ ..|+.+.+++|.++...+ ..|+.|+|++|.+++ +|. +..+++|+.|+|++|+
T Consensus 414 L~~l~~n~~-----------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~ 474 (567)
T 1dce_A 414 VDPMRAAYL-----------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNR 474 (567)
T ss_dssp HCGGGHHHH-----------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSC
T ss_pred Ccchhhccc-----------chhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccc
Confidence 77 555543 356667777777664322 248889999999986 565 8889999999999999
Q ss_pred CCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCC-CcccCCCCCCcEEECCCCcCCccCcc
Q 005177 305 LSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSL-PENLGRNSKLRWVDVSTNNFNGSIPP 383 (710)
Q Consensus 305 l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~-p~~l~~~~~L~~L~ls~N~l~g~ip~ 383 (710)
++ .+|..++.+++|+.|+|++|++++ +| .++.+++|++|+|++|.+++.. |..++.+++|+.|++++|.+++..|.
T Consensus 475 l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 475 LR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred cc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 98 788899999999999999999986 67 7889999999999999999876 88899999999999999999876542
Q ss_pred c---ccCCCceeeEec
Q 005177 384 D---ICSGGVLFKLIL 396 (710)
Q Consensus 384 ~---~~~~~~L~~l~l 396 (710)
. +..+++|+.|++
T Consensus 552 ~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 552 QERLAEMLPSVSSILT 567 (567)
T ss_dssp TTHHHHHCTTCSEEEC
T ss_pred HHHHHHHCcccCccCC
Confidence 2 123567777653
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.5e-18 Score=170.51 Aligned_cols=154 Identities=21% Similarity=0.251 Sum_probs=118.5
Q ss_pred cEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCC
Q 005177 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 183 (710)
Q Consensus 104 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n 183 (710)
+.++.+++.+. .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|.++...+..|.++++|++|+|++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 45788888885 6776554 88999999999999988999999999999999999998666677899999999999999
Q ss_pred CCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCch
Q 005177 184 YFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPK 263 (710)
Q Consensus 184 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~ 263 (710)
++++..+..|..+++|++|+|++|.++ .+|..+..++ +|++|++++|++++..+.
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~------------------------~L~~L~L~~N~l~~~~~~ 153 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLT------------------------HLTHLALDQNQLKSIPHG 153 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCT------------------------TCSEEECCSSCCCCCCTT
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCC------------------------CCCEEECCCCcCCccCHH
Confidence 999877777889999999999999887 5565555544 455555555555544444
Q ss_pred hccCCCCCcEEEccccccCCCC
Q 005177 264 ELSNLTKLESLFLFRNQLAGQV 285 (710)
Q Consensus 264 ~l~~l~~L~~L~L~~n~l~~~~ 285 (710)
.+..+++|+.|++++|.+....
T Consensus 154 ~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 154 AFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp TTTTCTTCCEEECTTSCBCTTB
T ss_pred HHhCCCCCCEEEeeCCCccCCc
Confidence 4556666666666666665443
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.77 E-value=7.4e-20 Score=213.05 Aligned_cols=223 Identities=17% Similarity=0.249 Sum_probs=103.5
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCC---------CCChhhcCCCCCCEEECCCCCCCcCCchhccC
Q 005177 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG---------HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQ 171 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~---------~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~ 171 (710)
+.++.|+|++|.+.. +|..+ |+.++|+.|.+.+ ..|..+..+++|+.|+|++|.+. .+|..+.+
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~~-----l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~ 245 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQAL-----LQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFK 245 (727)
T ss_dssp -------------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGG
T ss_pred CccceEEeeCCCCCc-chhhH-----hhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcC
Confidence 457889999998875 34433 3334444444332 44667788888888888888887 67777778
Q ss_pred CCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhc
Q 005177 172 LEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLD 251 (710)
Q Consensus 172 L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ 251 (710)
+++|++|+|++|.++ .+|..|++|++|++|+|++|.++ .+|..++.|++|++|+|++|.++ .+|..++++++|++|+
T Consensus 246 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~ 322 (727)
T 4b8c_D 246 YDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLG 322 (727)
T ss_dssp CCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEE
T ss_pred CCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEe
Confidence 888888888888888 77888888888888888888887 67777777777777777777765 6666677777777777
Q ss_pred cccccCCccCchhccCCCC-CcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCc
Q 005177 252 IAGANLSGSIPKELSNLTK-LESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS 330 (710)
Q Consensus 252 ls~n~l~g~~p~~l~~l~~-L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 330 (710)
|++|.+++.+|..+..+.. +..|+|++|.+++.+|. .|+.|+++.|... -..+ +.+.
T Consensus 323 L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~------~l~~l~l~~n~~~---~~~~-------------~~l~ 380 (727)
T 4b8c_D 323 VEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH------ERRFIEINTDGEP---QREY-------------DSLQ 380 (727)
T ss_dssp CTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC------C------------------------------------
T ss_pred CCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc------ccceeEeeccccc---cccc-------------CCcc
Confidence 7777777766666543321 12355666666665553 2344555544110 0111 1333
Q ss_pred ccCCcccCCCCCCcEEeccCCCCCC
Q 005177 331 GTVPESLVQLPSLEILFIWNNYFSG 355 (710)
Q Consensus 331 g~~p~~~~~l~~L~~L~L~~N~l~g 355 (710)
+..+..+..+..+....+++|-+.+
T Consensus 381 ~~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 381 QSTEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp ---------------------CCCG
T ss_pred ccccchhhcccccceeeeecccccc
Confidence 3444455666777778888887763
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.2e-18 Score=177.14 Aligned_cols=133 Identities=14% Similarity=0.094 Sum_probs=104.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcE--EEEEEeeccchh-------------------------HHHHHHHHHHHhccCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGIT--VSVKKIEWGATR-------------------------IKIVSEFITRIGTVRHK 501 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~--vAvK~l~~~~~~-------------------------~~~~~~e~~~l~~l~H~ 501 (710)
..+.||+|+||.||+|.. .+|+. ||||.++..... ...+.+|++.+.+++|+
T Consensus 51 i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 130 (258)
T 1zth_A 51 MGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEA 130 (258)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHT
T ss_pred hCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhC
Confidence 457899999999999997 78999 999987543111 13578899999999988
Q ss_pred Cc--eeEEEEEEcCCceeEEEeecCC-C----ChhhhhhcCCCHHHHHHHHHHHHHHHHHHh-cCCCCCceecCCCCCCe
Q 005177 502 NL--IRLLGFCYNRHQAYLLYDYLPN-G----NLSEKIRTKRDWAAKYKIVLGVARGLCFLH-HDCYPAIPHGDLKASNI 573 (710)
Q Consensus 502 ni--v~l~g~~~~~~~~~lv~Ey~~~-g----sL~~~l~~~~~~~~~~~i~~~ia~gL~yLH-~~~~~~iiHrDlk~~Ni 573 (710)
++ ...+++ +..++||||+.+ | +|.++... .++.....++.|++.||.||| +. +|+||||||+||
T Consensus 131 ~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~---givHrDlkp~NI 202 (258)
T 1zth_A 131 GVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-LKELDVEGIFNDVVENVKRLYQEA---ELVHADLSEYNI 202 (258)
T ss_dssp TCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-GGGSCHHHHHHHHHHHHHHHHHTS---CEECSSCSTTSE
T ss_pred CCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-cChHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHE
Confidence 64 334432 367899999942 4 56555432 224456789999999999999 87 999999999999
Q ss_pred EecCCCceEEcccCccccc
Q 005177 574 VFDENMEPHLAEFGFKYLT 592 (710)
Q Consensus 574 Ll~~~~~~kl~DfGla~~~ 592 (710)
|++. .++|+|||+|...
T Consensus 203 Ll~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 203 MYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp EESS--SEEECCCTTCEET
T ss_pred EEcC--cEEEEECcccccC
Confidence 9998 9999999998654
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.7e-18 Score=167.10 Aligned_cols=132 Identities=20% Similarity=0.282 Sum_probs=71.6
Q ss_pred cCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCe
Q 005177 122 FNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEF 201 (710)
Q Consensus 122 ~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 201 (710)
..+++|++|++++|.++ .+| .+..+++|++|++++|.++ .++.+..+++|++|++++|.+++..|..++.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 45556666666666665 344 4666666666666666543 2335666666666666666666555666666666666
Q ss_pred EEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCC
Q 005177 202 LHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS 258 (710)
Q Consensus 202 L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~ 258 (710)
|++++|.+++..|..++.+++|++|++++|.+.+.+| .+..+++|++|++++|+++
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~ 172 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVH 172 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCC
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCc
Confidence 6666666655445444444444444444443222222 2333344444444444433
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.73 E-value=4.5e-18 Score=165.56 Aligned_cols=152 Identities=16% Similarity=0.203 Sum_probs=122.6
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
+++|+.|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|.+++..|..++.+++|++|+
T Consensus 43 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 43 MNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred cCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 678899999999987 566 6888999999999999765 344788899999999999999887888899999999999
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCC
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS 258 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~ 258 (710)
|++|.+++..|..++.+++|++|++++|.+.+.+| .+..+++|+.|++++|.+++ ++ .+..+++|+.|++++|++.
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC---
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccC
Confidence 99999988788888999999999999998444566 68888999999999998875 33 5666667777777776654
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.72 E-value=6.3e-17 Score=156.71 Aligned_cols=136 Identities=25% Similarity=0.325 Sum_probs=114.9
Q ss_pred CceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCc-cccCCCCCcEEECcCCCCCCC
Q 005177 62 ACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPV-EIFNLTSLISLDISRNNFSGH 140 (710)
Q Consensus 62 ~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~ 140 (710)
.|.|..+.|.. +++ +.+|..+ ...|++|+|++|.+++..+. .|.++++|++|+|++|++++.
T Consensus 7 ~C~~~~l~~s~------------~~l-~~ip~~~----~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 69 (192)
T 1w8a_A 7 HCEGTTVDCTG------------RGL-KEIPRDI----PLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGI 69 (192)
T ss_dssp EEETTEEECTT------------SCC-SSCCSCC----CTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCB
T ss_pred EECCCEEEcCC------------CCc-CcCccCC----CCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCc
Confidence 46776666654 344 3455544 34799999999999876664 488999999999999999999
Q ss_pred CChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCc
Q 005177 141 FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP 214 (710)
Q Consensus 141 ~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 214 (710)
.|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++|.+.+..+
T Consensus 70 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 70 EPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 89999999999999999999998888889999999999999999999999999999999999999999887654
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.71 E-value=3.1e-17 Score=158.93 Aligned_cols=132 Identities=17% Similarity=0.249 Sum_probs=120.1
Q ss_pred cEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCCh-hhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccC
Q 005177 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPG-GIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182 (710)
Q Consensus 104 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~ 182 (710)
+++++++|.++ .+|..+.. +|++|+|++|++++..+. .|+.+++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 68999999995 78876654 899999999999987765 489999999999999999999899999999999999999
Q ss_pred CCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCC
Q 005177 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIP 238 (710)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p 238 (710)
|++++..|..|.++++|++|+|++|++++..|..+..+++|++|++++|.+.+..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 99999888889999999999999999999999999999999999999998887654
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.71 E-value=9e-18 Score=171.24 Aligned_cols=170 Identities=24% Similarity=0.302 Sum_probs=111.5
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
+.++..++|++|.+++. + .+..+++|++|++++|+++. +| .+..+++|++|+|++|.+++..| +.++++|++|+
T Consensus 18 l~~l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 44567778888888743 3 57788888888888888874 45 67888888888888888886444 88888888888
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCc
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g 259 (710)
|++|++++ +|.. .. ++|+.|++++|.+++. | .+..+++ |+.|++++|++++
T Consensus 92 L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~~-~-~l~~l~~------------------------L~~L~Ls~N~i~~ 142 (263)
T 1xeu_A 92 VNRNRLKN-LNGI-PS-ACLSRLFLDNNELRDT-D-SLIHLKN------------------------LEILSIRNNKLKS 142 (263)
T ss_dssp CCSSCCSC-CTTC-CC-SSCCEEECCSSCCSBS-G-GGTTCTT------------------------CCEEECTTSCCCB
T ss_pred CCCCccCC-cCcc-cc-CcccEEEccCCccCCC-h-hhcCccc------------------------ccEEECCCCcCCC
Confidence 88888875 4432 23 7888888888887652 2 3444444 4444444444443
Q ss_pred cCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCC
Q 005177 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGP 308 (710)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 308 (710)
. + .+..+++|+.|++++|++++. ..+..+++|+.|++++|.+++.
T Consensus 143 ~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 143 I-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp C-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred C-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 2 2 344555555555555555543 3445555566666665555543
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.5e-17 Score=169.57 Aligned_cols=171 Identities=18% Similarity=0.278 Sum_probs=117.5
Q ss_pred CCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeE
Q 005177 123 NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFL 202 (710)
Q Consensus 123 ~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 202 (710)
++.+++.+++++|.+++.. .+..+++|++|++++|.++ .+| .+..+++|++|+|++|++++..| +.++++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 4666777888888887543 5778888888888888887 355 67788888888888888875433 7788888888
Q ss_pred EecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccC
Q 005177 203 HLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLA 282 (710)
Q Consensus 203 ~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~ 282 (710)
++++|++++ +|. +.. ++|+.|++++|++++. + .+..+++|+.|++++|+++
T Consensus 91 ~L~~N~l~~-l~~-------------------------~~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~ 141 (263)
T 1xeu_A 91 SVNRNRLKN-LNG-------------------------IPS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLK 141 (263)
T ss_dssp ECCSSCCSC-CTT-------------------------CCC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCC
T ss_pred ECCCCccCC-cCc-------------------------ccc-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCC
Confidence 888887764 221 111 4566667777766642 2 4666777777777777776
Q ss_pred CCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCccc
Q 005177 283 GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGT 332 (710)
Q Consensus 283 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 332 (710)
+. + .+..+++|+.|++++|++++. ..+..+++|+.|++++|.+++.
T Consensus 142 ~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 142 SI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred CC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 53 2 466667777777777777654 4566666666666666666543
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.66 E-value=9.8e-16 Score=146.16 Aligned_cols=137 Identities=23% Similarity=0.302 Sum_probs=112.9
Q ss_pred CCceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCC
Q 005177 61 YACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGH 140 (710)
Q Consensus 61 ~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 140 (710)
..|+|.++.|+.. ++. .+|..+ .+.|++|+|++|.+++..+..|.++++|++|+|++|++++.
T Consensus 5 C~C~~~~l~~~~~------------~l~-~~p~~~----~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 67 (177)
T 2o6r_A 5 CSCSGTEIRCNSK------------GLT-SVPTGI----PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSL 67 (177)
T ss_dssp CEEETTEEECCSS------------CCS-SCCTTC----CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCC
T ss_pred CEeCCCEEEecCC------------CCc-cCCCCC----CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEe
Confidence 3488999999752 121 233322 46799999999999876666788999999999999999987
Q ss_pred CChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCc
Q 005177 141 FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP 214 (710)
Q Consensus 141 ~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 214 (710)
.+..|..+++|++|++++|.+++..+..+.++++|++|+|++|++++..+..+..+++|++|++++|.+.+..|
T Consensus 68 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 68 PDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 77778999999999999999998777778999999999999999997666667889999999999998886544
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.65 E-value=1.2e-16 Score=147.86 Aligned_cols=128 Identities=16% Similarity=0.168 Sum_probs=104.7
Q ss_pred CCCCcEEECCCCcCc-ccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEE
Q 005177 100 FNELVDLNLSHNSFS-GQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 178 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L 178 (710)
.++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..++++++|++|+|++|.+++.+|..+.++++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 457899999999998 78888888999999999999999876 678889999999999999998788888889999999
Q ss_pred EccCCCCCCC-CCcccCCCCCCCeEEecCCcCCCCCc---ccccccccccccccc
Q 005177 179 NLAGSYFSGP-IPSQFGSFKSLEFLHLAGNLLNDQIP---AELGMLKTVTHMEIG 229 (710)
Q Consensus 179 ~L~~n~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~l~ 229 (710)
++++|.+++. .|..++.+++|++|++++|.+++..+ ..+..+++|+.|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 9999998863 34778888889999998888876544 355666666666553
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.65 E-value=2.3e-16 Score=149.12 Aligned_cols=132 Identities=16% Similarity=0.127 Sum_probs=100.7
Q ss_pred CCCCcEEECCCCcCc-ccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEE
Q 005177 100 FNELVDLNLSHNSFS-GQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 178 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L 178 (710)
.+.|+.|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+.++++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 467888899988887 67888888888888888888888865 678888888888888888887788888888888888
Q ss_pred EccCCCCCCCC-CcccCCCCCCCeEEecCCcCCCCCc---ccccccccccccccccccc
Q 005177 179 NLAGSYFSGPI-PSQFGSFKSLEFLHLAGNLLNDQIP---AELGMLKTVTHMEIGYNFY 233 (710)
Q Consensus 179 ~L~~n~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~l~~n~~ 233 (710)
+|++|.+++.. +..+..+++|+.|++++|.+++..+ ..+..+++|++|+++.|..
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCCh
Confidence 88888887532 2678888888888888888775433 2455555555555554443
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.65 E-value=4.8e-17 Score=171.67 Aligned_cols=282 Identities=15% Similarity=0.085 Sum_probs=132.8
Q ss_pred CCCCcEEECCCCcCcccCCccccC-CCCCcEEECcCCCCC--CCCChhhcCCCCCCEEECCCCCCCcCCchhccC-----
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFN-LTSLISLDISRNNFS--GHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQ----- 171 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~--~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~----- 171 (710)
+++++.|.++++- .+.--..+.. +++|++|||++|++. ...+. .++.++.+++..|.+. +..|.+
T Consensus 24 ~~~l~~L~l~g~i-~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~I~---~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGKL-NAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANFVP---AYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEEE-CHHHHHHHHHSCTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTEEC---TTTTEEEETTE
T ss_pred hCceeEEEEeccc-cHHHHHHHHHhhccCeEEecCcceeEEecCccc---cccccccccccccccC---HHHhccccccc
Confidence 5568888887542 1111122333 778888888888877 22222 2222444444444322 234444
Q ss_pred ---CCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccc----cccCCccccCC
Q 005177 172 ---LEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFY----QGNIPWQLGNM 244 (710)
Q Consensus 172 ---L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~----~g~~p~~l~~l 244 (710)
+++|+.|+|.+ .++..-+..|.++++|+.|++++|.+....+..|....++..+..+.+.. ..--...+.++
T Consensus 97 ~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~ 175 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEG 175 (329)
T ss_dssp EEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEES
T ss_pred ccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccc
Confidence 77777777777 66655556677777777777777777655555666655555554443211 00001122233
Q ss_pred Cccc-hhccccccCCccCchhc----cCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCC
Q 005177 245 SEVQ-YLDIAGANLSGSIPKEL----SNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNL 319 (710)
Q Consensus 245 ~~L~-~L~ls~n~l~g~~p~~l----~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 319 (710)
.+|+ .+++... +.++..+ ....++..+.+.++-...........+++|+.|+|++|+++...+..|.++++|
T Consensus 176 ~~L~~~i~~~~~---~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L 252 (329)
T 3sb4_A 176 EPLETTIQVGAM---GKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYL 252 (329)
T ss_dssp CCCEEEEEECTT---CCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTC
T ss_pred cccceeEEecCC---CcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCC
Confidence 3333 2222111 1111111 112333444433321110000001124455555555555544334445555555
Q ss_pred CEEEcccccCcccCCcccCCCCCCc-EEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeE
Q 005177 320 RLLSLMYNEMSGTVPESLVQLPSLE-ILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKL 394 (710)
Q Consensus 320 ~~L~Ls~N~l~g~~p~~~~~l~~L~-~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l 394 (710)
+.++|.+| ++..-+..|..+++|+ .+++.+ .++..-+..+.+|++|+.++++.|+++.--+..|.++.+|+.+
T Consensus 253 ~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~l 326 (329)
T 3sb4_A 253 LKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLI 326 (329)
T ss_dssp CEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEE
T ss_pred CEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhh
Confidence 55555554 4433334455555555 555554 3443333455555555555555555553333344445555544
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.63 E-value=2.6e-15 Score=145.33 Aligned_cols=111 Identities=25% Similarity=0.323 Sum_probs=98.0
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
.+.|++|+|++|.++ .+|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|+
T Consensus 30 ~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~ 108 (193)
T 2wfh_A 30 PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLS 108 (193)
T ss_dssp CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEE
Confidence 357899999999997 7788899999999999999999988888899999999999999999988888899999999999
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCCcCCC
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLND 211 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 211 (710)
|++|.+++..+..|..+++|+.|+|++|.+..
T Consensus 109 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 109 LHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 99999987666678889999999999988754
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.63 E-value=4.6e-16 Score=147.08 Aligned_cols=134 Identities=19% Similarity=0.213 Sum_probs=96.5
Q ss_pred CCCCCcEEECcCCCCC-CCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCe
Q 005177 123 NLTSLISLDISRNNFS-GHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEF 201 (710)
Q Consensus 123 ~l~~L~~L~Ls~N~l~-~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 201 (710)
..++|++|+|++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|+|++|.+++.+|..+.++++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3478889999999887 77888888888888888888888865 67888888888888888888777777777888888
Q ss_pred EEecCCcCCCCC-cccccccccccccccccccccccCCccccCCCccchhccccccCCccCc---hhccCCCCCcEEEcc
Q 005177 202 LHLAGNLLNDQI-PAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP---KELSNLTKLESLFLF 277 (710)
Q Consensus 202 L~L~~N~l~~~~-p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p---~~l~~l~~L~~L~L~ 277 (710)
|++++|.+++.. +..+.. +++|++|++++|.+++..+ ..+..+++|++|+++
T Consensus 100 L~Ls~N~l~~~~~~~~l~~------------------------l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 155 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKK------------------------LECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGY 155 (168)
T ss_dssp EECBSSSCCSSGGGGGGSS------------------------CSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTE
T ss_pred EeccCCccCcchhHHHHhc------------------------CCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCC
Confidence 888888876531 134444 4555555555555554433 345566666666666
Q ss_pred ccccC
Q 005177 278 RNQLA 282 (710)
Q Consensus 278 ~n~l~ 282 (710)
+|.+.
T Consensus 156 ~n~~~ 160 (168)
T 2ell_A 156 DREDQ 160 (168)
T ss_dssp ETTSC
T ss_pred CCChh
Confidence 66554
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.63 E-value=2.1e-15 Score=146.02 Aligned_cols=128 Identities=23% Similarity=0.304 Sum_probs=110.9
Q ss_pred cEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCC
Q 005177 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 183 (710)
Q Consensus 104 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n 183 (710)
+.+++++|.++ .+|..+. ++|++|+|++|+++ .+|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 34666677765 5676553 68999999999998 67889999999999999999999888889999999999999999
Q ss_pred CCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccc
Q 005177 184 YFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG 235 (710)
Q Consensus 184 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g 235 (710)
++++..|..|.++++|++|+|++|.++...+..+..+++|+.|++++|.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 9999888899999999999999999997666678888888888888887654
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.62 E-value=2.8e-15 Score=142.99 Aligned_cols=133 Identities=17% Similarity=0.214 Sum_probs=111.9
Q ss_pred CcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccC
Q 005177 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182 (710)
Q Consensus 103 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~ 182 (710)
.+.+++++|+++ .+|..+ .++|++|++++|++++..+..|+.+++|++|++++|.+++..+..+.++++|++|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 467899999987 566544 37899999999999987777889999999999999999977777789999999999999
Q ss_pred CCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCC
Q 005177 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIP 238 (710)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p 238 (710)
|++++..+..|..+++|++|++++|.+++..+..+..+++|++|++++|.+.+..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 99998777788999999999999999986555556778888888888887766543
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.61 E-value=3.6e-16 Score=144.61 Aligned_cols=109 Identities=19% Similarity=0.270 Sum_probs=79.7
Q ss_pred CCCCcEEECcCCCCC-CCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeE
Q 005177 124 LTSLISLDISRNNFS-GHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFL 202 (710)
Q Consensus 124 l~~L~~L~Ls~N~l~-~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 202 (710)
.++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..++++++|++|+|++|.+++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 467888888888887 77888788888888888888888765 667888888888888888887777777778888888
Q ss_pred EecCCcCCCC-Cccccccccccccccccccccc
Q 005177 203 HLAGNLLNDQ-IPAELGMLKTVTHMEIGYNFYQ 234 (710)
Q Consensus 203 ~L~~N~l~~~-~p~~l~~l~~L~~L~l~~n~~~ 234 (710)
++++|.+++. .|..++.+++|++|++++|.++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~ 126 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVT 126 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGG
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCccc
Confidence 8888877652 2344444444444444444444
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.61 E-value=7.7e-16 Score=162.40 Aligned_cols=261 Identities=13% Similarity=0.085 Sum_probs=175.3
Q ss_pred CCCCcEEECCCCcCc--ccCCccccCCCCCcEEECcCCCCCCCCChhhcC--------CCCCCEEECCCCCCCcCCchhc
Q 005177 100 FNELVDLNLSHNSFS--GQFPVEIFNLTSLISLDISRNNFSGHFPGGIQS--------LRNLLVLDAFSNSFSGSVPAEI 169 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~--------L~~L~~L~L~~N~l~~~~p~~~ 169 (710)
+++|+.|||++|++. ...+. .++.++.+.+..|.+ .+..|.+ +++|+.|+|.+ .++..-+..|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~I---~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANFV---PAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTEE---CTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCccc---ccccccccccccccc---CHHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 678999999999987 22222 223355666666532 2345666 99999999998 7876667789
Q ss_pred cCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCc----CCCCCccccccccccc-ccccccccccccCCccc---
Q 005177 170 SQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNL----LNDQIPAELGMLKTVT-HMEIGYNFYQGNIPWQL--- 241 (710)
Q Consensus 170 ~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~----l~~~~p~~l~~l~~L~-~L~l~~n~~~g~~p~~l--- 241 (710)
.++++|+.|++++|.++...+..|.++.++..+.+..+. ....-+..+..+..|+ .+.+... +.++..+
T Consensus 121 ~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~---~~l~~~~~~~ 197 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAM---GKLEDEIMKA 197 (329)
T ss_dssp TTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTT---CCHHHHHHHT
T ss_pred hcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCC---CcHHHHHhhc
Confidence 999999999999999887777888888777777665532 1112222333444444 2222111 1111111
Q ss_pred -cCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCC
Q 005177 242 -GNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLR 320 (710)
Q Consensus 242 -~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 320 (710)
-...+++.+.+.++-...........+++|+.|++++|+++...+..|.++++|+.|++++| +...-+..|.++++|+
T Consensus 198 ~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~ 276 (329)
T 3sb4_A 198 GLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLA 276 (329)
T ss_dssp TCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCC
T ss_pred ccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhcc
Confidence 12233444444433111111111123788999999998888777778889999999999887 7666667889999999
Q ss_pred -EEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEEC
Q 005177 321 -LLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDV 372 (710)
Q Consensus 321 -~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~l 372 (710)
.+++.+ +++..-+..|..+++|+.+++++|.++..-+..+.++++|+.++.
T Consensus 277 ~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 277 GTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 999987 677666788899999999999999988666678888999988764
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.59 E-value=2.1e-16 Score=167.05 Aligned_cols=133 Identities=9% Similarity=0.032 Sum_probs=96.2
Q ss_pred chhhhhhcCCCCCccEEEEcCCCcEEEEEEeeccch---------------hHHH--------HHHHHHHHhccCCCCce
Q 005177 448 STECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---------------RIKI--------VSEFITRIGTVRHKNLI 504 (710)
Q Consensus 448 ~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~---------------~~~~--------~~~e~~~l~~l~H~niv 504 (710)
+.....||+|++|.||+|..++|+.||||.++.+.. .... ..+|...|.++.+..+.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 347789999999999999999999999998764210 0111 23455566666444332
Q ss_pred eEEEEEEcCCceeEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC-----
Q 005177 505 RLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM----- 579 (710)
Q Consensus 505 ~l~g~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~----- 579 (710)
-..-+.. ...+|||||+++++|.++... +....++.|++.||.|||+. +||||||||.|||+++++
T Consensus 177 vp~p~~~--~~~~LVME~i~G~~L~~l~~~----~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dgd~~d~ 247 (397)
T 4gyi_A 177 VPEPIAQ--SRHTIVMSLVDALPMRQVSSV----PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEKDAEDP 247 (397)
T ss_dssp CCCEEEE--ETTEEEEECCSCEEGGGCCCC----SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEECSSCT
T ss_pred CCeeeec--cCceEEEEecCCccHhhhccc----HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCCCcccc
Confidence 1111111 234799999999888766432 23456789999999999998 999999999999999876
Q ss_pred -----ceEEcccCcc
Q 005177 580 -----EPHLAEFGFK 589 (710)
Q Consensus 580 -----~~kl~DfGla 589 (710)
.+.|+||+-+
T Consensus 248 ~~~~~~~~iID~~Q~ 262 (397)
T 4gyi_A 248 SSITLTPIIIXFPQM 262 (397)
T ss_dssp TSEEEEEEECCCTTC
T ss_pred cccccceEEEEeCCc
Confidence 3889999843
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.52 E-value=4.1e-17 Score=158.85 Aligned_cols=130 Identities=15% Similarity=0.193 Sum_probs=76.8
Q ss_pred CCCCcEEECCCCcCcccCCc------cccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCC
Q 005177 100 FNELVDLNLSHNSFSGQFPV------EIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLE 173 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~ 173 (710)
...++.++++.+.+.|.+|. .+.++++|++|+|++|.+++ +| .+..+++|++|++++|.++ .+|..+..++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~ 93 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVAD 93 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCC
Confidence 45566666666666666665 66666677777777776665 45 5666666666666666666 4566666666
Q ss_pred CCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCc-cccccccccccccccccccc
Q 005177 174 HLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP-AELGMLKTVTHMEIGYNFYQ 234 (710)
Q Consensus 174 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~l~~n~~~ 234 (710)
+|++|+|++|++++ +| .+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 94 ~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~ 153 (198)
T 1ds9_A 94 TLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp HCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHH
T ss_pred cCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccc
Confidence 66666666666664 33 45566666666666666553211 23344444444444444433
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.51 E-value=7.6e-17 Score=156.95 Aligned_cols=150 Identities=21% Similarity=0.309 Sum_probs=95.8
Q ss_pred ccCCCCCcEEECcCCCCCCCCCh------hhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccC
Q 005177 121 IFNLTSLISLDISRNNFSGHFPG------GIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFG 194 (710)
Q Consensus 121 ~~~l~~L~~L~Ls~N~l~~~~p~------~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~ 194 (710)
+.....++.++++.+.++|.+|. .+..+++|++|+|++|.+++ +| .+.++++|++|+|++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 45566777778888888877776 67777777777777777775 56 6777777777777777776 4666666
Q ss_pred CCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCc-hhccCCCCCcE
Q 005177 195 SFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP-KELSNLTKLES 273 (710)
Q Consensus 195 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p-~~l~~l~~L~~ 273 (710)
.+++|++|++++|.+++ +| .+..+++ |++|++++|++++..+ ..+..+++|++
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~------------------------L~~L~l~~N~i~~~~~~~~l~~l~~L~~ 144 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVN------------------------LRVLYMSNNKITNWGEIDKLAALDKLED 144 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHH------------------------SSEEEESEEECCCHHHHHHHTTTTTCSE
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCC------------------------CCEEECCCCcCCchhHHHHHhcCCCCCE
Confidence 66777777777777664 33 3444444 4455555555443211 24555666666
Q ss_pred EEccccccCCCCCcc----------ccCCCCCCEEE
Q 005177 274 LFLFRNQLAGQVPWE----------FSRVTTLKSLD 299 (710)
Q Consensus 274 L~L~~n~l~~~~p~~----------~~~l~~L~~L~ 299 (710)
|++++|.+++.+|.. +..+++|+.||
T Consensus 145 L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld 180 (198)
T 1ds9_A 145 LLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp EEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC
T ss_pred EEecCCccccccccccchHHHHHHHHHhCCCcEEEC
Confidence 666666665544332 55666666665
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.50 E-value=2e-14 Score=136.89 Aligned_cols=106 Identities=20% Similarity=0.163 Sum_probs=54.3
Q ss_pred CCCCcEEECCCCcCcccCCccccCCC-CCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLT-SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 178 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L 178 (710)
...|+.|+|++|.++. +|. +..+. +|++|+|++|.+++. ..++.+++|++|+|++|.+++..|..+..+++|++|
T Consensus 18 ~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 18 AVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 93 (176)
T ss_dssp TTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred cCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEE
Confidence 3455556666655552 332 33333 555555555555543 345555555555555555554333333555555555
Q ss_pred EccCCCCCCCCCc--ccCCCCCCCeEEecCCcCC
Q 005177 179 NLAGSYFSGPIPS--QFGSFKSLEFLHLAGNLLN 210 (710)
Q Consensus 179 ~L~~n~l~~~~p~--~~~~l~~L~~L~L~~N~l~ 210 (710)
+|++|.++ .+|. .+..+++|+.|++++|.++
T Consensus 94 ~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 94 ILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp ECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred ECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC
Confidence 55555553 3343 4555555555555555543
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.50 E-value=1.2e-13 Score=130.62 Aligned_cols=104 Identities=23% Similarity=0.254 Sum_probs=67.1
Q ss_pred EEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCC
Q 005177 105 DLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY 184 (710)
Q Consensus 105 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~ 184 (710)
.+++++|.++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 13 ~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 4455555554 3454442 566666666666666666666667777777777777665555556677777777777777
Q ss_pred CCCCCCcccCCCCCCCeEEecCCcCCC
Q 005177 185 FSGPIPSQFGSFKSLEFLHLAGNLLND 211 (710)
Q Consensus 185 l~~~~p~~~~~l~~L~~L~L~~N~l~~ 211 (710)
+++..+..|.++++|++|+|++|.+..
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 776555567777777777777776654
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.50 E-value=2.3e-14 Score=136.53 Aligned_cols=133 Identities=19% Similarity=0.127 Sum_probs=99.3
Q ss_pred cccCCCCCcEEECcCCCCCCCCChhhcCCC-CCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCC
Q 005177 120 EIFNLTSLISLDISRNNFSGHFPGGIQSLR-NLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKS 198 (710)
Q Consensus 120 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~-~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~ 198 (710)
.+.++++|++|++++|+++. +|. +..+. +|++|+|++|.+++. ..+..+++|++|+|++|.+++..|..|..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 46677888888888888874 454 44444 888888888888864 56788888888888888888654444578888
Q ss_pred CCeEEecCCcCCCCCcc--cccccccccccccccccccccCCcc----ccCCCccchhccccccCC
Q 005177 199 LEFLHLAGNLLNDQIPA--ELGMLKTVTHMEIGYNFYQGNIPWQ----LGNMSEVQYLDIAGANLS 258 (710)
Q Consensus 199 L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~l~~n~~~g~~p~~----l~~l~~L~~L~ls~n~l~ 258 (710)
|++|++++|.++ .+|. .+..+++|+.|++++|.+. .+|.. +..+++|++||++.|...
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 888888888884 4565 6778888888888888876 44553 777888888888887654
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.48 E-value=2.2e-13 Score=129.32 Aligned_cols=104 Identities=23% Similarity=0.222 Sum_probs=72.1
Q ss_pred EEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCC
Q 005177 105 DLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY 184 (710)
Q Consensus 105 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~ 184 (710)
.+++++|.+. .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|+
T Consensus 16 ~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 4566666663 5555543 667777777777777667777777777777777777776555556777777777777777
Q ss_pred CCCCCCcccCCCCCCCeEEecCCcCCC
Q 005177 185 FSGPIPSQFGSFKSLEFLHLAGNLLND 211 (710)
Q Consensus 185 l~~~~p~~~~~l~~L~~L~L~~N~l~~ 211 (710)
+++..+..|..+++|++|+|++|.+..
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred cceeCHHHhccccCCCEEEeCCCCccc
Confidence 776555557777777777777777653
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=99.46 E-value=1.6e-12 Score=140.34 Aligned_cols=263 Identities=10% Similarity=0.001 Sum_probs=140.1
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEc
Q 005177 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L 180 (710)
..++.+.+.++ ++..-+..|.++ +|+.++|..| ++..-...|.+. +|+.+++.. .++..-+..|.++++|+.++|
T Consensus 113 ~~l~~i~ip~~-i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPNS-VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCTT-CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECCc-cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 45555555442 332333445553 5777776655 554445555553 567776664 455444556666777777777
Q ss_pred cCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCcc
Q 005177 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS 260 (710)
Q Consensus 181 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~ 260 (710)
+.|+++......|. ..+|+.+.+.++ +...-...|..+++|+.+ ++..+ ++..
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l------------------------~l~~~-l~~I 240 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTI------------------------EIPEN-VSTI 240 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCE------------------------ECCTT-CCEE
T ss_pred CCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEE------------------------ecCCC-ccCc
Confidence 66666644344444 466666666533 333333334444444444 44432 2222
Q ss_pred CchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCC-----CCCCccccCCCCCCEEEcccccCcccCCc
Q 005177 261 IPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLS-----GPIPESFADLKNLRLLSLMYNEMSGTVPE 335 (710)
Q Consensus 261 ~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 335 (710)
-...|.+ .+|+.+.+ .+.++...+..|.++++|+.+++.+|.+. ...+..|.+|++|+.++|. +.++..-..
T Consensus 241 ~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~ 317 (401)
T 4fdw_A 241 GQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQG 317 (401)
T ss_dssp CTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTT
T ss_pred ccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhh
Confidence 2233433 45666666 33344344455666666666666655543 2234556666677777666 335544445
Q ss_pred ccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCC-CceeeEecccCC
Q 005177 336 SLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSG-GVLFKLILFSNN 400 (710)
Q Consensus 336 ~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~-~~L~~l~l~~N~ 400 (710)
.|..+++|+.+.|..| ++..-+..+.++ +|+.+++++|.+....+..+..+ ..+..+.+-.|.
T Consensus 318 aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~ 381 (401)
T 4fdw_A 318 LLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAES 381 (401)
T ss_dssp TTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGG
T ss_pred hhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHH
Confidence 6666677777776443 443334556666 67777777766653333333333 345566665543
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=99.43 E-value=2.9e-12 Score=138.29 Aligned_cols=242 Identities=7% Similarity=0.060 Sum_probs=175.6
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEc
Q 005177 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L 180 (710)
.+|+.++|..| ++..-..+|.+ .+|+.++|.. .+...-+..|.++++|+.+++..|+++..-...|. ..+|+.+.|
T Consensus 135 ~~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~l 210 (401)
T 4fdw_A 135 SQIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLL 210 (401)
T ss_dssp CCCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEEC
T ss_pred CCccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEe
Confidence 47999999877 66444556777 4799999986 67767778899999999999999999855455555 699999999
Q ss_pred cCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCcc
Q 005177 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS 260 (710)
Q Consensus 181 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~ 260 (710)
..+ ++..-...|.++++|+.+++..| ++..-...|. + .+|+.+++ .++++..
T Consensus 211 p~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~------------------------~-~~L~~i~l-p~~i~~I 262 (401)
T 4fdw_A 211 PVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFR------------------------E-SGITTVKL-PNGVTNI 262 (401)
T ss_dssp CTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTT------------------------T-CCCSEEEE-ETTCCEE
T ss_pred CCc-hheehhhHhhCCCCCCEEecCCC-ccCccccccc------------------------c-CCccEEEe-CCCccEE
Confidence 854 76666778999999999999875 3221112222 2 34555555 3344444
Q ss_pred CchhccCCCCCcEEEccccccC-----CCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCc
Q 005177 261 IPKELSNLTKLESLFLFRNQLA-----GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPE 335 (710)
Q Consensus 261 ~p~~l~~l~~L~~L~L~~n~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 335 (710)
-...|.++++|+.+++.+|.+. ...+..|.++++|+.+++. +.+...-...|.+|++|+.+.|..| ++..-+.
T Consensus 263 ~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~ 340 (401)
T 4fdw_A 263 ASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFS 340 (401)
T ss_dssp CTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTT
T ss_pred ChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHH
Confidence 4556777888888888777654 2345678888888988888 4466555677888899999998654 6655567
Q ss_pred ccCCCCCCcEEeccCCCCCCCCCcccCCCC-CCcEEECCCCcC
Q 005177 336 SLVQLPSLEILFIWNNYFSGSLPENLGRNS-KLRWVDVSTNNF 377 (710)
Q Consensus 336 ~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~-~L~~L~ls~N~l 377 (710)
.|..+ +|+.+++++|.+....+..+..++ ++..+.+..|.+
T Consensus 341 aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 341 AFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp SSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred hCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 78888 899999998887755556666663 677888776654
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.42 E-value=7.5e-13 Score=125.17 Aligned_cols=107 Identities=22% Similarity=0.286 Sum_probs=93.5
Q ss_pred CcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecC
Q 005177 127 LISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAG 206 (710)
Q Consensus 127 L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 206 (710)
.+.+++++|.++. +|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 5789999999985 676653 8999999999999998899999999999999999999987777889999999999999
Q ss_pred CcCCCCCccccccccccccccccccccccc
Q 005177 207 NLLNDQIPAELGMLKTVTHMEIGYNFYQGN 236 (710)
Q Consensus 207 N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~ 236 (710)
|++++..|..+..+++|++|++++|.+...
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 999977666788888888888888877654
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.5e-12 Score=123.53 Aligned_cols=106 Identities=19% Similarity=0.219 Sum_probs=91.2
Q ss_pred CcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecC
Q 005177 127 LISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAG 206 (710)
Q Consensus 127 L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 206 (710)
-+.+++++|+++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 378999999996 6777664 8999999999999998899999999999999999999987666789999999999999
Q ss_pred CcCCCCCcccccccccccccccccccccc
Q 005177 207 NLLNDQIPAELGMLKTVTHMEIGYNFYQG 235 (710)
Q Consensus 207 N~l~~~~p~~l~~l~~L~~L~l~~n~~~g 235 (710)
|++++..+..+..+++|++|++++|.+..
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccc
Confidence 99986655568888888888888887664
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.31 E-value=5.5e-12 Score=133.76 Aligned_cols=89 Identities=19% Similarity=0.155 Sum_probs=43.2
Q ss_pred ccCCCCCcEEECcC-CCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCC
Q 005177 121 IFNLTSLISLDISR-NNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSL 199 (710)
Q Consensus 121 ~~~l~~L~~L~Ls~-N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L 199 (710)
+..+++|++|+|++ |.|++..|..|++|++|++|+|++|+|++..|..|.+|++|++|+|++|+|++..|..|..++ |
T Consensus 27 l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L 105 (347)
T 2ifg_A 27 LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-L 105 (347)
T ss_dssp SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-C
T ss_pred CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-c
Confidence 44444444444443 444444444444555555555555555544444455555555555555555543333333333 5
Q ss_pred CeEEecCCcCC
Q 005177 200 EFLHLAGNLLN 210 (710)
Q Consensus 200 ~~L~L~~N~l~ 210 (710)
+.|+|.+|.+.
T Consensus 106 ~~l~l~~N~~~ 116 (347)
T 2ifg_A 106 QELVLSGNPLH 116 (347)
T ss_dssp CEEECCSSCCC
T ss_pred eEEEeeCCCcc
Confidence 55555555544
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.29 E-value=6.7e-12 Score=133.05 Aligned_cols=109 Identities=18% Similarity=0.208 Sum_probs=92.4
Q ss_pred ceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCC-CcCcccCCccccCCCCCcEEECcCCCCCCCC
Q 005177 63 CSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSH-NSFSGQFPVEIFNLTSLISLDISRNNFSGHF 141 (710)
Q Consensus 63 C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 141 (710)
|.|..|.|... +++.+ +|. +.. +++|+.|+|++ |.|++..|..|.++++|++|+|++|+|++..
T Consensus 8 C~~~~v~~~~~-----------n~l~~-ip~-l~~--~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 72 (347)
T 2ifg_A 8 HGSSGLRCTRD-----------GALDS-LHH-LPG--AENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVA 72 (347)
T ss_dssp SSSSCEECCSS-----------CCCTT-TTT-SCS--CSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEEC
T ss_pred ccCCEEEcCCC-----------CCCCc-cCC-CCC--CCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeC
Confidence 88887877641 13443 666 666 88999999996 9999888888999999999999999999999
Q ss_pred ChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCC
Q 005177 142 PGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSG 187 (710)
Q Consensus 142 p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~ 187 (710)
|..|.+|++|++|||++|+|++..|..+..++ |++|+|++|.+..
T Consensus 73 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 73 PDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp TTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred HHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 99999999999999999999976666666666 9999999999875
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.22 E-value=1.8e-13 Score=146.39 Aligned_cols=187 Identities=14% Similarity=0.122 Sum_probs=115.2
Q ss_pred CCCCcEEECCCCcCcccCCccccC-----CCCCcEEECcCCCCCCCCChhh-cCCCCCCEEECCCCCCCcCCchhc----
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFN-----LTSLISLDISRNNFSGHFPGGI-QSLRNLLVLDAFSNSFSGSVPAEI---- 169 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~~~p~~l-~~L~~L~~L~L~~N~l~~~~p~~~---- 169 (710)
++.|+.|+|++|.++......+.. .++|++|+|++|.++......+ ..+++|+.|+|++|.++......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 568999999999987544444332 3689999999998875433333 346788999999998875433333
Q ss_pred -cCCCCCCEEEccCCCCCC----CCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCC
Q 005177 170 -SQLEHLKVLNLAGSYFSG----PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNM 244 (710)
Q Consensus 170 -~~L~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l 244 (710)
...++|++|+|++|.++. .++..+..+++|++|+|++|.++..-.. .++..+...
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~--------------------~L~~~L~~~ 210 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLE--------------------LLAAQLDRN 210 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHH--------------------HHHHHGGGC
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHH--------------------HHHHHHhcC
Confidence 346788888888888864 2344456677888888888876532100 112233444
Q ss_pred CccchhccccccCCcc----CchhccCCCCCcEEEccccccCCCCCccccCC---C--CCCEEE--ccCCCCC
Q 005177 245 SEVQYLDIAGANLSGS----IPKELSNLTKLESLFLFRNQLAGQVPWEFSRV---T--TLKSLD--LSDNRLS 306 (710)
Q Consensus 245 ~~L~~L~ls~n~l~g~----~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l---~--~L~~L~--Ls~N~l~ 306 (710)
++|+.|+|++|.++.. ++..+...++|++|+|++|.++......+..+ . .|+.+. +..|.++
T Consensus 211 ~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 211 RQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp SCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred CCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 5677777777776532 33444556778888888888765333333222 1 155665 5555544
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.13 E-value=1e-12 Score=140.38 Aligned_cols=167 Identities=16% Similarity=0.088 Sum_probs=113.6
Q ss_pred CCCCcEEECcCCCCCCCCChhhcC-----CCCCCEEECCCCCCCcCCchhc-cCCCCCCEEEccCCCCCCCCCccc----
Q 005177 124 LTSLISLDISRNNFSGHFPGGIQS-----LRNLLVLDAFSNSFSGSVPAEI-SQLEHLKVLNLAGSYFSGPIPSQF---- 193 (710)
Q Consensus 124 l~~L~~L~Ls~N~l~~~~p~~l~~-----L~~L~~L~L~~N~l~~~~p~~~-~~L~~L~~L~L~~n~l~~~~p~~~---- 193 (710)
++.|++|+|++|.++......+.. .++|+.|||++|.++......+ ..+++|+.|+|++|.++..-...+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 467899999999987654444433 2689999999998875333222 345678888888888864332333
Q ss_pred -CCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCcc----CchhccCC
Q 005177 194 -GSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS----IPKELSNL 268 (710)
Q Consensus 194 -~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~----~p~~l~~l 268 (710)
...++|+.|+|++|.++..-.. .++..+...++|++|+|++|.++.. ++..+...
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~--------------------~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~ 210 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVA--------------------VLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRN 210 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHH--------------------HHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGC
T ss_pred HhcCCccceeeCCCCCCChHHHH--------------------HHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcC
Confidence 2456788888888776531100 1222344566777888888877642 35567778
Q ss_pred CCCcEEEccccccCCC----CCccccCCCCCCEEEccCCCCCCCCC
Q 005177 269 TKLESLFLFRNQLAGQ----VPWEFSRVTTLKSLDLSDNRLSGPIP 310 (710)
Q Consensus 269 ~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p 310 (710)
++|+.|+|++|.++.. ++..+...++|++|+|++|.++..-.
T Consensus 211 ~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~ 256 (372)
T 3un9_A 211 RQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGR 256 (372)
T ss_dssp SCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHH
T ss_pred CCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHH
Confidence 8999999999999753 23345567899999999999876433
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=1.5e-10 Score=117.49 Aligned_cols=137 Identities=17% Similarity=0.042 Sum_probs=106.0
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccc-hhHHHHHHHHHHHhccC-CCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA-TRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
.....+.|+.+.||++... |..+++|...... .....+.+|++.++.++ |..+.++++++.+.+..|+||||++|.+
T Consensus 18 ~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~ 96 (263)
T 3tm0_A 18 CVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVL 96 (263)
T ss_dssp EEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEE
T ss_pred eEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCee
Confidence 4456677778889999854 6789999987532 22345788889888875 6778889999988889999999999999
Q ss_pred hhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCC------------------------------------------------
Q 005177 528 LSEKIRTKRDWAAKYKIVLGVARGLCFLHHDC------------------------------------------------ 559 (710)
Q Consensus 528 L~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~------------------------------------------------ 559 (710)
+.+.... ......++.+++++++.||+..
T Consensus 97 l~~~~~~---~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 173 (263)
T 3tm0_A 97 CSEEYED---EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDF 173 (263)
T ss_dssp HHHHCCT---TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHH
T ss_pred hhhccCC---cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHH
Confidence 8876421 1234578889999999999810
Q ss_pred --------CCCceecCCCCCCeEecCCCceEEcccCccc
Q 005177 560 --------YPAIPHGDLKASNIVFDENMEPHLAEFGFKY 590 (710)
Q Consensus 560 --------~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~ 590 (710)
.+.++|+|+++.||+++++..+.|.||+.+.
T Consensus 174 l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 174 LKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1458999999999999876566799998653
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.10 E-value=2.5e-10 Score=115.44 Aligned_cols=129 Identities=16% Similarity=0.106 Sum_probs=98.1
Q ss_pred cCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCc--eeEEEEEEcCCceeEEEeecCCCChhhhh
Q 005177 455 ARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNL--IRLLGFCYNRHQAYLLYDYLPNGNLSEKI 532 (710)
Q Consensus 455 g~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~ni--v~l~g~~~~~~~~~lv~Ey~~~gsL~~~l 532 (710)
+.|..+.||++...+|..++||..... ....+.+|++.++.+++.++ .+++++...++..++||||++|.++. .
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~ 104 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--S 104 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--T
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--c
Confidence 345568999998888888999997654 23457788888888865554 45888888888899999999998884 2
Q ss_pred hcCCCHHHHHHHHHHHHHHHHHHhcCC-----------------------------------------------------
Q 005177 533 RTKRDWAAKYKIVLGVARGLCFLHHDC----------------------------------------------------- 559 (710)
Q Consensus 533 ~~~~~~~~~~~i~~~ia~gL~yLH~~~----------------------------------------------------- 559 (710)
. ..+ +..++.++++.+..||+..
T Consensus 105 ~-~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 180 (264)
T 1nd4_A 105 S-HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPD 180 (264)
T ss_dssp S-CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCS
T ss_pred C-cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCC
Confidence 2 122 3367788888888888742
Q ss_pred --CCCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 560 --YPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 560 --~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
.+.++|+|++|.||+++++..+.|.|||.+..
T Consensus 181 ~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 181 GEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp SCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred CCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998876677999997643
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.09 E-value=3.4e-09 Score=114.27 Aligned_cols=284 Identities=13% Similarity=0.017 Sum_probs=141.4
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCch------------
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPA------------ 167 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~------------ 167 (710)
.++|+.+.|..+ ++..-..+|.++++|+.++|..+ ++..-...|.++++|+.+.+..+ +...-..
T Consensus 70 c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~~~~~ 146 (394)
T 4fs7_A 70 CRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFKEITI 146 (394)
T ss_dssp CTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCSEEEC
T ss_pred CCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeeccccccccc
Confidence 467888888644 55444556778888888888654 55444556777777777666543 2212222
Q ss_pred ----------hccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccC
Q 005177 168 ----------EISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNI 237 (710)
Q Consensus 168 ----------~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~ 237 (710)
.|.++++|+.+.+.++. ...-...|.++.+|+.+.+..| +...-...+.....|+.+.+..+... +
T Consensus 147 ~~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i 222 (394)
T 4fs7_A 147 PEGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--L 222 (394)
T ss_dssp CTTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--E
T ss_pred CccccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--e
Confidence 34444455555444332 1122334444445554444433 22222223333444444433322111 0
Q ss_pred CccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCC
Q 005177 238 PWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLK 317 (710)
Q Consensus 238 p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 317 (710)
.......++|+.+.+..+ ++..-...+..+..|+.+.+..+... .....|..+..++.+....+.+ ....|..+.
T Consensus 223 ~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~ 297 (394)
T 4fs7_A 223 GDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCS 297 (394)
T ss_dssp CTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE---CTTTTTTCT
T ss_pred ehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceee---ccccccccc
Confidence 011111223333333211 11111223445556666665544321 2233455555566555544332 123466667
Q ss_pred CCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecc
Q 005177 318 NLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILF 397 (710)
Q Consensus 318 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~ 397 (710)
+|+.+.+..+ ++..-...|..+.+|+.+++.++ ++..-...+.+|.+|+.+++..| ++.--...|.++.+|+.+.+.
T Consensus 298 ~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp 374 (394)
T 4fs7_A 298 SLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELP 374 (394)
T ss_dssp TCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEE
T ss_pred cccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEEC
Confidence 7777777544 44333455667777777777543 44333456667777777777655 442223355566777777665
Q ss_pred c
Q 005177 398 S 398 (710)
Q Consensus 398 ~ 398 (710)
.
T Consensus 375 ~ 375 (394)
T 4fs7_A 375 K 375 (394)
T ss_dssp G
T ss_pred C
Confidence 4
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.01 E-value=1.4e-08 Score=109.46 Aligned_cols=280 Identities=13% Similarity=0.007 Sum_probs=191.5
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCC---------------------CCCCCChhhcCCCCCCEEECCC
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNN---------------------FSGHFPGGIQSLRNLLVLDAFS 158 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~---------------------l~~~~p~~l~~L~~L~~L~L~~ 158 (710)
+++|+.++|..+ ++..-...|.++++|+.+.+..+- ........|.++++|+.+.+..
T Consensus 93 c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~~~~~~~~~~~~i~~~aF~~c~~L~~i~l~~ 171 (394)
T 4fs7_A 93 CSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFKEITIPEGVTVIGDEAFATCESLEYVSLPD 171 (394)
T ss_dssp CTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCCSEEECCTTCCEECTTTTTTCTTCCEEECCT
T ss_pred CCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceeeecccccccccCccccccchhhhcccCCCcEEecCC
Confidence 678999999865 443334567778888777665431 1112234578899999999976
Q ss_pred CCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCC
Q 005177 159 NSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIP 238 (710)
Q Consensus 159 N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p 238 (710)
+. ...-...|.++.+|+.+++..| ++..-...|.++..|+.+.+..+.. .+........+|+.+.+..+. ..--.
T Consensus 172 ~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~--~i~~~~~~~~~l~~i~ip~~~-~~i~~ 246 (394)
T 4fs7_A 172 SM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLY--YLGDFALSKTGVKNIIIPDSF-TELGK 246 (394)
T ss_dssp TC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCC--EECTTTTTTCCCCEEEECTTC-CEECS
T ss_pred cc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCce--EeehhhcccCCCceEEECCCc-eeccc
Confidence 54 3344667889999999999876 5545566788999999988876543 222333344566666554321 11112
Q ss_pred ccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCC
Q 005177 239 WQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKN 318 (710)
Q Consensus 239 ~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 318 (710)
..+..+..|+.+.+..+... .....+..+..++.+....+.+. ...|..+.+|+.+.+..+ +...-...|.++++
T Consensus 247 ~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~ 321 (394)
T 4fs7_A 247 SVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTS 321 (394)
T ss_dssp STTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTT
T ss_pred ccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCC
Confidence 34566778888887766433 44556778888998887766432 345778899999999765 55444567999999
Q ss_pred CCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeE
Q 005177 319 LRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKL 394 (710)
Q Consensus 319 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l 394 (710)
|+.+++..+ ++..-...|.++.+|+.+.+..| ++..-...+.+|.+|+.+++..+- + .+...+.++++|+.+
T Consensus 322 L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~~-~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 322 LVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKRL-E-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp CCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGGG-G-GGGGGBCTTCEEEEE
T ss_pred CCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCCC-E-EhhheecCCCCCcEE
Confidence 999999754 65445678889999999999876 654445678899999999997552 2 345567777777654
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.3e-09 Score=116.02 Aligned_cols=141 Identities=15% Similarity=0.214 Sum_probs=106.7
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEee--ccc--hhHHHHHHHHHHHhccC--CCCceeEEEEEEcC---CceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIE--WGA--TRIKIVSEFITRIGTVR--HKNLIRLLGFCYNR---HQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~--~~~--~~~~~~~~e~~~l~~l~--H~niv~l~g~~~~~---~~~~lv~ 520 (710)
..+.++.|.++.+|+....+ ..+++|+.. .+. .....+.+|.++++.++ +..+.++++++.+. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 34567889999999998765 568888876 432 12446778888888887 45678899998776 4589999
Q ss_pred eecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCC-----------------------------------------
Q 005177 521 DYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDC----------------------------------------- 559 (710)
Q Consensus 521 Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~----------------------------------------- 559 (710)
||+++..+.+.....++..++..++.++++.|+.||+..
T Consensus 121 e~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (359)
T 3dxp_A 121 EFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSL 200 (359)
T ss_dssp ECCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHH
T ss_pred EecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHH
Confidence 999998886544445678888899999999999999731
Q ss_pred --------------CCCceecCCCCCCeEecCCCc--eEEcccCcccc
Q 005177 560 --------------YPAIPHGDLKASNIVFDENME--PHLAEFGFKYL 591 (710)
Q Consensus 560 --------------~~~iiHrDlk~~NiLl~~~~~--~kl~DfGla~~ 591 (710)
.+.++|+|+++.||+++.++. +.|.||+.+..
T Consensus 201 ~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 201 MDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 246999999999999997753 68999998754
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.92 E-value=7.8e-12 Score=125.93 Aligned_cols=141 Identities=21% Similarity=0.224 Sum_probs=82.5
Q ss_pred CceeeeeeeCCCCCcEEEEEcCC---CCCcccCCcch-hhh-------cCCCCcEEECCCCcCcccCCccccCCCCCcE-
Q 005177 62 ACSWSGVKCNKNNTIVVGINLSM---KGLSGALPGKP-LRI-------FFNELVDLNLSHNSFSGQFPVEIFNLTSLIS- 129 (710)
Q Consensus 62 ~C~w~gv~C~~~~~~v~~l~l~~---~~l~g~~~~~~-~~~-------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~- 129 (710)
.|.|.|+.|+..+.+|+.+...+ ..+.|.++++. ..+ .-..-+.|||+. +...+.|+.
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~----------l~~dp~L~~~ 146 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKG----------LRSDPDLVAQ 146 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHHHHHHTEETTTTEEECTT----------GGGCHHHHHT
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHHHHHhccchhccccCHHH----------cCCCcchhhc
Confidence 58999999997555554443333 23445555431 110 011233455443 333344444
Q ss_pred -EECcCCCCC---CCCChhhcCCCCCCEEECCCCCCCc--CCchhccCCCCCCEEEccCCCCCCCCCcccCCCC--CCCe
Q 005177 130 -LDISRNNFS---GHFPGGIQSLRNLLVLDAFSNSFSG--SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFK--SLEF 201 (710)
Q Consensus 130 -L~Ls~N~l~---~~~p~~l~~L~~L~~L~L~~N~l~~--~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~--~L~~ 201 (710)
++++.|... +.++....++++|+.|+|++|++++ .+|..+..+++|+.|+|++|++++. ..+..+. +|+.
T Consensus 147 ~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~ 224 (267)
T 3rw6_A 147 NIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEE 224 (267)
T ss_dssp TCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSE
T ss_pred CccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcce
Confidence 566666422 2222222467788888888888877 4566777788888888888888754 3344444 7788
Q ss_pred EEecCCcCCCCCc
Q 005177 202 LHLAGNLLNDQIP 214 (710)
Q Consensus 202 L~L~~N~l~~~~p 214 (710)
|+|++|.+.+.+|
T Consensus 225 L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 225 LWLDGNSLCDTFR 237 (267)
T ss_dssp EECTTSTTGGGCS
T ss_pred EEccCCcCccccC
Confidence 8888887776555
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=98.86 E-value=7.3e-08 Score=103.74 Aligned_cols=287 Identities=12% Similarity=0.103 Sum_probs=149.5
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCcEEECcCCC---CCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEE
Q 005177 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNN---FSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 178 (710)
Q Consensus 102 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~---l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L 178 (710)
.|+.+.+..+ ++..-..+|.++++|+.+.++.|. ++..-...|.++.+|+.+.+..+ ++..-...|.++.+|+.+
T Consensus 65 ~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i 142 (394)
T 4gt6_A 65 VLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTV 142 (394)
T ss_dssp CCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEE
T ss_pred cCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccc
Confidence 4777777654 554445677888888888887664 55444556777778877776544 343445567777888888
Q ss_pred EccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccc---
Q 005177 179 NLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGA--- 255 (710)
Q Consensus 179 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n--- 255 (710)
.+..+ +...-...|.++.+|+.+.+..+ +. .+......-..|+.+.+..+... .-...+.++.++.......+
T Consensus 143 ~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~-~I~~~aF~~~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~ 218 (394)
T 4gt6_A 143 TIPEG-VTSVADGMFSYCYSLHTVTLPDS-VT-AIEERAFTGTALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYP 218 (394)
T ss_dssp ECCTT-CCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCCCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSC
T ss_pred cccce-eeeecccceecccccccccccce-ee-EeccccccccceeEEEECCcccc-cccchhhhccccceecccccccc
Confidence 87643 33334456677777777777654 22 12211111233444433221100 00011122222222111111
Q ss_pred ---------------------------------cCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccC
Q 005177 256 ---------------------------------NLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSD 302 (710)
Q Consensus 256 ---------------------------------~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~ 302 (710)
.++..-...|.++++|+.+.+..+.. ..-...|.++++|+.+.+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~- 296 (394)
T 4gt6_A 219 AIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVV-SIGTGAFMNCPALQDIEFS- 296 (394)
T ss_dssp BSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCC-EECTTTTTTCTTCCEEECC-
T ss_pred cccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEecccccc-eecCcccccccccccccCC-
Confidence 11111123455666677776654332 2233456667777777775
Q ss_pred CCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCc
Q 005177 303 NRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIP 382 (710)
Q Consensus 303 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip 382 (710)
+.+...-...|.++.+|+.+++..+ ++..-...|.++.+|+.+.+..+ ++..-...+.+|++|+.+++.+|....
T Consensus 297 ~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~--- 371 (394)
T 4gt6_A 297 SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW--- 371 (394)
T ss_dssp TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---
T ss_pred CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---
Confidence 3344333456777777777777643 44333456777777777777543 443334566777777777777665331
Q ss_pred ccccCCCceeeEecccCCc
Q 005177 383 PDICSGGVLFKLILFSNNF 401 (710)
Q Consensus 383 ~~~~~~~~L~~l~l~~N~l 401 (710)
..+.....|+.+.+..|.+
T Consensus 372 ~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 372 NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp HTCBCCCCC----------
T ss_pred hhhhccCCCCEEEeCCCCE
Confidence 2344555666666655543
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.81 E-value=8.9e-10 Score=116.74 Aligned_cols=202 Identities=17% Similarity=0.212 Sum_probs=110.8
Q ss_pred CcEEEEEcCCCCCcc-cC-------CcchhhhcCCCCcEEECCCCcCc---------ccCCccccCCCCCcEEECcCCCC
Q 005177 75 TIVVGINLSMKGLSG-AL-------PGKPLRIFFNELVDLNLSHNSFS---------GQFPVEIFNLTSLISLDISRNNF 137 (710)
Q Consensus 75 ~~v~~l~l~~~~l~g-~~-------~~~~~~~~l~~L~~L~Ls~N~l~---------~~~p~~~~~l~~L~~L~Ls~N~l 137 (710)
.+|+.+.+...++.| .. ..+... +++|+.|.+..+... +.++..+..+++|+.|+|++|.-
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~--l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~ 184 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEK--FAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNN 184 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHH--HTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBT
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhh--cchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCC
Confidence 356677776655553 11 222334 788999988765431 12334455678888888887731
Q ss_pred CCCCChhhcCCCCCCEEECCCCCCCcCCchhcc--CCCCCCEEEccC--CCCCCC-----CCccc--CCCCCCCeEEecC
Q 005177 138 SGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEIS--QLEHLKVLNLAG--SYFSGP-----IPSQF--GSFKSLEFLHLAG 206 (710)
Q Consensus 138 ~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~--~L~~L~~L~L~~--n~l~~~-----~p~~~--~~l~~L~~L~L~~ 206 (710)
. .+|. + .+++|+.|+|..+.++......+. .+++|++|+|+. |...+. +...+ ..+++|++|+|.+
T Consensus 185 l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~ 261 (362)
T 2ra8_A 185 L-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVD 261 (362)
T ss_dssp C-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEES
T ss_pred c-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCC
Confidence 1 2333 3 377888888887776543333343 678888888753 221111 01112 2356677777766
Q ss_pred CcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCcc----CchhccCCCCCcEEEccccccC
Q 005177 207 NLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS----IPKELSNLTKLESLFLFRNQLA 282 (710)
Q Consensus 207 N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~----~p~~l~~l~~L~~L~L~~n~l~ 282 (710)
|.+.+..+..+.. ...+++|++|+|+.|.+++. ++..+..+++|+.|+++.|.++
T Consensus 262 ~~i~~~~~~~la~---------------------a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 262 AEEQNVVVEMFLE---------------------SDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp CTTHHHHHHHHHH---------------------CSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CCCchHHHHHHHh---------------------CccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 6654322211110 01345677777777766643 2333345677888888887765
Q ss_pred CCCCccccC-CCCCCEEEccCCC
Q 005177 283 GQVPWEFSR-VTTLKSLDLSDNR 304 (710)
Q Consensus 283 ~~~p~~~~~-l~~L~~L~Ls~N~ 304 (710)
...-..+.. + ...++++.++
T Consensus 321 d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 321 DEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHHHHHC--CSEEECCSBC
T ss_pred HHHHHHHHHHc--CCEEEecCCc
Confidence 432222222 1 3567777766
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.2e-09 Score=115.74 Aligned_cols=164 Identities=15% Similarity=0.194 Sum_probs=84.3
Q ss_pred CchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccc--cccccccccccc--ccccccCCcc
Q 005177 165 VPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG--MLKTVTHMEIGY--NFYQGNIPWQ 240 (710)
Q Consensus 165 ~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~--~l~~L~~L~l~~--n~~~g~~p~~ 240 (710)
++..+..+++|+.|+|++|.-. .+|. +. +++|+.|++..|.++......+. .+++|++|+|+. |...|.. .
T Consensus 164 L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~--~ 238 (362)
T 2ra8_A 164 LSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDG--D 238 (362)
T ss_dssp CHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCS--C
T ss_pred HHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccch--h
Confidence 4445556666777777665211 2232 32 56677777766655432222222 455555555532 1111100 0
Q ss_pred ccCCCccchhccccccCCccCchhc--cCCCCCcEEEccccccCCCCCccc---cCCCCCCEEEccCCCCCCC----CCc
Q 005177 241 LGNMSEVQYLDIAGANLSGSIPKEL--SNLTKLESLFLFRNQLAGQVPWEF---SRVTTLKSLDLSDNRLSGP----IPE 311 (710)
Q Consensus 241 l~~l~~L~~L~ls~n~l~g~~p~~l--~~l~~L~~L~L~~n~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~~----~p~ 311 (710)
+ ..+ ...+ ..+++|+.|+|++|.+....+..+ ..+++|++|+|+.|.+.+. ++.
T Consensus 239 ~---~~l--------------~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~ 301 (362)
T 2ra8_A 239 M---NVF--------------RPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLD 301 (362)
T ss_dssp G---GGT--------------GGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHT
T ss_pred H---HHH--------------HHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHh
Confidence 0 000 0111 235677777777776654322222 2456788888888877653 333
Q ss_pred cccCCCCCCEEEcccccCcccCCcccCC-CCCCcEEeccCCC
Q 005177 312 SFADLKNLRLLSLMYNEMSGTVPESLVQ-LPSLEILFIWNNY 352 (710)
Q Consensus 312 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~~-l~~L~~L~L~~N~ 352 (710)
.+..+++|+.|+|++|.++...-..+.. + ...+++++|.
T Consensus 302 ~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 302 HVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp THHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred hcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 4455678888888888776443222222 2 3457777765
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.72 E-value=6.9e-09 Score=107.59 Aligned_cols=186 Identities=13% Similarity=0.078 Sum_probs=118.9
Q ss_pred hhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccC-CCC--ceeEEEEEEcCC---ceeEEEeecC
Q 005177 451 CEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVR-HKN--LIRLLGFCYNRH---QAYLLYDYLP 524 (710)
Q Consensus 451 ~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~-H~n--iv~l~g~~~~~~---~~~lv~Ey~~ 524 (710)
.+.++.|....+|+.. ..+++|.-... .....+.+|.+.++.+. +.. +.+.+++....+ ..|+||||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 4457788888888753 45888886533 33566888999988774 333 334444443333 3589999999
Q ss_pred CCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcC----------------------------------------------
Q 005177 525 NGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHD---------------------------------------------- 558 (710)
Q Consensus 525 ~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~---------------------------------------------- 558 (710)
|.++.+.....++..++..++.++++.++.||+.
T Consensus 100 G~~l~~~~~~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 179 (304)
T 3sg8_A 100 GVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRD 179 (304)
T ss_dssp CEECCHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHH
T ss_pred CeECCccccccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHH
Confidence 9888765545567777788888888888888851
Q ss_pred ---------CCCCceecCCCCCCeEecC--CCceEEcccCccccccccCC--CCcccccccCch---hhhh-cc------
Q 005177 559 ---------CYPAIPHGDLKASNIVFDE--NMEPHLAEFGFKYLTQLADG--SFPAKIAWTESG---EFYN-AM------ 615 (710)
Q Consensus 559 ---------~~~~iiHrDlk~~NiLl~~--~~~~kl~DfGla~~~~~~~~--~~~~~~~~~~~~---e~~~-~~------ 615 (710)
..+.++|+|+++.||++++ ...+.|.||+.+..-..... ...........+ .+.. +.
T Consensus 180 ~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~ 259 (304)
T 3sg8_A 180 ILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPT 259 (304)
T ss_dssp HHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSCHHH
T ss_pred HHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCCcHH
Confidence 1245899999999999998 45678999998764321000 000000000000 0000 00
Q ss_pred ---CCccccceeeHHHHHHHHHhCCCCCC
Q 005177 616 ---KEEMYMDVYGFGEIILEILTNGRLTN 641 (710)
Q Consensus 616 ---~~~~~~DVySfGvvl~Elltg~~p~~ 641 (710)
+.....+.|++|+++|++.+|..++.
T Consensus 260 ~~~r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 260 VLEKYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 11223589999999999999976653
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=98.64 E-value=1.1e-06 Score=94.34 Aligned_cols=272 Identities=11% Similarity=0.081 Sum_probs=178.0
Q ss_pred CccccCCC-CCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCC---CCcCCchhccCCCCCCEEEccCCCCCCCCCccc
Q 005177 118 PVEIFNLT-SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS---FSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQF 193 (710)
Q Consensus 118 p~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~---l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~ 193 (710)
..+|.++. .|+.+.+..+ ++..-..+|.++++|+.+.+..|. ++..-...|.++.+|+.+.+..+ ++..-...|
T Consensus 56 ~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF 133 (394)
T 4gt6_A 56 DRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAF 133 (394)
T ss_dssp TTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTT
T ss_pred HhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhh
Confidence 34566774 5999999754 776677889999999999998774 55444667889999998887654 444455678
Q ss_pred CCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcE
Q 005177 194 GSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLES 273 (710)
Q Consensus 194 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~ 273 (710)
.++.+|+.+.+..+ +...-...+....+|+.+.+..+- . .+........+|+.+.+..+-. ..-...+..+.++..
T Consensus 134 ~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~~-~-~I~~~aF~~~~l~~i~ip~~~~-~i~~~af~~c~~l~~ 209 (394)
T 4gt6_A 134 HHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDSV-T-AIEERAFTGTALTQIHIPAKVT-RIGTNAFSECFALST 209 (394)
T ss_dssp TTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTTC-C-EECTTTTTTCCCSEEEECTTCC-EECTTTTTTCTTCCE
T ss_pred hhhcccccccccce-eeeecccceeccccccccccccee-e-EeccccccccceeEEEECCccc-ccccchhhhccccce
Confidence 89999999999754 333334556677788877765441 1 1211111224566666544321 122334555555555
Q ss_pred EEcccccc------------------------------------CCCCCccccCCCCCCEEEccCCCCCCCCCccccCCC
Q 005177 274 LFLFRNQL------------------------------------AGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLK 317 (710)
Q Consensus 274 L~L~~n~l------------------------------------~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 317 (710)
.....+.. +..-...|.++..|+.+.+..+..+ .-...|.+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~ 288 (394)
T 4gt6_A 210 ITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCP 288 (394)
T ss_dssp EEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCT
T ss_pred ecccccccccccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEecccccce-ecCccccccc
Confidence 54332211 1111234667788888888765432 3445788889
Q ss_pred CCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCc-ccccCCCceeeEec
Q 005177 318 NLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIP-PDICSGGVLFKLIL 396 (710)
Q Consensus 318 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip-~~~~~~~~L~~l~l 396 (710)
+|+.+.+. +.++..-...|..+.+|+.+++..+ ++..-...+.+|.+|+.+.+..+ ++ .|+ ..|.++.+|+.+++
T Consensus 289 ~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~ 364 (394)
T 4gt6_A 289 ALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNIEY 364 (394)
T ss_dssp TCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEE
T ss_pred ccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEE
Confidence 99999986 4555444567888999999999765 55334567888999999999654 54 343 46777889999988
Q ss_pred ccCC
Q 005177 397 FSNN 400 (710)
Q Consensus 397 ~~N~ 400 (710)
.+|.
T Consensus 365 ~~~~ 368 (394)
T 4gt6_A 365 SGSR 368 (394)
T ss_dssp SSCH
T ss_pred CCce
Confidence 7764
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.46 E-value=3.5e-08 Score=99.25 Aligned_cols=96 Identities=22% Similarity=0.293 Sum_probs=66.8
Q ss_pred EECCCCcCc---ccCCccccCCCCCcEEECcCCCCCC--CCChhhcCCCCCCEEECCCCCCCcCCchhccCCC--CCCEE
Q 005177 106 LNLSHNSFS---GQFPVEIFNLTSLISLDISRNNFSG--HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLE--HLKVL 178 (710)
Q Consensus 106 L~Ls~N~l~---~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~--~L~~L 178 (710)
++++.|... +.++....++++|++|+|++|+|++ .+|..+..+++|+.|+|++|.|++. ..+..+. +|++|
T Consensus 148 l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L 225 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEEL 225 (267)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEE
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceE
Confidence 566666432 2222223467888888888888887 5567777888888888888888864 3344444 88889
Q ss_pred EccCCCCCCCCCc-------ccCCCCCCCeEE
Q 005177 179 NLAGSYFSGPIPS-------QFGSFKSLEFLH 203 (710)
Q Consensus 179 ~L~~n~l~~~~p~-------~~~~l~~L~~L~ 203 (710)
+|++|.+++.+|. .+..+++|+.||
T Consensus 226 ~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 226 WLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp ECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred EccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 9998888876663 255677777765
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.38 E-value=3.4e-08 Score=94.34 Aligned_cols=110 Identities=15% Similarity=0.077 Sum_probs=70.7
Q ss_pred CCCCcEEECCCC-cCccc----CCccccCCCCCcEEECcCCCCCCC----CChhhcCCCCCCEEECCCCCCCcC----Cc
Q 005177 100 FNELVDLNLSHN-SFSGQ----FPVEIFNLTSLISLDISRNNFSGH----FPGGIQSLRNLLVLDAFSNSFSGS----VP 166 (710)
Q Consensus 100 l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~L~~L~~L~L~~N~l~~~----~p 166 (710)
.+.|++|+|++| .+... +...+...++|++|+|++|.+... +...+...++|++|+|++|.|+.. +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 567888888888 77532 334455677888888888887642 233345557788888888877642 34
Q ss_pred hhccCCCCCCEEEc--cCCCCCCC----CCcccCCCCCCCeEEecCCcC
Q 005177 167 AEISQLEHLKVLNL--AGSYFSGP----IPSQFGSFKSLEFLHLAGNLL 209 (710)
Q Consensus 167 ~~~~~L~~L~~L~L--~~n~l~~~----~p~~~~~l~~L~~L~L~~N~l 209 (710)
..+...++|++|+| ++|.++.. +...+...++|+.|+|++|.+
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 55666677777777 66776532 222334456677777776655
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=98.32 E-value=3.2e-05 Score=82.39 Aligned_cols=283 Identities=9% Similarity=0.028 Sum_probs=132.4
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEc
Q 005177 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L 180 (710)
.+|+.+.+..+ ++..-..+|.++++|+.++|..+ ++..-..+|.++ +|+.+.+..+ ++..-...|.. .+|+.+.+
T Consensus 46 ~~i~~v~ip~~-vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~l 120 (379)
T 4h09_A 46 DRISEVRVNSG-ITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEF 120 (379)
T ss_dssp GGCSEEEECTT-EEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEEC
T ss_pred cCCEEEEeCCC-ccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccC
Confidence 45666666542 44333446777778888877643 554445556665 5666665433 33222233333 36777776
Q ss_pred cCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccc------------cCCccccCCCccc
Q 005177 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG------------NIPWQLGNMSEVQ 248 (710)
Q Consensus 181 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g------------~~p~~l~~l~~L~ 248 (710)
..+- +..-...|.+. +|+.+.+..+ ++..-...+....+++...+..+.... .....+.....+.
T Consensus 121 p~~~-~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (379)
T 4h09_A 121 PGAT-TEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGT 197 (379)
T ss_dssp CTTC-CEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCS
T ss_pred CCcc-ccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceecccccccccc
Confidence 5442 21222233332 3444443322 121222223333344333332211100 0001111122222
Q ss_pred hhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEccccc
Q 005177 249 YLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNE 328 (710)
Q Consensus 249 ~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 328 (710)
.+.+... ........+....+|+.+.+..+ +.......|.++..|+.+.+..+ +...-...|.++.+|+.+.+..+
T Consensus 198 ~~~~~~~-~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~- 273 (379)
T 4h09_A 198 EFTIPST-VKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK- 273 (379)
T ss_dssp EEECCTT-CCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-
T ss_pred ccccccc-eeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-
Confidence 2222111 11122233444556666665433 22223344556666666666554 33333445666666777666433
Q ss_pred CcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCc-ccccCCCceeeEecc
Q 005177 329 MSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIP-PDICSGGVLFKLILF 397 (710)
Q Consensus 329 l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip-~~~~~~~~L~~l~l~ 397 (710)
+...-...|..+++|+.+.+.++.++..-+..+.++.+|+.+++..+ ++ .|+ ..|.++.+|+.+.+.
T Consensus 274 i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 274 VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCCCCCC
T ss_pred ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCCCCCEEEEC
Confidence 33333345666677777777666665333455666677777776543 33 233 345555666666553
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=4.7e-06 Score=86.17 Aligned_cols=137 Identities=13% Similarity=0.061 Sum_probs=92.1
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCC---CceeEEEEEE-cCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHK---NLIRLLGFCY-NRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~---niv~l~g~~~-~~~~~~lv~Ey~~~ 525 (710)
..+.++.|....+|+. |..++||.-. .......+.+|.+.|..+++. .+.+.++++. ..+..++||||++|
T Consensus 23 ~v~~l~~G~~n~v~~v----g~~~VlR~~~-~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 23 SVESLGEGFRNYAILV----NGDWVFRFPK-SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp CEEEEEECSSEEEEEE----TTTEEEEEES-SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeeecCCCcceeEEEE----CCEEEEEecC-CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 3445677777788887 5668888853 223356788999999988753 2456677764 44567899999999
Q ss_pred CChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcC-----------------------------------------------
Q 005177 526 GNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHD----------------------------------------------- 558 (710)
Q Consensus 526 gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~----------------------------------------------- 558 (710)
..+.+.....++..++..++.++++.|+.||+.
T Consensus 98 ~~l~~~~~~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~ 177 (306)
T 3tdw_A 98 QILGEDGMAVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQ 177 (306)
T ss_dssp EECHHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHH
T ss_pred eECchhhhhhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHH
Confidence 887764322334444444444555544444432
Q ss_pred ----------CCCCceecCCCCCCeEecC---CCc-eEEcccCcccc
Q 005177 559 ----------CYPAIPHGDLKASNIVFDE---NME-PHLAEFGFKYL 591 (710)
Q Consensus 559 ----------~~~~iiHrDlk~~NiLl~~---~~~-~kl~DfGla~~ 591 (710)
..+.++|+|+++.||+++. ++. ..|.||+.+..
T Consensus 178 ~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 178 SYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2235799999999999997 455 48999997654
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.24 E-value=1.4e-07 Score=90.00 Aligned_cols=116 Identities=14% Similarity=0.135 Sum_probs=80.4
Q ss_pred CccccCCCCCcEEECcCC-CCCCC----CChhhcCCCCCCEEECCCCCCCcC----CchhccCCCCCCEEEccCCCCCCC
Q 005177 118 PVEIFNLTSLISLDISRN-NFSGH----FPGGIQSLRNLLVLDAFSNSFSGS----VPAEISQLEHLKVLNLAGSYFSGP 188 (710)
Q Consensus 118 p~~~~~l~~L~~L~Ls~N-~l~~~----~p~~l~~L~~L~~L~L~~N~l~~~----~p~~~~~L~~L~~L~L~~n~l~~~ 188 (710)
...+...++|++|+|++| .+... +...+...++|++|+|++|.+... +...+...++|++|+|++|.++..
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~ 108 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGS 108 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHH
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHH
Confidence 345667899999999999 88642 344566778999999999998742 345566678899999999998743
Q ss_pred ----CCcccCCCCCCCeEEe--cCCcCCCCC----cccccccccccccccccccc
Q 005177 189 ----IPSQFGSFKSLEFLHL--AGNLLNDQI----PAELGMLKTVTHMEIGYNFY 233 (710)
Q Consensus 189 ----~p~~~~~l~~L~~L~L--~~N~l~~~~----p~~l~~l~~L~~L~l~~n~~ 233 (710)
+...+...++|++|+| ++|.+...- ...+...++|++|++++|.+
T Consensus 109 g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 109 GILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 3456677788999999 778876432 22223334455555554443
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=98.19 E-value=9e-05 Score=78.87 Aligned_cols=264 Identities=10% Similarity=0.021 Sum_probs=161.0
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
..+|+.++|..+ ++..-..+|.++ +|+.+.+..+ ++..-...|.+ .+|+.+++..+- +..-...|.+. +|+.+.
T Consensus 68 C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~lp~~~-~~i~~~~F~~~-~l~~~~ 141 (379)
T 4h09_A 68 CYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEFPGAT-TEIGNYIFYNS-SVKRIV 141 (379)
T ss_dssp CTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEECCTTC-CEECTTTTTTC-CCCEEE
T ss_pred CCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccCCCcc-ccccccccccc-eeeeee
Confidence 678999999755 553444566666 6888877644 44333445554 489999987653 32223344444 566666
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCCcCCCC------------CcccccccccccccccccccccccCCccccCCCcc
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQ------------IPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEV 247 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~------------~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L 247 (710)
+-.+ ++..-...|.++.+++...+..+..... ....+.....+..+.+..+ ........+....+|
T Consensus 142 ~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~f~~~~~l 219 (379)
T 4h09_A 142 IPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPST-VKTVTAYGFSYGKNL 219 (379)
T ss_dssp ECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTT-CCEECTTTTTTCSSC
T ss_pred ccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccc-eeEEeeccccccccc
Confidence 5543 4434455677888888887765543211 1111222222222222111 111112234455566
Q ss_pred chhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccc
Q 005177 248 QYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYN 327 (710)
Q Consensus 248 ~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 327 (710)
+.+.+..+ +.......+.++..|+.+.+..+ ++..-...|.++.+|+.+.+..+ +...-...|.++++|+.+.+.++
T Consensus 220 ~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~ 296 (379)
T 4h09_A 220 KKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNS 296 (379)
T ss_dssp SEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCT
T ss_pred ceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccccccccccc
Confidence 66665443 33333455777888888888665 44444566778888999888654 44344567888899999999888
Q ss_pred cCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCC
Q 005177 328 EMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTN 375 (710)
Q Consensus 328 ~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N 375 (710)
.++..-...|.++.+|+.+.|..+ ++..-...+.+|++|+.+.+..+
T Consensus 297 ~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 297 AIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp TCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred ccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 887655678888899999998754 54333457788888888877544
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=1.5e-05 Score=80.51 Aligned_cols=133 Identities=19% Similarity=0.116 Sum_probs=90.4
Q ss_pred hcCCCCC-ccEEEEcC-CCcEEEEEEeeccchhHHHHHHHHHHHhccC-CCCceeEEEEEEcCCceeEEEeecCCCChhh
Q 005177 454 AARPQSA-AGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPNGNLSE 530 (710)
Q Consensus 454 ig~g~~g-~vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~~ 530 (710)
+..|..+ .||+.... ++..+.||+-..+ ....+.+|.+.|+.+. +--+-++++++.+.+..++||||+++.++.+
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~ 109 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQ 109 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHH
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccc
Confidence 4446555 58988764 5667889987643 3456778888887664 2235578899988899999999999877765
Q ss_pred hhhcCCCHHHHHHHHHHHHHHHHHHhcCC---------------------------------------------------
Q 005177 531 KIRTKRDWAAKYKIVLGVARGLCFLHHDC--------------------------------------------------- 559 (710)
Q Consensus 531 ~l~~~~~~~~~~~i~~~ia~gL~yLH~~~--------------------------------------------------- 559 (710)
..... ...+..++.++++.|+-||...
T Consensus 110 ~~~~~--~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 187 (272)
T 4gkh_A 110 VLEEY--PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLL 187 (272)
T ss_dssp HHHHC--GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTC
T ss_pred cccCC--HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcc
Confidence 44321 1122334444555555555321
Q ss_pred ----CCCceecCCCCCCeEecCCCceEEcccCccc
Q 005177 560 ----YPAIPHGDLKASNIVFDENMEPHLAEFGFKY 590 (710)
Q Consensus 560 ----~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~ 590 (710)
.+.++|+|+.+.||+++.++.+-|.||+.+.
T Consensus 188 ~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 188 PFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp CCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1247899999999999987777799998764
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=97.86 E-value=1.8e-05 Score=83.57 Aligned_cols=79 Identities=9% Similarity=-0.010 Sum_probs=53.6
Q ss_pred hhh-cCCCCCccEEEEcC-------CCcEEEEEEeeccc---h-hHHHHHHHHHHHhccCC---CCceeEEEEEEcC---
Q 005177 452 EEA-ARPQSAAGCKAVLP-------TGITVSVKKIEWGA---T-RIKIVSEFITRIGTVRH---KNLIRLLGFCYNR--- 513 (710)
Q Consensus 452 ~~i-g~g~~g~vy~~~~~-------~g~~vAvK~l~~~~---~-~~~~~~~e~~~l~~l~H---~niv~l~g~~~~~--- 513 (710)
+.+ +.|....+|+.... +|..+++|.-.... . ....+.+|.+.++.++. -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 445 67778889988754 26778888865432 1 12456778888777653 2466788887665
Q ss_pred CceeEEEeecCCCChhh
Q 005177 514 HQAYLLYDYLPNGNLSE 530 (710)
Q Consensus 514 ~~~~lv~Ey~~~gsL~~ 530 (710)
+..++||||++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 35689999999876653
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00017 Score=75.27 Aligned_cols=135 Identities=17% Similarity=0.194 Sum_probs=77.7
Q ss_pred hhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhcc-----CCCCceeEE-E--EEEcCCceeEEEeec
Q 005177 452 EEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTV-----RHKNLIRLL-G--FCYNRHQAYLLYDYL 523 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l-----~H~niv~l~-g--~~~~~~~~~lv~Ey~ 523 (710)
..++.|....+|+....+|. +++|+..... .....|.+++..+ ..|.++... | +....+..++||||+
T Consensus 38 ~~l~gG~~n~~~~v~~~~~~-~vlk~~~~~~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSGA-VCLKRIHRPE---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp EECC----CEEEEEEETTEE-EEEEEECSCH---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eeccccccCcEEEEEeCCCC-EEEEecCCCH---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 34555668899998876554 8899987532 2223344444333 234444311 1 122356789999999
Q ss_pred CCCChh--------------hhhhc-------C---------CCHHHHH-------------------------------
Q 005177 524 PNGNLS--------------EKIRT-------K---------RDWAAKY------------------------------- 542 (710)
Q Consensus 524 ~~gsL~--------------~~l~~-------~---------~~~~~~~------------------------------- 542 (710)
+|..+. ..+|. . ..|....
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 986542 11221 0 1343211
Q ss_pred HHHHHHHHHHHHHhc----------CCCCCceecCCCCCCeEecCCCceEEcccCccc
Q 005177 543 KIVLGVARGLCFLHH----------DCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 590 (710)
Q Consensus 543 ~i~~~ia~gL~yLH~----------~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~ 590 (710)
.+...+.+++++|+. ...+.++|+|+++.||+++.++.+.|.||+.+.
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 011123446667763 123589999999999999878889999999653
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00034 Score=72.07 Aligned_cols=134 Identities=16% Similarity=0.147 Sum_probs=90.9
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccC---CCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVR---HKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~---H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.++.|....+|+... ++..++||.-... ....+..|.+.|+.+. ...+.+.++++...+..++||||+++.
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 456678888999999886 4667888887643 3556788888877764 356778889888888899999999987
Q ss_pred Chhh-----------hhhc--C----------------------CCHHHHH---HHHH--H--------------HHHH-
Q 005177 527 NLSE-----------KIRT--K----------------------RDWAAKY---KIVL--G--------------VARG- 551 (710)
Q Consensus 527 sL~~-----------~l~~--~----------------------~~~~~~~---~i~~--~--------------ia~g- 551 (710)
.+.. .||. . .+|..-. ++.. + +.+.
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 6521 1221 0 1464321 1111 1 1111
Q ss_pred HHHHh-cCCCCCceecCCCCCCeEecCCCceEEcccC
Q 005177 552 LCFLH-HDCYPAIPHGDLKASNIVFDENMEPHLAEFG 587 (710)
Q Consensus 552 L~yLH-~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG 587 (710)
...|. ....|.++|+|+.+.|++++.++ +.|.|+.
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 23343 22357899999999999999887 8899974
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00016 Score=77.53 Aligned_cols=74 Identities=12% Similarity=0.003 Sum_probs=48.2
Q ss_pred hhhhcCCCCCccEEEEcC-CCcEEEEEEeeccc--------hhHHHHHHHHHHHhccCC--CCce-eEEEEEEcCCceeE
Q 005177 451 CEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA--------TRIKIVSEFITRIGTVRH--KNLI-RLLGFCYNRHQAYL 518 (710)
Q Consensus 451 ~~~ig~g~~g~vy~~~~~-~g~~vAvK~l~~~~--------~~~~~~~~e~~~l~~l~H--~niv-~l~g~~~~~~~~~l 518 (710)
.+.+|.|..+.||++... ++..++||...... .....+..|.+.+..+.. |..+ +++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 457899999999999764 56789999764321 123445677887776642 4444 45543 3456789
Q ss_pred EEeecCCC
Q 005177 519 LYDYLPNG 526 (710)
Q Consensus 519 v~Ey~~~g 526 (710)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999863
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.44 E-value=3e-05 Score=72.27 Aligned_cols=34 Identities=3% Similarity=0.023 Sum_probs=16.6
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCcEEECcCC
Q 005177 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRN 135 (710)
Q Consensus 102 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 135 (710)
.|+.|||+++.++..--..+..+++|++|+|++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 3555555555554332223444555555555554
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.41 E-value=5.4e-05 Score=70.52 Aligned_cols=91 Identities=11% Similarity=0.135 Sum_probs=66.0
Q ss_pred CccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCC-CCcCCchhccCC----CCCCEEEccCCC-CCCCCCc
Q 005177 118 PVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS-FSGSVPAEISQL----EHLKVLNLAGSY-FSGPIPS 191 (710)
Q Consensus 118 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~-l~~~~p~~~~~L----~~L~~L~L~~n~-l~~~~p~ 191 (710)
|.....-.+|+.|||+++.++..--..+.++++|+.|+|+++. ++..--..++.+ ++|++|+|+++. ++..-=.
T Consensus 54 P~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~ 133 (176)
T 3e4g_A 54 PTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGII 133 (176)
T ss_dssp CCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHH
T ss_pred CcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHH
Confidence 4433334579999999999876655667889999999999985 664333445554 379999999974 6643223
Q ss_pred ccCCCCCCCeEEecCCc
Q 005177 192 QFGSFKSLEFLHLAGNL 208 (710)
Q Consensus 192 ~~~~l~~L~~L~L~~N~ 208 (710)
.+..+++|+.|+++++.
T Consensus 134 ~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 134 ALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HGGGCTTCCEEEEESCT
T ss_pred HHhcCCCCCEEECCCCC
Confidence 46778999999999875
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00096 Score=72.00 Aligned_cols=73 Identities=15% Similarity=0.094 Sum_probs=44.4
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEee-------cc-ch--hHHHHHHHHHHH-hccCCCCceeEEEEEEcCCceeE
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIE-------WG-AT--RIKIVSEFITRI-GTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~-------~~-~~--~~~~~~~e~~~l-~~l~H~niv~l~g~~~~~~~~~l 518 (710)
..+.+|.|....||++.. ++..++||... .. .. ....+..|+..+ ....+..+.+++++. .+..++
T Consensus 38 ~i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~l 114 (420)
T 2pyw_A 38 VIKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALI 114 (420)
T ss_dssp EEEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEE
T ss_pred EEEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEE
Confidence 355678898999999975 56789999321 11 10 222333343322 222334566676665 567799
Q ss_pred EEeec-CC
Q 005177 519 LYDYL-PN 525 (710)
Q Consensus 519 v~Ey~-~~ 525 (710)
||||+ ++
T Consensus 115 v~e~l~~g 122 (420)
T 2pyw_A 115 GMRYLEPP 122 (420)
T ss_dssp EECCCCTT
T ss_pred EEeecCCc
Confidence 99999 76
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00077 Score=68.65 Aligned_cols=75 Identities=11% Similarity=0.085 Sum_probs=53.3
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccch-hHHHHHHHHHHHhccCCC---CceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHK---NLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~---niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.+|.|..+.||+..+.+|+.|.||+-..... ....|..|.+.|+.+.-- -+.+.+++ +.-++||||++.
T Consensus 19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l~~ 94 (288)
T 3f7w_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECCCC
T ss_pred EEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEeecc
Confidence 4566788999999999999999999998764322 234678888887766421 23444443 234799999987
Q ss_pred CCh
Q 005177 526 GNL 528 (710)
Q Consensus 526 gsL 528 (710)
+..
T Consensus 95 ~~~ 97 (288)
T 3f7w_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred cCC
Confidence 654
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=96.54 E-value=0.011 Score=61.22 Aligned_cols=32 Identities=19% Similarity=0.216 Sum_probs=27.0
Q ss_pred CCCceecCCCCCCeEecCC----CceEEcccCcccc
Q 005177 560 YPAIPHGDLKASNIVFDEN----MEPHLAEFGFKYL 591 (710)
Q Consensus 560 ~~~iiHrDlk~~NiLl~~~----~~~kl~DfGla~~ 591 (710)
.+.++|+|+.+.||+++.+ ..+.|.||+.+..
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 3479999999999999874 6789999997654
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0082 Score=62.05 Aligned_cols=136 Identities=10% Similarity=0.010 Sum_probs=77.4
Q ss_pred hhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCC--ceeEEEE-----EEcCCceeEEEeecCC
Q 005177 453 EAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKN--LIRLLGF-----CYNRHQAYLLYDYLPN 525 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~g~-----~~~~~~~~lv~Ey~~~ 525 (710)
.++ |....||+....+|+.+++|....+......+..|.+.+..++... +.+.+.. ....+..++||||++|
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G 111 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG 111 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCC
Confidence 344 6777899988778888999998743223445666777666554222 3334332 1224556889999987
Q ss_pred CChhh-----------h---hhc-----------CCCHHHH----HHHH---------------HHHHHHHHHHhc----
Q 005177 526 GNLSE-----------K---IRT-----------KRDWAAK----YKIV---------------LGVARGLCFLHH---- 557 (710)
Q Consensus 526 gsL~~-----------~---l~~-----------~~~~~~~----~~i~---------------~~ia~gL~yLH~---- 557 (710)
..+.. . +|. ..++..- ..+. ..+.+.++.+..
T Consensus 112 ~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 191 (328)
T 1zyl_A 112 RQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWRE 191 (328)
T ss_dssp EECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 54321 0 111 0122110 0010 011112222221
Q ss_pred CCCCCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 558 DCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 558 ~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
...+.++|+|+++.||+++ + .+.|.||+.+..
T Consensus 192 ~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 192 DFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred cCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1234689999999999999 4 899999986543
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0051 Score=54.31 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=15.8
Q ss_pred CcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCC
Q 005177 127 LISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSF 161 (710)
Q Consensus 127 L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l 161 (710)
|++|+|++|+|+...++.|..+++|++|+|++|.+
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 44444444444433333344444444444444443
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0032 Score=64.97 Aligned_cols=137 Identities=15% Similarity=0.116 Sum_probs=75.8
Q ss_pred hhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCc--eeEEEE------EEcCCceeEEEeec
Q 005177 452 EEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNL--IRLLGF------CYNRHQAYLLYDYL 523 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~ni--v~l~g~------~~~~~~~~lv~Ey~ 523 (710)
+.++.|....+|+....+| .+++|..... .....+..|++.+..++...+ .+++.. ....+..+++|||+
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l 105 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFL 105 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeC
Confidence 3455677778899887666 5778988752 123345556666655432222 222211 12235678999999
Q ss_pred CCCChhh--------------hhhc-------C----C---CHHHHHH------------HHHHHHHHHHHHhcC----C
Q 005177 524 PNGNLSE--------------KIRT-------K----R---DWAAKYK------------IVLGVARGLCFLHHD----C 559 (710)
Q Consensus 524 ~~gsL~~--------------~l~~-------~----~---~~~~~~~------------i~~~ia~gL~yLH~~----~ 559 (710)
+|..+.. .+|. . . .|..... +...+.+.++++++. .
T Consensus 106 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~ 185 (322)
T 2ppq_A 106 EGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDL 185 (322)
T ss_dssp CCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSS
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccC
Confidence 9865421 1121 0 0 1433111 011234445555421 2
Q ss_pred CCCceecCCCCCCeEecCCCceEEcccCccc
Q 005177 560 YPAIPHGDLKASNIVFDENMEPHLAEFGFKY 590 (710)
Q Consensus 560 ~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~ 590 (710)
.+.++|+|+.+.||+++++..+.|.||+.+.
T Consensus 186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 186 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 3478999999999999987666899998653
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0013 Score=62.37 Aligned_cols=83 Identities=13% Similarity=0.138 Sum_probs=48.8
Q ss_pred CCCcEEECCCC-cCcc----cCCccccCCCCCcEEECcCCCCCCC----CChhhcCCCCCCEEECCCCCCCcC----Cch
Q 005177 101 NELVDLNLSHN-SFSG----QFPVEIFNLTSLISLDISRNNFSGH----FPGGIQSLRNLLVLDAFSNSFSGS----VPA 167 (710)
Q Consensus 101 ~~L~~L~Ls~N-~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~L~~L~~L~L~~N~l~~~----~p~ 167 (710)
+.|+.|+|++| .+.. .+-..+..-+.|+.|+|++|++... +-..+..-+.|+.|+|++|.|... +-.
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 46788888875 6642 1233445566788888888877532 222333446677777777777632 223
Q ss_pred hccCCCCCCEEEccCC
Q 005177 168 EISQLEHLKVLNLAGS 183 (710)
Q Consensus 168 ~~~~L~~L~~L~L~~n 183 (710)
.+..-+.|++|+|++|
T Consensus 121 aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQ 136 (197)
T ss_dssp HTTTTCCCSEEECCCC
T ss_pred HHhhCCceeEEECCCC
Confidence 3344455777777654
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=96.24 E-value=0.003 Score=64.58 Aligned_cols=71 Identities=7% Similarity=-0.004 Sum_probs=40.9
Q ss_pred hhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCce-eEEEEEEcCCceeEEEeec-CCCCh
Q 005177 451 CEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLI-RLLGFCYNRHQAYLLYDYL-PNGNL 528 (710)
Q Consensus 451 ~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv-~l~g~~~~~~~~~lv~Ey~-~~gsL 528 (710)
.+.++.|....+|+. ..+++|.-..+.........|.+.+..+....+. +++++ +.+.-++|+||+ ++.++
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTM 95 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEEC
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccC
Confidence 456777888889988 4578887764322211234566666555432333 45544 344457999999 55444
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=96.17 E-value=0.0089 Score=52.72 Aligned_cols=55 Identities=16% Similarity=0.277 Sum_probs=26.1
Q ss_pred EEECcCCCCC-CCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCC
Q 005177 129 SLDISRNNFS-GHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYF 185 (710)
Q Consensus 129 ~L~Ls~N~l~-~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l 185 (710)
.++.++++++ ..+|..+. ++|++|+|++|+|+..-+..|..+++|++|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 4455555543 23332211 2455555555555544444445555555555555544
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=96.11 E-value=0.015 Score=61.33 Aligned_cols=134 Identities=13% Similarity=0.139 Sum_probs=75.9
Q ss_pred hhcCCCCCccEEEEcCC--------CcEEEEEEeeccchhHHHHHHHHHHHhccCCCCc-eeEEEEEEcCCceeEEEeec
Q 005177 453 EAARPQSAAGCKAVLPT--------GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNL-IRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~~~--------g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~g~~~~~~~~~lv~Ey~ 523 (710)
.+..|....+|+...++ +..+.+|+-...........+|.++++.+.-..+ .++++++.+ .+||||+
T Consensus 57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~i 132 (379)
T 3feg_A 57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQYI 132 (379)
T ss_dssp EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEECC
T ss_pred EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEEe
Confidence 34456677889988653 4688888863322234455678887776643233 456666543 2999999
Q ss_pred CCCChhhh-----------------hhc-------CCC--HHHHHHHHHHHH-------------------HHHHH----
Q 005177 524 PNGNLSEK-----------------IRT-------KRD--WAAKYKIVLGVA-------------------RGLCF---- 554 (710)
Q Consensus 524 ~~gsL~~~-----------------l~~-------~~~--~~~~~~i~~~ia-------------------~gL~y---- 554 (710)
+|..+..- ||. ... |.+..++..++. +.++.
T Consensus 133 ~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~ 212 (379)
T 3feg_A 133 PSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKL 212 (379)
T ss_dssp SEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHH
T ss_pred cCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHH
Confidence 97554310 111 112 333333333221 12222
Q ss_pred HhcC-CCCCceecCCCCCCeEecCC----CceEEcccCccc
Q 005177 555 LHHD-CYPAIPHGDLKASNIVFDEN----MEPHLAEFGFKY 590 (710)
Q Consensus 555 LH~~-~~~~iiHrDlk~~NiLl~~~----~~~kl~DfGla~ 590 (710)
|... ....++|+|+.+.||+++.+ +.+.+.||..+.
T Consensus 213 L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 213 LESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 2221 22368999999999999876 689999998764
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=96.03 E-value=0.012 Score=63.57 Aligned_cols=72 Identities=14% Similarity=0.035 Sum_probs=45.9
Q ss_pred hhhcCCCCCccEEEEcCC--------CcEEEEEEeeccchhHHHHHHHHHHHhccCCCCc-eeEEEEEEcCCceeEEEee
Q 005177 452 EEAARPQSAAGCKAVLPT--------GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNL-IRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~~~--------g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~g~~~~~~~~~lv~Ey 522 (710)
+.++.|....+|+...++ +..+.+|+-.... ....+..|.+++..+...++ .++++.+.+ .+||||
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~-~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e~ 153 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE-TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEY 153 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC-CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC-cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEEE
Confidence 345667778899998653 5688888874311 11344468887777654444 466766532 389999
Q ss_pred cCCCCh
Q 005177 523 LPNGNL 528 (710)
Q Consensus 523 ~~~gsL 528 (710)
+++..+
T Consensus 154 l~G~~l 159 (429)
T 1nw1_A 154 IPSRPL 159 (429)
T ss_dssp CCEEEC
T ss_pred eCCccc
Confidence 986443
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=95.92 E-value=0.012 Score=63.97 Aligned_cols=73 Identities=8% Similarity=-0.076 Sum_probs=44.7
Q ss_pred hhhcCCCCCccEEEEcCC-CcEEEEEEeeccchhHHHHHHHHHHHhccCCCCc-eeEEEEEEcCCceeEEEeecCCCCh
Q 005177 452 EEAARPQSAAGCKAVLPT-GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNL-IRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~~~-g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
+.++.|....+|+...++ +..+++|+...+....-....|.+++..+...++ .++++++. + .+||||+++..+
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 456667778899998765 5778888764322111112467777777765555 46777662 2 359999997444
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=95.92 E-value=0.011 Score=62.25 Aligned_cols=73 Identities=10% Similarity=-0.013 Sum_probs=41.7
Q ss_pred hhhcCCCCCccEEEEcCC---------CcEEEEEEeeccchhHHHHHHHHHHHhccCCCCce-eEEEEEEcCCceeEEEe
Q 005177 452 EEAARPQSAAGCKAVLPT---------GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLI-RLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~~~---------g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv-~l~g~~~~~~~~~lv~E 521 (710)
..++.|..-.+|+....+ +..+++|.-..+.........|.+.+..+...+++ ++++.. . -++|||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~e 114 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIEE 114 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEEE
Confidence 345567777889887654 26788887654322221235677777666533433 566544 2 368999
Q ss_pred ecCCCCh
Q 005177 522 YLPNGNL 528 (710)
Q Consensus 522 y~~~gsL 528 (710)
|+++..+
T Consensus 115 ~i~G~~l 121 (369)
T 3c5i_A 115 WLYGDPL 121 (369)
T ss_dssp CCCSEEC
T ss_pred EecCCcC
Confidence 9997543
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=95.88 E-value=0.0023 Score=60.60 Aligned_cols=87 Identities=13% Similarity=0.105 Sum_probs=62.2
Q ss_pred ccCCCCCcEEECcCC-CCCCC----CChhhcCCCCCCEEECCCCCCCc----CCchhccCCCCCCEEEccCCCCCCC---
Q 005177 121 IFNLTSLISLDISRN-NFSGH----FPGGIQSLRNLLVLDAFSNSFSG----SVPAEISQLEHLKVLNLAGSYFSGP--- 188 (710)
Q Consensus 121 ~~~l~~L~~L~Ls~N-~l~~~----~p~~l~~L~~L~~L~L~~N~l~~----~~p~~~~~L~~L~~L~L~~n~l~~~--- 188 (710)
+.+-+.|+.|+|++| ++... +-..+..-+.|+.|+|++|.+.. .+...+..-+.|++|+|+.|.|...
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 445678999999986 66531 23445667889999999999873 3344455668899999999998632
Q ss_pred -CCcccCCCCCCCeEEecCC
Q 005177 189 -IPSQFGSFKSLEFLHLAGN 207 (710)
Q Consensus 189 -~p~~~~~l~~L~~L~L~~N 207 (710)
+-..+..-+.|+.|+|++|
T Consensus 117 ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHhhCCceeEEECCCC
Confidence 2234555567999999865
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=95.06 E-value=0.093 Score=54.45 Aligned_cols=31 Identities=16% Similarity=0.279 Sum_probs=27.1
Q ss_pred CCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 561 PAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 561 ~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
+.++|+|+.+.||+++.++.+.|.||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4789999999999999888899999986543
|
| >3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=91.22 E-value=0.28 Score=52.33 Aligned_cols=72 Identities=3% Similarity=-0.083 Sum_probs=42.6
Q ss_pred hhcCCCCCccEEEEcCC--------CcEEEEEEeeccchhHHHHHHHHHHHhccCCCCc-eeEEEEEEcCCceeEEEeec
Q 005177 453 EAARPQSAAGCKAVLPT--------GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNL-IRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~~~--------g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~g~~~~~~~~~lv~Ey~ 523 (710)
.+..|....+|+...++ +..+++|+-..+....-...+|.++++.+.-.++ .++++.+ . -++||||+
T Consensus 77 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~efI 152 (424)
T 3mes_A 77 QIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEEFI 152 (424)
T ss_dssp EECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEECC
T ss_pred EcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEEEe
Confidence 34456677788887653 5778888865432222223456666666543233 3455533 2 37899999
Q ss_pred CCCCh
Q 005177 524 PNGNL 528 (710)
Q Consensus 524 ~~gsL 528 (710)
+|..+
T Consensus 153 ~G~~l 157 (424)
T 3mes_A 153 DGEPL 157 (424)
T ss_dssp CSEEC
T ss_pred CCccC
Confidence 98653
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=86.08 E-value=4.4 Score=38.54 Aligned_cols=99 Identities=16% Similarity=0.075 Sum_probs=59.1
Q ss_pred Chhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCcccc
Q 005177 527 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKI 603 (710)
Q Consensus 527 sL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 603 (710)
||.++|.. +++..+.+.++.|.+++|.-+-.+..+ ..+=+-|..|++..+|.+...+ +.+. .. ..
T Consensus 34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~---~~------~~ 101 (229)
T 2yle_A 34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD---AG------EP 101 (229)
T ss_dssp EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc---cc------cc
Confidence 67888754 788999999999999998665211011 1222335889999999988764 2110 00 01
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHhCCCC
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRL 639 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p 639 (710)
. ..+|+... ...+.+.=|||+|+++|.-+-=+.|
T Consensus 102 ~-~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 102 P-PVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred C-CCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1 12333321 2345667899999999988764433
|
| >4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=84.48 E-value=2.4 Score=40.23 Aligned_cols=91 Identities=13% Similarity=0.071 Sum_probs=67.6
Q ss_pred HHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCC
Q 005177 492 ITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKAS 571 (710)
Q Consensus 492 ~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~ 571 (710)
+.+|. ..||+.++. .+-.+++.+.+.|+.-+.+-=+..++ ..+...|++++..++..-++++.+ +|-=+.|+
T Consensus 37 l~LL~-~~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik-~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~ 108 (215)
T 4ann_A 37 MYLLE-QHSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK-SFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPD 108 (215)
T ss_dssp GGGGG-SCCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG-GSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGG
T ss_pred HHHHh-ccCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH-hcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecc
Confidence 44443 358998876 56666777777666544332222233 578899999999999998888766 88889999
Q ss_pred CeEecCCCceEEcccCccc
Q 005177 572 NIVFDENMEPHLAEFGFKY 590 (710)
Q Consensus 572 NiLl~~~~~~kl~DfGla~ 590 (710)
|+++|.++.|++.=.|+..
T Consensus 109 NL~f~~~~~p~i~~RGik~ 127 (215)
T 4ann_A 109 ELFFTRDGLPIAKTRGLQN 127 (215)
T ss_dssp GEEECTTSCEEESCCEETT
T ss_pred eEEEcCCCCEEEEEccCcc
Confidence 9999999999999888743
|
| >4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid} | Back alignment and structure |
|---|
Probab=81.68 E-value=4.6 Score=38.40 Aligned_cols=85 Identities=11% Similarity=0.081 Sum_probs=64.5
Q ss_pred CCCCceeEEEEEEcCCceeEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHH-HHhcCCCCCceecCCCCCCeEecC
Q 005177 499 RHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLC-FLHHDCYPAIPHGDLKASNIVFDE 577 (710)
Q Consensus 499 ~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~-yLH~~~~~~iiHrDlk~~NiLl~~ 577 (710)
.||.. -...-.+++.+.+.|+--+++-=+..++ ..+...|++++..++.-.. +++.+ +|-=+.|+||++|.
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~-~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~NL~f~~ 119 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR-KTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPENLMFNR 119 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH-TSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGGEEECT
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH-hcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCceEEEeC
Confidence 58887 3344466778777777654543333443 5788899999999998887 77765 78889999999999
Q ss_pred CCceEEcccCcccc
Q 005177 578 NMEPHLAEFGFKYL 591 (710)
Q Consensus 578 ~~~~kl~DfGla~~ 591 (710)
++.|++.=.|+-..
T Consensus 120 ~~~p~i~hRGi~~~ 133 (219)
T 4ano_A 120 ALEPFFLHVGVKES 133 (219)
T ss_dssp TCCEEESCCEETTT
T ss_pred CCcEEEEEcCCccc
Confidence 99999999997443
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 710 | ||||
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 2e-33 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 2e-32 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 2e-32 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 3e-32 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 2e-31 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 9e-30 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 2e-29 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 5e-29 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 2e-28 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 9e-28 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 2e-27 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 6e-27 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 9e-27 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 9e-27 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 1e-26 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 2e-26 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 7e-26 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 2e-25 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 2e-25 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 4e-25 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 1e-24 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 2e-24 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 3e-24 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 2e-23 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 3e-23 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 5e-23 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 6e-10 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 6e-23 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 9e-23 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 1e-22 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 1e-22 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 1e-22 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 3e-22 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 4e-22 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 1e-17 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 3e-15 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 4e-13 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 6e-13 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 1e-09 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 0.002 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 5e-22 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 1e-21 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 1e-21 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 2e-21 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 2e-20 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 8e-20 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 1e-19 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 8e-14 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 4e-19 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 3e-18 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 5e-18 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 6e-18 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 8e-18 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 1e-17 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 1e-17 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 1e-16 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 1e-06 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 4e-17 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 4e-17 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 3e-16 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 9e-16 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 1e-15 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 2e-15 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 2e-14 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 2e-14 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 2e-14 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 7e-14 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 1e-13 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 2e-13 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 2e-13 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 3e-13 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 8e-12 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 2e-09 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 2e-09 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 1e-12 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 2e-10 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 5e-10 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 6e-09 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 3e-06 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 2e-12 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 2e-12 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 3e-12 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 1e-11 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 2e-11 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 2e-10 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 2e-10 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 1e-07 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 4e-08 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 5e-08 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 5e-07 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 1e-05 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 8e-08 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 1e-05 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 6e-05 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 7e-05 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 1e-07 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 0.001 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 6e-07 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 6e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 3e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 4e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 4e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 4e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.002 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 3e-06 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 2e-05 | |
| d2omxa2 | 199 | c.10.2.1 (A:37-235) Internalin B {Listeria monocyt | 3e-06 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 2e-05 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 0.003 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 0.003 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 3e-04 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 0.001 | |
| d1m9la_ | 198 | c.10.3.1 (A:) Outer arm dynein light chain 1 {Gree | 7e-04 | |
| d2ifga3 | 156 | c.10.2.7 (A:36-191) High affinity nerve growth fac | 0.001 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 0.003 |
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 126 bits (318), Expect = 2e-33
Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 20/246 (8%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCY-NRHQAYLLYDYLPNGN 527
G V+VK I+ AT ++E + + +RH NL++LLG + Y++ +Y+ G+
Sbjct: 29 RGNKVAVKCIKNDATAQAFLAE-ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 87
Query: 528 LSEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 583
L + +R++ K L V + +L + H DL A N++ E+ +
Sbjct: 88 LVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKV 144
Query: 584 AEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAG 643
++FG + + WT + E K DV+ FG ++ EI + GR+
Sbjct: 145 SDFGLTKEASSTQDTGKLPVKWT-APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR 203
Query: 644 SSLQNKPIDGLLGEMYNENEVGSSSSLQDEI-KLVLDVALLCTRSTPSDRPSMEEALKLL 702
L+ ++ E G D V +V C + RPS + + L
Sbjct: 204 IPLK---------DVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQL 254
Query: 703 SGLKPH 708
+K H
Sbjct: 255 EHIKTH 260
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (313), Expect = 2e-32
Identities = 49/249 (19%), Positives = 97/249 (38%), Gaps = 23/249 (9%)
Query: 472 TVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528
V+VK + A + + F + RH N++ +G+ Q ++ + +L
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSL 90
Query: 529 SEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 585
+ + I A+G+ +LH I H DLK++NI E++ + +
Sbjct: 91 YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGD 147
Query: 586 FGFKYLTQLADGSFPAK-----IAWTESGEFYNAMKEEMY---MDVYGFGEIILEILTNG 637
FG + GS + I W + E + Y DVY FG ++ E++T G
Sbjct: 148 FGLATVKSRWSGSHQFEQLSGSILWM-APEVIRMQDKNPYSFQSDVYAFGIVLYELMT-G 205
Query: 638 RLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEE 697
+L + + +++ I + + + S+ +K + C + +RP +
Sbjct: 206 QLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK---RLMAECLKKKRDERPLFPQ 262
Query: 698 ALKLLSGLK 706
L + L
Sbjct: 263 ILASIELLA 271
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 125 bits (314), Expect = 2e-32
Identities = 53/278 (19%), Positives = 96/278 (34%), Gaps = 35/278 (12%)
Query: 463 CKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----QAYL 518
+ G V+VK R I + +RH+N++ + + Q +L
Sbjct: 20 WRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78
Query: 519 LYDYLPNGNLSEKI-RTKRDWAAKYKIVLGVARGLCFLHHDCY-----PAIPHGDLKASN 572
+ DY +G+L + + R K+ L A GL LH + PAI H DLK+ N
Sbjct: 79 VSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKN 138
Query: 573 IVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNA---MKEEMYM-------- 621
I+ +N +A+ G A + + Y A + + + M
Sbjct: 139 ILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKR 198
Query: 622 -DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN------------EVGSSS 668
D+Y G + EI + Q D + + E + +
Sbjct: 199 ADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW 258
Query: 669 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706
+ ++++ + C + + R + K LS L
Sbjct: 259 QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (311), Expect = 3e-32
Identities = 46/252 (18%), Positives = 95/252 (37%), Gaps = 17/252 (6%)
Query: 464 KAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 523
V++K I GA + E + + H L++L G C + L+++++
Sbjct: 23 LGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 82
Query: 524 PNGNLSEKIRTK---RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580
+G LS+ +RT+ + L V G + + + H DL A N + EN
Sbjct: 83 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEG---MAYLEEACVIHRDLAARNCLVGENQV 139
Query: 581 PHLAEFGFKYLTQLADGSFPAKIAWTE---SGEFYNAMKEEMYMDVYGFGEIILEILTNG 637
+++FG + + S E ++ + DV+ FG ++ E+ + G
Sbjct: 140 IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG 199
Query: 638 RLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEE 697
++ S ++ ++ + + + C + P DRP+
Sbjct: 200 KIPYENRSNSE-----VVEDISTGFRLYKPRLASTHVY---QIMNHCWKERPEDRPAFSR 251
Query: 698 ALKLLSGLKPHG 709
L+ L+ + G
Sbjct: 252 LLRQLAEIAESG 263
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 121 bits (304), Expect = 2e-31
Identities = 48/250 (19%), Positives = 101/250 (40%), Gaps = 25/250 (10%)
Query: 463 CKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522
V+VK ++ G+ + ++H+ L+RL Y++ +Y
Sbjct: 30 WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEY 88
Query: 523 LPNGNLSEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN 578
+ NG+L + ++T + +A G+ F+ H DL+A+NI+ +
Sbjct: 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDT 145
Query: 579 MEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM------DVYGFGEIILE 632
+ +A+FG L +L + + + + A + Y DV+ FG ++ E
Sbjct: 146 LSCKIADFG---LARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 202
Query: 633 ILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDR 692
I+T+GR+ G + ++ + + + +E+ + LC + P DR
Sbjct: 203 IVTHGRIPYPGMTNPE-----VIQNLERGYRMVRPDNCPEELY---QLMRLCWKERPEDR 254
Query: 693 PSMEEALKLL 702
P+ + +L
Sbjct: 255 PTFDYLRSVL 264
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (293), Expect = 9e-30
Identities = 47/247 (19%), Positives = 97/247 (39%), Gaps = 21/247 (8%)
Query: 464 KAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 523
V++K ++ G + + + +RH+ L++L Y++ +Y+
Sbjct: 35 MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYM 93
Query: 524 PNGNLSEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM 579
G+L + ++ + + +A G+ ++ H DL+A+NI+ EN+
Sbjct: 94 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENL 150
Query: 580 EPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMY---MDVYGFGEIILEILTN 636
+A+FG L + + + + A + DV+ FG ++ E+ T
Sbjct: 151 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 210
Query: 637 GRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI-KLVLDVALLCTRSTPSDRPSM 695
GR+ G + E+ ++ E G E + + D+ C R P +RP+
Sbjct: 211 GRVPYPGMVNR---------EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 261
Query: 696 EEALKLL 702
E L
Sbjct: 262 EYLQAFL 268
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 115 bits (288), Expect = 2e-29
Identities = 37/246 (15%), Positives = 84/246 (34%), Gaps = 17/246 (6%)
Query: 463 CKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522
V++K I+ G+ E + + H+ L++L G C + +++ +Y
Sbjct: 21 KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 80
Query: 523 LPNGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM 579
+ NG L +R R ++ V + +L H DL A N + ++
Sbjct: 81 MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQG 137
Query: 580 EPHLAEFGFKYLTQLADGSFPAKIAWTE---SGEFYNAMKEEMYMDVYGFGEIILEILTN 636
+++FG + + + E K D++ FG ++ EI +
Sbjct: 138 VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL 197
Query: 637 GRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSME 696
G++ + + + +++ + C +RP+ +
Sbjct: 198 GKMPYERFTNSE-----TAEHIAQGLRLYRPHLASEKVY---TIMYSCWHEKADERPTFK 249
Query: 697 EALKLL 702
L +
Sbjct: 250 ILLSNI 255
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 115 bits (289), Expect = 5e-29
Identities = 43/253 (16%), Positives = 98/253 (38%), Gaps = 25/253 (9%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525
I V++K ++ G T K +F++ G H N+I L G ++ +++ N
Sbjct: 53 REIFVAIKTLKSGYTE-KQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMEN 111
Query: 526 GNLSEKIRTK---RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 582
G+L +R ++ G+A G+ +L H DL A NI+ + N+
Sbjct: 112 GSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCK 168
Query: 583 LAEFGF-KYLTQLADGSFPAKIAWTESGEFYNA---MKEEMYM---DVYGFGEIILEILT 635
+++FG ++L + + A ++ + DV+ +G ++ E+++
Sbjct: 169 VSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 228
Query: 636 NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSM 695
G + Q+ ++ + + + + + L C + + RP
Sbjct: 229 YGERPYWDMTNQD-----VINAIEQDYRLPPPMDCPSALH---QLMLDCWQKDRNHRPKF 280
Query: 696 EEALKLLSGLKPH 708
+ + L + +
Sbjct: 281 GQIVNTLDKMIRN 293
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 113 bits (283), Expect = 2e-28
Identities = 51/251 (20%), Positives = 96/251 (38%), Gaps = 21/251 (8%)
Query: 464 KAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522
+ V +TV+VK ++ ++ + + ++H NL++LLG C Y++ ++
Sbjct: 35 EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 94
Query: 523 LPNGNLSEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN 578
+ GNL + +R + ++ + +L H DL A N + EN
Sbjct: 95 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGEN 151
Query: 579 MEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMY---MDVYGFGEIILEILT 635
+A+FG L + A + ++ + DV+ FG ++ EI T
Sbjct: 152 HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
Query: 636 NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI-KLVLDVALLCTRSTPSDRPS 694
G G L ++Y E + + V ++ C + PSDRPS
Sbjct: 212 YGMSPYPGIDLS---------QVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS 262
Query: 695 MEEALKLLSGL 705
E + +
Sbjct: 263 FAEIHQAFETM 273
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 111 bits (278), Expect = 9e-28
Identities = 42/246 (17%), Positives = 85/246 (34%), Gaps = 26/246 (10%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525
I V++K ++ G + E + + + ++RL+G C L+ +
Sbjct: 35 KQIDVAIKVLKQGTEK-ADTEEMMREAQIMHQLDNPYIVRLIGVCQAEAL-MLVMEMAGG 92
Query: 526 GNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 582
G L + + KR + +++ V+ G+ +L H DL A N++
Sbjct: 93 GPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAK 149
Query: 583 LAEFGFKYLTQLADGSFPAKIAWTESGEFY--NAMKEEMYM---DVYGFGEIILEILTNG 637
+++FG D + A+ A ++Y + + DV+ +G + E L+ G
Sbjct: 150 ISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYG 209
Query: 638 RLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI-KLVLDVALLCTRSTPSDRPSME 696
+ E+ E G E + + C DRP
Sbjct: 210 QKPYKKMKGP---------EVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFL 260
Query: 697 EALKLL 702
+ +
Sbjct: 261 TVEQRM 266
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 111 bits (277), Expect = 2e-27
Identities = 47/265 (17%), Positives = 86/265 (32%), Gaps = 37/265 (13%)
Query: 468 PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524
+TV+VK ++ A R ++SE H N++ LLG C ++ +Y
Sbjct: 51 DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCC 110
Query: 525 NGNLSEKIRTKR--------------------DWAAKYKIVLGVARGLCFLHHDCYPAIP 564
G+L +R KR D VA+G+ FL
Sbjct: 111 YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CI 167
Query: 565 HGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMD-- 622
H DL A NI+ + +FG + A
Sbjct: 168 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFE 227
Query: 623 --VYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 680
V+ +G + E+ + G G + +K + + + + + D+
Sbjct: 228 SDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMY-------DI 280
Query: 681 ALLCTRSTPSDRPSMEEALKLLSGL 705
C + P RP+ ++ ++L+
Sbjct: 281 MKTCWDADPLKRPTFKQIVQLIEKQ 305
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 109 bits (273), Expect = 6e-27
Identities = 51/249 (20%), Positives = 89/249 (35%), Gaps = 23/249 (9%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCY-NRHQAYLLYDYLP 524
I +VK + T I VS+F+T H N++ LLG C + ++ Y+
Sbjct: 54 KKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 112
Query: 525 NGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 584
+G+L IR + ++ + + H DL A N + DE +A
Sbjct: 113 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVA 172
Query: 585 EFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM--------DVYGFGEIILEILTN 636
+FG + D F + T + M E DV+ FG ++ E++T
Sbjct: 173 DFGLA--RDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 230
Query: 637 GRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSME 696
G + + + + + D + +V L C RPS
Sbjct: 231 GAPPYPDVNTFD-----ITVYLLQGRRLLQPEYCPDPLY---EVMLKCWHPKAEMRPSFS 282
Query: 697 EALKLLSGL 705
E + +S +
Sbjct: 283 ELVSRISAI 291
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 108 bits (272), Expect = 9e-27
Identities = 50/243 (20%), Positives = 92/243 (37%), Gaps = 22/243 (9%)
Query: 467 LPTGITVSVKKIEWGATRIKIVSEFITR----IGTVRHKNLIRLLGFCYNRHQAYLLYDY 522
+ V++KK+ + + + I + + +RH N I+ G H A+L+ +Y
Sbjct: 37 VRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96
Query: 523 LPNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580
K+ + G +GL +LH + H D+KA NI+ E
Sbjct: 97 CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGL 153
Query: 581 PHLAEFGFKYLTQLAD---GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNG 637
L +FG + A+ G+ P +A E + + + +DV+ G +E+
Sbjct: 154 VKLGDFGSASIMAPANSFVGT-PYWMAP-EVILAMDEGQYDGKVDVWSLGITCIELAE-R 210
Query: 638 RLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEE 697
+ + + L NE+ S + + + C + P DRP+ E
Sbjct: 211 KPPLFNMN----AMSALYHIAQNESPALQSGHWSEYFR---NFVDSCLQKIPQDRPTSEV 263
Query: 698 ALK 700
LK
Sbjct: 264 LLK 266
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 108 bits (271), Expect = 9e-27
Identities = 53/273 (19%), Positives = 104/273 (38%), Gaps = 51/273 (18%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525
V+VK ++ A+ + ++F + N+++LLG C LL++Y+
Sbjct: 42 PFTMVAVKMLKEEASA-DMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAY 100
Query: 526 GNLSEKIRTKR--------------------------DWAAKYKIVLGVARGLCFLHHDC 559
G+L+E +R+ A + I VA G+ +L
Sbjct: 101 GDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK 160
Query: 560 YPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEM 619
H DL N + ENM +A+FG L++ + K ++ E +
Sbjct: 161 ---FVHRDLATRNCLVGENMVVKIADFG---LSRNIYSADYYKADGNDAIPIRWMPPESI 214
Query: 620 YM-------DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 672
+ DV+ +G ++ EI + G G + + ++ + + N + +
Sbjct: 215 FYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE-----VIYYVRDGNILACPENCPL 269
Query: 673 EIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705
E+ ++ LC P+DRPS ++L +
Sbjct: 270 ELY---NLMRLCWSKLPADRPSFCSIHRILQRM 299
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 108 bits (271), Expect = 1e-26
Identities = 47/266 (17%), Positives = 87/266 (32%), Gaps = 42/266 (15%)
Query: 469 TGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525
I V+VK ++ A R ++SE H+N++ LLG C YL+++Y
Sbjct: 66 VSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCY 125
Query: 526 GNLSEKIRTKR-------------------------DWAAKYKIVLGVARGLCFLHHDCY 560
G+L +R+KR + VA+G+ FL
Sbjct: 126 GDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF--- 182
Query: 561 PAIPHGDLKASNIVFDENMEPHLAEFGF-KYLTQLADGSFPAKIAWT---ESGEFYNAMK 616
+ H DL A N++ + +FG + + ++ + E
Sbjct: 183 KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI 242
Query: 617 EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 676
+ DV+ +G ++ EI + G G + + + ++ +
Sbjct: 243 YTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIY----- 297
Query: 677 VLDVALLCTRSTPSDRPSMEEALKLL 702
+ C RPS L
Sbjct: 298 --IIMQSCWAFDSRKRPSFPNLTSFL 321
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 107 bits (267), Expect = 2e-26
Identities = 44/245 (17%), Positives = 85/245 (34%), Gaps = 24/245 (9%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525
TV+VK ++ A + E + + + ++R++G C L+ +
Sbjct: 33 VVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAEL 91
Query: 526 GNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 583
G L++ ++ R ++V V+ G+ +L H DL A N++ +
Sbjct: 92 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKI 148
Query: 584 AEFGF------KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNG 637
++FG A + W + E N K DV+ FG ++ E + G
Sbjct: 149 SDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYKFSSKSDVWSFGVLMWEAFSYG 207
Query: 638 RLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEE 697
+ G + + +G + E+ D+ LC +RP
Sbjct: 208 QKPYRGMKGSE-----VTAMLEKGERMGCPAGCPREMY---DLMNLCWTYDVENRPGFAA 259
Query: 698 ALKLL 702
L
Sbjct: 260 VELRL 264
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 105 bits (263), Expect = 7e-26
Identities = 41/246 (16%), Positives = 84/246 (34%), Gaps = 22/246 (8%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525
+ V++K + T + +F+ H ++++L+G +++ +
Sbjct: 34 PALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTL 91
Query: 526 GNLSE---KIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 582
G L + D A+ ++ L +L H D+ A N++ N
Sbjct: 92 GELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVK 148
Query: 583 LAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM---DVYGFGEIILEILTNGRL 639
L +FG + + +K ++ + DV+ FG + EIL +G
Sbjct: 149 LGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK 208
Query: 640 TNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEAL 699
G + ++G + N + + + + C PS RP E
Sbjct: 209 PFQGVKNND-----VIGRIENGERLPMPPNCPPTLY---SLMTKCWAYDPSRRPRFTELK 260
Query: 700 KLLSGL 705
LS +
Sbjct: 261 AQLSTI 266
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 105 bits (262), Expect = 2e-25
Identities = 59/264 (22%), Positives = 100/264 (37%), Gaps = 37/264 (14%)
Query: 471 ITVSVKKIEWGATRIKIVSEFITRIGTV----RHKNLIRLLGFCYNRHQAYLLYDYLPNG 526
+ ++K+++ A++ +F + + H N+I LLG C +R YL +Y P+G
Sbjct: 38 MDAAIKRMKEYASK-DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 96
Query: 527 NLSEKIRTKR------------------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDL 568
NL + +R R VARG+ +L H DL
Sbjct: 97 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDL 153
Query: 569 KASNIVFDENMEPHLAEFGF--KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGF 626
A NI+ EN +A+FG + + W E N DV+ +
Sbjct: 154 AARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAI-ESLNYSVYTTNSDVWSY 212
Query: 627 GEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTR 686
G ++ EI++ G G + L ++ + + DE+ D+ C R
Sbjct: 213 GVLLWEIVSLGGTPYCGMTCAE-----LYEKLPQGYRLEKPLNCDDEVY---DLMRQCWR 264
Query: 687 STPSDRPSMEEALKLLSGLKPHGK 710
P +RPS + L L+ + K
Sbjct: 265 EKPYERPSFAQILVSLNRMLEERK 288
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 104 bits (260), Expect = 2e-25
Identities = 52/262 (19%), Positives = 101/262 (38%), Gaps = 28/262 (10%)
Query: 463 CKAVLPTG-----ITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRH 514
K +L T + V++K ++ G T R+ + E +G H N+IRL G
Sbjct: 24 YKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGE-AGIMGQFSHHNIIRLEGVISKYK 82
Query: 515 QAYLLYDYLPNGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKAS 571
++ +Y+ NG L + +R K ++ G+A G+ + H DL A
Sbjct: 83 PMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGM---KYLANMNYVHRDLAAR 139
Query: 572 NIVFDENMEPHLAEFGF-KYLTQLADGSFPAKIAWTESG----EFYNAMKEEMYMDVYGF 626
NI+ + N+ +++FG + L + ++ E + K DV+ F
Sbjct: 140 NILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSF 199
Query: 627 GEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTR 686
G ++ E++T G S + + N+ + D + + + C +
Sbjct: 200 GIVMWEVMTYGERPYWELSNHE------VMKAINDGFRLPTPM--DCPSAIYQLMMQCWQ 251
Query: 687 STPSDRPSMEEALKLLSGLKPH 708
+ RP + + +L L
Sbjct: 252 QERARRPKFADIVSILDKLIRA 273
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 104 bits (261), Expect = 4e-25
Identities = 43/274 (15%), Positives = 89/274 (32%), Gaps = 44/274 (16%)
Query: 467 LPTGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYL 523
P+G+ ++ K I + I ++ I + ++ G Y+ + + +++
Sbjct: 28 KPSGLVMARKLIH-LEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 86
Query: 524 PNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 581
G+L + ++ K+ + V +GL +L I H D+K SNI+ + E
Sbjct: 87 DGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEI 144
Query: 582 HLAEFGF-KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLT 640
L +FG L SF ++ S E + D++ G ++E+
Sbjct: 145 KLCDFGVSGQLIDSMANSFVGTRSYM-SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Query: 641 NAGSSLQ--------------------NKPIDGLLGEMYNENEVGSSSSLQDEI------ 674
+ + P L + + L D I
Sbjct: 204 PPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPP 263
Query: 675 --------KLVLDVALLCTRSTPSDRPSMEEALK 700
D C P++R +++ +
Sbjct: 264 KLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 297
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (255), Expect = 1e-24
Identities = 59/271 (21%), Positives = 104/271 (38%), Gaps = 44/271 (16%)
Query: 464 KAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTV----RHKNLIRLLGFCYNRHQAYLL 519
K V+VK ++ AT K +S+ I+ + + +HKN+I LLG C Y++
Sbjct: 39 KDKPNRVTKVAVKMLKSDATE-KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVI 97
Query: 520 YDYLPNGNLSEKIRTKR------------------DWAAKYKIVLGVARGLCFLHHDCYP 561
+Y GNL E ++ +R VARG+ +L
Sbjct: 98 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---K 154
Query: 562 AIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM 621
H DL A N++ E+ +A+F L + K E ++
Sbjct: 155 KCIHRDLAARNVLVTEDNVMKIADF---GLARDIHHIDYYKKTTNGRLPVKWMAPEALFD 211
Query: 622 -------DVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674
DV+ FG ++ EI T G G P++ L + + + S+ +E+
Sbjct: 212 RIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-----PVEELFKLLKEGHRMDKPSNCTNEL 266
Query: 675 KLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705
+ C + PS RP+ ++ ++ L +
Sbjct: 267 Y---MMMRDCWHAVPSQRPTFKQLVEDLDRI 294
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 101 bits (252), Expect = 2e-24
Identities = 48/251 (19%), Positives = 89/251 (35%), Gaps = 28/251 (11%)
Query: 467 LPTGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQA--YLLYD 521
G + K++++G+ ++ + ++H N++R +R Y++ +
Sbjct: 26 KSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVME 85
Query: 522 YLPNGNLSEKIRTKR------DWAAKYKIVLGVARGLCFLH--HDCYPAIPHGDLKASNI 573
Y G+L+ I D +++ + L H D + H DLK +N+
Sbjct: 86 YCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANV 145
Query: 574 VFDENMEPHLAEFGF-KYLTQLADGSFPAKIAWT---ESGEFYNAMKEEMYMDVYGFGEI 629
D L +FG + L D SF T S E N M D++ G +
Sbjct: 146 FLDGKQNVKLGDFGLARILNH--DTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCL 203
Query: 630 ILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTP 689
+ E+ S + L G++ DE+ ++
Sbjct: 204 LYELCA-LMPPFTAFSQKE-----LAGKIREGKFRRIPYRYSDELN---EIITRMLNLKD 254
Query: 690 SDRPSMEEALK 700
RPS+EE L+
Sbjct: 255 YHRPSVEEILE 265
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 100 bits (251), Expect = 3e-24
Identities = 47/246 (19%), Positives = 97/246 (39%), Gaps = 23/246 (9%)
Query: 469 TGITVSVKKIEWG-ATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524
++V+VK ++ ++ + + +FI + ++ H+NLIRL G ++ + P
Sbjct: 35 KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPM-KMVTELAP 93
Query: 525 NGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 581
G+L +++R + + + VA G+ +L H DL A N++
Sbjct: 94 LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLV 150
Query: 582 HLAEFGFKYLTQLADGSFPAK--IAWTESGEFYNAMKEEMY---MDVYGFGEIILEILTN 636
+ +FG D + + + ++K + D + FG + E+ T
Sbjct: 151 KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTY 210
Query: 637 GRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSME 696
G+ G + +L ++ E E +D + + +V + C P DRP+
Sbjct: 211 GQEPWIGLNGSQ-----ILHKIDKEGE--RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 263
Query: 697 EALKLL 702
L
Sbjct: 264 ALRDFL 269
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 99.2 bits (246), Expect = 2e-23
Identities = 46/258 (17%), Positives = 92/258 (35%), Gaps = 31/258 (12%)
Query: 468 PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524
V++K + A+ RI+ ++E + + +++RLLG ++ + +
Sbjct: 48 EPETRVAIKTVNEAASMRERIEFLNE-ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMT 106
Query: 525 NGNLSEKIRTKR------------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASN 572
G+L +R+ R + ++ +A G+ +L+ + H DL A N
Sbjct: 107 RGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARN 163
Query: 573 IVFDENMEPHLAEFGFKYLTQLADGSFPAKIA----WTESGEFYNAMKEEMYMDVYGFGE 628
+ E+ + +FG D S E Y DV+ FG
Sbjct: 164 CMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGV 223
Query: 629 IILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRST 688
++ EI T G S + +L + + + D + ++ +C +
Sbjct: 224 VLWEIATLAEQPYQGLSNEQ-----VLRFVMEGGLLDKPDNCPDMLF---ELMRMCWQYN 275
Query: 689 PSDRPSMEEALKLLSGLK 706
P RPS E + +
Sbjct: 276 PKMRPSFLEIISSIKEEM 293
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 99.4 bits (247), Expect = 3e-23
Identities = 49/244 (20%), Positives = 94/244 (38%), Gaps = 22/244 (9%)
Query: 467 LPTGITVSVKKI--EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524
TG + K + + + + E I + +RH L+ L + ++ ++Y+++
Sbjct: 48 RATGNNFAAKFVMTPHESDKETVRKE-IQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMS 106
Query: 525 NGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF--DENM 579
G L EK+ + + + V +GLC +H + H DLK NI+F +
Sbjct: 107 GGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSN 163
Query: 580 EPHLAEFGF-KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGR 638
E L +FG +L A + E Y D++ G + +L+ G
Sbjct: 164 ELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLS-GL 222
Query: 639 LTNAGSSLQN--KPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSME 696
G + + + M + G S +D I+ +L P+ R ++
Sbjct: 223 SPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLA-------DPNTRMTIH 275
Query: 697 EALK 700
+AL+
Sbjct: 276 QALE 279
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 98.3 bits (243), Expect = 5e-23
Identities = 67/333 (20%), Positives = 116/333 (34%), Gaps = 36/333 (10%)
Query: 29 EALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLSMKGLS 88
+ALL +K +L + +L W P + +W GV C+ +
Sbjct: 9 QALLQIKKDLGNP-TTLSSW--LPTTDCCN----RTWLGVLCDTDTQTYR---------- 51
Query: 89 GALPGKPLRIFFNELVDLNLSHNSFSGQFPV--EIFNLTSLISLDISRN-NFSGHFPGGI 145
+ +L+LS + +P+ + NL L L I N G P I
Sbjct: 52 --------------VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAI 97
Query: 146 QSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLA 205
L L L + SG++P +SQ++ L L+ + + SG +P S +L +
Sbjct: 98 AKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFD 157
Query: 206 GNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKEL 265
GN ++ IP G + + ++D++ L
Sbjct: 158 GNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNM-LEGDASVL 216
Query: 266 SNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLM 325
K + L LDL +NR+ G +P+ LK L L++
Sbjct: 217 FGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVS 276
Query: 326 YNEMSGTVPESLVQLPSLEILFIWNNYFSGSLP 358
+N + G +P+ L ++ NN P
Sbjct: 277 FNNLCGEIPQ-GGNLQRFDVSAYANNKCLCGSP 308
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 59.0 bits (141), Expect = 6e-10
Identities = 55/240 (22%), Positives = 97/240 (40%), Gaps = 6/240 (2%)
Query: 170 SQLEHLKVLNLAGSYFSG--PIPSQFGSFKSLEFLHLAGNL-LNDQIPAELGMLKTVTHM 226
+Q + L+L+G PIPS + L FL++ G L IP + L + ++
Sbjct: 47 TQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYL 106
Query: 227 EIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVP 286
I + G IP L + + LD + LSG++P +S+L L + N+++G +P
Sbjct: 107 YITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP 166
Query: 287 WEFSRVTTLKS-LDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEI 345
+ + L + + +S NRL+G IP +FA+L +
Sbjct: 167 DSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKN--TQ 224
Query: 346 LFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIV 405
+G + L +D+ N G++P + L L + NN G +
Sbjct: 225 KIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI 284
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 98.2 bits (244), Expect = 6e-23
Identities = 38/240 (15%), Positives = 85/240 (35%), Gaps = 15/240 (6%)
Query: 467 LPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526
+ T K ++ T +V + I+ + RH+N++ L + + ++++++
Sbjct: 27 TSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGL 86
Query: 527 NLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 583
++ E+I T + V V L FLH I H D++ NI++ +
Sbjct: 87 DIFERINTSAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTI 143
Query: 584 AEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMY---MDVYGFGEIILEILTNGRLT 640
F QL G + + ++ D++ G ++ +L+ G
Sbjct: 144 KIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLS-GINP 202
Query: 641 NAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700
+ Q ++ + N + ++ +D R + EAL+
Sbjct: 203 FLAETNQQ-----IIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.6 bits (242), Expect = 9e-23
Identities = 49/250 (19%), Positives = 88/250 (35%), Gaps = 27/250 (10%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525
I V++K++ AT K E + +V + ++ RLLG C L+ +P
Sbjct: 37 VKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLITQLMPF 94
Query: 526 GNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 582
G L + +R + + +A+G+ +L + H DL A N++
Sbjct: 95 GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVK 151
Query: 583 LAEFGFKYLTQLADGSFPAK-----IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNG 637
+ +FG L + + A+ I W + E DV+ +G + E++T G
Sbjct: 152 ITDFGLAKLLGAEEKEYHAEGGKVPIKW-MALESILHRIYTHQSDVWSYGVTVWELMTFG 210
Query: 638 RLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI-KLVLDVALLCTRSTPSDRPSME 696
G E+ + E G V + + C RP
Sbjct: 211 SKPYDGIPAS---------EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 261
Query: 697 EALKLLSGLK 706
E + S +
Sbjct: 262 ELIIEFSKMA 271
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 96.2 bits (239), Expect = 1e-22
Identities = 44/247 (17%), Positives = 84/247 (34%), Gaps = 27/247 (10%)
Query: 467 LPTGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYL 523
T V+VK ++ + I + H+N+++ G + YL +Y
Sbjct: 27 RVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC 85
Query: 524 PNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 581
G L ++I + + G+ +LH I H D+K N++ DE
Sbjct: 86 SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNL 142
Query: 582 HLAEFGF-KYLTQLADGSFPAKIAWTESGEFYNA----MKEEMY---MDVYGFGEIILEI 633
+++FG K+ T Y A + E + +DV+ G ++ +
Sbjct: 143 KISDFGLATVFRYNNRERLLNKMCGT---LPYVAPELLKRREFHAEPVDVWSCGIVLTAM 199
Query: 634 LTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRP 693
L + S + D + Y S+ + +L PS R
Sbjct: 200 LAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVE-------NPSARI 252
Query: 694 SMEEALK 700
++ + K
Sbjct: 253 TIPDIKK 259
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 96.6 bits (240), Expect = 1e-22
Identities = 40/250 (16%), Positives = 82/250 (32%), Gaps = 31/250 (12%)
Query: 467 LPTGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYL 523
T + + K I+ + + +++ I + H N+++LL Y + ++L ++
Sbjct: 34 KETSVLAAAKVID--TKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC 91
Query: 524 PNGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580
G + + + + L +LH I H DLKA NI+F + +
Sbjct: 92 AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGD 148
Query: 581 PHLAEFGF-KYLTQLAD--GSFPAKIAWTESGEFYNAMKEEMYM----DVYGFGEIILEI 633
LA+FG T+ SF W ++ DV+ G ++E+
Sbjct: 149 IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 208
Query: 634 LTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL---VLDVALLCTRSTPS 690
+ + + + +L + D C
Sbjct: 209 AE-IEPPHHELNPM---------RVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVD 258
Query: 691 DRPSMEEALK 700
R + + L+
Sbjct: 259 ARWTTSQLLQ 268
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.4 bits (237), Expect = 1e-22
Identities = 41/238 (17%), Positives = 89/238 (37%), Gaps = 19/238 (7%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITR----IGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524
+ +++K + V + R +RH N++RL G+ ++ + YL+ +Y P
Sbjct: 30 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 89
Query: 525 NGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 582
G + +++ D + +A L + H + H D+K N++ E
Sbjct: 90 LGTVYRELQKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELK 146
Query: 583 LAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNA 642
+A+FG+ + + E + +D++ G + E L G+
Sbjct: 147 IADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV-GKPPFE 205
Query: 643 GSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700
++ Q + + E + + + D+ + PS RP + E L+
Sbjct: 206 ANTYQE------TYKRISRVEFTFPDFVTEGAR---DLISRLLKHNPSQRPMLREVLE 254
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.3 bits (236), Expect = 3e-22
Identities = 58/265 (21%), Positives = 94/265 (35%), Gaps = 36/265 (13%)
Query: 467 LPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCY-NRHQAYLLYDY 522
T TV+VK ++ GAT ++SE I H N++ LLG C ++ ++
Sbjct: 40 TATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEF 99
Query: 523 LPNGNLSEKIRTKR------------------DWAAKYKIVLGVARGLCFLHHDCYPAIP 564
GNLS +R+KR VA+G+ FL
Sbjct: 100 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCI 156
Query: 565 HGDLKASNIVFDENMEPHLAEFGF-KYLTQLADGSFPAKIAWTESGEFYNAMKEEMY--- 620
H DL A NI+ E + +FG + + + D + + +Y
Sbjct: 157 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 216
Query: 621 MDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 680
DV+ FG ++ EI + G G + + L ++ +
Sbjct: 217 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM-------YQT 269
Query: 681 ALLCTRSTPSDRPSMEEALKLLSGL 705
L C PS RP+ E ++ L L
Sbjct: 270 MLDCWHGEPSQRPTFSELVEHLGNL 294
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 97.0 bits (240), Expect = 4e-22
Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 16/206 (7%)
Query: 122 FNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181
LT+L SL + N S P GI + NL L N ++ L +L L+LA
Sbjct: 194 AKLTNLESLIATNNQISDITPLGILT--NLDELSLNGNQLKD--IGTLASLTNLTDLDLA 249
Query: 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQL 241
+ S P L L L N +++ P L L +T++E+ N + P
Sbjct: 250 NNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISPIS- 304
Query: 242 GNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLS 301
N+ + YL + N+S P +S+LTKL+ LF N+++ + +T + L
Sbjct: 305 -NLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD--VSSLANLTNINWLSAG 359
Query: 302 DNRLSGPIPESFADLKNLRLLSLMYN 327
N++S P A+L + L L
Sbjct: 360 HNQISDLTP--LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 83.1 bits (204), Expect = 1e-17
Identities = 49/206 (23%), Positives = 84/206 (40%), Gaps = 16/206 (7%)
Query: 170 SQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIG 229
++L +L+ L + S P +L+ L L GN L D L L +T +++
Sbjct: 194 AKLTNLESLIATNNQISDITPLGI--LTNLDELSLNGNQLKD--IGTLASLTNLTDLDLA 249
Query: 230 YNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEF 289
N P L ++++ L + +S P L+ LT L +L L NQ +
Sbjct: 250 NNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQ--LEDISPI 303
Query: 290 SRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIW 349
S + L L L N +S P + L L+ L N++S SL L ++ L
Sbjct: 304 SNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD--VSSLANLTNINWLSAG 359
Query: 350 NNYFSGSLPENLGRNSKLRWVDVSTN 375
+N S P L +++ + ++
Sbjct: 360 HNQISDLTP--LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 75.8 bits (185), Expect = 3e-15
Identities = 65/317 (20%), Positives = 107/317 (33%), Gaps = 45/317 (14%)
Query: 99 FFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFS 158
+ N L +N S+N + P + NLT L+ + ++ N + P + L L
Sbjct: 64 YLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQ 121
Query: 159 NSFSGSVPA------------EISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAG 206
+ + IS + L L G + +L L
Sbjct: 122 ITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLD 181
Query: 207 NLLNDQIPAEL-GMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKEL 265
N + L + + N P ++ + L + G L L
Sbjct: 182 ISSNKVSDISVLAKLTNLESLIATNNQISDITPLG--ILTNLDELSLNGNQLKD--IGTL 237
Query: 266 SNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIP--------------- 310
++LT L L L NQ++ P S +T L L L N++S P
Sbjct: 238 ASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNEN 295
Query: 311 -----ESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNS 365
++LKNL L+L +N +S P + L L+ LF NN S +L +
Sbjct: 296 QLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD--VSSLANLT 351
Query: 366 KLRWVDVSTNNFNGSIP 382
+ W+ N + P
Sbjct: 352 NINWLSAGHNQISDLTP 368
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 69.3 bits (168), Expect = 4e-13
Identities = 54/288 (18%), Positives = 98/288 (34%), Gaps = 23/288 (7%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
E + L + + V +L + +L R G++ L NL ++ +N
Sbjct: 21 LAEKMKTVLGKTNVTD--TVSQTDLDQVTTLQADRLGIKS--IDGVEYLNNLTQINFSNN 76
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ P + L L + + + + P L +
Sbjct: 77 QLTDITP--LKNLTKLVDILMNNNQIADITPLAN---------LTNLTGLTLFNNQITDI 125
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
+ N + +S + L + K L+NLT LE L + N
Sbjct: 126 DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSN 185
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339
+ +++T L+SL ++N++S P NL LSL N++ +L
Sbjct: 186 K--VSDISVLAKLTNLESLIATNNQISDITPLGIL--TNLDELSLNGNQLKD--IGTLAS 239
Query: 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICS 387
L +L L + NN S P L +KL + + N + P +
Sbjct: 240 LTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLT 285
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 68.5 bits (166), Expect = 6e-13
Identities = 57/362 (15%), Positives = 112/362 (30%), Gaps = 53/362 (14%)
Query: 77 VVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHN---SFSGQFPVEIFNLTSLISLDIS 133
+ L ++ + L +++ L S G + L +L ++ S
Sbjct: 24 KMKTVLGKTNVTDTVSQTDL----DQVTTLQADRLGIKSIDG-----VEYLNNLTQINFS 74
Query: 134 RNNFSGHFP-GGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQ 192
N + P + L ++L+ + + L + + +
Sbjct: 75 NNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNL 134
Query: 193 FGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGN--------- 243
S + L +L VT ++ N N
Sbjct: 135 NRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLA 194
Query: 244 -MSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSD 302
++ ++ L +S P LT L+ L L NQL + +T L LDL++
Sbjct: 195 KLTNLESLIATNNQISDITPLG--ILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 250
Query: 303 NRLSGPIPESFADLKNLRLLSLMYNEMSGTVP--------------------ESLVQLPS 342
N++S P + L L L L N++S P + L +
Sbjct: 251 NQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKN 308
Query: 343 LEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFT 402
L L ++ N S P + +KL+ + + N + + + + L N +
Sbjct: 309 LTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD--VSSLANLTNINWLSAGHNQIS 364
Query: 403 GI 404
+
Sbjct: 365 DL 366
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 58.1 bits (139), Expect = 1e-09
Identities = 29/148 (19%), Positives = 50/148 (33%), Gaps = 12/148 (8%)
Query: 60 IYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPV 119
+ S + T + + L +S P L N ++ N +
Sbjct: 248 LANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDIS------ 301
Query: 120 EIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179
I NL +L L + NN S P + SL L L +N S + ++ L ++ L+
Sbjct: 302 PISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD--VSSLANLTNINWLS 357
Query: 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGN 207
+ S P + + L L
Sbjct: 358 AGHNQISDLTP--LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 38.8 bits (89), Expect = 0.002
Identities = 13/87 (14%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Query: 243 NMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSD 302
++E + N++ ++ + ++L ++ +L R + + + L ++ S+
Sbjct: 20 ALAEKMKTVLGKTNVTDTVSQ--TDLDQVTTLQADRLGI--KSIDGVEYLNNLTQINFSN 75
Query: 303 NRLSGPIPESFADLKNLRLLSLMYNEM 329
N+L+ P +L L + + N++
Sbjct: 76 NQLTDITP--LKNLTKLVDILMNNNQI 100
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.3 bits (234), Expect = 5e-22
Identities = 47/249 (18%), Positives = 85/249 (34%), Gaps = 33/249 (13%)
Query: 469 TGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCY----NRHQAYLLYD 521
T + V+ +++ F ++H N++R + L+ +
Sbjct: 33 TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 92
Query: 522 YLPNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNI-VFDEN 578
+ +G L ++ + + +GL FLH P I H DLK NI +
Sbjct: 93 LMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPP-IIHRDLKCDNIFITGPT 151
Query: 579 MEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM-------DVYGFGEIIL 631
+ + G L L SF + T M EMY DVY FG +L
Sbjct: 152 GSVKIGDLG---LATLKRASFAKAVIGT-----PEFMAPEMYEEKYDESVDVYAFGMCML 203
Query: 632 EILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSD 691
E+ T + + + + + + E+K ++ C R +
Sbjct: 204 EMAT-SEYPYSECQNAAQIYRRVTSGVKPASFDKVAI---PEVK---EIIEGCIRQNKDE 256
Query: 692 RPSMEEALK 700
R S+++ L
Sbjct: 257 RYSIKDLLN 265
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.5 bits (232), Expect = 1e-21
Identities = 42/239 (17%), Positives = 94/239 (39%), Gaps = 16/239 (6%)
Query: 467 LPTGITVSVKKIEWG-ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525
+ TG V+++++ + +++ I + ++ N++ L + +++ +YL
Sbjct: 42 VATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 101
Query: 526 GNLSEKI-RTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 584
G+L++ + T D + + L FLH + + H D+K+ NI+ + L
Sbjct: 102 GSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLT 158
Query: 585 EFGF--KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNA 642
+FGF + + + S + + E +D++ G + +E++ G
Sbjct: 159 DFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE-GEPPYL 217
Query: 643 GSSLQNKPIDGLLGEMYNEN-EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700
+ P+ L N E+ + L + D C R S +E L+
Sbjct: 218 NEN----PLRALYLIATNGTPELQNPEKLSAIFR---DFLNRCLDMDVEKRGSAKELLQ 269
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 94.7 bits (235), Expect = 1e-21
Identities = 47/244 (19%), Positives = 88/244 (36%), Gaps = 22/244 (9%)
Query: 467 LPTGITVSVKKI--EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524
TG K I + + + +E I+ + + H LI L ++++ L+ ++L
Sbjct: 51 KATGRVFVAKFINTPYPLDKYTVKNE-ISIMNQLHHPKLINLHDAFEDKYEMVLILEFLS 109
Query: 525 NGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 581
G L ++I + A + GL +H +I H D+K NI+ +
Sbjct: 110 GGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKAS 166
Query: 582 HLAEFGFKYLTQLADGSFPAKIAWT---ESGEFYNAMKEEMYMDVYGFGEIILEILTNGR 638
+ F T+L T + E + Y D++ G + +L+ G
Sbjct: 167 SVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLS-GL 225
Query: 639 LTNAGSSLQN--KPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSME 696
AG + + E + S +D IK +L P R ++
Sbjct: 226 SPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQK-------EPRKRLTVH 278
Query: 697 EALK 700
+AL+
Sbjct: 279 DALE 282
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 92.8 bits (230), Expect = 2e-21
Identities = 53/254 (20%), Positives = 88/254 (34%), Gaps = 29/254 (11%)
Query: 467 LPTGITVSVKKIEWGATRI-------KIVSEFITRIGTVR----HKNLIRLLGFCYNRHQ 515
PT +VK I+ ++ + + +R H N+I+L
Sbjct: 25 KPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTF 84
Query: 516 AYLLYDYLPNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNI 573
+L++D + G L + + K KI+ + +C LH I H DLK NI
Sbjct: 85 FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENI 141
Query: 574 VFDENMEPHLAEFGF-------KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGF 626
+ D++M L +FGF + L ++ E N +D++
Sbjct: 142 LLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWST 201
Query: 627 GEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTR 686
G I+ +L G +L + + N S D V D+
Sbjct: 202 GVIMYTLLA-GSPPFWHRKQML-----MLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLV 255
Query: 687 STPSDRPSMEEALK 700
P R + EEAL
Sbjct: 256 VQPQKRYTAEEALA 269
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.7 bits (222), Expect = 2e-20
Identities = 46/252 (18%), Positives = 81/252 (32%), Gaps = 24/252 (9%)
Query: 467 LPTGITVSVKKIEWGATRIKIVSEFITR----IGTVRHKNLIRLLGFCYNRHQAYLLYDY 522
L T ++K +E + ++TR + + H ++L + + Y Y
Sbjct: 30 LATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 89
Query: 523 LPNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580
NG L + IR D + L +LH I H DLK NI+ +E+M
Sbjct: 90 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMH 146
Query: 581 PHLAEFGFKYLTQLADGSFPAKIAWTESG----EFYNAMKEEMYMDVYGFGEIILEILTN 636
+ +FG + A + E D++ G II +++
Sbjct: 147 IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA- 205
Query: 637 GRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSME 696
G + L+ + + E + + D+ + R E
Sbjct: 206 GLPPFRAGNEY------LIFQKIIKLEYDFPEKFFPKAR---DLVEKLLVLDATKRLGCE 256
Query: 697 EALKLLSGLKPH 708
E LK H
Sbjct: 257 EMEG-YGPLKAH 267
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 88.6 bits (218), Expect = 8e-20
Identities = 53/295 (17%), Positives = 98/295 (33%), Gaps = 28/295 (9%)
Query: 63 CSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIF 122
C V+C+ V +L + L+L +N + +
Sbjct: 10 CHLRVVQCSDLGLEKVPKDLP-----------------PDTALLDLQNNKITEIKDGDFK 52
Query: 123 NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182
NL +L +L + N S PG L L L N L+ L+V
Sbjct: 53 NLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEI 112
Query: 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLG 242
+ + + +E L + +K ++++ I IP G
Sbjct: 113 TKVRKSVFNGLNQMIVVE-LGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQ--G 168
Query: 243 NMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSD 302
+ L + G ++ L L L L L N ++ + L+ L L++
Sbjct: 169 LPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNN 228
Query: 303 NRLSGPIPESFADLKNLRLLSLMYNEMSG------TVPESLVQLPSLEILFIWNN 351
N+L +P AD K ++++ L N +S P + S + +++N
Sbjct: 229 NKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSN 282
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 88.2 bits (217), Expect = 1e-19
Identities = 56/275 (20%), Positives = 90/275 (32%), Gaps = 8/275 (2%)
Query: 126 SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYF 185
L + S P + + +LD +N + + L++L L L +
Sbjct: 11 HLRVVQCSDLGLE-KVPKDLPP--DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKI 67
Query: 186 SGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMS 245
S P F LE L+L+ N L + +P ++ + + N
Sbjct: 68 SKISPGAFAPLVKLERLYLSKNQLKE-LPEKMPKTLQELRVHENEITKVRKSVFNGLNQM 126
Query: 246 EVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRL 305
V L SG + KL + + + L L L N++
Sbjct: 127 IVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPS---LTELHLDGNKI 183
Query: 306 SGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNS 365
+ S L NL L L +N +S SL P L L + NN P L +
Sbjct: 184 TKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKV-PGGLADHK 242
Query: 366 KLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNN 400
++ V + NN + D C G K +S
Sbjct: 243 YIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGV 277
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 70.5 bits (171), Expect = 8e-14
Identities = 37/184 (20%), Positives = 68/184 (36%), Gaps = 4/184 (2%)
Query: 245 SEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNR 304
+ LD+ ++ + NL L +L L N+++ P F+ + L+ L LS N+
Sbjct: 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 90
Query: 305 LSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN 364
L + L+ LR+ ++ +V L Q+ +E L SG
Sbjct: 91 LKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVE-LGTNPLKSSGIENGAFQGM 149
Query: 365 SKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIVMFIAAALLGIFFFRRGGKG 424
KL ++ ++ N +IP + L +L L N T + L +
Sbjct: 150 KKLSYIRIADTNIT-TIPQGLPPS--LTELHLDGNKITKVDAASLKGLNNLAKLGLSFNS 206
Query: 425 HWKM 428
+
Sbjct: 207 ISAV 210
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 87.5 bits (216), Expect = 4e-19
Identities = 33/249 (13%), Positives = 80/249 (32%), Gaps = 25/249 (10%)
Query: 467 LPTGITVSVKKI-------EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519
TG ++K + + G T ++ + T ++ + + + +
Sbjct: 26 ADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI 85
Query: 520 YDYLPNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 577
D + G+L + A + GL +H+ + + DLK +NI+ DE
Sbjct: 86 LDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDE 142
Query: 578 NMEPHLAEFGF-KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTN 636
+ +++ G ++ + + + + D + G ++ ++L
Sbjct: 143 HGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 202
Query: 637 GRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSM- 695
+ ID + M E S L+ ++ +L + R
Sbjct: 203 HSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR-------DVNRRLGCL 255
Query: 696 ----EEALK 700
+E +
Sbjct: 256 GRGAQEVKE 264
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 83.4 bits (205), Expect = 3e-18
Identities = 46/266 (17%), Positives = 96/266 (36%), Gaps = 32/266 (12%)
Query: 463 CKAVLPTGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLL 519
KA G T ++KKI I S I I ++H N+++L + + + L+
Sbjct: 19 YKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLV 78
Query: 520 YDYLPNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 577
+++L + + +L + G+ + H + H DLK N++ +
Sbjct: 79 FEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINR 135
Query: 578 NMEPHLAEFGFKYLTQLADGSFPAKIAWT---ESGEFYNAMKEEMYMDVYGFGEIILEIL 634
E +A+FG + + +I + K +D++ G I E++
Sbjct: 136 EGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMV 195
Query: 635 TNGRLTNAGSSLQN--KPIDGLLGEMYNENEVGSSSSLQDEIKL---------------- 676
G G S + I +LG ++N + + +
Sbjct: 196 N-GTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLD 254
Query: 677 --VLDVALLCTRSTPSDRPSMEEALK 700
+D+ + P+ R + ++AL+
Sbjct: 255 ESGIDLLSKMLKLDPNQRITAKQALE 280
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 83.2 bits (205), Expect = 5e-18
Identities = 44/243 (18%), Positives = 81/243 (33%), Gaps = 22/243 (9%)
Query: 467 LPTGITVSVKKIEWGATRIK-----IVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521
T ++K ++ + + E H L + + + + +
Sbjct: 24 KKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVME 83
Query: 522 YLPNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM 579
YL G+L I++ D + + GL FLH I + DLK NI+ D++
Sbjct: 84 YLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDG 140
Query: 580 EPHLAEFGFKYLTQLADGSFPAKI--AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNG 637
+A+FG L D + E K +D + FG ++ E+L G
Sbjct: 141 HIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLI-G 199
Query: 638 RLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEE 697
+ G + L + L+ E K D+ + P R +
Sbjct: 200 QSPFHGQDEEE------LFHSIRMDNPFYPRWLEKEAK---DLLVKLFVREPEKRLGVRG 250
Query: 698 ALK 700
++
Sbjct: 251 DIR 253
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 83.2 bits (205), Expect = 6e-18
Identities = 35/247 (14%), Positives = 86/247 (34%), Gaps = 22/247 (8%)
Query: 467 LPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA----YLLYDY 522
T ++K ++ K E + +++R++ N + ++ +
Sbjct: 34 KRTQEKFALKMLQ---DCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMEC 90
Query: 523 LPNGNLSEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN 578
L G L +I+ + +I+ + + +LH I H D+K N+++
Sbjct: 91 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSK 147
Query: 579 MEPHLAEFG-FKYLTQLADGSFPAKIAWTE---SGEFYNAMKEEMYMDVYGFGEIILEIL 634
+ + F + + + +T + E K + D++ G I+ +L
Sbjct: 148 RPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 207
Query: 635 TNGRLTNAGSSLQNKP-IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRP 693
+ L P + + E S + +E+K + ++ P+ R
Sbjct: 208 CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK---MLIRNLLKTEPTQRM 264
Query: 694 SMEEALK 700
++ E +
Sbjct: 265 TITEFMN 271
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 82.3 bits (202), Expect = 8e-18
Identities = 46/260 (17%), Positives = 89/260 (34%), Gaps = 27/260 (10%)
Query: 467 LPTGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYL 523
T V++K++ + S + I ++HKN++RL ++ + L++++
Sbjct: 24 RETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83
Query: 524 PNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 583
D + + + + L L + H DLK N++ + N E L
Sbjct: 84 DQDLKKYFDSCNGDLDPE-IVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKL 142
Query: 584 AEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMY---MDVYGFGEIILEILTNGRLT 640
A FG + + A++ ++Y +D++ G I E+ GR
Sbjct: 143 ANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
Query: 641 NAGSSLQN----------KPIDGLLGEMYNENEVGSSSSLQDEIKLV----------LDV 680
G+ + + P + M + LV D+
Sbjct: 203 FPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDL 262
Query: 681 ALLCTRSTPSDRPSMEEALK 700
+ P R S EEAL+
Sbjct: 263 LQNLLKCNPVQRISAEEALQ 282
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 82.1 bits (202), Expect = 1e-17
Identities = 48/249 (19%), Positives = 97/249 (38%), Gaps = 25/249 (10%)
Query: 467 LPTGITVSVKKI--------EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518
TG+ + K I G +R I E ++ + ++H N+I L N+ L
Sbjct: 32 KSTGLQYAAKFIKKRRTKSSRRGVSREDIERE-VSILKEIQHPNVITLHEVYENKTDVIL 90
Query: 519 LYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN 578
+ + + G L + + K + + + L +++ I H DLK NI+ +
Sbjct: 91 ILELVAGGELFDFLAEKESLTEEEATEF-LKQILNGVYYLHSLQIAHFDLKPENIMLLDR 149
Query: 579 --MEPHLAEFGFKYLTQLADGSFPAKIAWTE---SGEFYNAMKEEMYMDVYGFGEIILEI 633
+P + F ++ G+ I T + E N + D++ G I +
Sbjct: 150 NVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 209
Query: 634 LTNGRLTNAGSSLQN--KPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSD 691
L+ G G + Q + + E +E +S+ +D I+ +L P
Sbjct: 210 LS-GASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK-------DPKK 261
Query: 692 RPSMEEALK 700
R +++++L+
Sbjct: 262 RMTIQDSLQ 270
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 81.8 bits (200), Expect = 1e-17
Identities = 51/241 (21%), Positives = 88/241 (36%), Gaps = 4/241 (1%)
Query: 164 SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV 223
+VP I + + L G+ S + F + ++L L L N+L A L +
Sbjct: 25 AVPVGIPA--ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALL 82
Query: 224 THMEIGYNFYQGNI-PWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLA 282
+++ N ++ P + + L + L P L L+ L+L N L
Sbjct: 83 EQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ 142
Query: 283 GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPS 342
F + L L L NR+S +F L +L L L N ++ P + L
Sbjct: 143 ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGR 202
Query: 343 LEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFT 402
L L+++ N S E L L+++ ++ N + L K S+
Sbjct: 203 LMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLW-AWLQKFRGSSSEVP 261
Query: 403 G 403
Sbjct: 262 C 262
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.7 bits (192), Expect = 1e-16
Identities = 59/280 (21%), Positives = 104/280 (37%), Gaps = 8/280 (2%)
Query: 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS 160
V + PV I + + + N S ++ RNL +L SN
Sbjct: 11 EPKVTTSCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNV 67
Query: 161 FSGSVPAEISQLEHLKVLNLAGSYFSGPI-PSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ A + L L+ L+L+ + + P+ F L LHL L + P
Sbjct: 68 LARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRG 127
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
L + ++ + N Q ++ + +L + G +S + L L+ L L +N
Sbjct: 128 LAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQN 187
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339
++A P F + L +L L N LS E+ A L+ L+ L L N +
Sbjct: 188 RVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCD-CRARPL 246
Query: 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNG 379
L+ ++ SLP+ L + ++ N+ G
Sbjct: 247 WAWLQKFRGSSSEVPCSLPQRL---AGRDLKRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.3 bits (113), Expect = 1e-06
Identities = 29/161 (18%), Positives = 49/161 (30%), Gaps = 4/161 (2%)
Query: 99 FFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFS 158
L L L N+ +L +L L + N S + L +L L
Sbjct: 127 GLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQ 186
Query: 159 NSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG 218
N + P L L L L + S ++L++L L N A
Sbjct: 187 NRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA-RP 245
Query: 219 MLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259
+ + + ++P +L +A +L G
Sbjct: 246 LWAWLQKFRGSSSEVPCSLPQRLAGRD---LKRLAANDLQG 283
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 80.5 bits (198), Expect = 4e-17
Identities = 41/242 (16%), Positives = 78/242 (32%), Gaps = 17/242 (7%)
Query: 467 LPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 523
T V++K I A + +E I + ++H N++ L + YL+ +
Sbjct: 31 KRTQKLVAIKCIAKKALEGKEGSMENE-IAVLHKIKHPNIVALDDIYESGGHLYLIMQLV 89
Query: 524 PNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 581
G L ++I K +++ V + +LH DE+ +
Sbjct: 90 SGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKI 149
Query: 582 HLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMY---MDVYGFGEIILEILTNGR 638
+++FG GS + T + ++ Y +D + G I +L G
Sbjct: 150 MISDFGL--SKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC-GY 206
Query: 639 LTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEA 698
+ L ++ S D D P R + E+A
Sbjct: 207 PPFYDENDAK-----LFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQA 261
Query: 699 LK 700
L+
Sbjct: 262 LQ 263
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 80.5 bits (198), Expect = 4e-17
Identities = 43/238 (18%), Positives = 85/238 (35%), Gaps = 11/238 (4%)
Query: 467 LPTGITVSVKKIE-WGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDY 522
G ++K ++ R+K V V H +IR+ G + Q +++ DY
Sbjct: 26 RHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDY 85
Query: 523 LPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 582
+ G L +R + + A L + I + DLK NI+ D+N
Sbjct: 86 IEGGELFSLLRKSQRFPNPVAKFY-AAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIK 144
Query: 583 LAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNA 642
+ +FGF + + + E + +D + FG +I E+L G
Sbjct: 145 ITDFGFAKYVPDVTYTLCGTPDYI-APEVVSTKPYNKSIDWWSFGILIYEMLA-GYTPFY 202
Query: 643 GSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700
S+ L E+ + ++D + ++ L ++ + + E+
Sbjct: 203 DSNTMKTYEKILNAELRFPPFF--NEDVKDLLSRLITRDL--SQRLGNLQNGTEDVKN 256
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 77.5 bits (190), Expect = 3e-16
Identities = 42/249 (16%), Positives = 82/249 (32%), Gaps = 24/249 (9%)
Query: 467 LPTGITVSVKKIEWGATRIKIVSEFITR----IGTVRHKNLIRLLGFCYNRHQA----YL 518
L V+VK + R R + H ++ + A Y+
Sbjct: 29 LRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 88
Query: 519 LYDYLPNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD 576
+ +Y+ L + + T+ +++ + L F H + I H D+K +NI+
Sbjct: 89 VMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMIS 145
Query: 577 ENMEPHLAEFGF-----KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIIL 631
+ +FG + + A S E + DVY G ++
Sbjct: 146 ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 205
Query: 632 EILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSD 691
E+LT G G S + + + E+ + S+ + + V L P +
Sbjct: 206 EVLT-GEPPFTGDSPVS-----VAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPEN 259
Query: 692 RPSMEEALK 700
R ++
Sbjct: 260 RYQTAAEMR 268
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.4 bits (187), Expect = 9e-16
Identities = 52/261 (19%), Positives = 92/261 (35%), Gaps = 32/261 (12%)
Query: 469 TGITVSVKKIEWG---ATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDY 522
T V++KKI+ G + I + I + H N+I LL ++ L++D+
Sbjct: 22 TNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF 81
Query: 523 LPNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580
+ + +L +GL +LH I H DLK +N++ DEN
Sbjct: 82 METDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGV 138
Query: 581 PHLAEFGF--KYLTQLADGSFPAKIAWTESGEFYNAMKEEMY-MDVYGFGEIILEILTNG 637
LA+FG + + + W + E + +D++ G I+ E+L
Sbjct: 139 LKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRV 198
Query: 638 RLTNAGSSLQ---------NKPIDGLLGEMYNENEVGSSSSLQDEI---------KLVLD 679
S L P + +M + + + S +LD
Sbjct: 199 PFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLD 258
Query: 680 VALLCTRSTPSDRPSMEEALK 700
+ P R + +ALK
Sbjct: 259 LIQGLFLFNPCARITATQALK 279
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.8 bits (188), Expect = 1e-15
Identities = 48/276 (17%), Positives = 93/276 (33%), Gaps = 44/276 (15%)
Query: 463 CKAV-LPTGITVSVKKI---EWGATRIKIVSEFITRIGTVRHKNLIRLLGFC----YNRH 514
C A + V++KKI E + + E I + RH+N+I + +
Sbjct: 25 CSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDIIRAPTIEQM 83
Query: 515 QAYLLYDYLPNGNLSEKIRTKR-DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNI 573
+ L +L +L + ++T+ + + RGL ++H + H DLK SN+
Sbjct: 84 KDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNL 140
Query: 574 VFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM--------DVYG 625
+ + + + +FG + E M D++
Sbjct: 141 LLNTTCDLKICDFGLA--RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 198
Query: 626 FGEIILEILTNGRLTNAGS---------------------SLQNKPIDGLLGEMYNENEV 664
G I+ E+L+N + + N L + ++N+V
Sbjct: 199 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 258
Query: 665 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700
+ + LD+ P R +E+AL
Sbjct: 259 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 294
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.3 bits (184), Expect = 2e-15
Identities = 45/270 (16%), Positives = 88/270 (32%), Gaps = 35/270 (12%)
Query: 463 CKAVLPTGITVSVKKIEWGATRIKIVSEFIT------RIGTVRHKNLIRLLGFCYNRHQA 516
+ + G V++K++ + I + T H N++RL C
Sbjct: 26 ARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 85
Query: 517 -----YLLYDYLPNGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDL 568
L+++++ + + ++ + RGL FLH + H DL
Sbjct: 86 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDL 142
Query: 569 KASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKI-AWTESGEFYNAMKEEMYMDVYGFG 627
K NI+ + + LA+FG + + W + E +D++ G
Sbjct: 143 KPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVG 202
Query: 628 EIILEILTNGRLTNAGSSLQ-----------------NKPIDGLLGEMYNENEVGSSSSL 670
I E+ L S + + + ++++ +
Sbjct: 203 CIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFV 262
Query: 671 QDEIKLVLDVALLCTRSTPSDRPSMEEALK 700
D +L D+ L C P+ R S AL
Sbjct: 263 TDIDELGKDLLLKCLTFNPAKRISAYSALS 292
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.9 bits (178), Expect = 2e-14
Identities = 47/271 (17%), Positives = 89/271 (32%), Gaps = 47/271 (17%)
Query: 467 LPTGITVSVKKIEWGATRIKIVSEFITR----IGTVRHKNLIRLLGFCYNRHQA------ 516
+G V++KK+ F R + + H N++RL F Y+ +
Sbjct: 42 CDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 94
Query: 517 YLLYDYLPNGNLSEKIRTKR-----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKAS 571
L+ DY+P R + + R L ++H I H D+K
Sbjct: 95 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQ 151
Query: 572 NIVFDENMEPH-LAEFGF--KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGE 628
N++ D + L +FG + + + S+ + + A +DV+ G
Sbjct: 152 NLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGC 211
Query: 629 IILEILTNGRLTNAGSSL-QNKPIDGLLGEMYNENEVGSSSSLQDEI------------- 674
++ E+L + S + Q I +LG E + + +
Sbjct: 212 VLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVF 271
Query: 675 -----KLVLDVALLCTRSTPSDRPSMEEALK 700
+ + TP+ R + EA
Sbjct: 272 RPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.2 bits (176), Expect = 2e-14
Identities = 47/277 (16%), Positives = 96/277 (34%), Gaps = 47/277 (16%)
Query: 467 LPTGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCY--------NRHQ 515
TG V++KK+ + + I ++H+N++ L+ C +
Sbjct: 32 RKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGS 91
Query: 516 AYLLYDYLPNGNLSE--KIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNI 573
YL++D+ + + K + +++ + GL ++H + I H D+KA+N+
Sbjct: 92 IYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANV 148
Query: 574 VFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMY--------MDVYG 625
+ + LA+FG LA S P + E + +D++G
Sbjct: 149 LITRDGVLKLADFGLARAFSLAKNSQP-NRYTNRVVTLWYRPPELLLGERDYGPPIDLWG 207
Query: 626 FGEIILEILTNGRLTNAGSSLQ--NKPIDGLLGEMYNENEVGSSSSLQDEIKLV------ 677
G I+ E+ T + + + L ++++LV
Sbjct: 208 AGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRK 267
Query: 678 --------------LDVALLCTRSTPSDRPSMEEALK 700
LD+ P+ R ++AL
Sbjct: 268 VKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 304
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 72.2 bits (176), Expect = 2e-14
Identities = 27/252 (10%), Positives = 64/252 (25%), Gaps = 23/252 (9%)
Query: 467 LPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526
+ G V++K ++ E ++ I + +C ++ L
Sbjct: 29 IAAGEEVAIKLECVKTKHPQLHIE-SKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGP 87
Query: 527 NLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF-DENMEPH 582
+L + + + + ++H H D+K N +
Sbjct: 88 SLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNL 144
Query: 583 LAEFGFKYLTQLADGSFPAKIAWTESG-----------EFYNAMKEEMYMDVYGFGEIIL 631
+ F + D I + E+ + +++ D+ G +++
Sbjct: 145 VYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLM 204
Query: 632 EILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI-KLVLDVALLCTRSTPS 690
G L L+ + + L C
Sbjct: 205 YFNL-GSLPW--QGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFD 261
Query: 691 DRPSMEEALKLL 702
D+P +L
Sbjct: 262 DKPDYSYLRQLF 273
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.7 bits (172), Expect = 7e-14
Identities = 47/262 (17%), Positives = 86/262 (32%), Gaps = 31/262 (11%)
Query: 467 LPTGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDYL 523
TG V++KKI + S I I + H N+++LL + ++ YL++++L
Sbjct: 24 KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 83
Query: 524 PNGNLS---EKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580
T + + +GL F H + H DLK N++ +
Sbjct: 84 HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA 140
Query: 581 PHLAEFGF--KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM-DVYGFGEIILEILTNG 637
LA+FG + + + W + E K D++ G I E++T
Sbjct: 141 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 638 RLTNAGSSLQ---------NKPIDGLLGEMYNENEVGSSSSLQDEIKL----------VL 678
L S + P + + + + + S
Sbjct: 201 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 260
Query: 679 DVALLCTRSTPSDRPSMEEALK 700
+ P+ R S + AL
Sbjct: 261 SLLSQMLHYDPNKRISAKAALA 282
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.6 bits (172), Expect = 1e-13
Identities = 47/269 (17%), Positives = 86/269 (31%), Gaps = 34/269 (12%)
Query: 463 CKAV-LPTGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQA-- 516
C AV TG V++KK+ + +RH+N+I LL
Sbjct: 35 CSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDD 94
Query: 517 ----YLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASN 572
YL+ ++ K +V + +GL ++H H DLK N
Sbjct: 95 FTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGII---HRDLKPGN 151
Query: 573 IVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILE 632
+ +E+ E + +FG + + N M+ +D++ G I+ E
Sbjct: 152 LAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAE 211
Query: 633 ILTNGRLTNAGS---------------------SLQNKPIDGLLGEMYNENEVGSSSSLQ 671
++T L LQ+ + + + +S L
Sbjct: 212 MITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILT 271
Query: 672 DEIKLVLDVALLCTRSTPSDRPSMEEALK 700
+ L +++ R + EAL
Sbjct: 272 NASPLAVNLLEKMLVLDAEQRVTAGEALA 300
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.6 bits (167), Expect = 2e-13
Identities = 36/248 (14%), Positives = 71/248 (28%), Gaps = 33/248 (13%)
Query: 467 LPTGITVSVKKIE----WGATRIKIVSEFITRIGTVR-----HKNLIRLLGFCYNRHQAY 517
+ + V++K +E + + + ++ +IRLL +
Sbjct: 26 VSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFV 85
Query: 518 LLYDYLPNGNLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIV 574
L+ + T+R V + H+ + H D+K NI+
Sbjct: 86 LILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENIL 142
Query: 575 FDEN-MEPHLAEFGF-KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILE 632
D N E L +FG L F ++ V+ G ++ +
Sbjct: 143 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 202
Query: 633 ILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDR 692
++ + + + E + + C PSDR
Sbjct: 203 MVCGDIPFEHDEEIIRGQVF-------------FRQRVSSECQ---HLIRWCLALRPSDR 246
Query: 693 PSMEEALK 700
P+ EE
Sbjct: 247 PTFEEIQN 254
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.5 bits (169), Expect = 2e-13
Identities = 47/265 (17%), Positives = 93/265 (35%), Gaps = 35/265 (13%)
Query: 467 LPTGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQA-----YL 518
TG+ V+VKK+ I + ++H+N+I LL
Sbjct: 40 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 99
Query: 519 LYDYLPNGNLSEKIRTKR-DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 577
L +L +L+ ++ ++ ++ + RGL ++H H DLK SN+ +E
Sbjct: 100 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAVNE 156
Query: 578 NMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNG 637
+ E + +FG T + A + N M +D++ G I+ E+LT G
Sbjct: 157 DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-G 215
Query: 638 RLTNAGSS----------------------LQNKPIDGLLGEMYNENEVGSSSSLQDEIK 675
R G+ + ++ + + ++ ++
Sbjct: 216 RTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANP 275
Query: 676 LVLDVALLCTRSTPSDRPSMEEALK 700
L +D+ R + +AL
Sbjct: 276 LAVDLLEKMLVLDSDKRITAAQALA 300
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.6 bits (166), Expect = 3e-13
Identities = 37/286 (12%), Positives = 78/286 (27%), Gaps = 26/286 (9%)
Query: 80 INLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG 139
++L+ K L + G R+ ++ + E F+ + +D+S +
Sbjct: 5 LDLTGKNLHPDVTG---RLLSQGVIAFRCPRSFMDQPLA-EHFSPFRVQHMDLSNSVIEV 60
Query: 140 -HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKS 198
G + L L S + +++ +L LN
Sbjct: 61 STLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN----------------LSG 104
Query: 199 LEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLD-IAGANL 257
+ L L + Q + ++++
Sbjct: 105 CSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQK 164
Query: 258 SGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSD-NRLSGPIPESFADL 316
S + L EF ++ L+ L LS + ++
Sbjct: 165 SDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEI 224
Query: 317 KNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLG 362
L+ L + GT+ LP L+I ++F+ +G
Sbjct: 225 PTLKTLQVFGIVPDGTLQLLKEALPHLQIN---CSHFTTIARPTIG 267
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.4 bits (155), Expect = 8e-12
Identities = 45/268 (16%), Positives = 93/268 (34%), Gaps = 16/268 (5%)
Query: 129 SLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSG- 187
+LD++ N G + S + ++ + + S ++ ++L+ S
Sbjct: 4 TLDLTGKNLHPDVTGRLLS-QGVIAFRCPRSFMDQPLAEHFSPF-RVQHMDLSNSVIEVS 61
Query: 188 PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQ------- 240
+ L+ L L G L+D I L + + + Q
Sbjct: 62 TLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCS 121
Query: 241 -LGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLD 299
L ++ D ++ ++ +T+L +N + R L LD
Sbjct: 122 RLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLD 181
Query: 300 LSDNRL-SGPIPESFADLKNLRLLSLMY-NEMSGTVPESLVQLPSLEILFIWNNYFSGSL 357
LSD+ + + F L L+ LSL ++ L ++P+L+ L ++ G+L
Sbjct: 182 LSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTL 241
Query: 358 PENLGRNSKLRWVDVSTNNFNGSIPPDI 385
L + ++ ++F P I
Sbjct: 242 QLLK---EALPHLQINCSHFTTIARPTI 266
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.0 bits (136), Expect = 2e-09
Identities = 21/107 (19%), Positives = 44/107 (41%), Gaps = 3/107 (2%)
Query: 248 QYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG 307
Q LD+ G NL + L + + + R+ + + FS ++ +DLS++ +
Sbjct: 3 QTLDLTGKNLHPDVTGRLLSQ-GVIAFRCPRSFMDQPLAEHFSP-FRVQHMDLSNSVIEV 60
Query: 308 -PIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYF 353
+ + L+ LSL +S + +L + +L L +
Sbjct: 61 STLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSG 107
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.7 bits (135), Expect = 2e-09
Identities = 35/261 (13%), Positives = 87/261 (33%), Gaps = 16/261 (6%)
Query: 77 VVGINLSMKGLSGALPGKPLRIFFN--ELVDLNLSHNSFSGQFPVEIF-NLTSLISLDIS 133
++ + + +PL F+ + ++LS++ I + L +L +
Sbjct: 20 LLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLE 79
Query: 134 RNNFSGHFPGGIQSLRNLLVLDAF--SNSFSGSVPAEISQLEHLKVLNLAGSYFSG---- 187
S + NL+ L+ S ++ +S L LNL+ +
Sbjct: 80 GLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHV 139
Query: 188 --PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGN-IPWQLGNM 244
+ + L NL + + + H+++ + N + +
Sbjct: 140 QVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQL 199
Query: 245 SEVQYLDIAGAN-LSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDN 303
+ +Q+L ++ + EL + L++L +F G + L L ++ +
Sbjct: 200 NYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEA---LPHLQINCS 256
Query: 304 RLSGPIPESFADLKNLRLLSL 324
+ + + KN + +
Sbjct: 257 HFTTIARPTIGNKKNQEIWGI 277
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 66.7 bits (161), Expect = 1e-12
Identities = 37/210 (17%), Positives = 76/210 (36%), Gaps = 9/210 (4%)
Query: 145 IQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHL 204
+ + + L ++ + + ++P ++ + +L+L+ + + + L L+L
Sbjct: 6 VSKVASHLEVNCDKRNLT-ALPPDLPK--DTTILHLSENLLYTFSLATLMPYTRLTQLNL 62
Query: 205 AG-NLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPK 263
L Q+ L +L T+ + L+
Sbjct: 63 DRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFN----RLTSLPLG 118
Query: 264 ELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLS 323
L L +L+ L+L N+L P + L+ L L++N L+ L+NL L
Sbjct: 119 ALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLL 178
Query: 324 LMYNEMSGTVPESLVQLPSLEILFIWNNYF 353
L N + T+P+ L F+ N +
Sbjct: 179 LQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.7 bits (143), Expect = 2e-10
Identities = 35/209 (16%), Positives = 59/209 (28%), Gaps = 9/209 (4%)
Query: 120 EIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179
E+ + S + ++ + N + P + ++ +L N A + L LN
Sbjct: 5 EVSKVASHLEVNCDKRNLT-ALPPDL--PKDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPW 239
L G+ L L L+ N L + ++P
Sbjct: 62 L--DRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLG--QTLPALTVLDVSFNRLTSLPL 117
Query: 240 QLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLF-RNQLAGQVPWEFSRVTTLKSL 298
N ++P L T N L + + L +L
Sbjct: 118 GALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTL 177
Query: 299 DLSDNRLSGPIPESFADLKNLRLLSLMYN 327
L +N L IP+ F L L N
Sbjct: 178 LLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.6 bits (140), Expect = 5e-10
Identities = 33/206 (16%), Positives = 63/206 (30%), Gaps = 7/206 (3%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
+++N + + P ++ L +S N + L L+ +
Sbjct: 9 VASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNL--D 63
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ L L L+L+ + L + + L
Sbjct: 64 RAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLG-ALRG 122
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
L + + + N + P L +++ L +A NL+ L+ L L++L L N
Sbjct: 123 LGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQEN 182
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRL 305
L +P F L L N
Sbjct: 183 SLY-TIPKGFFGSHLLPFAFLHGNPW 207
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.5 bits (132), Expect = 6e-09
Identities = 41/210 (19%), Positives = 69/210 (32%), Gaps = 9/210 (4%)
Query: 72 KNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLD 131
+ +N + L+ ALP + L+LS N + T L L+
Sbjct: 7 SKVASHLEVNCDKRNLT-ALP----PDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 132 ISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPS 191
+ R + G +L S++ S+P L L VL+++ + +
Sbjct: 62 LDRAELTKLQVDGTLP---VLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLG 118
Query: 192 QFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLD 251
L+ L+L GN L P L + + + N L + + L
Sbjct: 119 ALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLL 178
Query: 252 IAGANLSGSIPKELSNLTKLESLFLFRNQL 281
+ N +IPK L FL N
Sbjct: 179 LQE-NSLYTIPKGFFGSHLLPFAFLHGNPW 207
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.0 bits (110), Expect = 3e-06
Identities = 43/210 (20%), Positives = 71/210 (33%), Gaps = 7/210 (3%)
Query: 192 QFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLD 251
+ S ++ L +P +L K T + + N L + + L+
Sbjct: 5 EVSKVASHLEVNCDKRNL-TALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 252 IAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPE 311
+ + + L L +L L NQL + D+S NRL+
Sbjct: 62 LD--RAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVL-DVSFNRLTSLPLG 118
Query: 312 SFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVD 371
+ L L+ L L NE+ P L P LE L + NN + L L +
Sbjct: 119 ALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLL 178
Query: 372 VSTNNFNGSIPPDICSGGVLFKLILFSNNF 401
+ N+ +IP +L L N +
Sbjct: 179 LQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 66.8 bits (162), Expect = 2e-12
Identities = 43/273 (15%), Positives = 86/273 (31%), Gaps = 50/273 (18%)
Query: 467 LPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLYDYLP 524
+ V VK ++ + KI E N+I L + L+++++
Sbjct: 57 ITNNEKVVVKILK-PVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVN 115
Query: 525 NGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-ENMEPHL 583
N + + +T D+ + + + + L + H I H D+K N++ D E+ + L
Sbjct: 116 NTDFKQLYQTLTDYDIR-FYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRL 171
Query: 584 AEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM--------DVYGFGEIILEILT 635
++G LA+ P + Y E + D++ G ++ ++
Sbjct: 172 IDWG------LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF 225
Query: 636 NGRLTNAGSS--LQNKPIDGLLGEMYNENEVGSSSSLQDEI------------------- 674
G Q I +LG + + + D
Sbjct: 226 RKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHS 285
Query: 675 -------KLVLDVALLCTRSTPSDRPSMEEALK 700
LD R R + EA++
Sbjct: 286 ENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 318
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 66.4 bits (161), Expect = 2e-12
Identities = 35/240 (14%), Positives = 82/240 (34%), Gaps = 15/240 (6%)
Query: 467 LPTGITVSVKKIE-WGATRIKIVSEFITRI---GTVRHKNLIRLLGFCYNRHQAYLLYDY 522
+G ++K ++ ++K + + V L++L + Y++ +Y
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 523 LPNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580
+ G + +R + +LH + + DLK N++ D+
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGY 179
Query: 581 PHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLT 640
+ +FGF + + E + +D + G +I E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWTLCGTPEALAP-EIILSKGYNKAVDWWALGVLIYEMAA-GYPP 237
Query: 641 NAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700
+ G++ + SS L+D ++ +L V L T+ + + + +
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHF--SSDLKDLLRNLLQVDL--TKRFGNLKNGVNDIKN 293
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.6 bits (159), Expect = 3e-12
Identities = 42/253 (16%), Positives = 80/253 (31%), Gaps = 31/253 (12%)
Query: 468 PTGITVSVKKI--EWGATRIKIVSEFITRIGTVR----HKNLIRLLGFCYNRHQAYLLYD 521
TG ++K + + K T + L+ L + +L+ D
Sbjct: 50 DTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILD 109
Query: 522 YLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 581
Y+ G L + +R+ ++++ + V + L H I + D+K NI+ D N
Sbjct: 110 YINGGELFTHLS-QRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHV 168
Query: 582 HLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYM---------DVYGFGEIILE 632
L +FG + + A+ G + + D + G ++ E
Sbjct: 169 VLTDFGLSKEFV----ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYE 224
Query: 633 ILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDR 692
+LT G +N E+ Q+ L D+ P R
Sbjct: 225 LLT-GASPFTVDGEKN-----SQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKR 278
Query: 693 PSM-----EEALK 700
+E +
Sbjct: 279 LGCGPRDADEIKE 291
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.0 bits (155), Expect = 1e-11
Identities = 37/250 (14%), Positives = 76/250 (30%), Gaps = 32/250 (12%)
Query: 467 LPTGITVSVKKIEWGATRIKIVSEFITR----IGTVRHKNLIRLLGFCYNRHQAYLLYDY 522
TG ++K + K + RH L L + + +Y
Sbjct: 27 KATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEY 86
Query: 523 LPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH 582
G L + + + + A + L + + + D+K N++ D++
Sbjct: 87 ANGGELFFHLS-RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIK 145
Query: 583 LAEFGF-------KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT 635
+ +FG + G+ Y +D +G G ++ E++
Sbjct: 146 ITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRA-----VDWWGLGVVMYEMMC 200
Query: 636 NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSM 695
GRL + L E+ E+ +L E K + + P R
Sbjct: 201 -GRLPFYNQDHER------LFELILMEEIRFPRTLSPEAK---SLLAGLLKKDPKQRLGG 250
Query: 696 -----EEALK 700
+E ++
Sbjct: 251 GPSDAKEVME 260
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 63.3 bits (153), Expect = 2e-11
Identities = 26/256 (10%), Positives = 60/256 (23%), Gaps = 23/256 (8%)
Query: 467 LPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526
L V++K + ++ E+ T + + F L+ D L
Sbjct: 27 LLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPS 86
Query: 527 NLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPH-- 582
R + + +H + + D+K N + +
Sbjct: 87 LEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNAN 143
Query: 583 ---LAEFGFKYLTQLADGSFPAKIAWTESG---------EFYNAMKEEMYMDVYGFGEII 630
+ +FG + ++ + ++ D+ G +
Sbjct: 144 MIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVF 203
Query: 631 LEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI-KLVLDVALLCTRSTP 689
+ L G L G + + + L +
Sbjct: 204 MYFLR-GSLPWQGLKAAT--NKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAF 260
Query: 690 SDRPSMEEALKLLSGL 705
P + L S +
Sbjct: 261 DATPDYDYLQGLFSKV 276
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.3 bits (145), Expect = 2e-10
Identities = 33/179 (18%), Positives = 62/179 (34%), Gaps = 14/179 (7%)
Query: 467 LPTGITVSVKKIEWGATRIKIVSEFITRI---GTVRHKNLIRLLGFC------YNRHQAY 517
V++KK+ + V HKN+I LL Y
Sbjct: 39 AVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY 98
Query: 518 LLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE 577
L+ + + + I+ + D ++ + G+ LH H DLK SNIV
Sbjct: 99 LVMELMDANLC-QVIQMELDHERMSYLLYQMLCGIKHLHSAGII---HRDLKPSNIVVKS 154
Query: 578 NMEPHLAEFGFKYLTQLAD-GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT 635
+ + +FG + + + + E M + +D++ G I+ E++
Sbjct: 155 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 213
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 58.9 bits (141), Expect = 2e-10
Identities = 36/225 (16%), Positives = 75/225 (33%), Gaps = 18/225 (8%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
+ + ++ + V +L + +L + G+Q L NL+ L+ N
Sbjct: 18 LANAIKIAAGKSNVTD--TVTQADLDGITTLSAFGTGVTT--IEGVQYLNNLIGLELKDN 73
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ P + L+ I ++ + L +
Sbjct: 74 QITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 133
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
L + + G Q ++ Q S L+NL+KL +L N
Sbjct: 134 LYLDLNQITNISPLAGLTNLQYLSIGNAQV----------SDLTPLANLSKLTTLKADDN 183
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSL 324
+++ P + + L + L +N++S P A+ NL +++L
Sbjct: 184 KISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTL 224
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 50.8 bits (120), Expect = 1e-07
Identities = 38/218 (17%), Positives = 72/218 (33%), Gaps = 22/218 (10%)
Query: 147 SLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAG 206
+L N + + A ++ + +V + L+ + L+ G+ + +L L L
Sbjct: 17 ALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKD 72
Query: 207 NLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELS 266
N + D P + T + I + + L
Sbjct: 73 NQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQ 132
Query: 267 NLTKLESLFLFRNQLAGQVPWE--------------FSRVTTLKSLDLSDNRLSGPIPES 312
L + + LAG + + ++ L +L DN++S P
Sbjct: 133 VLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP-- 190
Query: 313 FADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWN 350
A L NL + L N++S P L +L I+ + N
Sbjct: 191 LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTN 226
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 50.1 bits (119), Expect = 4e-08
Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 6/105 (5%)
Query: 106 LNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSV 165
L+L+H + + L + LD+S N P + +LR L VL A N+
Sbjct: 3 LHLAHKDLTV--LCHLEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNAL--EN 57
Query: 166 PAEISQLEHLKVLNLAGSYF-SGPIPSQFGSFKSLEFLHLAGNLL 209
++ L L+ L L + S L L+L GN L
Sbjct: 58 VDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSL 102
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 49.7 bits (118), Expect = 5e-08
Identities = 26/125 (20%), Positives = 44/125 (35%), Gaps = 27/125 (21%)
Query: 248 QYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVP--------------------- 286
+ L +A +L+ + L L + L L N+L P
Sbjct: 1 RVLHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENV 58
Query: 287 WEFSRVTTLKSLDLSDNRL-SGPIPESFADLKNLRLLSLMYNEMSG--TVPESLVQ-LPS 342
+ + L+ L L +NRL + L LL+L N + + E L + LPS
Sbjct: 59 DGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPS 118
Query: 343 LEILF 347
+ +
Sbjct: 119 VSSIL 123
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 47.0 bits (111), Expect = 5e-07
Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 6/124 (4%)
Query: 176 KVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG 235
+VL+LA + + + L L+ N L P L L+ + ++ N +
Sbjct: 1 RVLHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNALEN 57
Query: 236 NIPWQLGNMSEVQYLDIAGANL-SGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTT 294
N+ +Q L + L + + L + +L L L N L + +
Sbjct: 58 VDGVA--NLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEM 115
Query: 295 LKSL 298
L S+
Sbjct: 116 LPSV 119
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 43.2 bits (101), Expect = 1e-05
Identities = 23/106 (21%), Positives = 38/106 (35%), Gaps = 4/106 (3%)
Query: 274 LFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTV 333
L L L V ++ + LDLS NRL P + A L+ L +L + V
Sbjct: 3 LHLAHKDL--TVLCHLEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQ-ASDNALENV 58
Query: 334 PESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNG 379
E+L N + + L +L +++ N+
Sbjct: 59 DGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 52.5 bits (124), Expect = 8e-08
Identities = 19/97 (19%), Positives = 33/97 (34%), Gaps = 9/97 (9%)
Query: 225 HMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQ 284
N I ++ L+++ L +P L +L N L +
Sbjct: 264 PNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPPRLERL---IASFNHL-AE 318
Query: 285 VPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRL 321
VP LK L + N L P+ +++LR+
Sbjct: 319 VPELPQN---LKQLHVEYNPLRE-FPDIPESVEDLRM 351
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 46.0 bits (107), Expect = 1e-05
Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 9/94 (9%)
Query: 275 FLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVP 334
+ N + ++ +L+ L++S+N+L +P L L +N ++ VP
Sbjct: 266 LYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVP 320
Query: 335 ESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLR 368
E +L+ L + N P+ LR
Sbjct: 321 EL---PQNLKQLHVEYNPLR-EFPDIPESVEDLR 350
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 43.7 bits (101), Expect = 6e-05
Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 9/77 (11%)
Query: 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFS 162
L +LN+S+N + P L L S N+ + P Q+L+ L N
Sbjct: 286 LEELNVSNNKLI-ELPALPPRLE---RLIASFNHLA-EVPELPQNLK---QLHVEYNPLR 337
Query: 163 GSVPAEISQLEHLKVLN 179
P +E L++ +
Sbjct: 338 -EFPDIPESVEDLRMNS 353
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 43.3 bits (100), Expect = 7e-05
Identities = 19/95 (20%), Positives = 29/95 (30%), Gaps = 9/95 (9%)
Query: 107 NLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVP 166
N+ S + SL L++S N P L L A N + VP
Sbjct: 266 LYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPPRLER---LIASFNHLA-EVP 320
Query: 167 AEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEF 201
L+ L++ + P S + L
Sbjct: 321 ELPQNLKQ---LHVEYNPLRE-FPDIPESVEDLRM 351
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.1 bits (120), Expect = 1e-07
Identities = 31/243 (12%), Positives = 64/243 (26%), Gaps = 17/243 (6%)
Query: 106 LNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSV 165
+ + + P ++ + I L G +L ++ N +
Sbjct: 13 FLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVI 69
Query: 166 PAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLN----DQIPAELGMLK 221
A++ + + +L + + + K
Sbjct: 70 EADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQK 129
Query: 222 TVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQL 281
+ ++ N + +G E L + + + E N L
Sbjct: 130 VLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNL 189
Query: 282 AGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLP 341
F + LD+S R+ +LK LR S +L +LP
Sbjct: 190 EELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST----------YNLKKLP 239
Query: 342 SLE 344
+LE
Sbjct: 240 TLE 242
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.1 bits (89), Expect = 0.001
Identities = 29/224 (12%), Positives = 55/224 (24%), Gaps = 9/224 (4%)
Query: 164 SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV 223
+P+++ + L + F F LE + ++ N + + I A++
Sbjct: 22 EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPK 79
Query: 224 THMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS----GSIPKELSNLTKLESLFLFRN 279
H + + +N + K S L + N
Sbjct: 80 LHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNIN 139
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339
+ L L+ N + +F + L N + +
Sbjct: 140 IHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHG 199
Query: 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPP 383
IL I L KLR +P
Sbjct: 200 ASGPVILDISRTRIHSLPSYGLENLKKLRARS---TYNLKKLPT 240
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 48.2 bits (114), Expect = 6e-07
Identities = 25/139 (17%), Positives = 41/139 (29%), Gaps = 24/139 (17%)
Query: 464 KAVLPTGITVSVKKIEWGATRIKIV-----------SEFITRIGTVRHKNLIRLLGFCYN 512
VK + G T K V S R + L +L G
Sbjct: 18 NCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVP 77
Query: 513 RHQAYLLYDYLPNGNLSE----KIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDL 568
+ Y + N L E K + +++ + + +H I HGDL
Sbjct: 78 KV-----YAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRG---IVHGDL 129
Query: 569 KASNIVFDENMEPHLAEFG 587
N++ E + +F
Sbjct: 130 SQYNVLVSE-EGIWIIDFP 147
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 49.6 bits (117), Expect = 6e-07
Identities = 28/217 (12%), Positives = 67/217 (30%), Gaps = 25/217 (11%)
Query: 467 LPTGITVSVKKI-------EWGATRIKIVSEF----ITRIGTVRHKNLIRLLGFCYNRHQ 515
+ V++K + E IK++ T+ ++ ++++LL ++
Sbjct: 35 MVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGP 94
Query: 516 AYLLYDYLPNGN-------LSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDL 568
+ + + + +I + GL ++H C I H D+
Sbjct: 95 NGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG--IIHTDI 152
Query: 569 KASNIVFD-ENMEPHLAEFGFKYLTQLADGSFPAKIAWTE----SGEFYNAMKEEMYMDV 623
K N++ + + +L + L + S E D+
Sbjct: 153 KPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADI 212
Query: 624 YGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYN 660
+ +I E++T L D + ++
Sbjct: 213 WSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 249
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.0 bits (112), Expect = 2e-06
Identities = 20/96 (20%), Positives = 35/96 (36%), Gaps = 13/96 (13%)
Query: 286 PWEFSRVTTLKSLDLSDNRLSG----PIPESFADLKNLRLLSLMYNEMSGTVPESLVQ-- 339
+ L+ L L+D +S + + +LR L L N + LV+
Sbjct: 362 QGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESV 421
Query: 340 ---LPSLEILFIWNNYFSGSLPENLG----RNSKLR 368
LE L +++ Y+S + + L LR
Sbjct: 422 RQPGCLLEQLVLYDIYWSEEMEDRLQALEKDKPSLR 457
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.0 bits (112), Expect = 3e-06
Identities = 19/95 (20%), Positives = 31/95 (32%), Gaps = 13/95 (13%)
Query: 265 LSNLTKLESLFLFRNQL----AGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFAD----- 315
+ L L+L + + +L+ LDLS+N L +
Sbjct: 365 GQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQP 424
Query: 316 LKNLRLLSLMYNEMSGTVPESLVQL----PSLEIL 346
L L L S + + L L PSL ++
Sbjct: 425 GCLLEQLVLYDIYWSEEMEDRLQALEKDKPSLRVI 459
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.3 bits (110), Expect = 4e-06
Identities = 20/94 (21%), Positives = 31/94 (32%), Gaps = 10/94 (10%)
Query: 246 EVQYLDIAGANLSGSIPKEL-SNLTKLESLFLFRNQLAGQVPWEFSRV----TTLKSLDL 300
++Q LDI LS + EL L + + + L L + S L L+L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 301 SDNRLSGPIPESFADL-----KNLRLLSLMYNEM 329
N L ++ LSL +
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCL 96
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.7 bits (106), Expect = 1e-05
Identities = 13/95 (13%), Positives = 29/95 (30%), Gaps = 21/95 (22%)
Query: 295 LKSLDLSDNRLS-GPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYF 353
++SLD+ LS E L+ +++ L ++ + +
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDI---------------- 47
Query: 354 SGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSG 388
L N L +++ +N + G
Sbjct: 48 ----SSALRVNPALAELNLRSNELGDVGVHCVLQG 78
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.2 bits (102), Expect = 4e-05
Identities = 11/94 (11%), Positives = 26/94 (27%), Gaps = 10/94 (10%)
Query: 102 ELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSG----HFPGGIQSLRNLLVLDA 156
++ L++ S E+ L + + + ++ L L+
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 157 FSNSFSGSVPAEISQL-----EHLKVLNLAGSYF 185
SN + Q ++ L+L
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCL 96
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.7 bits (98), Expect = 1e-04
Identities = 22/147 (14%), Positives = 40/147 (27%), Gaps = 14/147 (9%)
Query: 46 HDWFVPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRI-FFNELV 104
+ +S V + + I+ + +G + L
Sbjct: 313 QLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLR 372
Query: 105 DLNLSHNSFSGQ----FPVEIFNLTSLISLDISRNNFSGHFPGGI-----QSLRNLLVLD 155
L L+ S + SL LD+S N + Q L L
Sbjct: 373 VLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLV 432
Query: 156 AFSNSFSGSVPAEISQLE----HLKVL 178
+ +S + + LE L+V+
Sbjct: 433 LYDIYWSEEMEDRLQALEKDKPSLRVI 459
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.1 bits (94), Expect = 4e-04
Identities = 16/74 (21%), Positives = 27/74 (36%), Gaps = 5/74 (6%)
Query: 150 NLLVLDAFSNSFSGSVPAEI-SQLEHLKVLNLAGSYFSG----PIPSQFGSFKSLEFLHL 204
++ LD S + AE+ L+ +V+ L + I S +L L+L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 205 AGNLLNDQIPAELG 218
N L D +
Sbjct: 63 RSNELGDVGVHCVL 76
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.2 bits (89), Expect = 0.002
Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 9/82 (10%)
Query: 341 PSLEILFIWNNYFSG----SLPENLGRNSKLRWVDVSTNNFNGSIPPDICSG-----GVL 391
L +L++ + S SL L N LR +D+S N + + +L
Sbjct: 369 SVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLL 428
Query: 392 FKLILFSNNFTGIVMFIAAALL 413
+L+L+ ++ + AL
Sbjct: 429 EQLVLYDIYWSEEMEDRLQALE 450
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 46.5 bits (109), Expect = 3e-06
Identities = 40/226 (17%), Positives = 69/226 (30%), Gaps = 40/226 (17%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
F E + NL S + V L S+ + + ++ GIQ L N+ L N
Sbjct: 23 FAETIKDNLKKKSVTD--AVTQNELNSIDQIIANNSDIKS--VQGIQYLPNVTKLFLNGN 78
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ I L +LK L + + I + +
Sbjct: 79 KLTD-----IKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHL 133
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
+ + + +L + + D +++ L+ LTKL++L
Sbjct: 134 PQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIV-----PLAGLTKLQNL----- 183
Query: 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLM 325
LS N +S + A LKNL +L L
Sbjct: 184 -------------------YLSKNHISD--LRALAGLKNLDVLELF 208
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 44.2 bits (103), Expect = 2e-05
Identities = 43/204 (21%), Positives = 81/204 (39%), Gaps = 16/204 (7%)
Query: 147 SLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAG 206
+ + + S + +V ++L + + S Q+ ++ L L G
Sbjct: 22 AFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQGIQY--LPNVTKLFLNG 77
Query: 207 NLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELS 266
N L D P L LK + + + N + + + L+ + S L
Sbjct: 78 NKLTDIKP--LANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLE----HNGISDINGLV 131
Query: 267 NLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMY 326
+L +LESL+L N++ SL+ DN++S +P A L L+ L L
Sbjct: 132 HLPQLESLYLGNNKITDITVLSRLTKLDTLSLE--DNQISDIVP--LAGLTKLQNLYLSK 187
Query: 327 NEMSGTVPESLVQLPSLEILFIWN 350
N +S +L L +L++L +++
Sbjct: 188 NHISD--LRALAGLKNLDVLELFS 209
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 199 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 46.2 bits (108), Expect = 3e-06
Identities = 36/199 (18%), Positives = 71/199 (35%), Gaps = 16/199 (8%)
Query: 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159
E + L + + V +L + +L R G++ L NL ++ +N
Sbjct: 17 LAEKMKTVLGKTNVTD--TVSQTDLDQVTTLQADRLGIKS--IDGVEYLNNLTQINFSNN 72
Query: 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219
+ P + ++N P+ + F + ++ + L
Sbjct: 73 QLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNR 132
Query: 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279
L+ ++ + G Q N S Q D+ K L+NLT LE L + N
Sbjct: 133 LELSSNTISDISALSGLTSLQQLNFSSNQVTDL----------KPLANLTTLERLDISSN 182
Query: 280 QLAGQVPWEFSRVTTLKSL 298
+++ +++T L+SL
Sbjct: 183 KVSD--ISVLAKLTNLESL 199
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.4 bits (101), Expect = 2e-05
Identities = 16/101 (15%), Positives = 31/101 (30%), Gaps = 3/101 (2%)
Query: 287 WEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEIL 346
+++ + LDL ++ I A L + NE+ L L+ L
Sbjct: 12 AQYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKLDGFP--LLRRLKTL 68
Query: 347 FIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICS 387
+ NN L + ++ N+ D +
Sbjct: 69 LVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLA 109
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.8 bits (84), Expect = 0.003
Identities = 22/136 (16%), Positives = 41/136 (30%), Gaps = 7/136 (5%)
Query: 120 EIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179
+ N LD+ +L +D FS++ + L LK L
Sbjct: 13 QYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAID-FSDNEIRKLDG-FPLLRRLKTLL 69
Query: 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLND----QIPAELGMLKTVTHMEIGYNFYQG 235
+ + + L L L N L + A L L + + +
Sbjct: 70 VNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKH 129
Query: 236 NIPWQLGNMSEVQYLD 251
+ + + +V+ LD
Sbjct: 130 YRLYVIYKVPQVRVLD 145
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.8 bits (84), Expect = 0.003
Identities = 17/140 (12%), Positives = 44/140 (31%), Gaps = 7/140 (5%)
Query: 167 AEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHM 226
A+ + + L+L G I + + + + + N + +L+ + +
Sbjct: 12 AQYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKLDGFP--LLRRLKTL 68
Query: 227 EIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG-SIPKELSNLTKLESLFLF---RNQLA 282
+ N + ++ L + +L L++L L L +
Sbjct: 69 LVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKK 128
Query: 283 GQVPWEFSRVTTLKSLDLSD 302
+ +V ++ LD
Sbjct: 129 HYRLYVIYKVPQVRVLDFQK 148
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.8 bits (92), Expect = 3e-04
Identities = 21/130 (16%), Positives = 48/130 (36%), Gaps = 7/130 (5%)
Query: 99 FFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFS 158
+ L+L + ++ + L+ ++ + +++ LL L+ +
Sbjct: 20 YDGSQQALDLKGL----RSDPDLVAQNIDVVLNRR-SSMAATLRIIEENIPELLSLNLSN 74
Query: 159 NSFSG--SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAE 216
N + + + + +LK+LNL+G+ LE L L GN L+D +
Sbjct: 75 NRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQ 134
Query: 217 LGMLKTVTHM 226
+ +
Sbjct: 135 STYISAIRER 144
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.9 bits (87), Expect = 0.001
Identities = 20/143 (13%), Positives = 41/143 (28%), Gaps = 12/143 (8%)
Query: 189 IPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQ 248
+ L +L + +L + + + N+ E+
Sbjct: 12 LKLIMSKRYDGSQQAL--DLKGLRSDPDLVAQNIDVVLNRRSSMAA-TLRIIEENIPELL 68
Query: 249 YLDIAGANLSG--SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLS 306
L+++ L + + L+ L L N+L + + + L+ L L N LS
Sbjct: 69 SLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLS 128
Query: 307 GPIPES-------FADLKNLRLL 322
+ L L
Sbjct: 129 DTFRDQSTYISAIRERFPKLLRL 151
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 198 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 39.3 bits (90), Expect = 7e-04
Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 8/72 (11%)
Query: 288 EFSRVTTLKSLDLSDNRLSGPIP------ESFADLKNLRLLSLMYNEMSGTVPESLVQLP 341
F ++ + + L G IP + + LK + L+L N + SL +
Sbjct: 13 IFEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNI--EKISSLSGME 70
Query: 342 SLEILFIWNNYF 353
+L IL + N
Sbjct: 71 NLRILSLGRNLI 82
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.8 bits (86), Expect = 0.001
Identities = 18/109 (16%), Positives = 36/109 (33%), Gaps = 3/109 (2%)
Query: 271 LESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIP-ESFADLKNLRLLSLMYNEM 329
L R+ L L + + + + L LR L+++ + +
Sbjct: 10 SSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGL 68
Query: 330 SGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFN 378
P++ P L L + N SL + L+ + +S N +
Sbjct: 69 RFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPLH 116
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 37.9 bits (86), Expect = 0.003
Identities = 15/75 (20%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
Query: 317 KNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSG----SLPENLGRNSKLRWVDV 372
K+L+L ++ + +V L++ S++ + + N L EN+ L +
Sbjct: 8 KSLKLDAITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEF 66
Query: 373 STNNFNGSIPPDICS 387
S + F G + +I
Sbjct: 67 S-DIFTGRVKDEIPE 80
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 710 | |||
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 100.0 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.95 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.94 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.94 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.93 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.92 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.92 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.89 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.88 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.86 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.77 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.76 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.75 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.74 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.74 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.73 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.72 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.7 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.7 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.69 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.68 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.66 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.65 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.6 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.55 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.51 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.5 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.46 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.44 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.43 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.41 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.4 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.22 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.22 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.17 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.15 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.28 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.14 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 97.94 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 97.75 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.46 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.2 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 96.59 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 96.39 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 96.25 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 95.94 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 94.16 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 89.12 |
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-50 Score=409.26 Aligned_cols=249 Identities=20% Similarity=0.296 Sum_probs=197.0
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.||+|+||.||+|...+++.||||+++......+.|.+|++++++++|||||+++|+|.+++..++|||||++|+|.
T Consensus 9 ~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~ 88 (263)
T d1sm2a_ 9 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 88 (263)
T ss_dssp EEEEEECCSSCCEEEEEETTTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHH
T ss_pred EEEEEeeCCCeEEEEEEECCCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCCCcHH
Confidence 56789999999999999988999999999877666788999999999999999999999999999999999999999999
Q ss_pred hhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC---cccc
Q 005177 530 EKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---PAKI 603 (710)
Q Consensus 530 ~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~---~~~~ 603 (710)
+++.. ..+|..+.+|+.|+|+||+|||+. +|+||||||+|||+|+++.+||+|||+++......... ..++
T Consensus 89 ~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt 165 (263)
T d1sm2a_ 89 DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP 165 (263)
T ss_dssp HHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCTTCSGGGEEECGGGCEEECSCC------------------C
T ss_pred HHhhccccCCCHHHHHHHHHHHHHHHHhhhcc---ceeecccchhheeecCCCCeEecccchheeccCCCceeecceecC
Confidence 99865 468999999999999999999998 99999999999999999999999999998764322111 1234
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 683 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 683 (710)
..|.+||+.....++.++|||||||++|||+|++.|+........ ....+........+.. ...++.+++.+
T Consensus 166 ~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~-----~~~~i~~~~~~~~p~~---~~~~l~~li~~ 237 (263)
T d1sm2a_ 166 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE-----VVEDISTGFRLYKPRL---ASTHVYQIMNH 237 (263)
T ss_dssp TTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHH-----HHHHHHHTCCCCCCTT---SCHHHHHHHHH
T ss_pred cccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHH-----HHHHHHhcCCCCCccc---cCHHHHHHHHH
Confidence 457788998888999999999999999999997777654332211 1111111110111111 12457789999
Q ss_pred cCCCCCCCCCCHHHHHHHHhccCCCC
Q 005177 684 CTRSTPSDRPSMEEALKLLSGLKPHG 709 (710)
Q Consensus 684 Cl~~~p~~RPs~~evl~~L~~~~~~~ 709 (710)
||+.||++||||+||+++|++|++.|
T Consensus 238 cl~~~p~~Rps~~~il~~L~~i~esg 263 (263)
T d1sm2a_ 238 CWKERPEDRPAFSRLLRQLAEIAESG 263 (263)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HccCCHhHCcCHHHHHHHHHHHHhCC
Confidence 99999999999999999999987654
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.8e-49 Score=401.25 Aligned_cols=244 Identities=20% Similarity=0.304 Sum_probs=197.9
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.||+|+||.||+|...+++.||||+++......+.|.+|++++++++|||||+++|+|.+ +..++|||||++|+|.
T Consensus 17 ~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~~~g~L~ 95 (272)
T d1qpca_ 17 LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLV 95 (272)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTTCBHH
T ss_pred EeEEEecCCCcEEEEEEECCCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEeCCCCcHH
Confidence 567899999999999999889999999998776667889999999999999999999998854 5679999999999999
Q ss_pred hhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC---CCccc
Q 005177 530 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG---SFPAK 602 (710)
Q Consensus 530 ~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~---~~~~~ 602 (710)
+++.. .++|..+.+|+.|||+||+|||+. +|+||||||+|||+++++.+||+|||+|+....... ....+
T Consensus 96 ~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~---~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~g 172 (272)
T d1qpca_ 96 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF 172 (272)
T ss_dssp HHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCC
T ss_pred HHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccchhheeeecccceeeccccceEEccCCccccccccCC
Confidence 98764 579999999999999999999998 999999999999999999999999999987643211 11223
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
+..|++||+.....++.++|||||||++|||+||+.|+........ ....+........+.. ....+.+++.
T Consensus 173 t~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~-----~~~~i~~~~~~~~p~~---~~~~l~~li~ 244 (272)
T d1qpca_ 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE-----VIQNLERGYRMVRPDN---CPEELYQLMR 244 (272)
T ss_dssp CTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-----HHHHHHTTCCCCCCTT---CCHHHHHHHH
T ss_pred cccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHhcCCCCCccc---ChHHHHHHHH
Confidence 4457788988888899999999999999999998887764432211 1111111111111111 2245678999
Q ss_pred hcCCCCCCCCCCHHHHHHHHhcc
Q 005177 683 LCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 683 ~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
+||+.||++||||+||+++|+++
T Consensus 245 ~cl~~~P~~Rpt~~ei~~~L~~~ 267 (272)
T d1qpca_ 245 LCWKERPEDRPTFDYLRSVLEDF 267 (272)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHcCCCHhHCcCHHHHHHHhhhh
Confidence 99999999999999999999864
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=6.8e-49 Score=404.51 Aligned_cols=246 Identities=21% Similarity=0.281 Sum_probs=201.9
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCCh
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
..+.||+|+||.||+|.. .+|+.||||+++.+....+.|.+|++++++++|||||+++|+|.+++..++|||||++|+|
T Consensus 21 ~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l 100 (287)
T d1opja_ 21 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 100 (287)
T ss_dssp EEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred EeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecccCcch
Confidence 567899999999999986 5689999999987766678899999999999999999999999999999999999999999
Q ss_pred hhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC---cc
Q 005177 529 SEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---PA 601 (710)
Q Consensus 529 ~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~---~~ 601 (710)
.+++.. ..+|..+.+|+.|||+||+|||+. +|+||||||+|||+++++.+||+|||+|+......... ..
T Consensus 101 ~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~~~~ 177 (287)
T d1opja_ 101 LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 177 (287)
T ss_dssp HHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEETTEE
T ss_pred HHHhhhccccchHHHHHHHHHHHHHHHHHHHHHC---CcccCccccCeEEECCCCcEEEccccceeecCCCCceeecccc
Confidence 999864 568999999999999999999998 99999999999999999999999999998764322111 11
Q ss_pred cccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccccc-ccCCCcchHHHHHHHHHH
Q 005177 602 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN-EVGSSSSLQDEIKLVLDV 680 (710)
Q Consensus 602 ~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l 680 (710)
+...+.+||+.....++.++|||||||++|||+||+.|+..+...... .+.+... ....+. .....+.++
T Consensus 178 g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~------~~~i~~~~~~~~~~---~~~~~l~~l 248 (287)
T d1opja_ 178 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------YELLEKDYRMERPE---GCPEKVYEL 248 (287)
T ss_dssp ECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH------HHHHHTTCCCCCCT---TCCHHHHHH
T ss_pred ccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHH------HHHHhcCCCCCCCc---cchHHHHHH
Confidence 334467888888889999999999999999999998887654432110 0111111 011111 123457789
Q ss_pred HhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 681 ALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 681 ~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
+.+||+.||++||||+||++.|+.+..
T Consensus 249 i~~cl~~dP~~Rps~~ei~~~L~~~~~ 275 (287)
T d1opja_ 249 MRACWQWNPSDRPSFAEIHQAFETMFQ 275 (287)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHTTS
T ss_pred HHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 999999999999999999999988754
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-47 Score=388.56 Aligned_cols=247 Identities=15% Similarity=0.195 Sum_probs=202.0
Q ss_pred cCCchhhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 445 SFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
+|. ..+.||+|+||.||+|+..++..||||+++.+....+.|.+|++++++++|||||+++|+|.+++..++||||++
T Consensus 5 ~~~--~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~ 82 (258)
T d1k2pa_ 5 DLT--FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA 82 (258)
T ss_dssp CCC--CCCCCCEETTEEEEEEEETTTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred HCE--EeEEEecCCCeEEEEEEECCCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence 355 567899999999999999889999999999877777889999999999999999999999999999999999999
Q ss_pred CCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC--
Q 005177 525 NGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF-- 599 (710)
Q Consensus 525 ~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~-- 599 (710)
+|++.+++.. ..++..+.+++.|+|+||+|||+. +|+||||||+||++++++.+||+|||+++.........
T Consensus 83 ~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~---~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 159 (258)
T d1k2pa_ 83 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 159 (258)
T ss_dssp TEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCC
T ss_pred CCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhc---CcccccccceeEEEcCCCcEEECcchhheeccCCCceeec
Confidence 9999999754 578999999999999999999998 99999999999999999999999999998654322211
Q ss_pred -cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 600 -PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 600 -~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
..++.+|.+||......++.++|||||||++|||+| |+.|+..... .+ ....+........+.. ....+
T Consensus 160 ~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~-~~-----~~~~i~~~~~~~~p~~---~~~~l 230 (258)
T d1k2pa_ 160 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN-SE-----TAEHIAQGLRLYRPHL---ASEKV 230 (258)
T ss_dssp CSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCH-HH-----HHHHHHTTCCCCCCTT---CCHHH
T ss_pred ccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCH-HH-----HHHHHHhCCCCCCccc---ccHHH
Confidence 224455778999888899999999999999999999 6777753321 11 1111111111111111 22457
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 678 LDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
.+++.+||+.||++||||+|++++|.+|
T Consensus 231 ~~li~~cl~~dP~~RPt~~eil~~L~di 258 (258)
T d1k2pa_ 231 YTIMYSCWHEKADERPTFKILLSNILDV 258 (258)
T ss_dssp HHHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred HHHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence 7899999999999999999999999765
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-48 Score=396.76 Aligned_cols=248 Identities=17% Similarity=0.219 Sum_probs=190.3
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.||+|+||.||+|+... .||||+++.. ....+.|.+|++++++++|||||+++|++.+ +..++|||||++|
T Consensus 12 ~~~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~Ey~~~g 88 (276)
T d1uwha_ 12 VGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQWCEGS 88 (276)
T ss_dssp CCSEEEECSSCEEEEEESSS--EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCCEE
T ss_pred EEEEEeeCCCcEEEEEEECC--EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEecCCCC
Confidence 56789999999999998643 5999999753 3346789999999999999999999999854 5689999999999
Q ss_pred Chhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC----C
Q 005177 527 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS----F 599 (710)
Q Consensus 527 sL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~----~ 599 (710)
+|.++++. .++|.++.+|+.|||+||+|||+. +||||||||+|||++.++.+||+|||+|+........ .
T Consensus 89 ~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~---~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~~ 165 (276)
T d1uwha_ 89 SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 165 (276)
T ss_dssp EHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTSSEEECCCCCSCC------------
T ss_pred CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcC---CEeccccCHHHEEEcCCCCEEEccccceeeccccCCcccccc
Confidence 99999964 578999999999999999999998 9999999999999999999999999999875432111 1
Q ss_pred cccccccCchhhhhc---cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHH
Q 005177 600 PAKIAWTESGEFYNA---MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 676 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~---~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (710)
..++..|++||++.. ..++.++|||||||++|||+||+.||.+...... ...........+...... .+....
T Consensus 166 ~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~-~~~~~~~~~~~p~~~~~~---~~~~~~ 241 (276)
T d1uwha_ 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ-IIFMVGRGYLSPDLSKVR---SNCPKA 241 (276)
T ss_dssp CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHHHHHTSCCCCGGGSC---TTCCHH
T ss_pred cccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHH-HHHHHhcCCCCCcchhcc---ccchHH
Confidence 223445777887753 3478899999999999999999999875332111 000000111111100001 112345
Q ss_pred HHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 677 VLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 677 ~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
+.+++.+||+.||++||||+|++++|+.+++
T Consensus 242 l~~li~~cl~~dp~~RPt~~~il~~Le~l~~ 272 (276)
T d1uwha_ 242 MKRLMAECLKKKRDERPLFPQILASIELLAR 272 (276)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 7789999999999999999999999998864
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-47 Score=387.02 Aligned_cols=238 Identities=16% Similarity=0.220 Sum_probs=195.9
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|+. .+|+.||||.+.... ...+.+.+|++++++++|||||++++++.+++..|+|||||+
T Consensus 10 i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmEy~~ 89 (263)
T d2j4za1 10 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 89 (263)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEEeecC
Confidence 678899999999999986 679999999997532 235678899999999999999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCccc
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK 602 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~ 602 (710)
+|+|.+++.. .+++.....|+.|+++||+|||+. +|+||||||+|||++.++.+||+|||+|+...........+
T Consensus 90 ~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~G 166 (263)
T d2j4za1 90 LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCG 166 (263)
T ss_dssp TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCEETTE
T ss_pred CCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeeeeccccceecCCCCEeecccceeeecCCCcccccCC
Confidence 9999999965 678999999999999999999998 99999999999999999999999999998664332222335
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
+..|++||+..+..++.++|||||||++|||+||+.||.+..... ....+.... ...+.. ....+.+++.
T Consensus 167 t~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~------~~~~i~~~~-~~~p~~---~s~~~~~li~ 236 (263)
T d2j4za1 167 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE------TYKRISRVE-FTFPDF---VTEGARDLIS 236 (263)
T ss_dssp EGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTTC-CCCCTT---SCHHHHHHHH
T ss_pred CCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHH------HHHHHHcCC-CCCCcc---CCHHHHHHHH
Confidence 666889999988889999999999999999999999986432111 111111111 111111 2245678899
Q ss_pred hcCCCCCCCCCCHHHHHH
Q 005177 683 LCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 683 ~Cl~~~p~~RPs~~evl~ 700 (710)
+|++.||++|||++|+++
T Consensus 237 ~~L~~dp~~R~t~~eil~ 254 (263)
T d2j4za1 237 RLLKHNPSQRPMLREVLE 254 (263)
T ss_dssp HHTCSSGGGSCCHHHHHT
T ss_pred HHccCCHhHCcCHHHHHc
Confidence 999999999999999986
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4.6e-47 Score=393.13 Aligned_cols=245 Identities=18% Similarity=0.259 Sum_probs=186.9
Q ss_pred hhhhhcCCCCCccEEEEcC-CC---cEEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVLP-TG---ITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~-~g---~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
..++||+|+||.||+|... +| ..||||++... ....+.|.+|+++|++++|||||+++|+|.+++..++|||||
T Consensus 30 ~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~Ey~ 109 (299)
T d1jpaa_ 30 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFM 109 (299)
T ss_dssp EEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred EeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEec
Confidence 4578999999999999863 33 36999998754 234567999999999999999999999999999999999999
Q ss_pred CCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC-
Q 005177 524 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF- 599 (710)
Q Consensus 524 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~- 599 (710)
++|+|.+++.. .++|.++.+|+.|||+||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 110 ~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~ 186 (299)
T d1jpaa_ 110 ENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT 186 (299)
T ss_dssp TTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--------------
T ss_pred CCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhC---CCccCccccceEEECCCCcEEECCcccceEccCCCCcce
Confidence 99999998865 468999999999999999999998 99999999999999999999999999998764322111
Q ss_pred ------cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHH
Q 005177 600 ------PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 672 (710)
Q Consensus 600 ------~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (710)
..++..|.+||......++.++|||||||++|||+| |+.|+.+.... . ....+........+. +
T Consensus 187 ~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~-~-----~~~~i~~~~~~~~~~---~ 257 (299)
T d1jpaa_ 187 YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ-D-----VINAIEQDYRLPPPM---D 257 (299)
T ss_dssp ---------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-H-----HHHHHHTTCCCCCCT---T
T ss_pred eeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHH-H-----HHHHHHcCCCCCCCc---c
Confidence 112334667888888889999999999999999998 78887643221 1 111111111111111 2
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 673 EIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
....+.+++.+||+.||++||||+||++.|+++.
T Consensus 258 ~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l 291 (299)
T d1jpaa_ 258 CPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI 291 (299)
T ss_dssp CCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 2345678999999999999999999999998764
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.6e-47 Score=388.53 Aligned_cols=245 Identities=16% Similarity=0.237 Sum_probs=198.2
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.+++..|+|||
T Consensus 20 ~~Y~--~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE 97 (293)
T d1yhwa1 20 KKYT--RFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (293)
T ss_dssp TTBC--SCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cccE--EEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEE
Confidence 3466 778999999999999985 679999999998643 245678999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--C
Q 005177 522 YLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--S 598 (710)
Q Consensus 522 y~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--~ 598 (710)
||++|+|.+++.. .+++.+...|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+....... .
T Consensus 98 y~~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 174 (293)
T d1yhwa1 98 YLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174 (293)
T ss_dssp CCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred ecCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCcHHHeEECCCCcEeeccchhheeecccccccc
Confidence 9999999998865 678999999999999999999998 999999999999999999999999999987543221 1
Q ss_pred CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHH
Q 005177 599 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 678 (710)
Q Consensus 599 ~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (710)
...+++.|.+||+.....++.++||||+||++|||+||+.||.+...... ...+.... .............+.
T Consensus 175 ~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~------~~~~~~~~-~~~~~~~~~~s~~~~ 247 (293)
T d1yhwa1 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA------LYLIATNG-TPELQNPEKLSAIFR 247 (293)
T ss_dssp CCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHHHC-SCCCSSGGGSCHHHH
T ss_pred ccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHH------HHHHHhCC-CCCCCCcccCCHHHH
Confidence 22255668889998888899999999999999999999999874332110 00111000 000111122235677
Q ss_pred HHHhhcCCCCCCCCCCHHHHHH
Q 005177 679 DVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 679 ~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
+++.+||+.||++|||+.|+++
T Consensus 248 ~li~~~L~~dP~~R~s~~eil~ 269 (293)
T d1yhwa1 248 DFLNRCLDMDVEKRGSAKELLQ 269 (293)
T ss_dssp HHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHccCChhHCcCHHHHhc
Confidence 8999999999999999999976
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.5e-47 Score=389.42 Aligned_cols=246 Identities=19% Similarity=0.259 Sum_probs=192.0
Q ss_pred hhhhhcCCCCCccEEEEcCCC-----cEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVLPTG-----ITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g-----~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
..++||+|+||.||+|..... ..||||+++... ...+.|.+|++++++++|||||+++|+|.+.+..++||||
T Consensus 11 ~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~e~ 90 (283)
T d1mqba_ 11 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEY 90 (283)
T ss_dssp EEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred eeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEEEe
Confidence 668899999999999986432 479999997543 3356789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC-
Q 005177 523 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 598 (710)
Q Consensus 523 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~- 598 (710)
|++|++.+.+.. ..+|.++.+++.|+|+||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 91 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~---~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~ 167 (283)
T d1mqba_ 91 MENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAT 167 (283)
T ss_dssp CTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-----------
T ss_pred cccCcchhhhhcccccccHHHHHHHHHHHHHhhhhcccc---ccccCccccceEEECCCCeEEEcccchhhcccCCCccc
Confidence 999999988754 578999999999999999999998 9999999999999999999999999999875432111
Q ss_pred ----CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 599 ----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 599 ----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
...++..|.+||+.....++.++|||||||++|||+||+.|+..+..... ....+.+......+. +..
T Consensus 168 ~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~-----~~~~i~~~~~~~~~~---~~~ 239 (283)
T d1mqba_ 168 YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE-----VMKAINDGFRLPTPM---DCP 239 (283)
T ss_dssp ------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-----HHHHHHTTCCCCCCT---TCB
T ss_pred eEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHH-----HHHHHhccCCCCCch---hhH
Confidence 11134457788998888999999999999999999998887764433211 111111111111111 223
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
..+.+++.+||+.||++||||.||+++|+.+.
T Consensus 240 ~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~ 271 (283)
T d1mqba_ 240 SAIYQLMMQCWQQERARRPKFADIVSILDKLI 271 (283)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHh
Confidence 45778999999999999999999999998763
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.7e-47 Score=385.49 Aligned_cols=245 Identities=16% Similarity=0.175 Sum_probs=193.3
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
+|+ ..+.||+|+||.||+|+. .+|+.||||++..... ..+.+.+|++++++++|||||++++++.+++..|+|||
T Consensus 6 dy~--~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmE 83 (271)
T d1nvra_ 6 DWD--LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 83 (271)
T ss_dssp EEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ceE--EEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEe
Confidence 455 678999999999999985 6799999999976432 24568899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC---
Q 005177 522 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--- 596 (710)
Q Consensus 522 y~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~--- 596 (710)
||++|+|.+++.. .+++.+...++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+|+......
T Consensus 84 y~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~---~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~ 160 (271)
T d1nvra_ 84 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 160 (271)
T ss_dssp CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred ccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHc---CCccCcccHHHEEECCCCCEEEccchhheeeccCCccc
Confidence 9999999999965 578999999999999999999998 99999999999999999999999999998754221
Q ss_pred -CCCcccccccCchhhhhccCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 597 -GSFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 597 -~~~~~~~~~~~~~e~~~~~~~-~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
.....++..|++||+.....+ +.++||||+||++|||+||+.||.......... ....... .. ........
T Consensus 161 ~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~-----~~~~~~~-~~-~~~~~~~s 233 (271)
T d1nvra_ 161 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY-----SDWKEKK-TY-LNPWKKID 233 (271)
T ss_dssp CBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHH-----HHHHTTC-TT-STTGGGSC
T ss_pred cccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHH-----HHHhcCC-CC-CCccccCC
Confidence 112224556788898877665 678999999999999999999997543221100 0111111 00 11112223
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..+.+++.+|++.||++|||++|++++
T Consensus 234 ~~~~~li~~~L~~dP~~R~t~~eil~h 260 (271)
T d1nvra_ 234 SAPLALLHKILVENPSARITIPDIKKD 260 (271)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 456788999999999999999999764
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-46 Score=386.98 Aligned_cols=245 Identities=18% Similarity=0.248 Sum_probs=196.0
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.||+|+||.||+|...+++.||||+++......+.|.+|+.++++++|||||+++|+|. ++..++|||||++|+|.
T Consensus 21 i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~Ey~~~g~l~ 99 (285)
T d1fmka3 21 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLL 99 (285)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHH
T ss_pred EeeEEeeCCCeEEEEEEECCCCEEEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEEEEecCCCchh
Confidence 67789999999999999988889999999877666788999999999999999999999985 46689999999999999
Q ss_pred hhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC---ccc
Q 005177 530 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---PAK 602 (710)
Q Consensus 530 ~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~---~~~ 602 (710)
+++.. .++|.++.+|+.|||+||+|||+. +|+||||||+|||+|+++.+||+|||+++......... ..+
T Consensus 100 ~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~---~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~g 176 (285)
T d1fmka3 100 DFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 176 (285)
T ss_dssp HHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC--------------C
T ss_pred hhhhhcccccchHHHHHHHHHHHHHHHHHHhhh---heecccccceEEEECCCCcEEEcccchhhhccCCCceeeccccc
Confidence 98864 579999999999999999999998 99999999999999999999999999998764322111 223
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
+..|.+||+.....++.++|||||||++|||+||+.|+......... ...+........+. +...++.+++.
T Consensus 177 t~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~-----~~~i~~~~~~~~~~---~~~~~l~~li~ 248 (285)
T d1fmka3 177 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV-----LDQVERGYRMPCPP---ECPESLHDLMC 248 (285)
T ss_dssp CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH-----HHHHHTTCCCCCCT---TSCHHHHHHHH
T ss_pred cccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHH-----HHHHHhcCCCCCCc---ccCHHHHHHHH
Confidence 44577889888889999999999999999999988887654432211 11111111011111 12345778999
Q ss_pred hcCCCCCCCCCCHHHHHHHHhccC
Q 005177 683 LCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 683 ~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
+||+.||++||||+||+++|+..-
T Consensus 249 ~cl~~dP~~Rps~~~i~~~L~~~~ 272 (285)
T d1fmka3 249 QCWRKEPEERPTFEYLQAFLEDYF 272 (285)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred HHcccCHhHCcCHHHHHHHHhhhh
Confidence 999999999999999999998754
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-46 Score=386.01 Aligned_cols=240 Identities=15% Similarity=0.171 Sum_probs=189.7
Q ss_pred hhcCCCCCccEEEEc---CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 453 EAARPQSAAGCKAVL---PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~---~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
+||+|+||.||+|.. .++..||||+++... ...+.|.+|++++++++|||||+++|+|.+ +..|+|||||++|+
T Consensus 16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE~~~~g~ 94 (285)
T d1u59a_ 16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 94 (285)
T ss_dssp EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEE
T ss_pred EEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEEeCCCCc
Confidence 499999999999975 346689999997643 346779999999999999999999999975 56899999999999
Q ss_pred hhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-----CC
Q 005177 528 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-----SF 599 (710)
Q Consensus 528 L~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-----~~ 599 (710)
|.+++.. .+++.++.+|+.|+|+||+|||+. +|+||||||+|||++.++.+||+|||+++....... ..
T Consensus 95 L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~ 171 (285)
T d1u59a_ 95 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 171 (285)
T ss_dssp HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCS
T ss_pred HHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCcCchhheeeccCCceeeccchhhhcccccccccccccc
Confidence 9999754 578999999999999999999998 999999999999999999999999999987543211 11
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 678 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (710)
..++..+.+||+.....++.++|||||||++|||+| |+.||.+..... ....+........++. ....+.
T Consensus 172 ~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~------~~~~i~~~~~~~~p~~---~~~~l~ 242 (285)
T d1u59a_ 172 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE------VMAFIEQGKRMECPPE---CPPELY 242 (285)
T ss_dssp SCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH------HHHHHHTTCCCCCCTT---CCHHHH
T ss_pred cccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCCCCCCc---CCHHHH
Confidence 123344667888888889999999999999999998 888886433211 1111111111111111 224567
Q ss_pred HHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 679 DVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 679 ~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
+++.+||+.||++||||.+|++.|+.+
T Consensus 243 ~li~~cl~~~p~~RPs~~~i~~~L~~~ 269 (285)
T d1u59a_ 243 ALMSDCWIYKWEDRPDFLTVEQRMRAC 269 (285)
T ss_dssp HHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 899999999999999999999988753
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-46 Score=385.92 Aligned_cols=241 Identities=16% Similarity=0.191 Sum_probs=188.5
Q ss_pred hhhcCCCCCccEEEEc---CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 452 EEAARPQSAAGCKAVL---PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~---~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
+.||+|+||.||+|.. .+++.||||+++... ...+.|.+|++++++++|||||+++|+|.+ +..++|||||++
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~ 91 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 91 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence 5799999999999975 345789999997532 235679999999999999999999999965 457899999999
Q ss_pred CChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC-----
Q 005177 526 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS----- 598 (710)
Q Consensus 526 gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~----- 598 (710)
|+|.++++. .++|..+.+|+.|||+||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 92 g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~---~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~ 168 (277)
T d1xbba_ 92 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 168 (277)
T ss_dssp EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC--
T ss_pred CcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhC---CcccCCCcchhhcccccCcccccchhhhhhcccccccccccc
Confidence 999999975 578999999999999999999998 9999999999999999999999999999865422111
Q ss_pred CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 599 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 599 ~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
...++..|.+||......++.++|||||||++|||+| |+.||.+....+ ....+........+.. ....+
T Consensus 169 ~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~------~~~~i~~~~~~~~p~~---~~~~~ 239 (277)
T d1xbba_ 169 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE------VTAMLEKGERMGCPAG---CPREM 239 (277)
T ss_dssp --CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH------HHHHHHTTCCCCCCTT---CCHHH
T ss_pred ccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHH------HHHHHHcCCCCCCCcc---cCHHH
Confidence 1123344667888888889999999999999999998 788886432111 1111111111111111 22456
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 678 LDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
.+++.+||+.||++||||+||.++|+..
T Consensus 240 ~~li~~cl~~dp~~RPs~~~i~~~L~~~ 267 (277)
T d1xbba_ 240 YDLMNLCWTYDVENRPGFAAVELRLRNY 267 (277)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHhHCcCHHHHHHHhhCH
Confidence 7899999999999999999999988753
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-46 Score=393.74 Aligned_cols=251 Identities=16% Similarity=0.179 Sum_probs=197.1
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
+|. ..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|+++|++++|||||+++++|.+++..|+|||
T Consensus 7 ~y~--~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmE 84 (322)
T d1s9ja_ 7 DFE--KISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 84 (322)
T ss_dssp GEE--EEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCE--EEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence 355 678999999999999985 689999999998642 235678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC
Q 005177 522 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 599 (710)
Q Consensus 522 y~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 599 (710)
||++|+|.+++.+ .+++.....++.|+++||+|||+.+ +|+||||||+|||+++++.+||+|||+|+.........
T Consensus 85 y~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~--~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~ 162 (322)
T d1s9ja_ 85 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 162 (322)
T ss_dssp CCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC--
T ss_pred cCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEccccCHHHeeECCCCCEEEeeCCCccccCCCcccc
Confidence 9999999999965 6789999999999999999999631 79999999999999999999999999998764433333
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc--cccc------------------c--
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID--GLLG------------------E-- 657 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~--~~~~------------------~-- 657 (710)
..++.+|++||+..+.+++.++||||+||++|||+||+.||.+.......... .... .
T Consensus 163 ~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (322)
T d1s9ja_ 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGM 242 (322)
T ss_dssp -CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC---------------------------
T ss_pred ccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccccccccc
Confidence 34566788999999999999999999999999999999999754321100000 0000 0
Q ss_pred --------------cccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 658 --------------MYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 658 --------------~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.....+...+. .....++.+++.+|++.||++|||++|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~dli~~~L~~dP~~R~ta~e~L~H 298 (322)
T d1s9ja_ 243 DSRPPMAIFELLDYIVNEPPPKLPS--GVFSLEFQDFVNKCLIKNPAERADLKQLMVH 298 (322)
T ss_dssp ---CCCCHHHHHHHHHTSCCCCCCB--TTBCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccchhHHHHHhhhhccCCccCcc--ccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 00000000000 0112467889999999999999999999863
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-46 Score=380.72 Aligned_cols=241 Identities=19% Similarity=0.218 Sum_probs=187.7
Q ss_pred hhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEc----CCceeEEEee
Q 005177 451 CEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYN----RHQAYLLYDY 522 (710)
Q Consensus 451 ~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~~~lv~Ey 522 (710)
.+.||+|+||.||+|.. .+|..||||++.... ...+.+.+|++++++++|||||++++++.+ ++..|+||||
T Consensus 14 ~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE~ 93 (270)
T d1t4ha_ 14 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL 93 (270)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEEC
T ss_pred eeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEeC
Confidence 35799999999999985 678999999998642 235678999999999999999999999875 3457999999
Q ss_pred cCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec-CCCceEEcccCccccccccCCCC
Q 005177 523 LPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-ENMEPHLAEFGFKYLTQLADGSF 599 (710)
Q Consensus 523 ~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~-~~~~~kl~DfGla~~~~~~~~~~ 599 (710)
|++|+|.+++.. .+++.....++.|+++||+|||++ .++|+||||||+|||++ +++.+||+|||+|+.........
T Consensus 94 ~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~-~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~~~~ 172 (270)
T d1t4ha_ 94 MTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA 172 (270)
T ss_dssp CCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEE
T ss_pred CCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHC-CCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCccCC
Confidence 999999999975 678999999999999999999987 12499999999999997 57899999999998654332222
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 679 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (710)
..+++.|.+||+... +++.++|||||||++|||+||+.||.+...... ....+.... .+ ........+++.+
T Consensus 173 ~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~-----~~~~i~~~~-~~-~~~~~~~~~~~~~ 244 (270)
T d1t4ha_ 173 VIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ-----IYRRVTSGV-KP-ASFDKVAIPEVKE 244 (270)
T ss_dssp SCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH-----HHHHHTTTC-CC-GGGGGCCCHHHHH
T ss_pred cccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHH-----HHHHHHcCC-CC-cccCccCCHHHHH
Confidence 234556778888754 689999999999999999999999874432211 011111110 00 0011112345678
Q ss_pred HHhhcCCCCCCCCCCHHHHHH
Q 005177 680 VALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 680 l~~~Cl~~~p~~RPs~~evl~ 700 (710)
++.+||+.||++|||++|+++
T Consensus 245 li~~~l~~dp~~R~s~~ell~ 265 (270)
T d1t4ha_ 245 IIEGCIRQNKDERYSIKDLLN 265 (270)
T ss_dssp HHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHccCCHhHCcCHHHHhC
Confidence 999999999999999999976
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.4e-46 Score=388.78 Aligned_cols=250 Identities=21% Similarity=0.258 Sum_probs=200.2
Q ss_pred cCCchhhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCce
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 516 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 516 (710)
+|. ..+.||+|+||.||+|+. .+++.||||+++.... ..+.|.+|++++++++|||||+++++|.+++..
T Consensus 14 ~~~--~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~ 91 (301)
T d1lufa_ 14 NIE--YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM 91 (301)
T ss_dssp GCE--EEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred HcE--EeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCce
Confidence 355 778899999999999974 3568999999976432 356799999999999999999999999999999
Q ss_pred eEEEeecCCCChhhhhhc--------------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCC
Q 005177 517 YLLYDYLPNGNLSEKIRT--------------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKA 570 (710)
Q Consensus 517 ~lv~Ey~~~gsL~~~l~~--------------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~ 570 (710)
++||||+++|+|.++++. .++|..+.+|+.|+|.||+|||+. +|+||||||
T Consensus 92 ~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~---~ivHrDlKp 168 (301)
T d1lufa_ 92 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLAT 168 (301)
T ss_dssp EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred EEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC---CeEeeEEcc
Confidence 999999999999999853 267889999999999999999998 999999999
Q ss_pred CCeEecCCCceEEcccCccccccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCC
Q 005177 571 SNIVFDENMEPHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSL 646 (710)
Q Consensus 571 ~NiLl~~~~~~kl~DfGla~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~ 646 (710)
+|||+|.++.+||+|||+++........ ...+..++++||+.....++.++|||||||++|||+||+.|++.+...
T Consensus 169 ~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~ 248 (301)
T d1lufa_ 169 RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH 248 (301)
T ss_dssp GGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred cceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCH
Confidence 9999999999999999999865432211 122445578889998889999999999999999999997654433322
Q ss_pred CcccccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 647 QNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
.+ ....+.+......+. ....++.+++.+||+.||++||||.||+++|++|.+
T Consensus 249 ~e-----~~~~v~~~~~~~~p~---~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~~ 301 (301)
T d1lufa_ 249 EE-----VIYYVRDGNILACPE---NCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 301 (301)
T ss_dssp HH-----HHHHHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred HH-----HHHHHHcCCCCCCCc---cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 11 111111111111111 123457789999999999999999999999998864
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-46 Score=379.87 Aligned_cols=243 Identities=20% Similarity=0.267 Sum_probs=186.3
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEc-CCceeEEEeecCCCCh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN-RHQAYLLYDYLPNGNL 528 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-~~~~~lv~Ey~~~gsL 528 (710)
..+.||+|+||.||+|.. .|+.||||+++... ..+.+.+|++++++++|||||+++|+|.+ .+..++||||+++|+|
T Consensus 11 ~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~~-~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L 88 (262)
T d1byga_ 11 LLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 88 (262)
T ss_dssp EEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEH
T ss_pred EeEEEecCCCeEEEEEEE-CCeEEEEEEECcHH-HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCCCCH
Confidence 457799999999999998 68899999997543 45678999999999999999999999965 4568999999999999
Q ss_pred hhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCccccc
Q 005177 529 SEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIA 604 (710)
Q Consensus 529 ~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 604 (710)
.++++. .++|..+.+|+.|||+||+|||+. +|+||||||+||+++.++.+|++|||+++.......... +..
T Consensus 89 ~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~-~~~ 164 (262)
T d1byga_ 89 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK-LPV 164 (262)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-------------CCT
T ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHhhccccccC---ceeccccchHhheecCCCCEeecccccceecCCCCcccc-ccc
Confidence 999965 479999999999999999999998 999999999999999999999999999987543322222 334
Q ss_pred ccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhc
Q 005177 605 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 684 (710)
Q Consensus 605 ~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 684 (710)
.+.+||+..+..++.++|||||||++|||+|+++|+........ ....+........+. .....+.+++.+|
T Consensus 165 ~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~-----~~~~i~~~~~~~~~~---~~~~~~~~li~~c 236 (262)
T d1byga_ 165 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-----VVPRVEKGYKMDAPD---GCPPAVYEVMKNC 236 (262)
T ss_dssp TTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG-----HHHHHTTTCCCCCCT---TCCHHHHHHHHHH
T ss_pred cCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHH-----HHHHHHcCCCCCCCc---cCCHHHHHHHHHH
Confidence 46788888888999999999999999999995444443322211 111111111011111 1224567899999
Q ss_pred CCCCCCCCCCHHHHHHHHhccC
Q 005177 685 TRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 685 l~~~p~~RPs~~evl~~L~~~~ 706 (710)
|+.||++||||.|++++|+.++
T Consensus 237 l~~dP~~Rps~~~l~~~L~~i~ 258 (262)
T d1byga_ 237 WHLDAAMRPSFLQLREQLEHIK 258 (262)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccCHhHCcCHHHHHHHHHHHH
Confidence 9999999999999999999875
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-46 Score=381.50 Aligned_cols=245 Identities=17% Similarity=0.201 Sum_probs=185.0
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEc--CCceeE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQAYL 518 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~l 518 (710)
+|. ..+.||+|+||.||+|.. .+|+.||||.++... ...+.+.+|++++++++|||||++++++.+ .+..|+
T Consensus 5 dy~--~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~i 82 (269)
T d2java1 5 DYE--VLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 82 (269)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEE
T ss_pred hCE--EeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEE
Confidence 355 678999999999999985 689999999997643 235678899999999999999999999975 456899
Q ss_pred EEeecCCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCC--CCCceecCCCCCCeEecCCCceEEcccCccc
Q 005177 519 LYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDC--YPAIPHGDLKASNIVFDENMEPHLAEFGFKY 590 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~--~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~ 590 (710)
|||||++|+|.+++.. .+++.....++.|++.||+|||+.. ..+|+||||||+|||++.++.+||+|||+++
T Consensus 83 vmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~ 162 (269)
T d2java1 83 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 162 (269)
T ss_dssp EEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHH
T ss_pred EEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeecccee
Confidence 9999999999999853 5789999999999999999999862 1259999999999999999999999999998
Q ss_pred cccccCCC--CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCc
Q 005177 591 LTQLADGS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 668 (710)
Q Consensus 591 ~~~~~~~~--~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (710)
........ ...++++|.+||......++.++|||||||++|||+||+.||.+.... .....+........+.
T Consensus 163 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~------~~~~~i~~~~~~~~~~ 236 (269)
T d2java1 163 ILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK------ELAGKIREGKFRRIPY 236 (269)
T ss_dssp HC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHTCCCCCCT
T ss_pred ecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHH------HHHHHHHcCCCCCCCc
Confidence 76432211 122456688899998888999999999999999999999998643211 1111111111111111
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 669 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 669 ~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
....++.+++.+||+.||++|||++|+++
T Consensus 237 ---~~s~~l~~li~~~L~~dp~~Rps~~ell~ 265 (269)
T d2java1 237 ---RYSDELNEIITRMLNLKDYHRPSVEEILE 265 (269)
T ss_dssp ---TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---ccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 12345678889999999999999999975
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-46 Score=385.52 Aligned_cols=242 Identities=17% Similarity=0.164 Sum_probs=192.4
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc-chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG-ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
..+.||+|+||.||+|.. .+|+.||||+++.. ....+.+.+|++++++++|||||++++++.+++..++|||||++|+
T Consensus 16 i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~~g~ 95 (288)
T d2jfla1 16 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGA 95 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred EeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCCCCc
Confidence 567899999999999985 67999999999764 3346778999999999999999999999999999999999999999
Q ss_pred hhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC--CCCccc
Q 005177 528 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--GSFPAK 602 (710)
Q Consensus 528 L~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~--~~~~~~ 602 (710)
|.+++.. .+++.+...++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+|+...... .....+
T Consensus 96 L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~---~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~~G 172 (288)
T d2jfla1 96 VDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIG 172 (288)
T ss_dssp HHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCCCS
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEEeecChhheeECCCCCEEEEechhhhccCCCccccccccc
Confidence 9998753 478999999999999999999999 99999999999999999999999999987543211 112224
Q ss_pred ccccCchhhhh-----ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 603 IAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 603 ~~~~~~~e~~~-----~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
+..|.+||+.. ...++.++|||||||++|||+||+.||.+..... .+..+.... .............+
T Consensus 173 t~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~------~~~~i~~~~-~~~~~~~~~~s~~~ 245 (288)
T d2jfla1 173 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR------VLLKIAKSE-PPTLAQPSRWSSNF 245 (288)
T ss_dssp CCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGG------HHHHHHHSC-CCCCSSGGGSCHHH
T ss_pred ccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHH------HHHHHHcCC-CCCCCccccCCHHH
Confidence 45577888763 4457899999999999999999999987543211 111111111 00011112233567
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 678 LDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+++.+||+.||++|||++|++++
T Consensus 246 ~~li~~~L~~dp~~R~t~~ell~h 269 (288)
T d2jfla1 246 KDFLKKCLEKNVDARWTTSQLLQH 269 (288)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HHHHHHHccCChhHCcCHHHHhcC
Confidence 789999999999999999999763
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.8e-46 Score=389.91 Aligned_cols=242 Identities=17% Similarity=0.203 Sum_probs=190.8
Q ss_pred hhhhhcCCCCCccEEEEcC-C-----CcEEEEEEeecc--chhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVLP-T-----GITVSVKKIEWG--ATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~-~-----g~~vAvK~l~~~--~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 520 (710)
..+.||+|+||.||+|+.. . +..||||++... ......+.+|++++.++ +|||||+++|+|.+.+..++||
T Consensus 41 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~ 120 (325)
T d1rjba_ 41 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIF 120 (325)
T ss_dssp EEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred EeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeEEEEE
Confidence 5678999999999999852 2 247999998653 23356788999999998 8999999999999999999999
Q ss_pred eecCCCChhhhhhc-------------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe
Q 005177 521 DYLPNGNLSEKIRT-------------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 575 (710)
Q Consensus 521 Ey~~~gsL~~~l~~-------------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl 575 (710)
|||++|+|.++++. .++|..+..|+.||++||+|||+. +|+||||||+|||+
T Consensus 121 Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~---~IiHRDlKp~Nill 197 (325)
T d1rjba_ 121 EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLV 197 (325)
T ss_dssp ECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSGGGEEE
T ss_pred EcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCchhcccc
Confidence 99999999999964 257889999999999999999998 99999999999999
Q ss_pred cCCCceEEcccCccccccccCCCC----cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccc
Q 005177 576 DENMEPHLAEFGFKYLTQLADGSF----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKP 650 (710)
Q Consensus 576 ~~~~~~kl~DfGla~~~~~~~~~~----~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~ 650 (710)
+.++.+||+|||+|+......... ..++..|++||......++.++|||||||++|||+| |+.||.+......
T Consensus 198 ~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~-- 275 (325)
T d1rjba_ 198 THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN-- 275 (325)
T ss_dssp ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH--
T ss_pred ccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHH--
Confidence 999999999999998765432211 113445778898888899999999999999999998 7888764332111
Q ss_pred cccccccccccc-ccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHh
Q 005177 651 IDGLLGEMYNEN-EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLS 703 (710)
Q Consensus 651 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~ 703 (710)
+.+++... ....+.. ....+.+++.+||+.||++||||+||+++|.
T Consensus 276 ----~~~~~~~~~~~~~p~~---~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 322 (325)
T d1rjba_ 276 ----FYKLIQNGFKMDQPFY---ATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322 (325)
T ss_dssp ----HHHHHHTTCCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----HHHHHhcCCCCCCCCc---CCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence 11111111 0111111 2245778999999999999999999999984
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=6e-46 Score=385.74 Aligned_cols=250 Identities=16% Similarity=0.157 Sum_probs=186.7
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCcee
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 517 (710)
++.+.|. ..+.||+|+||.||+|.. .+|+.||||.+..... ..+.+.+|++++++++|||||++++++.+++..|
T Consensus 6 di~d~Y~--~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 83 (307)
T d1a06a_ 6 DIRDIYD--FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLY 83 (307)
T ss_dssp CGGGTEE--EEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred CCccceE--EEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 3444465 778999999999999985 6799999999986432 3456788999999999999999999999999999
Q ss_pred EEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec---CCCceEEcccCccccc
Q 005177 518 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD---ENMEPHLAEFGFKYLT 592 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~---~~~~~kl~DfGla~~~ 592 (710)
+|||||++|+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+|||+. +++.+||+|||+++..
T Consensus 84 lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~ 160 (307)
T d1a06a_ 84 LIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME 160 (307)
T ss_dssp EEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCC------
T ss_pred EEEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhc---eeeeEEecccceeecccCCCceEEEeccceeEEc
Confidence 99999999999999965 578999999999999999999998 999999999999995 5789999999999876
Q ss_pred cccCCC-CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchH
Q 005177 593 QLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 671 (710)
Q Consensus 593 ~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (710)
...... ...+++.|++||+..+..++.++||||+||++|||+||+.||.+...... ...+.........+...
T Consensus 161 ~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~------~~~i~~~~~~~~~~~~~ 234 (307)
T d1a06a_ 161 DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKL------FEQILKAEYEFDSPYWD 234 (307)
T ss_dssp ------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH------HHHHHTTCCCCCTTTTT
T ss_pred cCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHH------HHHHhccCCCCCCcccc
Confidence 432211 22255668889999888899999999999999999999999975432110 11111111011111112
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 672 DEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 672 ~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+....+.+++.+|++.||++|||++|++++
T Consensus 235 ~~s~~~~~li~~~L~~dP~~R~s~~eil~h 264 (307)
T d1a06a_ 235 DISDSAKDFIRHLMEKDPEKRFTCEQALQH 264 (307)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred CCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence 233567789999999999999999999874
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-45 Score=381.90 Aligned_cols=254 Identities=20% Similarity=0.239 Sum_probs=191.9
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCC----ceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----QAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----~~~lv~Ey~~~ 525 (710)
..+.||+|+||.||+|+. +|+.||||+++.........+.|+..+.+++|||||+++|+|.+++ ..++|||||++
T Consensus 7 l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~ 85 (303)
T d1vjya_ 7 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH 85 (303)
T ss_dssp EEEEEECCSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred EEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccC
Confidence 456799999999999986 7899999999865444434455666677899999999999998754 57999999999
Q ss_pred CChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCC-----CCCceecCCCCCCeEecCCCceEEcccCccccccccCC--
Q 005177 526 GNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDC-----YPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-- 597 (710)
Q Consensus 526 gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~-----~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-- 597 (710)
|+|.+++++ .++|.++.+++.|+|+||+|+|+.+ .++|+||||||+|||++.++.+||+|||+++.......
T Consensus 86 g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~~ 165 (303)
T d1vjya_ 86 GSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI 165 (303)
T ss_dssp CBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEE
T ss_pred CCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccccCCCcce
Confidence 999999986 6799999999999999999999742 35999999999999999999999999999987643221
Q ss_pred ----CCcccccccCchhhhhcc------CCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc----------cc---
Q 005177 598 ----SFPAKIAWTESGEFYNAM------KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID----------GL--- 654 (710)
Q Consensus 598 ----~~~~~~~~~~~~e~~~~~------~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~----------~~--- 654 (710)
....++..|.+||+.... .++.++|||||||++|||+||..|+........ +.. ..
T Consensus 166 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 244 (303)
T d1vjya_ 166 DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL-PYYDLVPSDPSVEEMRKV 244 (303)
T ss_dssp CC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCC-TTTTTSCSSCCHHHHHHH
T ss_pred eccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCccccccc-chhhcccccchHHHHHHH
Confidence 112245567788876543 367789999999999999999877653221110 000 00
Q ss_pred -ccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 655 -LGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 655 -~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
..+..++. ........+....+.+++.+||+.||++||||.||+++|+++.
T Consensus 245 ~~~~~~~p~-~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~ 296 (303)
T d1vjya_ 245 VCEQKLRPN-IPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp HTTSCCCCC-CCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhccccCCC-CCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence 01111111 1101112234566889999999999999999999999998875
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-45 Score=380.15 Aligned_cols=244 Identities=20% Similarity=0.238 Sum_probs=191.9
Q ss_pred hhhcCCCCCccEEEEcCC----CcEEEEEEeec--cchhHHHHHHHHHHHhccCCCCceeEEEEEEc-CCceeEEEeecC
Q 005177 452 EEAARPQSAAGCKAVLPT----GITVSVKKIEW--GATRIKIVSEFITRIGTVRHKNLIRLLGFCYN-RHQAYLLYDYLP 524 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~~~----g~~vAvK~l~~--~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-~~~~~lv~Ey~~ 524 (710)
++||+|+||+||+|.+.+ ...||||+++. .....+.|.+|++++++++|||||+++|+|.+ ++..++|||||+
T Consensus 33 ~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~ 112 (311)
T d1r0pa_ 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 112 (311)
T ss_dssp EEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECCT
T ss_pred eEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEee
Confidence 679999999999998633 23699999975 23346789999999999999999999999876 468899999999
Q ss_pred CCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC---
Q 005177 525 NGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--- 598 (710)
Q Consensus 525 ~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--- 598 (710)
+|+|.++++. ..++..+.+++.|+|+||.|+|+. +|+||||||+|||+|+++.+||+|||+++........
T Consensus 113 ~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~---~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~ 189 (311)
T d1r0pa_ 113 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 189 (311)
T ss_dssp TCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTT
T ss_pred cCchhhhhccccccchHHHHHHHHHHHHHhhhhhccc---CcccCCccHHhEeECCCCCEEEecccchhhccccccccce
Confidence 9999999875 356888999999999999999998 9999999999999999999999999999865432111
Q ss_pred ---CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHH
Q 005177 599 ---FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 675 (710)
Q Consensus 599 ---~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (710)
...++..+.+||......++.++|||||||++|||+||+.|+.......... ..+........+.. ...
T Consensus 190 ~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~-----~~i~~g~~~~~p~~---~~~ 261 (311)
T d1r0pa_ 190 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-----VYLLQGRRLLQPEY---CPD 261 (311)
T ss_dssp CTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CH-----HHHHTTCCCCCCTT---CCH
T ss_pred ecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHH-----HHHHcCCCCCCccc---CcH
Confidence 1123444677888888899999999999999999999999887544332211 11111111111111 124
Q ss_pred HHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 676 LVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 676 ~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
.+.+++.+||+.||++||||+||+++|+++.
T Consensus 262 ~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~ 292 (311)
T d1r0pa_ 262 PLYEVMLKCWHPKAEMRPSFSELVSRISAIF 292 (311)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 5678999999999999999999999998874
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=2.7e-45 Score=387.34 Aligned_cols=250 Identities=19% Similarity=0.235 Sum_probs=200.8
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
.+.++|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+++..|+
T Consensus 23 ~il~~Y~--i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i 100 (350)
T d1koaa2 23 HVLDHYD--IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVM 100 (350)
T ss_dssp CGGGTEE--EEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEE
T ss_pred CCccCeE--EEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 4556666 788999999999999985 689999999997643 346678899999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC--CCceEEcccCcccccc
Q 005177 519 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE--NMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~--~~~~kl~DfGla~~~~ 593 (710)
|||||++|+|.+++.. .+++.....|+.||+.||+|||+. +|+||||||+|||++. ++.+||+|||+++...
T Consensus 101 vmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~ 177 (350)
T d1koaa2 101 IYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 177 (350)
T ss_dssp EECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTSCCEEECCCTTCEECC
T ss_pred EEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhc---CCeeeeechhHeeeccCCCCeEEEeecchheecc
Confidence 9999999999999853 478999999999999999999999 9999999999999964 5789999999998765
Q ss_pred ccCCC-CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHH
Q 005177 594 LADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 672 (710)
Q Consensus 594 ~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (710)
..... ...++.+|++||+..+..++.++||||+||++|||+||+.||.+..... ....+..............
T Consensus 178 ~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~------~~~~i~~~~~~~~~~~~~~ 251 (350)
T d1koaa2 178 PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE------TLRNVKSCDWNMDDSAFSG 251 (350)
T ss_dssp TTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTCCCSCCGGGGG
T ss_pred cccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHH------HHHHHHhCCCCCCcccccC
Confidence 33221 1224566889999988889999999999999999999999986432211 1111111110111111222
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 673 EIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
....+.+++.+|++.||++|||++|++++
T Consensus 252 ~s~~~~~li~~~L~~dP~~R~t~~eil~h 280 (350)
T d1koaa2 252 ISEDGKDFIRKLLLADPNTRMTIHQALEH 280 (350)
T ss_dssp CCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 33567789999999999999999999875
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-45 Score=377.97 Aligned_cols=249 Identities=18% Similarity=0.182 Sum_probs=197.7
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-------hHHHHHHHHHHHhccCCCCceeEEEEEEcC
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-------RIKIVSEFITRIGTVRHKNLIRLLGFCYNR 513 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-------~~~~~~~e~~~l~~l~H~niv~l~g~~~~~ 513 (710)
+.+.|. ..+.||+|+||.||+|.. .+|+.||||.++.... ..+.+.+|++++++++|||||++++++.++
T Consensus 8 i~d~Y~--~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~ 85 (293)
T d1jksa_ 8 VDDYYD--TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK 85 (293)
T ss_dssp GGGTEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred cccCEE--EeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence 334455 778999999999999985 6899999999975321 256789999999999999999999999999
Q ss_pred CceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC----ceEEcccC
Q 005177 514 HQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM----EPHLAEFG 587 (710)
Q Consensus 514 ~~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~----~~kl~DfG 587 (710)
+..|+|||||++|+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+|||++.++ .+|++|||
T Consensus 86 ~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~---~ivHrDiKp~Nill~~~~~~~~~vkl~DfG 162 (293)
T d1jksa_ 86 TDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG 162 (293)
T ss_dssp SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred CEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhc---ceeecccccceEEEecCCCcccceEecchh
Confidence 999999999999999999965 678999999999999999999998 999999999999999776 49999999
Q ss_pred ccccccccCCC-CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCC
Q 005177 588 FKYLTQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS 666 (710)
Q Consensus 588 la~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (710)
+++........ ...++..|.+||......++.++||||+||++|||+||+.||.+..... ....+........
T Consensus 163 ~a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~------~~~~i~~~~~~~~ 236 (293)
T d1jksa_ 163 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE------TLANVSAVNYEFE 236 (293)
T ss_dssp TCEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHTTCCCCC
T ss_pred hhhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHH------HHHHHHhcCCCCC
Confidence 99876432211 2224555788899888889999999999999999999999987433211 1111111110000
Q ss_pred CcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 667 SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 667 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..........+.+++.+||+.||++|||++|++++
T Consensus 237 ~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 271 (293)
T d1jksa_ 237 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 271 (293)
T ss_dssp HHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred chhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11111223567789999999999999999999863
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-45 Score=378.87 Aligned_cols=237 Identities=18% Similarity=0.162 Sum_probs=192.8
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|.. .+|+.||||.++... ...+.+.+|++++++++|||||++++++.+++..|+|||||+
T Consensus 12 i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~ 91 (288)
T d1uu3a_ 12 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAK 91 (288)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEEEccC
Confidence 778999999999999985 679999999998532 235678999999999999999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC----C
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG----S 598 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~----~ 598 (710)
+|+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+|+....... .
T Consensus 92 gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~ 168 (288)
T d1uu3a_ 92 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 168 (288)
T ss_dssp TEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECC---------
T ss_pred CCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccc---cEEcCcCCccccccCCCceEEecccccceecccCCcccccc
Confidence 9999998865 678999999999999999999998 999999999999999999999999999987642211 1
Q ss_pred CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHH
Q 005177 599 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 678 (710)
Q Consensus 599 ~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (710)
...++..|++||+..+..++.++||||+||++|||+||+.||.+..... ....+.... ...+. .....+.
T Consensus 169 ~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~------~~~~i~~~~-~~~p~---~~s~~~~ 238 (288)
T d1uu3a_ 169 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL------IFQKIIKLE-YDFPE---KFFPKAR 238 (288)
T ss_dssp -CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHTTC-CCCCT---TCCHHHH
T ss_pred cccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHH------HHHHHHcCC-CCCCc---cCCHHHH
Confidence 1224566889999988899999999999999999999999997543211 111111111 11111 1234567
Q ss_pred HHHhhcCCCCCCCCCCHHHHH
Q 005177 679 DVALLCTRSTPSDRPSMEEAL 699 (710)
Q Consensus 679 ~l~~~Cl~~~p~~RPs~~evl 699 (710)
+++.+||+.||++|||++|+.
T Consensus 239 ~li~~~L~~dP~~R~t~~e~~ 259 (288)
T d1uu3a_ 239 DLVEKLLVLDATKRLGCEEME 259 (288)
T ss_dssp HHHHTTSCSSGGGSTTSGGGT
T ss_pred HHHHHHccCCHhHCcCHHHHc
Confidence 899999999999999999864
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2e-45 Score=381.80 Aligned_cols=240 Identities=20% Similarity=0.226 Sum_probs=191.9
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
.|+ ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+++..|+|
T Consensus 16 ~y~--~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 93 (309)
T d1u5ra_ 16 LFS--DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 93 (309)
T ss_dssp HEE--EEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred hcE--eeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEE
Confidence 355 778899999999999984 789999999997643 2346688999999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
||||++|++..++.. .+++.++..|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+......
T Consensus 94 ~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~- 169 (309)
T d1u5ra_ 94 MEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN- 169 (309)
T ss_dssp EECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBC-
T ss_pred EEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEECCCCCEEEeecccccccCCCC-
Confidence 999999999876643 679999999999999999999998 99999999999999999999999999998654322
Q ss_pred CCcccccccCchhhhhc---cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccc-cCCCcchHHH
Q 005177 598 SFPAKIAWTESGEFYNA---MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENE-VGSSSSLQDE 673 (710)
Q Consensus 598 ~~~~~~~~~~~~e~~~~---~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 673 (710)
...+++.|++||+..+ ..++.++|||||||++|||+||+.||.+...... ...+..... ...... .
T Consensus 170 -~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~------~~~i~~~~~~~~~~~~---~ 239 (309)
T d1u5ra_ 170 -SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------LYHIAQNESPALQSGH---W 239 (309)
T ss_dssp -CCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHHSCCCCCSCTT---S
T ss_pred -ccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHH------HHHHHhCCCCCCCCCC---C
Confidence 2234556788887753 4578899999999999999999999874332110 111111110 001111 1
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
...+.+++.+||+.||++|||++|+++
T Consensus 240 s~~~~~li~~~L~~dP~~Rpt~~ell~ 266 (309)
T d1u5ra_ 240 SEYFRNFVDSCLQKIPQDRPTSEVLLK 266 (309)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence 245778899999999999999999976
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-45 Score=381.20 Aligned_cols=246 Identities=23% Similarity=0.296 Sum_probs=192.7
Q ss_pred hhhhhcCCCCCccEEEEc-CCCc--EEEEEEeecc--chhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGI--TVSVKKIEWG--ATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~--~vAvK~l~~~--~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
..+.||+|+||.||+|.. .+|. .||||+++.. ....+.+.+|+++++++ +|||||+++|+|.+++..++||||+
T Consensus 14 ~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~ey~ 93 (309)
T d1fvra_ 14 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 93 (309)
T ss_dssp EEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred EEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEEEec
Confidence 567899999999999986 3444 5888988653 22456799999999998 7999999999999999999999999
Q ss_pred CCCChhhhhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcc
Q 005177 524 PNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 585 (710)
Q Consensus 524 ~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~D 585 (710)
++|+|.++++. .++|..+.+++.|||+||.|+|+. +|+||||||+|||++.++.+||+|
T Consensus 94 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~---~iiHrDlkp~NIL~~~~~~~kl~D 170 (309)
T d1fvra_ 94 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIAD 170 (309)
T ss_dssp TTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECC
T ss_pred CCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC---CccccccccceEEEcCCCceEEcc
Confidence 99999999863 468999999999999999999998 999999999999999999999999
Q ss_pred cCccccccccCCCC-cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccccccc
Q 005177 586 FGFKYLTQLADGSF-PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 664 (710)
Q Consensus 586 fGla~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (710)
||+++......... ..++..+.+||......++.++|||||||++|||+||+.|+..+..... ....+......
T Consensus 171 fG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~-----~~~~i~~~~~~ 245 (309)
T d1fvra_ 171 FGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-----LYEKLPQGYRL 245 (309)
T ss_dssp TTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-----HHHHGGGTCCC
T ss_pred ccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHH-----HHHHHHhcCCC
Confidence 99998654332222 2234446778888888899999999999999999998776543332211 11111111101
Q ss_pred CCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 665 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 665 ~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
..+. .....+.+++.+||+.||++||||+||++.|+++.
T Consensus 246 ~~~~---~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~ 284 (309)
T d1fvra_ 246 EKPL---NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 284 (309)
T ss_dssp CCCT---TBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCc---cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 1111 12345778899999999999999999999998764
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=7.2e-45 Score=384.39 Aligned_cols=249 Identities=18% Similarity=0.192 Sum_probs=198.9
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
+.+.|. ..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.+++..|+|
T Consensus 27 ~~d~Y~--i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 104 (352)
T d1koba_ 27 VYDYYD--ILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI 104 (352)
T ss_dssp GGGTEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEE
T ss_pred cccceE--EEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 444565 778999999999999985 689999999998653 3456788999999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec--CCCceEEcccCccccccc
Q 005177 520 YDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD--ENMEPHLAEFGFKYLTQL 594 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~--~~~~~kl~DfGla~~~~~ 594 (710)
||||++|+|.+++.. .+++.+...|+.||+.||+|||+. +|+||||||+|||++ .++.+||+|||+|+....
T Consensus 105 mE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~ 181 (352)
T d1koba_ 105 LEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 181 (352)
T ss_dssp EECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred EEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccccccccccccCCCeEEEeecccceecCC
Confidence 999999999988754 468999999999999999999998 999999999999998 578999999999987653
Q ss_pred cCCC-CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 595 ADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 595 ~~~~-~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
.... ...+++++.+||+.....++.++||||+||++|||+||+.||.+..... ....+...........+...
T Consensus 182 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~------~~~~i~~~~~~~~~~~~~~~ 255 (352)
T d1koba_ 182 DEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE------TLQNVKRCDWEFDEDAFSSV 255 (352)
T ss_dssp TSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHHCCCCCCSSTTTTS
T ss_pred CCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCCCCCCcccccCC
Confidence 3221 1224556778899888899999999999999999999999997443211 11111111100001111223
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
...+.+++.+|++.||++|||++|++++
T Consensus 256 s~~~~~li~~~L~~dp~~R~s~~eil~H 283 (352)
T d1koba_ 256 SPEAKDFIKNLLQKEPRKRLTVHDALEH 283 (352)
T ss_dssp CHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 3567789999999999999999999874
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-44 Score=370.84 Aligned_cols=244 Identities=16% Similarity=0.183 Sum_probs=184.9
Q ss_pred hhhhhcCCCCCccEEEEcC----CCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~----~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
..+.||+|+||.||+|+.. .+..||||.++... ...+.+.+|++++++++|||||+++|+|. ++..++||||+
T Consensus 11 l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv~E~~ 89 (273)
T d1mp8a_ 11 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELC 89 (273)
T ss_dssp EEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred EEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEEEEec
Confidence 6678999999999999853 24679999987532 23567999999999999999999999995 46789999999
Q ss_pred CCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC---
Q 005177 524 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--- 597 (710)
Q Consensus 524 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--- 597 (710)
++|++.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+|+.......
T Consensus 90 ~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~~~ 166 (273)
T d1mp8a_ 90 TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 166 (273)
T ss_dssp TTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC---------------
T ss_pred cCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhccc---CeeccccchhheeecCCCcEEEccchhheeccCCcceec
Confidence 99999998754 468999999999999999999998 999999999999999999999999999987543221
Q ss_pred CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHH
Q 005177 598 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 676 (710)
Q Consensus 598 ~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (710)
....++.+|.+||......++.++|||||||++|||+| |+.|+.+.... . ....+........++ .....
T Consensus 167 ~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~-~-----~~~~i~~~~~~~~~~---~~~~~ 237 (273)
T d1mp8a_ 167 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-D-----VIGRIENGERLPMPP---NCPPT 237 (273)
T ss_dssp ----CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-G-----HHHHHHTTCCCCCCT---TCCHH
T ss_pred cceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHH-H-----HHHHHHcCCCCCCCC---CCCHH
Confidence 11224456788899888899999999999999999998 66666543221 1 111111111111111 12345
Q ss_pred HHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 677 VLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 677 ~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
+.+++.+||+.||++||||.||++.|+.+.
T Consensus 238 ~~~li~~cl~~dp~~Rps~~ei~~~L~~i~ 267 (273)
T d1mp8a_ 238 LYSLMTKCWAYDPSRRPRFTELKAQLSTIL 267 (273)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 778999999999999999999999998764
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.6e-45 Score=371.32 Aligned_cols=245 Identities=19% Similarity=0.239 Sum_probs=184.3
Q ss_pred hhhhhcCCCCCccEEEEc--CCC--cEEEEEEeecc----chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVL--PTG--ITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~--~~g--~~vAvK~l~~~----~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
..+.||+|+||.||+|+. .++ ..||||+++.. ....+.|.+|++++++++|||||+++|+|.+ +..++|||
T Consensus 12 ~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~lv~e 90 (273)
T d1u46a_ 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTE 90 (273)
T ss_dssp EEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred EEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchheeee
Confidence 667899999999999985 333 47999999753 2235678999999999999999999999975 46789999
Q ss_pred ecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC
Q 005177 522 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 598 (710)
Q Consensus 522 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 598 (710)
||++|++.+++.. .+++..+.+++.|+|+||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 91 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~ 167 (273)
T d1u46a_ 91 LAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167 (273)
T ss_dssp CCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCE
T ss_pred eecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhC---CEeeeeecHHHhccccccceeeccchhhhhcccCCCc
Confidence 9999999988753 589999999999999999999998 9999999999999999999999999999875432211
Q ss_pred -----CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHH
Q 005177 599 -----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 672 (710)
Q Consensus 599 -----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (710)
...+..++.+||......++.++|||||||++|||+| |+.||.+..... ....+...... .+....
T Consensus 168 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~------~~~~i~~~~~~--~~~~~~ 239 (273)
T d1u46a_ 168 YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ------ILHKIDKEGER--LPRPED 239 (273)
T ss_dssp EEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHHHTSCCC--CCCCTT
T ss_pred ceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHH------HHHHHHhCCCC--CCCccc
Confidence 1123344678888888889999999999999999998 788876432111 11111111100 001111
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 673 EIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
....+.+++.+||+.||++||||.||.+.|++++
T Consensus 240 ~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~~ 273 (273)
T d1u46a_ 240 CPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 273 (273)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred ccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcC
Confidence 2245778999999999999999999999998753
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-44 Score=373.62 Aligned_cols=247 Identities=17% Similarity=0.229 Sum_probs=196.1
Q ss_pred hhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
..+.||+|+||.||+|.. .+++.||||+++... .....|.+|++++++++|||||+++|+|..++..++|||
T Consensus 24 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e 103 (308)
T d1p4oa_ 24 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 103 (308)
T ss_dssp EEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCceeEEEe
Confidence 667899999999999985 246799999998643 234568999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhc------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcc
Q 005177 522 YLPNGNLSEKIRT------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK 589 (710)
Q Consensus 522 y~~~gsL~~~l~~------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla 589 (710)
||++|+|.++++. ..+|..+.+|+.|+|+||.|||+. +|+||||||+|||+|+++++||+|||++
T Consensus 104 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~---~ivHrDlk~~NiLld~~~~~Kl~DFGla 180 (308)
T d1p4oa_ 104 LMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 180 (308)
T ss_dssp CCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEECCTTCC
T ss_pred ecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeeceEcCCceeecCCceEEEeecccc
Confidence 9999999999864 358899999999999999999998 9999999999999999999999999999
Q ss_pred ccccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccC
Q 005177 590 YLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 665 (710)
Q Consensus 590 ~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (710)
+........ ...+...+.+||......++.++|||||||++|||+||+.|+..+..... ....+.+.....
T Consensus 181 ~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~-----~~~~i~~~~~~~ 255 (308)
T d1p4oa_ 181 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ-----VLRFVMEGGLLD 255 (308)
T ss_dssp CGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH-----HHHHHHTTCCCC
T ss_pred eeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHhCCCCC
Confidence 866432221 11133446677888888899999999999999999999755543332211 112222222111
Q ss_pred CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 666 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 666 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
.+. .....+.+++.+||+.+|++||||+||+++|++..+
T Consensus 256 ~p~---~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~ 294 (308)
T d1p4oa_ 256 KPD---NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 294 (308)
T ss_dssp CCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred Ccc---cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 111 122457789999999999999999999999987644
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-44 Score=372.78 Aligned_cols=246 Identities=22% Similarity=0.242 Sum_probs=182.6
Q ss_pred hhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccc--hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcC-CceeEE
Q 005177 450 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNR-HQAYLL 519 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~-~~~~lv 519 (710)
..+.||+|+||.||+|.. .+++.||||+++... ...+.+.+|++.+.++ +|+|||.+++++.++ +..++|
T Consensus 17 ~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~~iv 96 (299)
T d1ywna1 17 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 96 (299)
T ss_dssp EEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEE
T ss_pred EeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCeEEEE
Confidence 678899999999999974 346789999997543 3355677777777776 689999999998765 468999
Q ss_pred EeecCCCChhhhhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCce
Q 005177 520 YDYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 581 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ 581 (710)
||||++|+|.++++. .++|.++..++.|||+||+|||+. +|+||||||+|||+++++.+
T Consensus 97 ~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~ivHrDlKp~NILl~~~~~~ 173 (299)
T d1ywna1 97 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVV 173 (299)
T ss_dssp EECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCE
T ss_pred EEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC---CCcCCcCCccceeECCCCcE
Confidence 999999999999863 257899999999999999999998 99999999999999999999
Q ss_pred EEcccCccccccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccc
Q 005177 582 HLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGE 657 (710)
Q Consensus 582 kl~DfGla~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~ 657 (710)
||+|||+|+........ ...++..|.+||......++.++|||||||++|||+||+.|++.+......... .+.
T Consensus 174 Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~-~~~- 251 (299)
T d1ywna1 174 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR-RLK- 251 (299)
T ss_dssp EECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHH-HHH-
T ss_pred EEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHH-HHh-
Confidence 99999999865432211 122455677889888889999999999999999999987654433222111110 011
Q ss_pred cccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 658 MYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
+......+. ....++.+++.+||+.||++||||+|++++|+++
T Consensus 252 --~~~~~~~~~---~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~i 294 (299)
T d1ywna1 252 --EGTRMRAPD---YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 294 (299)
T ss_dssp --HTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --cCCCCCCCc---cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 111011111 1234577899999999999999999999999876
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-44 Score=378.56 Aligned_cols=249 Identities=16% Similarity=0.188 Sum_probs=198.0
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEE
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 520 (710)
+.++|. ..+.||+|+||.||+|.. .+|+.||||.++........+.+|+++|++++|||||++++++.+++..|+||
T Consensus 3 ~~~rY~--i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvm 80 (321)
T d1tkia_ 3 LYEKYM--IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIF 80 (321)
T ss_dssp CTTTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEE
T ss_pred CccceE--EEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 344555 778999999999999985 67999999999877666777899999999999999999999999999999999
Q ss_pred eecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC--CceEEcccCcccccccc
Q 005177 521 DYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN--MEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 521 Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~--~~~kl~DfGla~~~~~~ 595 (710)
|||++|+|.+++.. .+++.+...|+.|++.||+|||+. +|+||||||+|||++.+ ..+||+|||+++.....
T Consensus 81 E~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~---~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~ 157 (321)
T d1tkia_ 81 EFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG 157 (321)
T ss_dssp CCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred ecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHc---CCCcccccccceeecCCCceEEEEcccchhhccccC
Confidence 99999999999975 468889999999999999999998 99999999999999854 58999999998865432
Q ss_pred CCC-CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 596 DGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 596 ~~~-~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
... ...+.+++.+||......++.++||||+||++|||+||+.||.+.... .....+...........+....
T Consensus 158 ~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~------~~~~~i~~~~~~~~~~~~~~~s 231 (321)
T d1tkia_ 158 DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ------QIIENIMNAEYTFDEEAFKEIS 231 (321)
T ss_dssp CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHHTCCCCCHHHHTTSC
T ss_pred CcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCCCCChhhccCCC
Confidence 111 112345567778877888899999999999999999999998754321 1111222211111011111223
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.++.+++.+|++.||++|||++|++++
T Consensus 232 ~~~~~li~~~L~~dp~~R~s~~eil~h 258 (321)
T d1tkia_ 232 IEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 567889999999999999999999873
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-44 Score=374.27 Aligned_cols=244 Identities=16% Similarity=0.228 Sum_probs=188.8
Q ss_pred hhhhhcCCCCCccEEEEc-CCCc----EEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGI----TVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~----~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
..+.||+|+||.||+|.. .+|+ .||||+++... ...+.|.+|++++++++|||||+++|+|.++ ..+++|||
T Consensus 13 ~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~v~e~ 91 (317)
T d1xkka_ 13 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQL 91 (317)
T ss_dssp EEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEEEEC
T ss_pred EeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeEEEEe
Confidence 778999999999999985 4554 68999987532 3467899999999999999999999999864 56889999
Q ss_pred cCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC
Q 005177 523 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 599 (710)
Q Consensus 523 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 599 (710)
+.+|+|.+.+.. ..+|..+.+|+.|||+||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 92 ~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~---~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~ 168 (317)
T d1xkka_ 92 MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 168 (317)
T ss_dssp CTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC--
T ss_pred ccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHc---CcccCcchhhcceeCCCCCeEeeccccceecccccccc
Confidence 999999998864 578999999999999999999998 99999999999999999999999999998764322211
Q ss_pred ----cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 600 ----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 600 ----~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
..++..|.+||......++.++|||||||++|||+| |+.|+.+ ..... ....+........++. ..
T Consensus 169 ~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~-~~~~~-----~~~~i~~~~~~~~p~~---~~ 239 (317)
T d1xkka_ 169 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-IPASE-----ISSILEKGERLPQPPI---CT 239 (317)
T ss_dssp ------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT-SCGGG-----HHHHHHHTCCCCCCTT---BC
T ss_pred cccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCC-CCHHH-----HHHHHHcCCCCCCCcc---cC
Confidence 113445778898888899999999999999999999 5555543 22111 1111111111111111 23
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
..+.+++.+||+.||++||||.|+++.|+.+.
T Consensus 240 ~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~ 271 (317)
T d1xkka_ 240 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 271 (317)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCChhhCcCHHHHHHHHHHHH
Confidence 45778999999999999999999999987653
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=6.5e-44 Score=364.70 Aligned_cols=243 Identities=21% Similarity=0.218 Sum_probs=191.8
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----------hHHHHHHHHHHHhccC-CCCceeEEEEEEcCCcee
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----------RIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----------~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~ 517 (710)
..+.||+|+||+||+|+. .+|+.||||+++.... ..+.+.+|++++++++ |||||++++++.+++..|
T Consensus 7 ~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~ 86 (277)
T d1phka_ 7 PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFF 86 (277)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred EceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCcceE
Confidence 678999999999999985 7899999999976321 1346888999999997 999999999999999999
Q ss_pred EEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 518 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
||||||++|||.++++. .+++.+...++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 87 ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~ 163 (277)
T d1phka_ 87 LVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG 163 (277)
T ss_dssp EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred EEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc---CCcccccccceEEEcCCCCeEEccchheeEccCC
Confidence 99999999999999964 678999999999999999999998 9999999999999999999999999999876432
Q ss_pred CC-CCcccccccCchhhhhc------cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCc
Q 005177 596 DG-SFPAKIAWTESGEFYNA------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 668 (710)
Q Consensus 596 ~~-~~~~~~~~~~~~e~~~~------~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (710)
.. ....++..+.+||+... ..++.++||||+||++|||+||+.||.+..... . ...+.........+
T Consensus 164 ~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~--~----~~~i~~~~~~~~~~ 237 (277)
T d1phka_ 164 EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML--M----LRMIMSGNYQFGSP 237 (277)
T ss_dssp CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--H----HHHHHHTCCCCCTT
T ss_pred CceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHH--H----HHHHHhCCCCCCCc
Confidence 11 11223444666776542 346788999999999999999999997543211 0 11111111111111
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 669 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 669 ~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
......+++.+++.+|++.||++|||++||+++
T Consensus 238 ~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h 270 (277)
T d1phka_ 238 EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 270 (277)
T ss_dssp TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred ccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 222334567899999999999999999999764
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=1.1e-43 Score=371.48 Aligned_cols=298 Identities=29% Similarity=0.503 Sum_probs=230.5
Q ss_pred CChhhHHHHHHHHhhCCCCCCCCCCCCCCCCCCCCCCCCCc--eeeeeeeCCCC--CcEEEEEcCCCCCcc--cCCcchh
Q 005177 23 ANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYAC--SWSGVKCNKNN--TIVVGINLSMKGLSG--ALPGKPL 96 (710)
Q Consensus 23 ~~~~~~~all~~k~~~~~~~~~l~~w~~~~~~~~~~~~~~C--~w~gv~C~~~~--~~v~~l~l~~~~l~g--~~~~~~~ 96 (710)
|.++|++||++||+++.|| ..+++|.. ++||| .|.||+|+..+ ++|+.++|+++++.| .+|+.++
T Consensus 3 c~~~e~~aLl~~k~~~~~~-~~l~sW~~--------~~d~C~~~w~gv~C~~~~~~~~v~~L~L~~~~l~g~~~lp~~l~ 73 (313)
T d1ogqa_ 3 CNPQDKQALLQIKKDLGNP-TTLSSWLP--------TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLA 73 (313)
T ss_dssp SCHHHHHHHHHHHHHTTCC-GGGTTCCT--------TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGG
T ss_pred CCHHHHHHHHHHHHHCCCC-CcCCCCCC--------CCCCCCCcCCCeEEeCCCCcEEEEEEECCCCCCCCCCCCChHHh
Confidence 6789999999999999887 47999974 56899 59999998643 379999988888877 4677777
Q ss_pred hhcCCCCcEEECCC-CcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCC
Q 005177 97 RIFFNELVDLNLSH-NSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHL 175 (710)
Q Consensus 97 ~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L 175 (710)
. +++|++|||++ |+++|.+|.+|+++++|++|+|++|++.+..|..+..+.+|+++++++|.+.+.+|..++++++|
T Consensus 74 ~--L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L 151 (313)
T d1ogqa_ 74 N--LPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNL 151 (313)
T ss_dssp G--CTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTC
T ss_pred c--CccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCccc
Confidence 7 77888888875 67777777777777788888888777777777777777777777777777777777777777777
Q ss_pred CEEEccCCCCCCCCCcccCCCCCC-CeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhcccc
Q 005177 176 KVLNLAGSYFSGPIPSQFGSFKSL-EFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAG 254 (710)
Q Consensus 176 ~~L~L~~n~l~~~~p~~~~~l~~L-~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~ 254 (710)
+++++++|.+++.+|..+..+.++ +.++++.|++++..|.. ++++.. ..+++++
T Consensus 152 ~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~------------------------~~~l~~-~~l~l~~ 206 (313)
T d1ogqa_ 152 VGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPT------------------------FANLNL-AFVDLSR 206 (313)
T ss_dssp CEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGG------------------------GGGCCC-SEEECCS
T ss_pred ceeecccccccccccccccccccccccccccccccccccccc------------------------cccccc-ccccccc
Confidence 777777777777777777666665 56666666665555544 444333 3466777
Q ss_pred ccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCC
Q 005177 255 ANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVP 334 (710)
Q Consensus 255 n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p 334 (710)
+...+.+|..+..+++|+.+++++|.+.+.+| .+..+++|+.|+|++|+++|.+|.+|+++++|++|+|++|+++|.+|
T Consensus 207 ~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP 285 (313)
T d1ogqa_ 207 NMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp SEEEECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECC
T ss_pred cccccccccccccccccccccccccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCC
Confidence 77777777777778888888888888877655 56777888888888888888888888888889999999998888888
Q ss_pred cccCCCCCCcEEeccCCC-CCCC-CC
Q 005177 335 ESLVQLPSLEILFIWNNY-FSGS-LP 358 (710)
Q Consensus 335 ~~~~~l~~L~~L~L~~N~-l~g~-~p 358 (710)
. ++.+++|+.+++++|+ +.|. +|
T Consensus 286 ~-~~~L~~L~~l~l~~N~~l~g~plp 310 (313)
T d1ogqa_ 286 Q-GGNLQRFDVSAYANNKCLCGSPLP 310 (313)
T ss_dssp C-STTGGGSCGGGTCSSSEEESTTSS
T ss_pred C-cccCCCCCHHHhCCCccccCCCCC
Confidence 4 5778888888898887 5554 44
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-43 Score=372.92 Aligned_cols=242 Identities=12% Similarity=0.082 Sum_probs=196.2
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
+|. ..+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|+++|++++|||||++++++.+++..|+|
T Consensus 6 dy~--~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv 83 (337)
T d1o6la_ 6 DFD--YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hcE--EEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence 355 778999999999999985 789999999998642 2356788999999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
||||++|+|.+++.. ..+......++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+.......
T Consensus 84 ~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~ 160 (337)
T d1o6la_ 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred eeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhc---CccccccCHHHeEecCCCCEEEeecccccccccCCc
Confidence 999999999999975 567788889999999999999999 999999999999999999999999999986543222
Q ss_pred C--CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHH
Q 005177 598 S--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 675 (710)
Q Consensus 598 ~--~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (710)
. ...++++|.+||+..+..++.++||||+||++|||+||+.||.+..... ....+.... ...+. ....
T Consensus 161 ~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~------~~~~i~~~~-~~~p~---~~s~ 230 (337)
T d1o6la_ 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER------LFELILMEE-IRFPR---TLSP 230 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-CCCCT---TSCH
T ss_pred ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHH------HHHHHhcCC-CCCCc---cCCH
Confidence 1 2235667889999998999999999999999999999999987543211 111111111 11111 1234
Q ss_pred HHHHHHhhcCCCCCCCCCC-----HHHHHHH
Q 005177 676 LVLDVALLCTRSTPSDRPS-----MEEALKL 701 (710)
Q Consensus 676 ~~~~l~~~Cl~~~p~~RPs-----~~evl~~ 701 (710)
++.+++.+|++.||++||+ ++|++++
T Consensus 231 ~~~dli~~~L~~dP~~R~~~~~~~~~eil~H 261 (337)
T d1o6la_ 231 EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp HHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred HHHHHHHhhccCCchhhcccccccHHHHHcC
Confidence 5678999999999999995 7888763
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.1e-43 Score=370.09 Aligned_cols=238 Identities=17% Similarity=0.179 Sum_probs=194.6
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.+++..|+|||||+
T Consensus 8 i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~ 87 (316)
T d1fota_ 8 ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIE 87 (316)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEeeecC
Confidence 678999999999999985 679999999998532 235678899999999999999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCccc
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK 602 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~ 602 (710)
+|++.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+......... .+
T Consensus 88 gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~-~G 163 (316)
T d1fota_ 88 GGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTL-CG 163 (316)
T ss_dssp SCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCC-CS
T ss_pred CccccccccccccccccHHHHHHHHHHHhhhhhccC---cEEccccCchheeEcCCCCEEEecCccceEeccccccc-cC
Confidence 9999998865 557888889999999999999998 99999999999999999999999999998765433322 34
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
++.|++||...+..++.++||||+||++|||+||+.||.+..... ....+.... ...++.. ...+.+++.
T Consensus 164 t~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~------~~~~i~~~~-~~~p~~~---s~~~~~li~ 233 (316)
T d1fota_ 164 TPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK------TYEKILNAE-LRFPPFF---NEDVKDLLS 233 (316)
T ss_dssp CTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHHCC-CCCCTTS---CHHHHHHHH
T ss_pred cccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHH------HHHHHHcCC-CCCCCCC---CHHHHHHHH
Confidence 556788899888889999999999999999999999997543211 111111111 1111111 245678889
Q ss_pred hcCCCCCCCCC-----CHHHHHHH
Q 005177 683 LCTRSTPSDRP-----SMEEALKL 701 (710)
Q Consensus 683 ~Cl~~~p~~RP-----s~~evl~~ 701 (710)
+|++.||++|| |++|++++
T Consensus 234 ~~L~~dp~~R~~~~r~t~~~il~H 257 (316)
T d1fota_ 234 RLITRDLSQRLGNLQNGTEDVKNH 257 (316)
T ss_dssp HHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHhhhCHHhccccchhhHHHHHcC
Confidence 99999999996 89998764
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-43 Score=367.42 Aligned_cols=245 Identities=22% Similarity=0.256 Sum_probs=188.0
Q ss_pred hhhhhcCCCCCccEEEEc--------CCCcEEEEEEeeccch--hHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeE
Q 005177 450 ECEEAARPQSAAGCKAVL--------PTGITVSVKKIEWGAT--RIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~--------~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 518 (710)
..+.||+|+||.||+|+. .++..||||+++.... ....+.+|+..+.++ +|||||+++|+|.+++..++
T Consensus 17 l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~~~~~ 96 (299)
T d1fgka_ 17 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV 96 (299)
T ss_dssp EEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred EeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCCeEEE
Confidence 567899999999999974 2245899999976533 356788888888888 89999999999999999999
Q ss_pred EEeecCCCChhhhhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc
Q 005177 519 LYDYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~ 580 (710)
|||||++|+|.+++.. .+++.++.+++.|+|.||+|||+. +|+||||||+|||++.++.
T Consensus 97 v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~---~ivHrDiKp~NiLl~~~~~ 173 (299)
T d1fgka_ 97 IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNV 173 (299)
T ss_dssp EECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCC
T ss_pred EEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC---CEEeeeecccceeecCCCC
Confidence 9999999999999963 368999999999999999999999 9999999999999999999
Q ss_pred eEEcccCccccccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHhC-CCCCCCCCCCCcccccccc
Q 005177 581 PHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTN-GRLTNAGSSLQNKPIDGLL 655 (710)
Q Consensus 581 ~kl~DfGla~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg-~~p~~~~~~~~~~~~~~~~ 655 (710)
+||+|||+++........ ...+...|.+||......++.++|||||||++|||+|+ +.|+. +..... ..
T Consensus 174 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~-~~~~~~-----~~ 247 (299)
T d1fgka_ 174 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP-GVPVEE-----LF 247 (299)
T ss_dssp EEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST-TCCHHH-----HH
T ss_pred eEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCC-CCCHHH-----HH
Confidence 999999999876433211 12234446778888888999999999999999999995 55554 222111 11
Q ss_pred cccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 656 GEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
..+.+......+.. ....+.+++.+||+.||++||||.||++.|+++-
T Consensus 248 ~~i~~~~~~~~p~~---~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~ 295 (299)
T d1fgka_ 248 KLLKEGHRMDKPSN---CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 295 (299)
T ss_dssp HHHHTTCCCCCCSS---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHcCCCCCCCcc---chHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHh
Confidence 11111111111111 2245778999999999999999999999998763
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-43 Score=370.07 Aligned_cols=245 Identities=20% Similarity=0.250 Sum_probs=195.2
Q ss_pred hhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccc--hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 520 (710)
..+.||+|+||.||+|+. .+++.||||+++... .....+.+|+.+++++ +|||||+++|+|.+++..++||
T Consensus 27 l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~lvm 106 (311)
T d1t46a_ 27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 106 (311)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred EeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEEEEEE
Confidence 567899999999999974 467899999998643 3456788999999998 6999999999999999999999
Q ss_pred eecCCCChhhhhhc--------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc
Q 005177 521 DYLPNGNLSEKIRT--------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580 (710)
Q Consensus 521 Ey~~~gsL~~~l~~--------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~ 580 (710)
|||++|+|.++++. .+++..+.+++.|||+||+|||++ +|+||||||+||+++.++.
T Consensus 107 E~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~---~ivHrDLKp~NIl~~~~~~ 183 (311)
T d1t46a_ 107 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRI 183 (311)
T ss_dssp ECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEETTTE
T ss_pred EcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccccccccccccCc
Confidence 99999999999864 367889999999999999999999 9999999999999999999
Q ss_pred eEEcccCccccccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccc
Q 005177 581 PHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLG 656 (710)
Q Consensus 581 ~kl~DfGla~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~ 656 (710)
+|++|||+++........ ...++..|.+||......++.++|||||||++|||+|++.|+......... +.
T Consensus 184 ~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~-----~~ 258 (311)
T d1t46a_ 184 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-----FY 258 (311)
T ss_dssp EEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH-----HH
T ss_pred ccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHH-----HH
Confidence 999999999876432221 112344466778888888999999999999999999977776644332211 11
Q ss_pred ccccccc-cCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 657 EMYNENE-VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 657 ~~~~~~~-~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
++++... ...+.. ....+.+++.+||+.||++||||.||+++|+++
T Consensus 259 ~~i~~~~~~~~~~~---~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~ 305 (311)
T d1t46a_ 259 KMIKEGFRMLSPEH---APAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305 (311)
T ss_dssp HHHHHTCCCCCCTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHhcCCCCCCccc---ccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence 1111110 111111 224577899999999999999999999999764
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=1.6e-43 Score=375.95 Aligned_cols=244 Identities=11% Similarity=0.064 Sum_probs=190.1
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHH---HHHHHHhccCCCCceeEEEEEEcCCce
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVS---EFITRIGTVRHKNLIRLLGFCYNRHQA 516 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~---~e~~~l~~l~H~niv~l~g~~~~~~~~ 516 (710)
+|. ..+.||+|+||.||+|+. .+|+.||||++..... ....+. +|+++++.++|||||++++++.+++..
T Consensus 5 dy~--i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~ 82 (364)
T d1omwa3 5 DFS--VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 82 (364)
T ss_dssp TEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hCe--eeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence 355 678999999999999985 6799999999975321 122333 346777888999999999999999999
Q ss_pred eEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccc
Q 005177 517 YLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 594 (710)
Q Consensus 517 ~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~ 594 (710)
|+|||||++|+|.+++.. ..++.....++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+....
T Consensus 83 ~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~ 159 (364)
T d1omwa3 83 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSK 159 (364)
T ss_dssp EEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSSSCEEECCCTTCEECSS
T ss_pred EEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHC---CccceeeccceeEEcCCCcEEEeeeceeeecCC
Confidence 999999999999999965 567888999999999999999998 999999999999999999999999999987654
Q ss_pred cCCCCcccccccCchhhhh-ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 595 ADGSFPAKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 595 ~~~~~~~~~~~~~~~e~~~-~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
.......+++.|.+||+.. ...++.++||||+||++|||+||+.||.+........ ......... ...+. ..
T Consensus 160 ~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~---~~~~~~~~~-~~~~~---~~ 232 (364)
T d1omwa3 160 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE---IDRMTLTMA-VELPD---SF 232 (364)
T ss_dssp SCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHH---HHHHSSSCC-CCCCS---SS
T ss_pred CcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHhcccCC-CCCCC---CC
Confidence 4333334566677888775 4568999999999999999999999997543211100 011111111 11111 12
Q ss_pred HHHHHHHHhhcCCCCCCCCCC-----HHHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPS-----MEEALK 700 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs-----~~evl~ 700 (710)
...+.+++.+||+.||++||| ++|+++
T Consensus 233 s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~ 264 (364)
T d1omwa3 233 SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 264 (364)
T ss_dssp CHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred CHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence 345778999999999999999 588865
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=3.6e-44 Score=368.02 Aligned_cols=253 Identities=16% Similarity=0.139 Sum_probs=195.4
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCC----
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH---- 514 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~---- 514 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||.++... ...+.+.+|++++++++|||||++++++...+
T Consensus 7 drY~--i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~ 84 (277)
T d1o6ya_ 7 DRYE--LGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 84 (277)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSE
T ss_pred ceeE--EeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCc
Confidence 3455 678999999999999985 789999999997532 23557899999999999999999999998754
Q ss_pred ceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccc
Q 005177 515 QAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 592 (710)
Q Consensus 515 ~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~ 592 (710)
..|+||||+++|+|.+++.. .+++.+...|+.|++.||+|||+. +|+||||||+|||++.++..+++|||.++..
T Consensus 85 ~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~ 161 (277)
T d1o6ya_ 85 LPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI 161 (277)
T ss_dssp EEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTSCEEECCCTTCEEC
T ss_pred eEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCccccCcccccCccccceeehhhhhhhh
Confidence 37999999999999998865 678999999999999999999998 9999999999999999999999999988754
Q ss_pred cccCC-----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCC
Q 005177 593 QLADG-----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSS 667 (710)
Q Consensus 593 ~~~~~-----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (710)
..... ....+++.|++||...+..++.++||||+||++|||+||+.||.+..... ...+..........
T Consensus 162 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~------~~~~~~~~~~~~~~ 235 (277)
T d1o6ya_ 162 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS------VAYQHVREDPIPPS 235 (277)
T ss_dssp C----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHCCCCCGG
T ss_pred ccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHH------HHHHHHhcCCCCCc
Confidence 32211 11224566888999888889999999999999999999999987433211 01111111100000
Q ss_pred cchHHHHHHHHHHHhhcCCCCCCCCC-CHHHHHHHHhccCC
Q 005177 668 SSLQDEIKLVLDVALLCTRSTPSDRP-SMEEALKLLSGLKP 707 (710)
Q Consensus 668 ~~~~~~~~~~~~l~~~Cl~~~p~~RP-s~~evl~~L~~~~~ 707 (710)
....+....+.+++.+|++.||++|| |++|+.+.|.+++.
T Consensus 236 ~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~n 276 (277)
T d1o6ya_ 236 ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 276 (277)
T ss_dssp GTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHC
T ss_pred hhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHhC
Confidence 00111234567888999999999999 89999999887753
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-43 Score=370.45 Aligned_cols=249 Identities=15% Similarity=0.190 Sum_probs=191.8
Q ss_pred hhhcCCchhh-hhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhcc-CCCCceeEEEEEEc----CC
Q 005177 442 VLRSFNSTEC-EEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYN----RH 514 (710)
Q Consensus 442 ~~~~~~~~~~-~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~----~~ 514 (710)
+.++|. .. +.||+|+||.||+|.. .+|+.||||+++.. +.+.+|++++.++ +|||||+++++|.+ +.
T Consensus 9 i~~~y~--i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~ 82 (335)
T d2ozaa1 9 IIDDYK--VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYAGRK 82 (335)
T ss_dssp GGGTEE--EEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred cccCEE--EeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCC
Confidence 445554 44 4699999999999985 78999999999743 4567788886654 79999999999875 45
Q ss_pred ceeEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC---CCceEEcccC
Q 005177 515 QAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLAEFG 587 (710)
Q Consensus 515 ~~~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~---~~~~kl~DfG 587 (710)
..|+|||||++|+|.+++.. .+++.+...|+.|+++||+|||+. +|+||||||+|||+++ ++.+||+|||
T Consensus 83 ~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~---~iiHRDiKp~NIll~~~~~~~~~Kl~DFG 159 (335)
T d2ozaa1 83 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 159 (335)
T ss_dssp EEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSTTCCEEECCCT
T ss_pred EEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHc---CCccccccccccccccccccccccccccc
Confidence 68999999999999999965 367889999999999999999998 9999999999999986 4679999999
Q ss_pred ccccccccCC-CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCC
Q 005177 588 FKYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS 666 (710)
Q Consensus 588 la~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (710)
+|+....... ....++++|.+||+.....++.++||||+||++|||+||+.||.+........ .....+........
T Consensus 160 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~--~~~~~i~~~~~~~~ 237 (335)
T d2ozaa1 160 FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP--GMKTRIRMGQYEFP 237 (335)
T ss_dssp TCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC----------CCCSCSSSCC
T ss_pred eeeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHH--HHHHHHhcCCCCCC
Confidence 9987643322 22335666888898888889999999999999999999999997543221100 01111111110111
Q ss_pred CcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 667 SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 667 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+.......++.+++.+|++.||++|||+.|++++
T Consensus 238 ~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 272 (335)
T d2ozaa1 238 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 272 (335)
T ss_dssp TTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 22233445678899999999999999999999874
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-43 Score=364.48 Aligned_cols=247 Identities=22% Similarity=0.212 Sum_probs=186.4
Q ss_pred hhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchh------HHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeec
Q 005177 451 CEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATR------IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 451 ~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~------~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
.++||+|+||+||+|.. .+|+.||||+++..... .+.+.+|++++++++|||||++++++.+++..|+||||+
T Consensus 3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~ 82 (299)
T d1ua2a_ 3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM 82 (299)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhh
Confidence 46799999999999996 67999999999754321 356889999999999999999999999999999999999
Q ss_pred CCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--C
Q 005177 524 PNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--F 599 (710)
Q Consensus 524 ~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~ 599 (710)
++|++..+... .+++.....++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++........ .
T Consensus 83 ~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~~ 159 (299)
T d1ua2a_ 83 ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTH 159 (299)
T ss_dssp SEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCC
T ss_pred cchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcc---ceecccCCcceEEecCCCccccccCccccccCCCcccccc
Confidence 98887777654 467788899999999999999998 9999999999999999999999999999865432222 1
Q ss_pred cccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCC---------------cccccccccccccccc
Q 005177 600 PAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKPIDGLLGEMYNENE 663 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~---------------~~~~~~~~~~~~~~~~ 663 (710)
..++.+|.+||+... ..++.++||||+||++|||+||+.||.+..... .|..............
T Consensus 160 ~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (299)
T d1ua2a_ 160 QVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKS 239 (299)
T ss_dssp SCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCC
T ss_pred eecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhcc
Confidence 224566788887654 457999999999999999999998886432110 0100000000000000
Q ss_pred cCCCcchH----HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 664 VGSSSSLQ----DEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 664 ~~~~~~~~----~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.. ..... .....+.+++.+|++.||++|||++|++++
T Consensus 240 ~~-~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H 280 (299)
T d1ua2a_ 240 FP-GIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 280 (299)
T ss_dssp CC-CCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CC-CCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence 00 00011 123567899999999999999999999874
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=8.6e-43 Score=368.35 Aligned_cols=241 Identities=13% Similarity=0.112 Sum_probs=196.9
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
++|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+.+..++
T Consensus 41 d~y~--i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~ 118 (350)
T d1rdqe_ 41 DQFD--RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118 (350)
T ss_dssp GGEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCeE--EEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccc
Confidence 3455 778999999999999985 689999999997532 235678899999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC
Q 005177 519 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 596 (710)
||||+.+|+|.+++.. .+++.....|+.|+++||+|||+. +||||||||+|||++.++.+||+|||+|+......
T Consensus 119 v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~---~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~ 195 (350)
T d1rdqe_ 119 VMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195 (350)
T ss_dssp EEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB
T ss_pred ccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCcCCHHHcccCCCCCEEeeeceeeeeccccc
Confidence 9999999999999865 678899999999999999999998 99999999999999999999999999998765432
Q ss_pred CCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHH
Q 005177 597 GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 676 (710)
Q Consensus 597 ~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (710)
.. ..+++.|++||++.+..++.++||||+||++|||+||+.||.+..... ....+.... ...+. .....
T Consensus 196 ~~-~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~------~~~~i~~~~-~~~p~---~~s~~ 264 (350)
T d1rdqe_ 196 WT-LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSGK-VRFPS---HFSSD 264 (350)
T ss_dssp CC-CEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-CCCCT---TCCHH
T ss_pred cc-ccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHH------HHHHHhcCC-CCCCc---cCCHH
Confidence 22 235566888999988889999999999999999999999997432111 111111111 11111 12345
Q ss_pred HHHHHhhcCCCCCCCCC-----CHHHHHH
Q 005177 677 VLDVALLCTRSTPSDRP-----SMEEALK 700 (710)
Q Consensus 677 ~~~l~~~Cl~~~p~~RP-----s~~evl~ 700 (710)
+.+++.+|++.||++|+ |++|+++
T Consensus 265 ~~~li~~~L~~dP~kR~~~~r~t~~ell~ 293 (350)
T d1rdqe_ 265 LKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHHHHHhhhCHHhccccccccHHHHHc
Confidence 67889999999999994 8999875
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-42 Score=356.81 Aligned_cols=253 Identities=18% Similarity=0.222 Sum_probs=188.7
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.||+|+||.||+|+. .+|+.||||+++.... ..+.+.+|++++++++|||||++++++.+++..|+||||+.+
T Consensus 6 ~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~~~ 85 (298)
T d1gz8a_ 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 85 (298)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEeecCC
Confidence 778999999999999985 7899999999975432 256788999999999999999999999999999999999986
Q ss_pred CChhhhhh-c---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--C
Q 005177 526 GNLSEKIR-T---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--F 599 (710)
Q Consensus 526 gsL~~~l~-~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~ 599 (710)
+ +.+.+. . .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+........ .
T Consensus 86 ~-~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~---~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~~~ 161 (298)
T d1gz8a_ 86 D-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 161 (298)
T ss_dssp E-HHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTC
T ss_pred c-hhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcC---CEEccccCchheeecccCcceeccCCcceeccCCccccee
Confidence 4 444442 2 578999999999999999999998 9999999999999999999999999999876432211 1
Q ss_pred cccccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCCCCCCCC---------------cccccccccccccccc
Q 005177 600 PAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKPIDGLLGEMYNENE 663 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~---------------~~~~~~~~~~~~~~~~ 663 (710)
..++..+.+||..... ..+.++||||+||++|||++|+.||.+..... .+.......+......
T Consensus 162 ~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (298)
T d1gz8a_ 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241 (298)
T ss_dssp CBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSC
T ss_pred ecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccc
Confidence 2244556677765544 45889999999999999999999987432110 0000000000000000
Q ss_pred cCCCcchH----HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH--HhccC
Q 005177 664 VGSSSSLQ----DEIKLVLDVALLCTRSTPSDRPSMEEALKL--LSGLK 706 (710)
Q Consensus 664 ~~~~~~~~----~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~--L~~~~ 706 (710)
........ .....+.+++.+|++.||++|||++|++++ ++++.
T Consensus 242 ~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~ 290 (298)
T d1gz8a_ 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290 (298)
T ss_dssp CCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred cccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCC
Confidence 00011111 122467889999999999999999999986 66654
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-43 Score=366.19 Aligned_cols=237 Identities=18% Similarity=0.173 Sum_probs=188.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHh-ccCCCCceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIG-TVRHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~-~l~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
..+.||+|+||.||+|+. .+|+.||||+++... ...+.+..|+.++. .++|||||++++++.+++..|+|||||
T Consensus 6 i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmEy~ 85 (320)
T d1xjda_ 6 LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYL 85 (320)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEEeec
Confidence 678999999999999985 689999999998542 12345556666655 689999999999999999999999999
Q ss_pred CCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--C
Q 005177 524 PNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--F 599 (710)
Q Consensus 524 ~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~ 599 (710)
++|+|.++++. ..+..+...++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++........ .
T Consensus 86 ~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~---~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~~~ 162 (320)
T d1xjda_ 86 NGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNT 162 (320)
T ss_dssp TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCC
T ss_pred CCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCcccceeecCCCceeccccchhhhcccccccccc
Confidence 99999999975 567888999999999999999999 9999999999999999999999999999865322211 1
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 679 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (710)
..++..+.+||+.....++.++||||+||++|||+||+.||.+..... ....+.... ...+.. ....+.+
T Consensus 163 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~------~~~~i~~~~-~~~p~~---~s~~~~d 232 (320)
T d1xjda_ 163 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE------LFHSIRMDN-PFYPRW---LEKEAKD 232 (320)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-CCCCTT---SCHHHHH
T ss_pred cCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHH------HHHHHHcCC-CCCCcc---CCHHHHH
Confidence 224566788899988899999999999999999999999997543211 111111111 111111 2245678
Q ss_pred HHhhcCCCCCCCCCCHH-HHH
Q 005177 680 VALLCTRSTPSDRPSME-EAL 699 (710)
Q Consensus 680 l~~~Cl~~~p~~RPs~~-evl 699 (710)
++.+|++.||++|||+. |++
T Consensus 233 li~~~L~~dP~~R~s~~~~l~ 253 (320)
T d1xjda_ 233 LLVKLFVREPEKRLGVRGDIR 253 (320)
T ss_dssp HHHHHSCSSGGGSBTTBSCGG
T ss_pred HHHHhcccCCCCCcCHHHHHH
Confidence 99999999999999985 664
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=7.7e-42 Score=352.44 Aligned_cols=248 Identities=18% Similarity=0.198 Sum_probs=187.1
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.||+|+||.||+|...+|+.||||+++.... ..+.+.+|+.++++++|||||++++++.+++..++||||+.++
T Consensus 6 ~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~~~~~ 85 (286)
T d1ob3a_ 6 GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQD 85 (286)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSEE
T ss_pred eccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEeehhh
Confidence 6788999999999999998999999999976432 2567899999999999999999999999999999999999987
Q ss_pred Chhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Cccc
Q 005177 527 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAK 602 (710)
Q Consensus 527 sL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~~ 602 (710)
.+..+... .++......|+.||++||+|||+. +|+||||||+|||++.++.+|++|||.+......... ...+
T Consensus 86 ~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~ 162 (286)
T d1ob3a_ 86 LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV 162 (286)
T ss_dssp HHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------C
T ss_pred hHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccC---cEEecCCCCceeeEcCCCCEEecccccceecccCccccceecc
Confidence 77766654 568999999999999999999998 9999999999999999999999999999765432211 1113
Q ss_pred ccccCchhhhh-ccCCccccceeeHHHHHHHHHhCCCCCCCCCCC---------------Ccccccccccccc---ccc-
Q 005177 603 IAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSL---------------QNKPIDGLLGEMY---NEN- 662 (710)
Q Consensus 603 ~~~~~~~e~~~-~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~---------------~~~~~~~~~~~~~---~~~- 662 (710)
.+.+.+||... ...++.++||||+||++|||++|+.||.+.... ..|.......+.. ...
T Consensus 163 ~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (286)
T d1ob3a_ 163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYE 242 (286)
T ss_dssp CCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCC
T ss_pred cchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhccccccccc
Confidence 33355666554 456789999999999999999999998643211 0111000000000 000
Q ss_pred ccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 663 EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 663 ~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
..............+.+++.+|++.||++|||++|+++
T Consensus 243 ~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~ 280 (286)
T d1ob3a_ 243 PLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (286)
T ss_dssp CCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00000001112346778999999999999999999975
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-42 Score=353.87 Aligned_cols=233 Identities=16% Similarity=0.133 Sum_probs=186.1
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-------hHHHHHHHHHHHhccC--CCCceeEEEEEEcCCceeEE
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-------RIKIVSEFITRIGTVR--HKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-------~~~~~~~e~~~l~~l~--H~niv~l~g~~~~~~~~~lv 519 (710)
..+.||+|+||.||+|+. .+|+.||||+++.... ..+.+.+|++++++++ |||||++++++.+++..++|
T Consensus 8 i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~~lv 87 (273)
T d1xwsa_ 8 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 87 (273)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEE
T ss_pred EeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeEEEE
Confidence 678999999999999985 6899999999975321 1234678999999887 89999999999999999999
Q ss_pred EeecCC-CChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC-CCceEEcccCcccccccc
Q 005177 520 YDYLPN-GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-NMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 520 ~Ey~~~-gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~-~~~~kl~DfGla~~~~~~ 595 (710)
|||+.+ +++.+++.. .+++.+...++.|+++||+|||+. +|+||||||+|||++. ++.+||+|||+|+.....
T Consensus 88 ~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~ 164 (273)
T d1xwsa_ 88 LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 164 (273)
T ss_dssp EECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECCSS
T ss_pred EEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCccccCcccceEEecCCCeEEECccccceecccc
Confidence 999986 578888754 678999999999999999999998 9999999999999995 479999999999875433
Q ss_pred CCCCcccccccCchhhhhccCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 596 DGSFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 596 ~~~~~~~~~~~~~~e~~~~~~~-~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
......++..|++||+.....+ +.++||||+||++|||+||+.||...... .... ...+... .
T Consensus 165 ~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~i------------~~~~-~~~~~~~---s 228 (273)
T d1xwsa_ 165 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI------------IRGQ-VFFRQRV---S 228 (273)
T ss_dssp CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH------------HHCC-CCCSSCC---C
T ss_pred cccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchHH------------hhcc-cCCCCCC---C
Confidence 2222335566888898876654 66789999999999999999998643211 0000 0001111 2
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.++.+++.+|++.||++|||++|++++
T Consensus 229 ~~~~~li~~~L~~dp~~R~s~~eil~h 255 (273)
T d1xwsa_ 229 SECQHLIRWCLALRPSDRPTFEEIQNH 255 (273)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence 456788999999999999999999874
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-41 Score=349.91 Aligned_cols=259 Identities=19% Similarity=0.243 Sum_probs=188.9
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CC-CcEEEEEEeeccch---hHHHHHHHHHHHhcc---CCCCceeEEEEEEc----
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PT-GITVSVKKIEWGAT---RIKIVSEFITRIGTV---RHKNLIRLLGFCYN---- 512 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~-g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l---~H~niv~l~g~~~~---- 512 (710)
+|. ..+.||+|+||.||+|.. .+ ++.||||+++.... ....+.+|+++++.+ +|||||+++++|..
T Consensus 8 ~Y~--i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~ 85 (305)
T d1blxa_ 8 QYE--CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 85 (305)
T ss_dssp TEE--EEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred CEE--EEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence 455 778999999999999985 44 67899999975322 233455677766554 89999999999863
Q ss_pred -CCceeEEEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCc
Q 005177 513 -RHQAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 588 (710)
Q Consensus 513 -~~~~~lv~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl 588 (710)
....++||||+++|++...... ..++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+
T Consensus 86 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~---~ivHrDiKp~NILi~~~~~~kl~dfg~ 162 (305)
T d1blxa_ 86 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL 162 (305)
T ss_dssp SEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred cCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecCCCccEEEEcCCCCeeecchhh
Confidence 3468999999998776544432 568888899999999999999998 999999999999999999999999999
Q ss_pred cccccccCC-CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCC---------------ccccc
Q 005177 589 KYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKPID 652 (710)
Q Consensus 589 a~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~---------------~~~~~ 652 (710)
++....... ....++..|.+||+.....++.++||||+||++|||+||+.||.+..... .|...
T Consensus 163 ~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 242 (305)
T d1blxa_ 163 ARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 242 (305)
T ss_dssp CCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTT
T ss_pred hhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhccccc
Confidence 876543221 22235566889999888899999999999999999999999987442110 01110
Q ss_pred cccc-cccccc-ccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH--HhccCCC
Q 005177 653 GLLG-EMYNEN-EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL--LSGLKPH 708 (710)
Q Consensus 653 ~~~~-~~~~~~-~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~--L~~~~~~ 708 (710)
.... ...... ..............+.+++.+|++.||++|||++|++++ +++++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i~~~ 302 (305)
T d1blxa_ 243 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERC 302 (305)
T ss_dssp CSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred ccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCchhh
Confidence 0000 000000 000000011123456789999999999999999999886 6666543
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.9e-41 Score=345.29 Aligned_cols=249 Identities=19% Similarity=0.193 Sum_probs=192.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|++++++++|||||+++++|.+.+..++||||+.+
T Consensus 6 ~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~~~~ 85 (292)
T d1unla_ 6 KLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ 85 (292)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSE
T ss_pred eeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEeeeccc
Confidence 778999999999999995 789999999997543 2367789999999999999999999999999999999999999
Q ss_pred CChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Ccc
Q 005177 526 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPA 601 (710)
Q Consensus 526 gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~ 601 (710)
+++..++.. ..++..+..++.|+++||+|||+. +|+||||||+|||++.++.+|++|||.++........ ...
T Consensus 86 ~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~---~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 162 (292)
T d1unla_ 86 DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEV 162 (292)
T ss_dssp EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCCSCC
T ss_pred cccccccccccccchhHHHHHHHHHHHHHHHhhcC---CEeeecccCcccccccCCceeeeecchhhcccCCCccceeec
Confidence 998887765 567888899999999999999998 9999999999999999999999999999876432221 222
Q ss_pred cccccCchhhhhccC-CccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc----------------ccccccccccc--
Q 005177 602 KIAWTESGEFYNAMK-EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI----------------DGLLGEMYNEN-- 662 (710)
Q Consensus 602 ~~~~~~~~e~~~~~~-~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~----------------~~~~~~~~~~~-- 662 (710)
+..++++||...... ++.++||||+||++|||++|+.|+..+.+...... .....+.....
T Consensus 163 ~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (292)
T d1unla_ 163 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMY 242 (292)
T ss_dssp SCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCC
T ss_pred cccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccc
Confidence 445577777766554 68899999999999999999999864433221100 00000000000
Q ss_pred --ccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 663 --EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 663 --~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..............+.+++.+|++.||++|||++|++++
T Consensus 243 ~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H 283 (292)
T d1unla_ 243 PATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000001111223467789999999999999999999864
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-40 Score=350.08 Aligned_cols=256 Identities=21% Similarity=0.273 Sum_probs=186.6
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCC-----
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----- 514 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----- 514 (710)
+.|. ..+.||+|+||+||+|.. .+|+.||||+++... ...+.+.+|+++|++++|||||+++++|...+
T Consensus 18 ~~Y~--~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~ 95 (346)
T d1cm8a_ 18 AVYR--DLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 95 (346)
T ss_dssp SSEE--EEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred CcEE--EEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCcccccc
Confidence 4455 778999999999999985 679999999997532 23567889999999999999999999998754
Q ss_pred -ceeEEEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccc
Q 005177 515 -QAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 592 (710)
Q Consensus 515 -~~~lv~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~ 592 (710)
..|+||||+ +++|.++.+. .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+|++|||+|+..
T Consensus 96 ~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~ 171 (346)
T d1cm8a_ 96 TDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQA 171 (346)
T ss_dssp CCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred ceEEEEEecc-cccHHHHHHhccccHHHHHHHHHHHHHHHHHHHhC---CCcccccCcchhhcccccccccccccceecc
Confidence 579999999 4678777754 689999999999999999999998 9999999999999999999999999999876
Q ss_pred cccCCCCcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc-------------cc----
Q 005177 593 QLADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-------------GL---- 654 (710)
Q Consensus 593 ~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~-------------~~---- 654 (710)
........ ++.+|.+||...+ ..++.++||||+||++|||++|+.|+.+.......... ..
T Consensus 172 ~~~~~~~~-~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (346)
T d1cm8a_ 172 DSEMTGYV-VTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDE 250 (346)
T ss_dssp CSSCCSSC-SCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHH
T ss_pred CCcccccc-ccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchh
Confidence 54333223 3445667776654 45788999999999999999999998754321100000 00
Q ss_pred ---cccccccc-ccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH--HhccC
Q 005177 655 ---LGEMYNEN-EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL--LSGLK 706 (710)
Q Consensus 655 ---~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~--L~~~~ 706 (710)
........ ..............+.+++.+|++.||++|||++|++++ ++.+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~ 308 (346)
T d1cm8a_ 251 AKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 308 (346)
T ss_dssp HHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred hhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence 00000000 000000011123456789999999999999999999986 55553
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.8e-40 Score=346.56 Aligned_cols=252 Identities=17% Similarity=0.184 Sum_probs=181.0
Q ss_pred chhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcC------CceeEEE
Q 005177 448 STECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR------HQAYLLY 520 (710)
Q Consensus 448 ~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~------~~~~lv~ 520 (710)
|...++||+|+||+||+|+. .+|+.||||++..... ...+|+++|++++|||||+++++|... ...++||
T Consensus 22 Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~---~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~ 98 (350)
T d1q5ka_ 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 98 (350)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS---SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEE
T ss_pred cEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch---HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEE
Confidence 33778999999999999996 6799999999986432 334799999999999999999998653 2478999
Q ss_pred eecCCCChhhhhh---c--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC-ceEEcccCccccccc
Q 005177 521 DYLPNGNLSEKIR---T--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM-EPHLAEFGFKYLTQL 594 (710)
Q Consensus 521 Ey~~~gsL~~~l~---~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~-~~kl~DfGla~~~~~ 594 (710)
|||++|.+....+ . .+++.+...++.|+++||+|||+. +|+||||||+|||++.++ .+||+|||+++....
T Consensus 99 Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~---~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~ 175 (350)
T d1q5ka_ 99 DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175 (350)
T ss_dssp ECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTTCCEEECCCTTCEECCT
T ss_pred eccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc---CCcccCCCcceEEEecCCCceeEecccchhhccC
Confidence 9998764333322 1 578999999999999999999998 999999999999999775 899999999986543
Q ss_pred cCCC--CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccc-------------ccccccccc
Q 005177 595 ADGS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP-------------IDGLLGEMY 659 (710)
Q Consensus 595 ~~~~--~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~-------------~~~~~~~~~ 659 (710)
.... ..++..|++++++.....++.++||||+||++|||++|+.||.......... .........
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~ 255 (350)
T d1q5ka_ 176 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 255 (350)
T ss_dssp TSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---
T ss_pred CcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchh
Confidence 2221 2223444444445555678999999999999999999999987433111000 000000000
Q ss_pred cccc--cCCC----cchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH--Hhcc
Q 005177 660 NENE--VGSS----SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL--LSGL 705 (710)
Q Consensus 660 ~~~~--~~~~----~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~--L~~~ 705 (710)
+... .... .........+.+++.+|++.||++|||++|++++ ++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~ 309 (350)
T d1q5ka_ 256 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309 (350)
T ss_dssp CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred hccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccc
Confidence 0000 0000 0001123457789999999999999999999874 4444
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-39 Score=345.13 Aligned_cols=249 Identities=18% Similarity=0.213 Sum_probs=183.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCC----ceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----QAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----~~~lv~Ey 522 (710)
..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++|++++|||||++++++.... ..++++||
T Consensus 12 ~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~~~ 91 (345)
T d1pmea_ 12 NLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTH 91 (345)
T ss_dssp EEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEE
T ss_pred EEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEEEEe
Confidence 778999999999999984 789999999997532 23567889999999999999999999997653 23455667
Q ss_pred cCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC----
Q 005177 523 LPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG---- 597 (710)
Q Consensus 523 ~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~---- 597 (710)
+.+|+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 92 ~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~---~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~~ 168 (345)
T d1pmea_ 92 LMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 168 (345)
T ss_dssp CCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCT
T ss_pred ecCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCcceEEECCCCCEEEcccCceeeccCCCcccee
Confidence 779999999864 788999999999999999999998 999999999999999999999999999976532211
Q ss_pred -CCcccccccCchhhh-hccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc-cc----------------cccc
Q 005177 598 -SFPAKIAWTESGEFY-NAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GL----------------LGEM 658 (710)
Q Consensus 598 -~~~~~~~~~~~~e~~-~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~-~~----------------~~~~ 658 (710)
....++..+.+||.. ....++.++||||+||++|||+||+.||............ .. ....
T Consensus 169 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (345)
T d1pmea_ 169 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 248 (345)
T ss_dssp TCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHH
T ss_pred eccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcc
Confidence 112234456677776 4456788999999999999999999998743321000000 00 0000
Q ss_pred ccccccCCCcchH----HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 659 YNENEVGSSSSLQ----DEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 659 ~~~~~~~~~~~~~----~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
....+......+. ....++.+++.+|++.||++|||++|++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h 295 (345)
T d1pmea_ 249 LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 295 (345)
T ss_dssp HHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0000000011111 112467899999999999999999999875
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-39 Score=339.50 Aligned_cols=253 Identities=19% Similarity=0.278 Sum_probs=184.4
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEc------
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYN------ 512 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~------ 512 (710)
..+|+ ..+.||+|+||+||+|+. .+|+.||||++..... ..+.+.+|+++|++++||||+++++++..
T Consensus 9 ~~rY~--i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~ 86 (318)
T d3blha1 9 VSKYE--KLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN 86 (318)
T ss_dssp GGGEE--EEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC------
T ss_pred cCCEE--EEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccc
Confidence 34566 778999999999999985 6899999999865422 35668899999999999999999999865
Q ss_pred --CCceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCc
Q 005177 513 --RHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 588 (710)
Q Consensus 513 --~~~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl 588 (710)
++..++||||++++.+...... .........|+.|+++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 87 ~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~---~ivHrDlKp~NILl~~~~~~kl~dfg~ 163 (318)
T d3blha1 87 RCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGL 163 (318)
T ss_dssp ----CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTT
T ss_pred ccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccC---CEEecCcCchheeecCCCcEEeeecce
Confidence 3468999999998776655443 456778889999999999999998 999999999999999999999999999
Q ss_pred cccccccCC------CCcccccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc-c--------
Q 005177 589 KYLTQLADG------SFPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-D-------- 652 (710)
Q Consensus 589 a~~~~~~~~------~~~~~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~-~-------- 652 (710)
++....... ....++.+|.+||..... .++.++||||+||++|||+||+.||.+......... .
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 243 (318)
T d3blha1 164 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 243 (318)
T ss_dssp CEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred eeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence 976532111 112245567788876544 678999999999999999999999864321110000 0
Q ss_pred cc--------ccccccccccCCCcchHHH------HHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 653 GL--------LGEMYNENEVGSSSSLQDE------IKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 653 ~~--------~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.. ........ ........+. ...+++++.+|++.||++|||++|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H 305 (318)
T d3blha1 244 EVWPNVDNYELYEKLELV-KGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 305 (318)
T ss_dssp TTSTTCCCC-------CC-SSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hhccccchhhhhhhhccc-ccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence 00 00000000 0011111111 2356789999999999999999999875
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-40 Score=343.22 Aligned_cols=246 Identities=15% Similarity=0.118 Sum_probs=185.8
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc----CCCcEEEEEEeeccc-----hhHHHHHHHHHHHhccCC-CCceeEEEEEEcC
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL----PTGITVSVKKIEWGA-----TRIKIVSEFITRIGTVRH-KNLIRLLGFCYNR 513 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~----~~g~~vAvK~l~~~~-----~~~~~~~~e~~~l~~l~H-~niv~l~g~~~~~ 513 (710)
++|+ ..+.||+|+||.||+|.. .+|+.||||.++... ...+.+.+|++++++++| ||||++++++.+.
T Consensus 24 ~~y~--~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~ 101 (322)
T d1vzoa_ 24 ENFE--LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE 101 (322)
T ss_dssp GGEE--EEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred hceE--EEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccC
Confidence 3466 778999999999999974 358999999986532 235668899999999987 7999999999999
Q ss_pred CceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 514 HQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 514 ~~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
+..++||||+.+|+|.+++.. .........++.|++.|++|+|+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 102 ~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~vkL~DFG~a~~ 178 (322)
T d1vzoa_ 102 TKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKE 178 (322)
T ss_dssp TEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred CceeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcC---CEEeccCCccceeecCCCCEEEeeccchhh
Confidence 999999999999999999865 456677888999999999999998 999999999999999999999999999986
Q ss_pred ccccCCC---CcccccccCchhhhhc--cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCC
Q 005177 592 TQLADGS---FPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS 666 (710)
Q Consensus 592 ~~~~~~~---~~~~~~~~~~~e~~~~--~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (710)
....... ...+...+.+||.... ..++.++||||+||++|||+||+.||.+...... ............
T Consensus 179 ~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~--~~~i~~~~~~~~---- 252 (322)
T d1vzoa_ 179 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS--QAEISRRILKSE---- 252 (322)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC--HHHHHHHHHHCC----
T ss_pred hcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcccCC----
Confidence 5322111 1112333445555433 2467899999999999999999999875432211 111111111111
Q ss_pred CcchHHHHHHHHHHHhhcCCCCCCCCCC-----HHHHHH
Q 005177 667 SSSLQDEIKLVLDVALLCTRSTPSDRPS-----MEEALK 700 (710)
Q Consensus 667 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPs-----~~evl~ 700 (710)
.+.+......+.+++.+|++.||++||| ++|+++
T Consensus 253 ~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~ 291 (322)
T d1vzoa_ 253 PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 291 (322)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred CCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence 1111123456778999999999999994 788876
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=1.1e-38 Score=335.49 Aligned_cols=249 Identities=14% Similarity=0.166 Sum_probs=187.5
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccC-CCCceeEEEEEEcC--CceeEEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR-HKNLIRLLGFCYNR--HQAYLLY 520 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~--~~~~lv~ 520 (710)
+|. ..+.||+|+||.||+|+. .+|+.||||+++... .+.+.+|+++|++++ |||||++++++... ...++||
T Consensus 36 ~y~--i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~ 111 (328)
T d3bqca1 36 DYQ--LVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK--KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 111 (328)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC--HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred CeE--EEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH--HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence 455 778999999999999985 789999999997543 466889999999996 99999999999754 5689999
Q ss_pred eecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC-ceEEcccCccccccccCC-C
Q 005177 521 DYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM-EPHLAEFGFKYLTQLADG-S 598 (710)
Q Consensus 521 Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~-~~kl~DfGla~~~~~~~~-~ 598 (710)
|||++|+|.+..+ .++......++.||+.||+|||+. +|+||||||+|||++.++ .+||+|||+|+....... .
T Consensus 112 e~~~~~~L~~~~~-~l~e~~i~~i~~qil~aL~~LH~~---gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~ 187 (328)
T d3bqca1 112 EHVNNTDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYN 187 (328)
T ss_dssp ECCCSCBGGGTTT-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCC
T ss_pred eecCCCcHHHHhc-CCCHHHHHHHHHHHHHHHHHHhhc---ccccccccccceEEcCCCCeeeecccccceeccCCCccc
Confidence 9999999988754 688888999999999999999999 999999999999999655 689999999987643222 1
Q ss_pred CcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc----------------------cccc
Q 005177 599 FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI----------------------DGLL 655 (710)
Q Consensus 599 ~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~----------------------~~~~ 655 (710)
...++.++.+||.... ..++.++||||+||+++||++|+.|+..+........ ....
T Consensus 188 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 267 (328)
T d3bqca1 188 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRF 267 (328)
T ss_dssp SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGG
T ss_pred ccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCccc
Confidence 2223444667776554 4578999999999999999999999875432110000 0000
Q ss_pred ccccccc------ccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 656 GEMYNEN------EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 656 ~~~~~~~------~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
....... .............++.+++.+|++.||++|||++|++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~H 319 (328)
T d3bqca1 268 NDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 319 (328)
T ss_dssp GGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred chhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0000000 000011112223567899999999999999999999873
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.4e-39 Score=339.62 Aligned_cols=252 Identities=19% Similarity=0.221 Sum_probs=186.3
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcC------
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR------ 513 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~------ 513 (710)
+.|. ..+.||+|+||+||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++...
T Consensus 17 ~~Y~--i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~ 94 (355)
T d2b1pa1 17 KRYQ--NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 94 (355)
T ss_dssp TTEE--EEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred CCeE--EEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccC
Confidence 4566 788999999999999985 679999999998642 3356788999999999999999999999643
Q ss_pred CceeEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccc
Q 005177 514 HQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 514 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~ 593 (710)
...|+|||||.+ ++.+.+....++.....++.|++.||+|||+. +|+||||||+|||++.++.+|++|||+++...
T Consensus 95 ~~~~iv~Ey~~~-~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~---giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~ 170 (355)
T d2b1pa1 95 QDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 170 (355)
T ss_dssp CEEEEEEECCSE-EHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred ceeEEEEeccch-HHHHhhhcCCCHHHHHHHHHHHHHHHHHhhhc---ccccccCCccccccccccceeeechhhhhccc
Confidence 578999999975 56666777889999999999999999999999 99999999999999999999999999987654
Q ss_pred ccCCC-CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc---------------cccc-cccc
Q 005177 594 LADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPID-GLLG 656 (710)
Q Consensus 594 ~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~---------------~~~~-~~~~ 656 (710)
..... ...++..+.+||...+..++.++||||+||+++||++|+.||.+...... |... ....
T Consensus 171 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 250 (355)
T d2b1pa1 171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 250 (355)
T ss_dssp ----------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHH
T ss_pred cccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHH
Confidence 32221 11244557788988888899999999999999999999999864321100 0000 0000
Q ss_pred ---------------ccccccccC-CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 657 ---------------EMYNENEVG-SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 657 ---------------~~~~~~~~~-~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
......... ...........+.+++.+|++.||++|||++|++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H 311 (355)
T d2b1pa1 251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311 (355)
T ss_dssp HHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 000000000 011123345678899999999999999999999864
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-39 Score=341.64 Aligned_cols=252 Identities=20% Similarity=0.232 Sum_probs=184.9
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcC-----C
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR-----H 514 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-----~ 514 (710)
+.|. ..+.||+|+||+||+|.. .+|+.||||+++... ...+.+.+|+++|++++|||||++++++... .
T Consensus 18 ~rY~--i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~ 95 (348)
T d2gfsa1 18 ERYQ--NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 95 (348)
T ss_dssp TTEE--EEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTC
T ss_pred CCeE--EEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccC
Confidence 4455 788999999999999984 789999999997542 2356788999999999999999999998643 3
Q ss_pred ceeEEEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccc
Q 005177 515 QAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 515 ~~~lv~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~ 593 (710)
..+++|||+.+|+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+|++|||++....
T Consensus 96 ~~~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~---giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~ 172 (348)
T d2gfsa1 96 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 172 (348)
T ss_dssp CCCEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC----CCT
T ss_pred ceEEEEEeecCCchhhhcccccccHHHHHHHHHHHHHHHHHHHhC---CCcccccCCccccccccccccccccchhcccC
Confidence 45777888899999999965 678999999999999999999998 99999999999999999999999999987665
Q ss_pred ccCCCCcccccccCchhhh-hccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc-ccc----------------c
Q 005177 594 LADGSFPAKIAWTESGEFY-NAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-DGL----------------L 655 (710)
Q Consensus 594 ~~~~~~~~~~~~~~~~e~~-~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~-~~~----------------~ 655 (710)
.......++.. +.+||.. ....++.++||||+||++|||++|+.||.+......... ... .
T Consensus 173 ~~~~~~~g~~~-y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 251 (348)
T d2gfsa1 173 DEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 251 (348)
T ss_dssp GGGSSSCHHHH-TSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHH
T ss_pred ccccccccccc-ccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhh
Confidence 43333333334 5566654 444568899999999999999999999874332110000 000 0
Q ss_pred cccccccccCCCcch----HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 656 GEMYNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 656 ~~~~~~~~~~~~~~~----~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
............... ......+.+++.+|++.||++|||++|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~H 301 (348)
T d2gfsa1 252 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 301 (348)
T ss_dssp HHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcC
Confidence 000000000000001 1123457789999999999999999999874
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.1e-38 Score=330.97 Aligned_cols=248 Identities=10% Similarity=-0.002 Sum_probs=183.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEE-EEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLL-GFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~-g~~~~~~~~~lv~Ey~~~gs 527 (710)
..+.||+|+||.||+|.. .+|+.||||.+.... ..+.+..|++++++++|+|+|..+ ++..+.+..++||||+. |+
T Consensus 11 l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~~-~~ 88 (299)
T d1ckia_ 11 LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLG-PS 88 (299)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT-TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECCC-CB
T ss_pred EeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc-cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEcC-Cc
Confidence 678899999999999985 779999999987643 334577899999999988766655 45566778899999995 56
Q ss_pred hhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC---CCceEEcccCccccccccCC----
Q 005177 528 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLAEFGFKYLTQLADG---- 597 (710)
Q Consensus 528 L~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~---~~~~kl~DfGla~~~~~~~~---- 597 (710)
+.+.+.. ..++.....++.|+++||+|||+. +|+||||||+|||++. +..+|++|||+|+.......
T Consensus 89 l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~ 165 (299)
T d1ckia_ 89 LEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHI 165 (299)
T ss_dssp HHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBC
T ss_pred hhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHhhccccccCCCceeeeeccCcceeccccccccce
Confidence 6666542 578999999999999999999998 9999999999999763 55799999999987643221
Q ss_pred -----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCc-chH
Q 005177 598 -----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS-SLQ 671 (710)
Q Consensus 598 -----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 671 (710)
....++..|++||...+..++.++|||||||++|||+||+.||............ ............+ ...
T Consensus 166 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 242 (299)
T d1ckia_ 166 PYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKY---ERISEKKMSTPIEVLCK 242 (299)
T ss_dssp CCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------H---HHHHHHHHHSCHHHHTT
T ss_pred eccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHH---HHhhcccCCCChhHhcc
Confidence 1112455678889988888999999999999999999999998743322111100 0000000000000 001
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 672 DEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 672 ~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
....++.+++.+|++.+|++||+++++.+.|+.+
T Consensus 243 ~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~ 276 (299)
T d1ckia_ 243 GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 276 (299)
T ss_dssp TSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence 1224577888999999999999999988887654
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=2.1e-38 Score=327.14 Aligned_cols=249 Identities=10% Similarity=0.009 Sum_probs=189.4
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCC-CCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRH-KNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H-~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
..+.||+|+||.||+|+. .+|+.||||.+.... ....+.+|+++++.++| +|++.+++++.++...++||||+ +|+
T Consensus 9 i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~-~~~ 86 (293)
T d1csna_ 9 VGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPS 86 (293)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc-CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec-CCC
Confidence 678899999999999985 679999999987543 33456778888888876 89999999999999999999999 689
Q ss_pred hhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC-----CCceEEcccCccccccccCC--
Q 005177 528 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-----NMEPHLAEFGFKYLTQLADG-- 597 (710)
Q Consensus 528 L~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~-----~~~~kl~DfGla~~~~~~~~-- 597 (710)
|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+|+.......
T Consensus 87 l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~---giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~ 163 (293)
T d1csna_ 87 LEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQ 163 (293)
T ss_dssp HHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCC
T ss_pred HHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHC---CceeccCCccceeecCcccccCCceEEcccceeEEcccCcccc
Confidence 9998864 568889999999999999999999 9999999999999974 56899999999987542211
Q ss_pred -------CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcch
Q 005177 598 -------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 670 (710)
Q Consensus 598 -------~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (710)
....+++.|++||......++.++|||||||++|||+||+.||.+..............+.....+. ....
T Consensus 164 ~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~--~~l~ 241 (293)
T d1csna_ 164 HIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL--RELC 241 (293)
T ss_dssp BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH--HHHT
T ss_pred ceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCCh--HHhc
Confidence 1112456688899988888999999999999999999999999744322111100000000000000 0000
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 671 QDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 671 ~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
....+++.+++..|++.+|++||+++.+.+.|+++
T Consensus 242 ~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~ 276 (293)
T d1csna_ 242 AGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV 276 (293)
T ss_dssp TTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 01123566788889999999999999888877654
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=8.8e-34 Score=302.08 Aligned_cols=249 Identities=15% Similarity=0.112 Sum_probs=181.3
Q ss_pred hhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccC-----------CCCceeEEEEEEcC--C
Q 005177 449 TECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR-----------HKNLIRLLGFCYNR--H 514 (710)
Q Consensus 449 ~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~-----------H~niv~l~g~~~~~--~ 514 (710)
...+.||+|+||+||+|+. .+|+.||||+++......+.+.+|++++++++ |+|||++++++... .
T Consensus 16 ~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~~ 95 (362)
T d1q8ya_ 16 ILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPN 95 (362)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETT
T ss_pred EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeecccc
Confidence 3789999999999999985 78999999999876655677888898887765 57899999988653 4
Q ss_pred ceeEEEeecCCCChhhhhh-----cCCCHHHHHHHHHHHHHHHHHHhc-CCCCCceecCCCCCCeEecCCC------ceE
Q 005177 515 QAYLLYDYLPNGNLSEKIR-----TKRDWAAKYKIVLGVARGLCFLHH-DCYPAIPHGDLKASNIVFDENM------EPH 582 (710)
Q Consensus 515 ~~~lv~Ey~~~gsL~~~l~-----~~~~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlk~~NiLl~~~~------~~k 582 (710)
..++||+++..+....... ....+.....++.|+++||+|||+ . +|+||||||+|||++.++ .+|
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~---~IvHrDlKp~NIll~~~~~~~~~~~~k 172 (362)
T d1q8ya_ 96 GVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC---GIIHTDIKPENVLMEIVDSPENLIQIK 172 (362)
T ss_dssp EEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT---CEECSCCSGGGEEEEEEETTTTEEEEE
T ss_pred ceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhc---CcccccCChhHeeeeccCcccccceee
Confidence 6677888776654333221 245778889999999999999998 5 899999999999998665 389
Q ss_pred EcccCccccccccCCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc-------ccc
Q 005177 583 LAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-------GLL 655 (710)
Q Consensus 583 l~DfGla~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~-------~~~ 655 (710)
++|||.++....... ...++.++.+||......++.++||||+||+++||++|+.||............ ..+
T Consensus 173 l~dfg~s~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~l 251 (362)
T d1q8ya_ 173 IADLGNACWYDEHYT-NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELL 251 (362)
T ss_dssp ECCCTTCEETTBCCC-SCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHH
T ss_pred Eeecccccccccccc-cccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHh
Confidence 999999876543322 223455577888888888999999999999999999999998733211000000 000
Q ss_pred --------------cccccc-----c--ccC----------CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 656 --------------GEMYNE-----N--EVG----------SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 656 --------------~~~~~~-----~--~~~----------~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
....+. . ... ...........+.+++.+|++.||++|||++|++++
T Consensus 252 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~H 328 (362)
T d1q8ya_ 252 GELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 328 (362)
T ss_dssp CSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred CCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 000000 0 000 011123456788999999999999999999999875
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=6.7e-34 Score=296.67 Aligned_cols=255 Identities=29% Similarity=0.405 Sum_probs=218.9
Q ss_pred CCCcEEECCCCcCcc--cCCccccCCCCCcEEECcC-CCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCE
Q 005177 101 NELVDLNLSHNSFSG--QFPVEIFNLTSLISLDISR-NNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKV 177 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~ 177 (710)
.+++.|||++|.++| .+|.+++++++|++|+|++ |+++|.+|..|++|++|++|+|++|++.+..|..+..+.+|++
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 129 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred EEEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcc
Confidence 368899999999987 4788899999999999986 7888888888888888888888888888888888888888888
Q ss_pred EEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCcc-chhcccccc
Q 005177 178 LNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEV-QYLDIAGAN 256 (710)
Q Consensus 178 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L-~~L~ls~n~ 256 (710)
+++++|.+.+.+|..++++++|+.+++++|.+.+.+|..++. +.++ +.++++.|+
T Consensus 130 l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~------------------------l~~l~~~l~~~~n~ 185 (313)
T d1ogqa_ 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGS------------------------FSKLFTSMTISRNR 185 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGC------------------------CCTTCCEEECCSSE
T ss_pred cccccccccccCchhhccCcccceeecccccccccccccccc------------------------cccccccccccccc
Confidence 888888888888888888888888888887777666655443 3333 667888889
Q ss_pred CCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcc
Q 005177 257 LSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPES 336 (710)
Q Consensus 257 l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 336 (710)
+++..|..+.++..+ .++++.+.+.+.+|..+..+++++.+++++|.+.+.+| .++.+++|+.|+|++|+++|.+|.+
T Consensus 186 l~~~~~~~~~~l~~~-~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~ 263 (313)
T d1ogqa_ 186 LTGKIPPTFANLNLA-FVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQG 263 (313)
T ss_dssp EEEECCGGGGGCCCS-EEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGG
T ss_pred ccccccccccccccc-cccccccccccccccccccccccccccccccccccccc-ccccccccccccCccCeecccCChH
Confidence 998899888887654 79999999999999999999999999999999998766 6888999999999999999999999
Q ss_pred cCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCc-CCcc-Cc
Q 005177 337 LVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNN-FNGS-IP 382 (710)
Q Consensus 337 ~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~-l~g~-ip 382 (710)
++.+++|++|+|++|+|+|.+|+ ++++++|+.+++++|+ +.|. +|
T Consensus 264 l~~L~~L~~L~Ls~N~l~g~iP~-~~~L~~L~~l~l~~N~~l~g~plp 310 (313)
T d1ogqa_ 264 LTQLKFLHSLNVSFNNLCGEIPQ-GGNLQRFDVSAYANNKCLCGSPLP 310 (313)
T ss_dssp GGGCTTCCEEECCSSEEEEECCC-STTGGGSCGGGTCSSSEEESTTSS
T ss_pred HhCCCCCCEEECcCCcccccCCC-cccCCCCCHHHhCCCccccCCCCC
Confidence 99999999999999999999995 6788999999999997 5654 44
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.95 E-value=2.2e-26 Score=245.89 Aligned_cols=298 Identities=27% Similarity=0.415 Sum_probs=215.1
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEE
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 155 (710)
.++.++++++++.. +. .+.. +++|++|||++|++++. | .+.++++|++|++++|.+.+..| ++++++|+.|+
T Consensus 45 ~l~~L~l~~~~I~~-l~-gl~~--L~nL~~L~Ls~N~l~~l-~-~l~~L~~L~~L~L~~n~i~~i~~--l~~l~~L~~L~ 116 (384)
T d2omza2 45 QVTTLQADRLGIKS-ID-GVEY--LNNLTQINFSNNQLTDI-T-PLKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 116 (384)
T ss_dssp TCCEEECCSSCCCC-CT-TGGG--CTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred CCCEEECCCCCCCC-cc-cccc--CCCCCEEeCcCCcCCCC-c-cccCCcccccccccccccccccc--ccccccccccc
Confidence 46677777776653 22 2333 67777888888777753 3 27777778888887777775432 67777777887
Q ss_pred CCCCCCCcCCchhccCCCCCCEEEccCCCCC-----------------------------------------CCCCcccC
Q 005177 156 AFSNSFSGSVPAEISQLEHLKVLNLAGSYFS-----------------------------------------GPIPSQFG 194 (710)
Q Consensus 156 L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~-----------------------------------------~~~p~~~~ 194 (710)
+++|.+++..+ ......+..+....|.+. ...+..+.
T Consensus 117 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (384)
T d2omza2 117 LFNNQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLA 194 (384)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGG
T ss_pred ccccccccccc--ccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccccccccc
Confidence 77777764322 222233333333222211 11223456
Q ss_pred CCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEE
Q 005177 195 SFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESL 274 (710)
Q Consensus 195 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L 274 (710)
.+++++.|++++|.+++..| ....++|+.|++++|.++. + ..+..+++|+.|++++|.+++..+ +..+++|+.|
T Consensus 195 ~l~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L 268 (384)
T d2omza2 195 KLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTEL 268 (384)
T ss_dssp GCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEE
T ss_pred cccccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCC-c-chhhcccccchhccccCccCCCCc--ccccccCCEe
Confidence 67888889999888886544 4567788889998888764 3 357788889999999998886543 7778899999
Q ss_pred EccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCC
Q 005177 275 FLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFS 354 (710)
Q Consensus 275 ~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 354 (710)
++++|.+++..+ +..+..++.++++.|.+++. ..+..+++++.|++++|++++.. .+..+++|++|++++|+++
T Consensus 269 ~l~~~~l~~~~~--~~~~~~l~~l~~~~n~l~~~--~~~~~~~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~n~l~ 342 (384)
T d2omza2 269 KLGANQISNISP--LAGLTALTNLELNENQLEDI--SPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRLFFANNKVS 342 (384)
T ss_dssp ECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCC--GGGGGCTTCSEEECCSSCCSCCG--GGGGCTTCCEEECCSSCCC
T ss_pred eccCcccCCCCc--cccccccccccccccccccc--cccchhcccCeEECCCCCCCCCc--ccccCCCCCEEECCCCCCC
Confidence 999998876443 66788889999999988863 35788889999999999998653 3778899999999999988
Q ss_pred CCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecccC
Q 005177 355 GSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSN 399 (710)
Q Consensus 355 g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N 399 (710)
+ +| .+..+++|++|++++|++++..| +..+++|+.|++++|
T Consensus 343 ~-l~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 343 D-VS-SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp C-CG-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTCSEEECCCE
T ss_pred C-Ch-hHcCCCCCCEEECCCCcCCCChh--hccCCCCCEeeCCCC
Confidence 4 44 58889999999999999987544 788889999999887
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.94 E-value=1.7e-25 Score=231.63 Aligned_cols=279 Identities=23% Similarity=0.301 Sum_probs=200.7
Q ss_pred CCceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCC
Q 005177 61 YACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGH 140 (710)
Q Consensus 61 ~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 140 (710)
.-|.|.+|.|++. +++ .+|+.+ .+.+++|+|++|+++...+..|.++++|++|++++|.+...
T Consensus 8 c~c~~~~~~C~~~------------~L~-~lP~~l----~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i 70 (305)
T d1xkua_ 8 CQCHLRVVQCSDL------------GLE-KVPKDL----PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKI 70 (305)
T ss_dssp CEEETTEEECTTS------------CCC-SCCCSC----CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCB
T ss_pred CEecCCEEEecCC------------CCC-ccCCCC----CCCCCEEECcCCcCCCcChhHhhcccccccccccccccccc
Confidence 3478999999751 222 344443 34688888888888755555788888888888888888877
Q ss_pred CChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccccc
Q 005177 141 FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGML 220 (710)
Q Consensus 141 ~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 220 (710)
.|..|.++++|++|++++|+++. +|..+ ...|+.|+++.|.+.+..+..+.....++.++...|....
T Consensus 71 ~~~~f~~l~~L~~L~l~~n~l~~-l~~~~--~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~--------- 138 (305)
T d1xkua_ 71 SPGAFAPLVKLERLYLSKNQLKE-LPEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKS--------- 138 (305)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSB-CCSSC--CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCG---------
T ss_pred chhhhhCCCccCEecccCCccCc-Cccch--hhhhhhhhccccchhhhhhhhhhccccccccccccccccc---------
Confidence 78888888888888888888873 55433 3567788888888876655566666777777766664321
Q ss_pred ccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEc
Q 005177 221 KTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDL 300 (710)
Q Consensus 221 ~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 300 (710)
....+..+..+++|+++++++|+++ .+|..+ +++|+.|++++|...+..+..+..++.++.|++
T Consensus 139 -------------~~~~~~~~~~l~~L~~l~l~~n~l~-~l~~~~--~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~ 202 (305)
T d1xkua_ 139 -------------SGIENGAFQGMKKLSYIRIADTNIT-TIPQGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLGL 202 (305)
T ss_dssp -------------GGBCTTGGGGCTTCCEEECCSSCCC-SCCSSC--CTTCSEEECTTSCCCEECTGGGTTCTTCCEEEC
T ss_pred -------------cCCCccccccccccCccccccCCcc-ccCccc--CCccCEEECCCCcCCCCChhHhhcccccccccc
Confidence 1122334455666777777777766 344332 567888888888888888888888888888888
Q ss_pred cCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCc------ccCCCCCCcEEECCC
Q 005177 301 SDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPE------NLGRNSKLRWVDVST 374 (710)
Q Consensus 301 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~------~l~~~~~L~~L~ls~ 374 (710)
++|.+.+..+.++.++++|++|+|++|+++ .+|..+..+++|++|+|++|+++..-.. ......+|+.|++++
T Consensus 203 s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~ 281 (305)
T d1xkua_ 203 SFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFS 281 (305)
T ss_dssp CSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCS
T ss_pred ccccccccccccccccccceeeeccccccc-ccccccccccCCCEEECCCCccCccChhhccCcchhcccCCCCEEECCC
Confidence 888888777888888888888888888887 5677888888888888888888743222 234567889999999
Q ss_pred CcCC-ccCcccc
Q 005177 375 NNFN-GSIPPDI 385 (710)
Q Consensus 375 N~l~-g~ip~~~ 385 (710)
|.+. ..+++..
T Consensus 282 N~~~~~~~~~~~ 293 (305)
T d1xkua_ 282 NPVQYWEIQPST 293 (305)
T ss_dssp SSSCGGGSCGGG
T ss_pred CcCccCcCCHhH
Confidence 9885 4555543
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.94 E-value=4.2e-25 Score=228.58 Aligned_cols=266 Identities=22% Similarity=0.311 Sum_probs=215.6
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEcc
Q 005177 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (710)
Q Consensus 102 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~ 181 (710)
..+.+|-++++++ .+|..+. +++++|+|++|+++...+..|.++++|++|++++|.++...|..|.++++|++|+++
T Consensus 11 ~~~~~~C~~~~L~-~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~ 87 (305)
T d1xkua_ 11 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 87 (305)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred cCCEEEecCCCCC-ccCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEeccc
Confidence 3567888888887 6787764 689999999999997666789999999999999999998778889999999999999
Q ss_pred CCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccC--Cc
Q 005177 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANL--SG 259 (710)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l--~g 259 (710)
+|+++. +|..+ ...++.|++.+|.+.+..+..+.. ...+..++...|.. .+
T Consensus 88 ~n~l~~-l~~~~--~~~l~~L~~~~n~l~~l~~~~~~~------------------------~~~~~~l~~~~n~~~~~~ 140 (305)
T d1xkua_ 88 KNQLKE-LPEKM--PKTLQELRVHENEITKVRKSVFNG------------------------LNQMIVVELGTNPLKSSG 140 (305)
T ss_dssp SSCCSB-CCSSC--CTTCCEEECCSSCCCBBCHHHHTT------------------------CTTCCEEECCSSCCCGGG
T ss_pred CCccCc-Cccch--hhhhhhhhccccchhhhhhhhhhc------------------------cccccccccccccccccC
Confidence 999984 56543 457888888888876543333322 23334444444432 23
Q ss_pred cCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCC
Q 005177 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (710)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 339 (710)
..+..+..+++|+.+++++|.++. +|..+ .++|+.|++++|...+..+..|..++.++.|++++|.+++..+.++..
T Consensus 141 ~~~~~~~~l~~L~~l~l~~n~l~~-l~~~~--~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~ 217 (305)
T d1xkua_ 141 IENGAFQGMKKLSYIRIADTNITT-IPQGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLAN 217 (305)
T ss_dssp BCTTGGGGCTTCCEEECCSSCCCS-CCSSC--CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGG
T ss_pred CCccccccccccCccccccCCccc-cCccc--CCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccc
Confidence 445667888999999999999874 55443 578999999999999999999999999999999999999988999999
Q ss_pred CCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcc-cc------cCCCceeeEecccCCcc
Q 005177 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPP-DI------CSGGVLFKLILFSNNFT 402 (710)
Q Consensus 340 l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~-~~------~~~~~L~~l~l~~N~l~ 402 (710)
+++|++|+|++|.++ .+|.++..+++|++|++++|+|+. ++. .+ .....|+.|++++|.+.
T Consensus 218 l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~~-i~~~~f~~~~~~~~~~~L~~L~L~~N~~~ 285 (305)
T d1xkua_ 218 TPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISA-IGSNDFCPPGYNTKKASYSGVSLFSNPVQ 285 (305)
T ss_dssp STTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCC-CCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred cccceeeeccccccc-ccccccccccCCCEEECCCCccCc-cChhhccCcchhcccCCCCEEECCCCcCc
Confidence 999999999999998 678899999999999999999984 443 22 34577999999999885
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.93 E-value=3.8e-25 Score=236.06 Aligned_cols=276 Identities=27% Similarity=0.329 Sum_probs=223.2
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEE
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 155 (710)
....++++++.+++. + .+.. +++|++|++++|.+.+.. .++++++|+.|++++|.+++..+. .....+..+.
T Consensus 67 nL~~L~Ls~N~l~~l-~-~l~~--L~~L~~L~L~~n~i~~i~--~l~~l~~L~~L~~~~~~~~~~~~~--~~~~~~~~~~ 138 (384)
T d2omza2 67 NLTQINFSNNQLTDI-T-PLKN--LTKLVDILMNNNQIADIT--PLANLTNLTGLTLFNNQITDIDPL--KNLTNLNRLE 138 (384)
T ss_dssp TCCEEECCSSCCCCC-G-GGTT--CTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCCCGGG--TTCTTCSEEE
T ss_pred CCCEEeCcCCcCCCC-c-cccC--Cccccccccccccccccc--cccccccccccccccccccccccc--cccccccccc
Confidence 478899999998864 3 2666 899999999999998643 388999999999999998864432 2233333333
Q ss_pred CCCCCCC-----------------------------------------cCCchhccCCCCCCEEEccCCCCCCCCCcccC
Q 005177 156 AFSNSFS-----------------------------------------GSVPAEISQLEHLKVLNLAGSYFSGPIPSQFG 194 (710)
Q Consensus 156 L~~N~l~-----------------------------------------~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~ 194 (710)
...|.+. ...+..+..+++++.+++++|.+++..| +.
T Consensus 139 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~l~~n~i~~~~~--~~ 216 (384)
T d2omza2 139 LSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITP--LG 216 (384)
T ss_dssp EEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGG--GG
T ss_pred cccccccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccceeeccCCccCCCCc--cc
Confidence 3222211 1233556788999999999999997654 56
Q ss_pred CCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEE
Q 005177 195 SFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESL 274 (710)
Q Consensus 195 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L 274 (710)
..++|+.|++++|.++. + +.+..+++|+.|++++|.+++..+ ++.+++|+.|++++|++++.. .+..++.++.+
T Consensus 217 ~~~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~~~l~~~~--~~~~~~~l~~l 290 (384)
T d2omza2 217 ILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNIS--PLAGLTALTNL 290 (384)
T ss_dssp GCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCG--GGTTCTTCSEE
T ss_pred ccCCCCEEECCCCCCCC-c-chhhcccccchhccccCccCCCCc--ccccccCCEeeccCcccCCCC--ccccccccccc
Confidence 67899999999999875 3 468889999999999999986543 778999999999999998654 37788999999
Q ss_pred EccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCC
Q 005177 275 FLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFS 354 (710)
Q Consensus 275 ~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 354 (710)
+++.|.+++. ..+..+++++.|++++|++++.. .+..+++|+.|++++|++++ ++ .+..+++|++|++++|+++
T Consensus 291 ~~~~n~l~~~--~~~~~~~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~n~l~~-l~-~l~~l~~L~~L~l~~N~l~ 364 (384)
T d2omza2 291 ELNENQLEDI--SPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRLFFANNKVSD-VS-SLANLTNINWLSAGHNQIS 364 (384)
T ss_dssp ECCSSCCSCC--GGGGGCTTCSEEECCSSCCSCCG--GGGGCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECCSSCCC
T ss_pred cccccccccc--cccchhcccCeEECCCCCCCCCc--ccccCCCCCEEECCCCCCCC-Ch-hHcCCCCCCEEECCCCcCC
Confidence 9999999863 35788999999999999999754 38899999999999999985 44 6899999999999999999
Q ss_pred CCCCcccCCCCCCcEEECCCC
Q 005177 355 GSLPENLGRNSKLRWVDVSTN 375 (710)
Q Consensus 355 g~~p~~l~~~~~L~~L~ls~N 375 (710)
+..| +.++++|+.|++++|
T Consensus 365 ~l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 365 DLTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp BCGG--GTTCTTCSEEECCCE
T ss_pred CChh--hccCCCCCEeeCCCC
Confidence 7654 889999999999988
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=1.8e-25 Score=228.90 Aligned_cols=206 Identities=23% Similarity=0.244 Sum_probs=129.1
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECC-CCCCCcCCchhccCCCCCCEEE
Q 005177 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAF-SNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~-~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
+.+++|+|++|+|+...+..|.++++|++|++++|++.+..+..+.++..++.++.. .|.++...|..|.++++|++|+
T Consensus 32 ~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~ 111 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (284)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEe
Confidence 457888888888875555667788888888888888887777777777777777654 4455555566777777777777
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCc
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g 259 (710)
+++|.+....+..+..+++|+.+++++|.+++..+..+ ..+++|+.|++++|++++
T Consensus 112 l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f------------------------~~~~~L~~L~l~~N~l~~ 167 (284)
T d1ozna_ 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTF------------------------RDLGNLTHLFLHGNRISS 167 (284)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT------------------------TTCTTCCEEECCSSCCCE
T ss_pred cCCcccccccccccchhcccchhhhccccccccChhHh------------------------ccccchhhcccccCcccc
Confidence 77777766666666667777777777776654333332 233444444455555544
Q ss_pred cCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCc
Q 005177 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS 330 (710)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 330 (710)
..+..|.++++|+.+++++|++++..|..|..+++|++|++++|++.+..|..|..+++|++|++++|.+.
T Consensus 168 l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~ 238 (284)
T d1ozna_ 168 VPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (284)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred cchhhhccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCC
Confidence 44444555555555555555555555555555555555555555555555555555555555555555544
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=4.7e-25 Score=225.78 Aligned_cols=204 Identities=20% Similarity=0.159 Sum_probs=154.8
Q ss_pred EEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECc-CCCCCCCCChhhcCCCCCCEEE
Q 005177 77 VVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDIS-RNNFSGHFPGGIQSLRNLLVLD 155 (710)
Q Consensus 77 v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls-~N~l~~~~p~~l~~L~~L~~L~ 155 (710)
++.++++++.++..-+..+.. ++.|++||+++|.+....+..+.+++.++.++.+ .|.++...|..|.++++|++|+
T Consensus 34 ~~~L~Ls~N~i~~i~~~~f~~--l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~ 111 (284)
T d1ozna_ 34 SQRIFLHGNRISHVPAASFRA--CRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (284)
T ss_dssp CSEEECTTSCCCEECTTTTTT--CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCEEECcCCcCCCCCHHHhhc--cccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEe
Confidence 578999999998544445666 8999999999999998888888899999999875 5667777788999999999999
Q ss_pred CCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccc
Q 005177 156 AFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG 235 (710)
Q Consensus 156 L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g 235 (710)
+++|.+....+..+..+++|+.+++++|++++..+..|..+++|+.|++++|++++..|..+..+++|+.+++++|.+++
T Consensus 112 l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~ 191 (284)
T d1ozna_ 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191 (284)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred cCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhhhccccc
Confidence 99999988778889999999999999999998778889999999999999999987666666666655555555555555
Q ss_pred cCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccC
Q 005177 236 NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLA 282 (710)
Q Consensus 236 ~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~ 282 (710)
..|..+.++++|++|++++|++.+..|..|+++++|++|++++|.+.
T Consensus 192 i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~ 238 (284)
T d1ozna_ 192 VHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (284)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred cChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCC
Confidence 44555555555555555555554444444444444444444444443
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=2.1e-22 Score=203.65 Aligned_cols=79 Identities=14% Similarity=0.173 Sum_probs=34.4
Q ss_pred CcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccC
Q 005177 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182 (710)
Q Consensus 103 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~ 182 (710)
+...|.++++++ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|+++. +| .++.+++|++|+|++
T Consensus 12 ~~~v~C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~Ls~ 86 (266)
T d1p9ag_ 12 HLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQ-VDGTLPVLGTLDLSH 86 (266)
T ss_dssp CCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EE-CCSCCTTCCEEECCS
T ss_pred CeEEEccCCCCC-eeCcCcC--cCCCEEECcCCcCCCcCHHHhhccccccccccccccccc-cc-ccccccccccccccc
Confidence 334455555554 2443332 344445555554444333444444444444444444442 22 123444444444444
Q ss_pred CCCC
Q 005177 183 SYFS 186 (710)
Q Consensus 183 n~l~ 186 (710)
|+++
T Consensus 87 N~l~ 90 (266)
T d1p9ag_ 87 NQLQ 90 (266)
T ss_dssp SCCS
T ss_pred cccc
Confidence 4443
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=2.5e-22 Score=203.19 Aligned_cols=193 Identities=24% Similarity=0.255 Sum_probs=132.7
Q ss_pred EEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCC
Q 005177 80 INLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159 (710)
Q Consensus 80 l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N 159 (710)
++.++++++ .+|+.+. +.+++|+|++|.|++..+..|.++++|++|+|++|+|+. +| .++.+++|++|+|++|
T Consensus 15 v~C~~~~L~-~iP~~lp----~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~Ls~N 87 (266)
T d1p9ag_ 15 VNCDKRNLT-ALPPDLP----KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQ-VDGTLPVLGTLDLSHN 87 (266)
T ss_dssp EECTTSCCS-SCCSCCC----TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EE-CCSCCTTCCEEECCSS
T ss_pred EEccCCCCC-eeCcCcC----cCCCEEECcCCcCCCcCHHHhhccccccccccccccccc-cc-cccccccccccccccc
Confidence 466667776 4666542 478999999999987666788999999999999999984 44 3578999999999999
Q ss_pred CCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCc
Q 005177 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPW 239 (710)
Q Consensus 160 ~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~ 239 (710)
++++ +|..+.++++|++|++++|.+.+..+..+..+.+++.|++++|.+....+..+.
T Consensus 88 ~l~~-~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~--------------------- 145 (266)
T d1p9ag_ 88 QLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLT--------------------- 145 (266)
T ss_dssp CCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTT---------------------
T ss_pred cccc-cccccccccccccccccccccceeeccccccccccccccccccccceecccccc---------------------
Confidence 9985 577888999999999999999877777788888888888888877643333222
Q ss_pred cccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCC
Q 005177 240 QLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRL 305 (710)
Q Consensus 240 ~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 305 (710)
.+++|+.+++++|++++..+..+..+++|++|+|++|+++ .+|..+..+++|+.|+|++|.+
T Consensus 146 ---~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~ 207 (266)
T d1p9ag_ 146 ---PTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207 (266)
T ss_dssp ---TCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCB
T ss_pred ---ccccchhcccccccccccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCC
Confidence 3334444444444444444444444555555555555544 3444444444455555555443
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.86 E-value=6.6e-23 Score=196.51 Aligned_cols=165 Identities=11% Similarity=0.035 Sum_probs=117.5
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccch-------------------hHHHHHHHHHHHhccCCCCceeEEEEE
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT-------------------RIKIVSEFITRIGTVRHKNLIRLLGFC 510 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~-------------------~~~~~~~e~~~l~~l~H~niv~l~g~~ 510 (710)
..+.||+|+||.||+|...+|+.||||.++.+.. .......|.+.+.+++|++++..+++.
T Consensus 4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~ 83 (191)
T d1zara2 4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE 83 (191)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence 4578999999999999988999999998763211 123345678889999999999987653
Q ss_pred EcCCceeEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccc
Q 005177 511 YNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 590 (710)
Q Consensus 511 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~ 590 (710)
..++||||++++.+.+ ++.....+++.|+++|++|||+. +|+||||||+|||++++ .++++|||.|+
T Consensus 84 ----~~~lvme~~~~~~~~~-----l~~~~~~~i~~ql~~~l~~lH~~---giiHrDiKP~NILv~~~-~~~liDFG~a~ 150 (191)
T d1zara2 84 ----GNAVLMELIDAKELYR-----VRVENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVSEE-GIWIIDFPQSV 150 (191)
T ss_dssp ----TTEEEEECCCCEEGGG-----CCCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEETT-EEEECCCTTCE
T ss_pred ----CCEEEEEeeccccccc-----hhhHHHHHHHHHHHHHHHHHhhC---CEEEccCChhheeeeCC-CEEEEECCCcc
Confidence 2379999999866543 23344567899999999999998 99999999999999965 58999999986
Q ss_pred cccccCCCCcccccccCchhhhhccCCccccceeeHHH
Q 005177 591 LTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGE 628 (710)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGv 628 (710)
..............-....+++ ..+++.++||||..-
T Consensus 151 ~~~~~~~~~~l~rd~~~~~~~f-~r~y~~~~d~~s~~~ 187 (191)
T d1zara2 151 EVGEEGWREILERDVRNIITYF-SRTYRTEKDINSAID 187 (191)
T ss_dssp ETTSTTHHHHHHHHHHHHHHHH-HHHHCCCCCHHHHHH
T ss_pred cCCCCCcHHHHHHHHHHHHHHH-cCCCCCcccHHHHHH
Confidence 5432110000000000011222 345778899999753
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.77 E-value=4.1e-17 Score=170.53 Aligned_cols=137 Identities=26% Similarity=0.282 Sum_probs=96.0
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEE
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 155 (710)
.+..+||+.++++ .+|.. +++|++|+|++|+|+ .+|.. +.+|+.|++++|+++. ++.. .++|++|+
T Consensus 39 ~l~~LdLs~~~L~-~lp~~-----~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~l~~n~l~~-l~~l---p~~L~~L~ 104 (353)
T d1jl5a_ 39 QAHELELNNLGLS-SLPEL-----PPHLESLVASCNSLT-ELPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLG 104 (353)
T ss_dssp TCSEEECTTSCCS-CCCSC-----CTTCSEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEE
T ss_pred CCCEEEeCCCCCC-CCCCC-----CCCCCEEECCCCCCc-ccccc---hhhhhhhhhhhcccch-hhhh---cccccccc
Confidence 3557899998886 46643 567999999999998 67754 4678999999998873 3321 14699999
Q ss_pred CCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccccccccccccccccccc
Q 005177 156 AFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQ 234 (710)
Q Consensus 156 L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~ 234 (710)
+++|.++ .+|. ++.+++|++|++++|.+... |.. ...+..+.+..+... .+..+..++.++.++++.|...
T Consensus 105 L~~n~l~-~lp~-~~~l~~L~~L~l~~~~~~~~-~~~---~~~l~~l~~~~~~~~--~~~~l~~l~~l~~L~l~~n~~~ 175 (353)
T d1jl5a_ 105 VSNNQLE-KLPE-LQNSSFLKIIDVDNNSLKKL-PDL---PPSLEFIAAGNNQLE--ELPELQNLPFLTAIYADNNSLK 175 (353)
T ss_dssp CCSSCCS-SCCC-CTTCTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCS--SCCCCTTCTTCCEEECCSSCCS
T ss_pred ccccccc-cccc-hhhhccceeecccccccccc-ccc---cccccchhhcccccc--ccccccccccceeccccccccc
Confidence 9999988 4664 68899999999999888743 322 345556666555432 2344566666777777666544
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.76 E-value=4.4e-18 Score=167.21 Aligned_cols=206 Identities=22% Similarity=0.354 Sum_probs=110.7
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEcc
Q 005177 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (710)
Q Consensus 102 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~ 181 (710)
++..++++.+.+++.. .+..+++|++|++++|+++. ++ .+..+++|++|++++|.+++..| +.++++|++++++
T Consensus 20 ~~~~~~l~~~~~~d~~--~~~~l~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~ 93 (227)
T d1h6ua2 20 NAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELS 93 (227)
T ss_dssp HHHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECC
T ss_pred HHHHHHhCCCCcCCcC--CHHHcCCcCEEECCCCCCCc-ch-hHhcCCCCcEeecCCceeecccc--ccccccccccccc
Confidence 3445566777776543 34567778888888887774 33 47778888888888887775433 6777777777777
Q ss_pred CCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccC
Q 005177 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261 (710)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~ 261 (710)
+|.++. ++ .+.++++|+.++++++...+..+ +...+.++.+.++.+.+....
T Consensus 94 ~n~~~~-i~-~l~~l~~L~~l~l~~~~~~~~~~--------------------------~~~~~~~~~l~~~~~~~~~~~ 145 (227)
T d1h6ua2 94 GNPLKN-VS-AIAGLQSIKTLDLTSTQITDVTP--------------------------LAGLSNLQVLYLDLNQITNIS 145 (227)
T ss_dssp SCCCSC-CG-GGTTCTTCCEEECTTSCCCCCGG--------------------------GTTCTTCCEEECCSSCCCCCG
T ss_pred cccccc-cc-cccccccccccccccccccccch--------------------------hccccchhhhhchhhhhchhh
Confidence 777763 33 46667777777777665443211 112233333444444433221
Q ss_pred chhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCC
Q 005177 262 PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLP 341 (710)
Q Consensus 262 p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 341 (710)
.+..+++|+.|++++|.+++.. .+.++++|+.|++++|++.+ ++ .++++++|++|+|++|++++. + .+..++
T Consensus 146 --~~~~~~~L~~L~l~~n~~~~~~--~l~~l~~L~~L~Ls~n~l~~-l~-~l~~l~~L~~L~Ls~N~lt~i-~-~l~~l~ 217 (227)
T d1h6ua2 146 --PLAGLTNLQYLSIGNAQVSDLT--PLANLSKLTTLKADDNKISD-IS-PLASLPNLIEVHLKNNQISDV-S-PLANTS 217 (227)
T ss_dssp --GGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECTTSCCCBC-G-GGTTCT
T ss_pred --hhccccccccccccccccccch--hhcccccceecccCCCccCC-Ch-hhcCCCCCCEEECcCCcCCCC-c-ccccCC
Confidence 1334445555555555443221 24444455555555555443 22 244444455555554444432 2 144444
Q ss_pred CCcEEecc
Q 005177 342 SLEILFIW 349 (710)
Q Consensus 342 ~L~~L~L~ 349 (710)
+|++|+++
T Consensus 218 ~L~~L~ls 225 (227)
T d1h6ua2 218 NLFIVTLT 225 (227)
T ss_dssp TCCEEEEE
T ss_pred CCCEEEee
Confidence 44444443
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.75 E-value=4e-18 Score=162.83 Aligned_cols=176 Identities=22% Similarity=0.271 Sum_probs=135.5
Q ss_pred CceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccC-CccccCCCCCcEEECcCCCCCCC
Q 005177 62 ACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQF-PVEIFNLTSLISLDISRNNFSGH 140 (710)
Q Consensus 62 ~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~ 140 (710)
.|+|..|.|+. ++++ .+|..+ .+.+++|+|++|.|++.+ +..|.++++|+.|+|++|.+.+.
T Consensus 7 ~C~~~~v~Cs~------------~~L~-~iP~~l----p~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~ 69 (192)
T d1w8aa_ 7 HCEGTTVDCTG------------RGLK-EIPRDI----PLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGI 69 (192)
T ss_dssp EEETTEEECTT------------SCCS-SCCSCC----CTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCB
T ss_pred EEcCCEEEEeC------------CCcC-ccCCCC----CCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccc
Confidence 36677677754 3344 455554 357999999999998755 55678999999999999999999
Q ss_pred CChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccccc
Q 005177 141 FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGML 220 (710)
Q Consensus 141 ~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 220 (710)
.+..+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|.+....+. ....
T Consensus 70 ~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~~-~~~~ 148 (192)
T d1w8aa_ 70 EPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL-AWFA 148 (192)
T ss_dssp CTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG-HHHH
T ss_pred cccccccccccceeeeccccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccch-HHHh
Confidence 999999999999999999999988888899999999999999999988888999999999999999988754321 1122
Q ss_pred ccccccccccccccccCCccccCCCccchhccccccCC
Q 005177 221 KTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS 258 (710)
Q Consensus 221 ~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~ 258 (710)
..++.+.+..+.+....|.. +..++.++++.|.+.
T Consensus 149 ~~l~~~~l~~~~~~c~~p~~---l~~~~l~~L~~n~l~ 183 (192)
T d1w8aa_ 149 EWLRKKSLNGGAARCGAPSK---VRDVQIKDLPHSEFK 183 (192)
T ss_dssp HHHHHHCCSGGGCBBCSSTT---TTTSBGGGSCTTTCC
T ss_pred hhhhhhcccCCCeEeCCChh---hcCCEeeecCHhhCc
Confidence 34555555556555544543 344556666666654
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.74 E-value=2.3e-16 Score=164.79 Aligned_cols=273 Identities=20% Similarity=0.230 Sum_probs=180.9
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEE
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 155 (710)
.++.+++++++++ .+|.. +.+|+.|++++|+++ .++. + .+.|++|++++|.+.. +|. ++.+++|++|+
T Consensus 59 ~L~~L~Ls~N~l~-~lp~~-----~~~L~~L~l~~n~l~-~l~~-l--p~~L~~L~L~~n~l~~-lp~-~~~l~~L~~L~ 126 (353)
T d1jl5a_ 59 HLESLVASCNSLT-ELPEL-----PQSLKSLLVDNNNLK-ALSD-L--PPLLEYLGVSNNQLEK-LPE-LQNSSFLKIID 126 (353)
T ss_dssp TCSEEECCSSCCS-SCCCC-----CTTCCEEECCSSCCS-CCCS-C--CTTCCEEECCSSCCSS-CCC-CTTCTTCCEEE
T ss_pred CCCEEECCCCCCc-ccccc-----hhhhhhhhhhhcccc-hhhh-h--cccccccccccccccc-ccc-hhhhccceeec
Confidence 5778899999987 66654 457999999999987 3332 1 2469999999999984 564 68899999999
Q ss_pred CCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccc
Q 005177 156 AFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG 235 (710)
Q Consensus 156 L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g 235 (710)
+++|.++.. |. ....+..+.+..+... .+..+..++.++.|++++|..... +.... ..+.+....+.+.
T Consensus 127 l~~~~~~~~-~~---~~~~l~~l~~~~~~~~--~~~~l~~l~~l~~L~l~~n~~~~~-~~~~~---~~~~l~~~~~~~~- 195 (353)
T d1jl5a_ 127 VDNNSLKKL-PD---LPPSLEFIAAGNNQLE--ELPELQNLPFLTAIYADNNSLKKL-PDLPL---SLESIVAGNNILE- 195 (353)
T ss_dssp CCSSCCSCC-CC---CCTTCCEEECCSSCCS--SCCCCTTCTTCCEEECCSSCCSSC-CCCCT---TCCEEECCSSCCS-
T ss_pred ccccccccc-cc---ccccccchhhcccccc--ccccccccccceeccccccccccc-ccccc---ccccccccccccc-
Confidence 999988743 32 2456777777766654 345677888889999988876532 22111 1222333322221
Q ss_pred cCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCC-------------------
Q 005177 236 NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLK------------------- 296 (710)
Q Consensus 236 ~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~------------------- 296 (710)
.+| .+..++.|+.+++++|.... +|. ...++..+.+..+.+..... ....+.
T Consensus 196 ~~~-~~~~l~~L~~l~l~~n~~~~-~~~---~~~~l~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~l~~l~~~~ 266 (353)
T d1jl5a_ 196 ELP-ELQNLPFLTTIYADNNLLKT-LPD---LPPSLEALNVRDNYLTDLPE----LPQSLTFLDVSENIFSGLSELPPNL 266 (353)
T ss_dssp SCC-CCTTCTTCCEEECCSSCCSS-CCS---CCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSEESCCCTTC
T ss_pred ccc-cccccccccccccccccccc-ccc---cccccccccccccccccccc----ccccccccccccccccccccccchh
Confidence 222 34567778888888776653 332 23456667777666653221 112233
Q ss_pred -EEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCC
Q 005177 297 -SLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTN 375 (710)
Q Consensus 297 -~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N 375 (710)
..++..+.+. .....+++|++|+|++|+++ .+|.. +++|+.|+|++|+++ .+|.. +.+|+.|++++|
T Consensus 267 ~~~~~~~~~~~----~~~~~~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~L~~N~L~-~l~~~---~~~L~~L~L~~N 334 (353)
T d1jl5a_ 267 YYLNASSNEIR----SLCDLPPSLEELNVSNNKLI-ELPAL---PPRLERLIASFNHLA-EVPEL---PQNLKQLHVEYN 334 (353)
T ss_dssp CEEECCSSCCS----EECCCCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSS
T ss_pred cccccccCccc----cccccCCCCCEEECCCCccC-ccccc---cCCCCEEECCCCcCC-ccccc---cCCCCEEECcCC
Confidence 3334443333 22334678999999999998 57753 689999999999998 67754 467999999999
Q ss_pred cCCccCcccccCCCceeeEec
Q 005177 376 NFNGSIPPDICSGGVLFKLIL 396 (710)
Q Consensus 376 ~l~g~ip~~~~~~~~L~~l~l 396 (710)
.++ .+|... ..|+.|.+
T Consensus 335 ~L~-~lp~~~---~~L~~L~~ 351 (353)
T d1jl5a_ 335 PLR-EFPDIP---ESVEDLRM 351 (353)
T ss_dssp CCS-SCCCCC---TTCCEEEC
T ss_pred cCC-CCCccc---cccCeeEC
Confidence 997 677543 34555554
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.74 E-value=1.2e-17 Score=164.05 Aligned_cols=208 Identities=23% Similarity=0.381 Sum_probs=144.8
Q ss_pred CCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEE
Q 005177 124 LTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLH 203 (710)
Q Consensus 124 l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 203 (710)
+.++..++++.+++++.+ .+..+.+|+.|++++|.++. ++ .+..+++|++|++++|++++..| +..+++|++|+
T Consensus 18 l~~~~~~~l~~~~~~d~~--~~~~l~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~ 91 (227)
T d1h6ua2 18 LANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELE 91 (227)
T ss_dssp HHHHHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEE
T ss_pred HHHHHHHHhCCCCcCCcC--CHHHcCCcCEEECCCCCCCc-ch-hHhcCCCCcEeecCCceeecccc--ccccccccccc
Confidence 344455677888887654 35678888999999998884 43 57888899999999888876433 78888888888
Q ss_pred ecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCC
Q 005177 204 LAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAG 283 (710)
Q Consensus 204 L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~ 283 (710)
+++|.++. ++ .+.++++|+.++++++...+. ..+...+.+..+.++.+.+..
T Consensus 92 ~~~n~~~~-i~-------------------------~l~~l~~L~~l~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~ 143 (227)
T d1h6ua2 92 LSGNPLKN-VS-------------------------AIAGLQSIKTLDLTSTQITDV--TPLAGLSNLQVLYLDLNQITN 143 (227)
T ss_dssp CCSCCCSC-CG-------------------------GGTTCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECCSSCCCC
T ss_pred cccccccc-cc-------------------------ccccccccccccccccccccc--chhccccchhhhhchhhhhch
Confidence 88876642 11 234556666677766665543 235566778888888877764
Q ss_pred CCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCC
Q 005177 284 QVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGR 363 (710)
Q Consensus 284 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~ 363 (710)
.. .+..+++|+.|++++|.+.... .++++++|+.|+|++|++++ ++ .+..+++|++|+|++|++++ +| .+.+
T Consensus 144 ~~--~~~~~~~L~~L~l~~n~~~~~~--~l~~l~~L~~L~Ls~n~l~~-l~-~l~~l~~L~~L~Ls~N~lt~-i~-~l~~ 215 (227)
T d1h6ua2 144 IS--PLAGLTNLQYLSIGNAQVSDLT--PLANLSKLTTLKADDNKISD-IS-PLASLPNLIEVHLKNNQISD-VS-PLAN 215 (227)
T ss_dssp CG--GGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECTTSCCCB-CG-GGTT
T ss_pred hh--hhccccccccccccccccccch--hhcccccceecccCCCccCC-Ch-hhcCCCCCCEEECcCCcCCC-Cc-cccc
Confidence 33 3566777888888888776432 36777788888888887764 33 36677777777777777774 33 2667
Q ss_pred CCCCcEEECC
Q 005177 364 NSKLRWVDVS 373 (710)
Q Consensus 364 ~~~L~~L~ls 373 (710)
+++|+.|+++
T Consensus 216 l~~L~~L~ls 225 (227)
T d1h6ua2 216 TSNLFIVTLT 225 (227)
T ss_dssp CTTCCEEEEE
T ss_pred CCCCCEEEee
Confidence 7777777765
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=4.6e-18 Score=168.69 Aligned_cols=87 Identities=14% Similarity=0.142 Sum_probs=61.8
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCC-ChhhcCCCCCCEEECC-CCCCCcCCchhccCCCCCCEE
Q 005177 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHF-PGGIQSLRNLLVLDAF-SNSFSGSVPAEISQLEHLKVL 178 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~l~~L~~L~~L~L~-~N~l~~~~p~~~~~L~~L~~L 178 (710)
+.+++|||++|.++...+..|.++++|++|+|++|.+...+ +..|.++++++++++. .|++....+..|.++++|++|
T Consensus 29 ~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l 108 (242)
T d1xwdc1 29 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 108 (242)
T ss_dssp SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEE
T ss_pred CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccccccccccccccccccccccccc
Confidence 46788888888887544456778888888888888776544 3456777777777765 356666666667777777777
Q ss_pred EccCCCCCC
Q 005177 179 NLAGSYFSG 187 (710)
Q Consensus 179 ~L~~n~l~~ 187 (710)
++++|.+..
T Consensus 109 ~l~~~~l~~ 117 (242)
T d1xwdc1 109 LISNTGIKH 117 (242)
T ss_dssp EEESCCCCS
T ss_pred ccchhhhcc
Confidence 777777753
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.72 E-value=7.7e-18 Score=160.86 Aligned_cols=172 Identities=16% Similarity=0.218 Sum_probs=136.0
Q ss_pred cEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCC-ChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccC
Q 005177 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHF-PGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182 (710)
Q Consensus 104 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~ 182 (710)
++++.++|+++ .+|..+. +++++|+|++|+|++.+ +..|.++++|+.|+|++|.+.+..+..+..+++|++|+|++
T Consensus 11 ~~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~ 87 (192)
T d1w8aa_ 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecc
Confidence 57899999998 7887764 78999999999998744 56789999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCc
Q 005177 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP 262 (710)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p 262 (710)
|++++..|..|.++++|++|+|++|++++..|..+..+++|+++++++|.+....+... -...++.+.+..+.++...|
T Consensus 88 N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~~~~-~~~~l~~~~l~~~~~~c~~p 166 (192)
T d1w8aa_ 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAW-FAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHH-HHHHHHHHCCSGGGCBBCSS
T ss_pred ccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccchHH-HhhhhhhhcccCCCeEeCCC
Confidence 99998888899999999999999999998888888999999999999988765433211 11235555666666655555
Q ss_pred hhccCCCCCcEEEccccccC
Q 005177 263 KELSNLTKLESLFLFRNQLA 282 (710)
Q Consensus 263 ~~l~~l~~L~~L~L~~n~l~ 282 (710)
..+ ..++.++|+.|.+.
T Consensus 167 ~~l---~~~~l~~L~~n~l~ 183 (192)
T d1w8aa_ 167 SKV---RDVQIKDLPHSEFK 183 (192)
T ss_dssp TTT---TTSBGGGSCTTTCC
T ss_pred hhh---cCCEeeecCHhhCc
Confidence 433 33444455555443
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=3.1e-17 Score=162.57 Aligned_cols=207 Identities=16% Similarity=0.125 Sum_probs=156.6
Q ss_pred cCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCC-chhccCCCCCCEEEccC-CCCCCCCCccc
Q 005177 116 QFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSV-PAEISQLEHLKVLNLAG-SYFSGPIPSQF 193 (710)
Q Consensus 116 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~-p~~~~~L~~L~~L~L~~-n~l~~~~p~~~ 193 (710)
.+|..+. +++++|+|++|.++...+..|.++++|++|++++|.+...+ +..|.+++++++|.+.. |++....+..|
T Consensus 22 ~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~ 99 (242)
T d1xwdc1 22 EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAF 99 (242)
T ss_dssp SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSE
T ss_pred CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccccccccccccc
Confidence 4565543 57999999999999766678999999999999999998755 45688999999999864 67887888889
Q ss_pred CCCCCCCeEEecCCcCCCCCc-ccccccccccccccccccccccCCccccCCC-ccchhccccccCCccCchhccCCCCC
Q 005177 194 GSFKSLEFLHLAGNLLNDQIP-AELGMLKTVTHMEIGYNFYQGNIPWQLGNMS-EVQYLDIAGANLSGSIPKELSNLTKL 271 (710)
Q Consensus 194 ~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~-~L~~L~ls~n~l~g~~p~~l~~l~~L 271 (710)
.++++|+.|++++|.+....+ ..+..++.+..+..+.+.+...-+..+..++ .++.|++++|+++...+ .....+++
T Consensus 100 ~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i~~-~~~~~~~l 178 (242)
T d1xwdc1 100 QNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHN-CAFNGTQL 178 (242)
T ss_dssp ECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECT-TTTTTCCE
T ss_pred cccccccccccchhhhcccccccccccccccccccccccccccccccccccccccceeeeccccccccccc-ccccchhh
Confidence 999999999999999875432 2334455665555566665544444555554 78889999999985444 44455666
Q ss_pred cEE-EccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcc
Q 005177 272 ESL-FLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLM 325 (710)
Q Consensus 272 ~~L-~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 325 (710)
..+ ++++|+++...+..|.++++|++|++++|+++...+..|.++++|+.+++.
T Consensus 179 ~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~~ 233 (242)
T d1xwdc1 179 DELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTY 233 (242)
T ss_dssp EEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSEE
T ss_pred hccccccccccccccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcccccCcCC
Confidence 555 567788886556678999999999999999996555567777777666553
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.70 E-value=5.3e-17 Score=157.24 Aligned_cols=182 Identities=27% Similarity=0.345 Sum_probs=117.9
Q ss_pred EEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCC
Q 005177 105 DLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY 184 (710)
Q Consensus 105 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~ 184 (710)
..+++.+.+.+.++. ..+.+|++|++++|.++.. + .+..+++|++|+|++|++++ ++ .++++++|++|++++|+
T Consensus 28 ~~~l~~~~~~~~~~~--~~L~~L~~L~l~~~~i~~l-~-~l~~l~~L~~L~L~~n~i~~-l~-~~~~l~~L~~L~l~~n~ 101 (210)
T d1h6ta2 28 KDNLKKKSVTDAVTQ--NELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTD-IK-PLANLKNLGWLFLDENK 101 (210)
T ss_dssp HHHTTCSCTTSEECH--HHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSC
T ss_pred HHHhCcCccCCccCH--HHhcCccEEECcCCCCCCc-h-hHhhCCCCCEEeCCCccccC-cc-ccccCcccccccccccc
Confidence 345666666655542 3466777788888777643 2 36777888888888887775 33 35777788888888887
Q ss_pred CCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchh
Q 005177 185 FSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE 264 (710)
Q Consensus 185 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~ 264 (710)
+++ +| .+.++++|+.|++++|.+.. + .. +..+++++.+++++|.+++ +..
T Consensus 102 i~~-l~-~l~~l~~L~~L~l~~~~~~~-~-~~------------------------l~~l~~l~~l~~~~n~l~~--~~~ 151 (210)
T d1h6ta2 102 VKD-LS-SLKDLKKLKSLSLEHNGISD-I-NG------------------------LVHLPQLESLYLGNNKITD--ITV 151 (210)
T ss_dssp CCC-GG-GGTTCTTCCEEECTTSCCCC-C-GG------------------------GGGCTTCCEEECCSSCCCC--CGG
T ss_pred ccc-cc-cccccccccccccccccccc-c-cc------------------------ccccccccccccccccccc--ccc
Confidence 774 44 47777778888877776542 1 12 3334455555555555543 223
Q ss_pred ccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEccc
Q 005177 265 LSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMY 326 (710)
Q Consensus 265 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 326 (710)
+..+++|+.+++++|++++. + .+.++++|+.|++++|+++. +| .+.++++|++|+|++
T Consensus 152 ~~~l~~L~~l~l~~n~l~~i-~-~l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 152 LSRLTKLDTLSLEDNQISDI-V-PLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFS 209 (210)
T ss_dssp GGGCTTCSEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEE
T ss_pred cccccccccccccccccccc-c-cccCCCCCCEEECCCCCCCC-Ch-hhcCCCCCCEEEccC
Confidence 45567777777777777653 2 26677777888888777763 44 477778888887753
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.69 E-value=1.2e-16 Score=154.80 Aligned_cols=178 Identities=23% Similarity=0.310 Sum_probs=126.6
Q ss_pred cCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCC
Q 005177 82 LSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSF 161 (710)
Q Consensus 82 l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l 161 (710)
+....+.+.++. .. +..|+.|++++|.++.. + .+..+++|++|+|++|++++.. .++++++|++|++++|++
T Consensus 31 l~~~~~~~~~~~--~~--L~~L~~L~l~~~~i~~l-~-~l~~l~~L~~L~L~~n~i~~l~--~~~~l~~L~~L~l~~n~i 102 (210)
T d1h6ta2 31 LKKKSVTDAVTQ--NE--LNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIK--PLANLKNLGWLFLDENKV 102 (210)
T ss_dssp TTCSCTTSEECH--HH--HHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCC
T ss_pred hCcCccCCccCH--HH--hcCccEEECcCCCCCCc-h-hHhhCCCCCEEeCCCccccCcc--ccccCccccccccccccc
Confidence 344444444432 12 67899999999999753 3 4788999999999999999743 378999999999999999
Q ss_pred CcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccc
Q 005177 162 SGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQL 241 (710)
Q Consensus 162 ~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l 241 (710)
++ +| .+.++++|+.|++++|.+.. + ..+.++++|+.+++++|.+++. ..+..+
T Consensus 103 ~~-l~-~l~~l~~L~~L~l~~~~~~~-~-~~l~~l~~l~~l~~~~n~l~~~--~~~~~l--------------------- 155 (210)
T d1h6ta2 103 KD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRL--------------------- 155 (210)
T ss_dssp CC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGC---------------------
T ss_pred cc-cc-cccccccccccccccccccc-c-cccccccccccccccccccccc--cccccc---------------------
Confidence 85 55 58999999999999999873 3 4688899999999999988642 233334
Q ss_pred cCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEcc
Q 005177 242 GNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLS 301 (710)
Q Consensus 242 ~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 301 (710)
++|+++++++|++++. + .+.++++|+.|++++|+++. +| .+.++++|++|+|+
T Consensus 156 ---~~L~~l~l~~n~l~~i-~-~l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 156 ---TKLDTLSLEDNQISDI-V-PLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELF 208 (210)
T ss_dssp ---TTCSEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEE
T ss_pred ---cccccccccccccccc-c-cccCCCCCCEEECCCCCCCC-Ch-hhcCCCCCCEEEcc
Confidence 4455555555555532 2 25556666666666666653 33 35566666666664
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.68 E-value=2.4e-16 Score=151.19 Aligned_cols=178 Identities=25% Similarity=0.377 Sum_probs=96.2
Q ss_pred cEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCC
Q 005177 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 183 (710)
Q Consensus 104 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n 183 (710)
..++++.+.+++.++ ...+.+|++|++++|.++. ++ .+..+++|++|++++|++++..| ++++++|++|++++|
T Consensus 21 i~~~l~~~~~~~~~~--~~~l~~l~~L~l~~~~i~~-l~-~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n 94 (199)
T d2omxa2 21 MKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNN 94 (199)
T ss_dssp HHHHTTCSSTTSEEC--HHHHTTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred HHHHhCCCCCCCccC--HHHhcCCCEEECCCCCCCC-cc-ccccCCCcCcCccccccccCccc--ccCCccccccccccc
Confidence 344566666665443 2456677777777777764 32 46677777777777777765322 677777777777777
Q ss_pred CCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCch
Q 005177 184 YFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPK 263 (710)
Q Consensus 184 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~ 263 (710)
.+.. +| .+.++++|+.|++++|...... .+..+++|+.|++++|++.. ++
T Consensus 95 ~~~~-~~-~l~~l~~L~~L~l~~~~~~~~~--------------------------~~~~l~~L~~L~l~~n~l~~-~~- 144 (199)
T d2omxa2 95 QIAD-IT-PLANLTNLTGLTLFNNQITDID--------------------------PLKNLTNLNRLELSSNTISD-IS- 144 (199)
T ss_dssp CCCC-CG-GGTTCTTCSEEECCSSCCCCCG--------------------------GGTTCTTCSEEECCSSCCCC-CG-
T ss_pred cccc-cc-cccccccccccccccccccccc--------------------------ccchhhhhHHhhhhhhhhcc-cc-
Confidence 6653 33 3666667777766666544210 12233444444444444432 22
Q ss_pred hccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCE
Q 005177 264 ELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRL 321 (710)
Q Consensus 264 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 321 (710)
.+..+++|+.|++++|++++.. .+.++++|++|++++|+++. ++ .++.+++|+.
T Consensus 145 ~l~~~~~L~~L~l~~n~l~~l~--~l~~l~~L~~L~ls~N~i~~-i~-~l~~L~~L~~ 198 (199)
T d2omxa2 145 ALSGLTSLQQLNFSSNQVTDLK--PLANLTTLERLDISSNKVSD-IS-VLAKLTNLES 198 (199)
T ss_dssp GGTTCTTCSEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSE
T ss_pred cccccccccccccccccccCCc--cccCCCCCCEEECCCCCCCC-Cc-cccCCCCCCc
Confidence 2444455555555555544321 24444555555555555443 22 2444444443
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.66 E-value=5.1e-16 Score=148.85 Aligned_cols=161 Identities=22% Similarity=0.363 Sum_probs=118.0
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
+..++.|++++|.++. ++ .+..+++|++|+|++|++++..| ++++++|++|++++|.+.. +| .+.++++|+.|+
T Consensus 39 l~~l~~L~l~~~~i~~-l~-~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~-~~-~l~~l~~L~~L~ 112 (199)
T d2omxa2 39 LDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD-IT-PLANLTNLTGLT 112 (199)
T ss_dssp HTTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEE
T ss_pred hcCCCEEECCCCCCCC-cc-ccccCCCcCcCccccccccCccc--ccCCccccccccccccccc-cc-cccccccccccc
Confidence 6789999999999974 43 57889999999999999987543 8999999999999999874 44 488999999999
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCc
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g 259 (710)
+++|.+... ..+..+++|+.|++++|.+.. +| .+..++ +|+.|++++|++++
T Consensus 113 l~~~~~~~~--~~~~~l~~L~~L~l~~n~l~~-~~-~l~~~~------------------------~L~~L~l~~n~l~~ 164 (199)
T d2omxa2 113 LFNNQITDI--DPLKNLTNLNRLELSSNTISD-IS-ALSGLT------------------------SLQQLNFSSNQVTD 164 (199)
T ss_dssp CCSSCCCCC--GGGTTCTTCSEEECCSSCCCC-CG-GGTTCT------------------------TCSEEECCSSCCCC
T ss_pred ccccccccc--cccchhhhhHHhhhhhhhhcc-cc-cccccc------------------------cccccccccccccC
Confidence 999998753 358889999999999998763 22 344444 44555555555543
Q ss_pred cCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEE
Q 005177 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSL 298 (710)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 298 (710)
. + .++++++|+.|++++|++++ ++ .+..+++|+.|
T Consensus 165 l-~-~l~~l~~L~~L~ls~N~i~~-i~-~l~~L~~L~~L 199 (199)
T d2omxa2 165 L-K-PLANLTTLERLDISSNKVSD-IS-VLAKLTNLESL 199 (199)
T ss_dssp C-G-GGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSEE
T ss_pred C-c-cccCCCCCCEEECCCCCCCC-Cc-cccCCCCCCcC
Confidence 2 2 25556666666666666653 22 35556666554
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.65 E-value=1.8e-18 Score=187.64 Aligned_cols=327 Identities=16% Similarity=0.161 Sum_probs=189.0
Q ss_pred cEEEEEcCCCCCccc-CCcchhhhcCCCCcEEECCCCcCcc----cCCccccCCCCCcEEECcCCCCCCC----CChhhc
Q 005177 76 IVVGINLSMKGLSGA-LPGKPLRIFFNELVDLNLSHNSFSG----QFPVEIFNLTSLISLDISRNNFSGH----FPGGIQ 146 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~-~~~~~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~ 146 (710)
.+..+|++.+++++. +..-+.. ++++++|+|++|.++. .++..+..+++|++|||++|.++.. +...+.
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~--l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~ 80 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPL--LQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ 80 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHH--HTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC
T ss_pred CCCEEEeeCCcCChHHHHHHHHh--CCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHh
Confidence 478899999998764 2222333 7889999999999873 3455677899999999999988532 122222
Q ss_pred -CCCCCCEEECCCCCCCcC----CchhccCCCCCCEEEccCCCCCCCCCc----c-------------------------
Q 005177 147 -SLRNLLVLDAFSNSFSGS----VPAEISQLEHLKVLNLAGSYFSGPIPS----Q------------------------- 192 (710)
Q Consensus 147 -~L~~L~~L~L~~N~l~~~----~p~~~~~L~~L~~L~L~~n~l~~~~p~----~------------------------- 192 (710)
...+|++|+|++|.++.. ++..+..+++|++|+|++|.++..-.. .
T Consensus 81 ~~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 160 (460)
T d1z7xw1 81 TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEP 160 (460)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH
T ss_pred cCCCCCCEEECCCCCccccccccccchhhccccccccccccccchhhhhhhhhhcccccccccccccccccccchhhhcc
Confidence 235799999999998753 466778899999999999987531000 0
Q ss_pred ----cCCCCCCCeEEecCCcCCCC----Cccccc-cccccccccccccccccc----CCccccCCCccchhccccccCCc
Q 005177 193 ----FGSFKSLEFLHLAGNLLNDQ----IPAELG-MLKTVTHMEIGYNFYQGN----IPWQLGNMSEVQYLDIAGANLSG 259 (710)
Q Consensus 193 ----~~~l~~L~~L~L~~N~l~~~----~p~~l~-~l~~L~~L~l~~n~~~g~----~p~~l~~l~~L~~L~ls~n~l~g 259 (710)
+.....++.++++++..... ....+. .-.....+++..+..... ....+...+.++.+++++|....
T Consensus 161 ~~~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~n~~~~ 240 (460)
T d1z7xw1 161 LASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 240 (460)
T ss_dssp HHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccchhhhcccccccccccccccchhhccccc
Confidence 11123455555554433210 000000 001122233333322110 11123345566777777766532
Q ss_pred -----cCchhccCCCCCcEEEccccccCCCC----CccccCCCCCCEEEccCCCCCCCCCccc-----cCCCCCCEEEcc
Q 005177 260 -----SIPKELSNLTKLESLFLFRNQLAGQV----PWEFSRVTTLKSLDLSDNRLSGPIPESF-----ADLKNLRLLSLM 325 (710)
Q Consensus 260 -----~~p~~l~~l~~L~~L~L~~n~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-----~~l~~L~~L~Ls 325 (710)
..+........++.+++++|.+.... ...+...+.++.+++++|.+.......+ .....|+.++++
T Consensus 241 ~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~ 320 (460)
T d1z7xw1 241 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVK 320 (460)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred cccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhcccccccccccccccc
Confidence 12233344567777777777665321 1223456677777777777653221111 123467777777
Q ss_pred cccCcccCCc----ccCCCCCCcEEeccCCCCCCC----CCcccC-CCCCCcEEECCCCcCCcc----CcccccCCCcee
Q 005177 326 YNEMSGTVPE----SLVQLPSLEILFIWNNYFSGS----LPENLG-RNSKLRWVDVSTNNFNGS----IPPDICSGGVLF 392 (710)
Q Consensus 326 ~N~l~g~~p~----~~~~l~~L~~L~L~~N~l~g~----~p~~l~-~~~~L~~L~ls~N~l~g~----ip~~~~~~~~L~ 392 (710)
+|.++..... .+...++|++|+|++|+++.. ++..+. ..+.|++|++++|+++.. ++..+...++|+
T Consensus 321 ~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~ 400 (460)
T d1z7xw1 321 SCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLR 400 (460)
T ss_dssp TSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCC
T ss_pred ccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHHHHHHHHHHhcCCCCC
Confidence 7776643222 233456777777777776532 233332 345677777777777632 344455567777
Q ss_pred eEecccCCcccc
Q 005177 393 KLILFSNNFTGI 404 (710)
Q Consensus 393 ~l~l~~N~l~g~ 404 (710)
+|++++|+++..
T Consensus 401 ~L~Ls~N~i~~~ 412 (460)
T d1z7xw1 401 ELDLSNNCLGDA 412 (460)
T ss_dssp EEECCSSSCCHH
T ss_pred EEECCCCcCCHH
Confidence 777777777653
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.60 E-value=4.4e-18 Score=184.53 Aligned_cols=303 Identities=17% Similarity=0.206 Sum_probs=197.1
Q ss_pred CCcEEECCCCcCccc-CCccccCCCCCcEEECcCCCCCC----CCChhhcCCCCCCEEECCCCCCCcC----Cchhcc-C
Q 005177 102 ELVDLNLSHNSFSGQ-FPVEIFNLTSLISLDISRNNFSG----HFPGGIQSLRNLLVLDAFSNSFSGS----VPAEIS-Q 171 (710)
Q Consensus 102 ~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~----~~p~~l~~L~~L~~L~L~~N~l~~~----~p~~~~-~ 171 (710)
.|+.||+++|++++. +..-+..+++|++|+|++|.++. .++..+..+++|++|||++|.++.. +...+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 579999999999864 23335578999999999999873 3455678899999999999998632 222222 2
Q ss_pred CCCCCEEEccCCCCCCC----CCcccCCCCCCCeEEecCCcCCCCCccccc-----------------------------
Q 005177 172 LEHLKVLNLAGSYFSGP----IPSQFGSFKSLEFLHLAGNLLNDQIPAELG----------------------------- 218 (710)
Q Consensus 172 L~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~----------------------------- 218 (710)
..+|++|+|++|+++.. ++..+..+++|++|++++|.++..-...+.
T Consensus 83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (460)
T d1z7xw1 83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLA 162 (460)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCCCCEEECCCCCccccccccccchhhccccccccccccccchhhhhhhhhhcccccccccccccccccccchhhhcccc
Confidence 35799999999999753 456678899999999999987532111110
Q ss_pred ----cccccccccccccccccc----CCccc-cCCCccchhccccccCCcc----CchhccCCCCCcEEEccccccCC--
Q 005177 219 ----MLKTVTHMEIGYNFYQGN----IPWQL-GNMSEVQYLDIAGANLSGS----IPKELSNLTKLESLFLFRNQLAG-- 283 (710)
Q Consensus 219 ----~l~~L~~L~l~~n~~~g~----~p~~l-~~l~~L~~L~ls~n~l~g~----~p~~l~~l~~L~~L~L~~n~l~~-- 283 (710)
....++.++++.+..... ....+ ..-.....+++..+.+... ....+...+.++.++++.|.+..
T Consensus 163 ~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~n~~~~~~ 242 (460)
T d1z7xw1 163 SVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVG 242 (460)
T ss_dssp HHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccchhhhcccccccccccccccchhhccccccc
Confidence 011122222222211100 00000 0111233344444443311 11234456889999999987643
Q ss_pred ---CCCccccCCCCCCEEEccCCCCCCC----CCccccCCCCCCEEEcccccCcccCCcc----c-CCCCCCcEEeccCC
Q 005177 284 ---QVPWEFSRVTTLKSLDLSDNRLSGP----IPESFADLKNLRLLSLMYNEMSGTVPES----L-VQLPSLEILFIWNN 351 (710)
Q Consensus 284 ---~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~----~-~~l~~L~~L~L~~N 351 (710)
..+........++.+++++|.+... ....+...+.++.+++++|.++...... + ...+.|+.+++++|
T Consensus 243 ~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~~ 322 (460)
T d1z7xw1 243 MAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSC 322 (460)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTS
T ss_pred cchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhcccccccccccccccccc
Confidence 1223345567899999999988643 2334566889999999999987432221 1 23468999999999
Q ss_pred CCCCCCCc----ccCCCCCCcEEECCCCcCCcc----Cccccc-CCCceeeEecccCCcccc
Q 005177 352 YFSGSLPE----NLGRNSKLRWVDVSTNNFNGS----IPPDIC-SGGVLFKLILFSNNFTGI 404 (710)
Q Consensus 352 ~l~g~~p~----~l~~~~~L~~L~ls~N~l~g~----ip~~~~-~~~~L~~l~l~~N~l~g~ 404 (710)
.++..... .+....+|+.|++++|.++.. ++..+. ..+.|++|++++|+++..
T Consensus 323 ~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~ 384 (460)
T d1z7xw1 323 SFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDS 384 (460)
T ss_dssp CCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHH
T ss_pred chhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChH
Confidence 98754322 234557899999999999753 344443 356799999999999864
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=5.9e-16 Score=157.12 Aligned_cols=100 Identities=18% Similarity=0.257 Sum_probs=49.0
Q ss_pred EEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCC-CChhhcCCCCCCEEECC
Q 005177 79 GINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGH-FPGGIQSLRNLLVLDAF 157 (710)
Q Consensus 79 ~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~l~~L~~L~~L~L~ 157 (710)
.+|++++.+.+.....+.. ..+..+.++.......+. ......+|++|||+++.++.. ++..+..+++|++|+|+
T Consensus 4 ~lDLs~~~l~~~~l~~l~~---~~~~~lrl~~~~~~~~~~-~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~ 79 (284)
T d2astb2 4 TLDLTGKNLHPDVTGRLLS---QGVIAFRCPRSFMDQPLA-EHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLE 79 (284)
T ss_dssp EEECTTCBCCHHHHHHHHH---TTCSEEECTTCEECSCCC-SCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECT
T ss_pred EEECCCCCCCchHHHHHHh---ccceEeeccccccccchh-hhccCCCCCEEECCCCccCHHHHHHHHHhCCCccccccc
Confidence 3455555544332222221 234455555544432221 223444566666666555432 23334555666666666
Q ss_pred CCCCCcCCchhccCCCCCCEEEccC
Q 005177 158 SNSFSGSVPAEISQLEHLKVLNLAG 182 (710)
Q Consensus 158 ~N~l~~~~p~~~~~L~~L~~L~L~~ 182 (710)
++.++...+..++.+++|++|+|++
T Consensus 80 ~~~l~~~~~~~l~~~~~L~~L~Ls~ 104 (284)
T d2astb2 80 GLRLSDPIVNTLAKNSNLVRLNLSG 104 (284)
T ss_dssp TCBCCHHHHHHHTTCTTCSEEECTT
T ss_pred ccCCCcHHHHHHhcCCCCcCccccc
Confidence 6665555555555566666666655
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=1.8e-15 Score=153.51 Aligned_cols=256 Identities=18% Similarity=0.235 Sum_probs=160.9
Q ss_pred cEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcC-CchhccCCCCCCEEEccC
Q 005177 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGS-VPAEISQLEHLKVLNLAG 182 (710)
Q Consensus 104 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~-~p~~~~~L~~L~~L~L~~ 182 (710)
++|||+++.+.......+.. ..+..+.++.+.....+. ......+|++|||+++.++.. ++..+..+++|++|+|++
T Consensus 3 ~~lDLs~~~l~~~~l~~l~~-~~~~~lrl~~~~~~~~~~-~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~ 80 (284)
T d2astb2 3 QTLDLTGKNLHPDVTGRLLS-QGVIAFRCPRSFMDQPLA-EHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEG 80 (284)
T ss_dssp SEEECTTCBCCHHHHHHHHH-TTCSEEECTTCEECSCCC-SCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTT
T ss_pred CEEECCCCCCCchHHHHHHh-ccceEeeccccccccchh-hhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccc
Confidence 46788877765332222222 234566666655543322 234556788888888777643 345567788888888888
Q ss_pred CCCCCCCCcccCCCCCCCeEEecCC-cCCCC-Cccccccccccccccccccc-ccc-cCCcccc-CCCccchhccccc--
Q 005177 183 SYFSGPIPSQFGSFKSLEFLHLAGN-LLNDQ-IPAELGMLKTVTHMEIGYNF-YQG-NIPWQLG-NMSEVQYLDIAGA-- 255 (710)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~l~~l~~L~~L~l~~n~-~~g-~~p~~l~-~l~~L~~L~ls~n-- 255 (710)
+.+++..+..++.+++|+.|+++++ .++.. +..-...+++|++|+++++. ++. .++..+. ..++|+.|+++++
T Consensus 81 ~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~ 160 (284)
T d2astb2 81 LRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRK 160 (284)
T ss_dssp CBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGG
T ss_pred cCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccccccccccccccccchhhhcccccccchhhhccccc
Confidence 8777666677777888888888774 34321 12223456778888887642 221 1222222 2356788888764
Q ss_pred cCCcc-CchhccCCCCCcEEEcccc-ccCCCCCccccCCCCCCEEEccCC-CCCCCCCccccCCCCCCEEEcccccCccc
Q 005177 256 NLSGS-IPKELSNLTKLESLFLFRN-QLAGQVPWEFSRVTTLKSLDLSDN-RLSGPIPESFADLKNLRLLSLMYNEMSGT 332 (710)
Q Consensus 256 ~l~g~-~p~~l~~l~~L~~L~L~~n-~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 332 (710)
.++.. +.....++++|++|++++| .+++.....+..+++|++|++++| .+++.....++++++|+.|+++++--.+.
T Consensus 161 ~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~~~d~~ 240 (284)
T d2astb2 161 NLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGT 240 (284)
T ss_dssp GSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTSSCTTC
T ss_pred ccccccccccccccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCCCCHHH
Confidence 33322 2333456788999999875 477666777888899999999984 67766666788899999999988722222
Q ss_pred CCcccCCCCCCcEEeccCCCCCCCCCcccCCC
Q 005177 333 VPESLVQLPSLEILFIWNNYFSGSLPENLGRN 364 (710)
Q Consensus 333 ~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~ 364 (710)
++.....+|+|+ +..+++++..++.+++.
T Consensus 241 l~~l~~~lp~L~---i~~~~ls~~~~~~~~~~ 269 (284)
T d2astb2 241 LQLLKEALPHLQ---INCSHFTTIARPTIGNK 269 (284)
T ss_dssp HHHHHHHSTTSE---ESCCCSCCTTCSSCSST
T ss_pred HHHHHHhCcccc---ccCccCCCCCCCccCcc
Confidence 332233456654 56778887666666543
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.50 E-value=4.1e-14 Score=123.96 Aligned_cols=103 Identities=27% Similarity=0.365 Sum_probs=85.3
Q ss_pred cEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCC
Q 005177 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 183 (710)
Q Consensus 104 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n 183 (710)
|.|||++|+++ .+| .+..+++|++|++++|.++ .+|..++.+++|++|++++|.++. +| .+.++++|++|++++|
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCC
Confidence 57899999997 445 4888999999999999998 467788999999999999999985 45 4889999999999999
Q ss_pred CCCCCC-CcccCCCCCCCeEEecCCcCCC
Q 005177 184 YFSGPI-PSQFGSFKSLEFLHLAGNLLND 211 (710)
Q Consensus 184 ~l~~~~-p~~~~~l~~L~~L~L~~N~l~~ 211 (710)
+++... ...+..+++|++|++++|.++.
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i~~ 104 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred ccCCCCCchhhcCCCCCCEEECCCCcCCc
Confidence 997532 2467888999999999998764
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=3.6e-14 Score=130.63 Aligned_cols=107 Identities=21% Similarity=0.176 Sum_probs=73.4
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
...++.|||++|+|+ .+|..+..+++|++|||++|+++. ++ .|..+++|++|++++|.++...+..+..+++|++|+
T Consensus 17 ~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~~-l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~ 93 (162)
T d1a9na_ 17 AVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRK-LD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 93 (162)
T ss_dssp TTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCE-EC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred cCcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCCc-cC-CcccCcchhhhhcccccccCCCccccccccccccce
Confidence 446777777777776 345555667777777777777764 33 467777777777777777755455556677777777
Q ss_pred ccCCCCCCCCC--cccCCCCCCCeEEecCCcCC
Q 005177 180 LAGSYFSGPIP--SQFGSFKSLEFLHLAGNLLN 210 (710)
Q Consensus 180 L~~n~l~~~~p--~~~~~l~~L~~L~L~~N~l~ 210 (710)
|++|+++. ++ ..+..+++|++|++++|.++
T Consensus 94 L~~N~i~~-~~~l~~l~~l~~L~~L~l~~N~i~ 125 (162)
T d1a9na_ 94 LTNNSLVE-LGDLDPLASLKSLTYLCILRNPVT 125 (162)
T ss_dssp CCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGG
T ss_pred eccccccc-cccccccccccccchhhcCCCccc
Confidence 77777763 22 34666777777777777664
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=4.1e-14 Score=130.31 Aligned_cols=111 Identities=19% Similarity=0.075 Sum_probs=84.6
Q ss_pred cccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCC
Q 005177 120 EIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSL 199 (710)
Q Consensus 120 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L 199 (710)
.+.++.+|++|||++|+|+. +|..+..+++|++|||++|.++. ++ .+..+++|++|++++|+++...+..+..+++|
T Consensus 13 ~~~n~~~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~~-l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L 89 (162)
T d1a9na_ 13 QYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRK-LD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 89 (162)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCE-EC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred hccCcCcCcEEECCCCCCCc-cCccccccccCCEEECCCCCCCc-cC-CcccCcchhhhhcccccccCCCcccccccccc
Confidence 56788899999999999985 57777889999999999999984 44 58899999999999999986555556789999
Q ss_pred CeEEecCCcCCCCCc-ccccccccccccccccccc
Q 005177 200 EFLHLAGNLLNDQIP-AELGMLKTVTHMEIGYNFY 233 (710)
Q Consensus 200 ~~L~L~~N~l~~~~p-~~l~~l~~L~~L~l~~n~~ 233 (710)
+.|++++|+++..-. ..+..+++|++|++++|.+
T Consensus 90 ~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i 124 (162)
T d1a9na_ 90 TELILTNNSLVELGDLDPLASLKSLTYLCILRNPV 124 (162)
T ss_dssp CEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGG
T ss_pred ccceeccccccccccccccccccccchhhcCCCcc
Confidence 999999998864211 2344444444444444443
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.43 E-value=2e-13 Score=119.46 Aligned_cols=101 Identities=17% Similarity=0.219 Sum_probs=79.7
Q ss_pred cEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCC
Q 005177 128 ISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGN 207 (710)
Q Consensus 128 ~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N 207 (710)
|+|||++|+++. +| .++++++|++||+++|.++ .+|+.++.+++|++|++++|+++. +| .+.++++|+.|++++|
T Consensus 1 R~L~Ls~n~l~~-l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLTV-LC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCSS-CC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCCC-Cc-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCC
Confidence 689999999984 45 4899999999999999998 578889999999999999999985 45 5899999999999999
Q ss_pred cCCCCC-cccccccccccccccccccc
Q 005177 208 LLNDQI-PAELGMLKTVTHMEIGYNFY 233 (710)
Q Consensus 208 ~l~~~~-p~~l~~l~~L~~L~l~~n~~ 233 (710)
+++... +..++.+++|+.+++++|.+
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i 102 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGNSL 102 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGG
T ss_pred ccCCCCCchhhcCCCCCCEEECCCCcC
Confidence 987432 13445555555555555544
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.41 E-value=6.4e-15 Score=153.79 Aligned_cols=135 Identities=18% Similarity=0.209 Sum_probs=75.5
Q ss_pred CccchhccccccCCcc----CchhccCCCCCcEEEccccccCCC-----CCccccCCCCCCEEEccCCCCCCC----CCc
Q 005177 245 SEVQYLDIAGANLSGS----IPKELSNLTKLESLFLFRNQLAGQ-----VPWEFSRVTTLKSLDLSDNRLSGP----IPE 311 (710)
Q Consensus 245 ~~L~~L~ls~n~l~g~----~p~~l~~l~~L~~L~L~~n~l~~~-----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~ 311 (710)
+.|+.+++++|+++.. +...+...+.|+.|++++|.++.. +...+...++|+.|+|++|.++.. +..
T Consensus 158 ~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~ 237 (344)
T d2ca6a1 158 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 237 (344)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred cccceeecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccc
Confidence 3455555555544311 222334456666666666665431 122345566677777777766432 334
Q ss_pred cccCCCCCCEEEcccccCcccCCc----ccC--CCCCCcEEeccCCCCCCC----CCcccC-CCCCCcEEECCCCcCCc
Q 005177 312 SFADLKNLRLLSLMYNEMSGTVPE----SLV--QLPSLEILFIWNNYFSGS----LPENLG-RNSKLRWVDVSTNNFNG 379 (710)
Q Consensus 312 ~~~~l~~L~~L~Ls~N~l~g~~p~----~~~--~l~~L~~L~L~~N~l~g~----~p~~l~-~~~~L~~L~ls~N~l~g 379 (710)
.+..+++|++|+|++|.+++.-.. .+. ..+.|++|++++|+++.. +...+. ++++|+.|++++|.+..
T Consensus 238 ~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 238 ALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp HGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred cccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCC
Confidence 456667777777777777643222 222 235677888888776532 222232 45678888888888753
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.40 E-value=1.2e-14 Score=151.64 Aligned_cols=236 Identities=17% Similarity=0.168 Sum_probs=143.9
Q ss_pred CCCCcEEECCCCcCccc----CCccccCCCCCcEEECcCCCCCCC---CC-------hhhcCCCCCCEEECCCCCCCcC-
Q 005177 100 FNELVDLNLSHNSFSGQ----FPVEIFNLTSLISLDISRNNFSGH---FP-------GGIQSLRNLLVLDAFSNSFSGS- 164 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~---~p-------~~l~~L~~L~~L~L~~N~l~~~- 164 (710)
.+.|+.|+|++|.+... +-..+...++|+.|+++++..... .| ..+...++|+.|||++|.++..
T Consensus 30 ~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~ 109 (344)
T d2ca6a1 30 DDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTA 109 (344)
T ss_dssp CSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTT
T ss_pred CCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccccccccccc
Confidence 66788888888877532 223455678888888887654321 11 2244567788888888877653
Q ss_pred ---CchhccCCCCCCEEEccCCCCCCCCCc-------------ccCCCCCCCeEEecCCcCCCCCccccccccccccccc
Q 005177 165 ---VPAEISQLEHLKVLNLAGSYFSGPIPS-------------QFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEI 228 (710)
Q Consensus 165 ---~p~~~~~L~~L~~L~L~~n~l~~~~p~-------------~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l 228 (710)
+...+...++|++|++++|.+...-.. .....+.|+.|.+++|.++..--.
T Consensus 110 ~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~------------- 176 (344)
T d2ca6a1 110 QEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMK------------- 176 (344)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHH-------------
T ss_pred ccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccc-------------
Confidence 334445677788888887776421000 012345666777766655421110
Q ss_pred ccccccccCCccccCCCccchhccccccCCcc-----CchhccCCCCCcEEEccccccCCC----CCccccCCCCCCEEE
Q 005177 229 GYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS-----IPKELSNLTKLESLFLFRNQLAGQ----VPWEFSRVTTLKSLD 299 (710)
Q Consensus 229 ~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~-----~p~~l~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~ 299 (710)
.+...+...+.|+.|++++|+++.. +...+..+++|+.|++++|.++.. +...+...++|++|+
T Consensus 177 -------~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~ 249 (344)
T d2ca6a1 177 -------EWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELG 249 (344)
T ss_dssp -------HHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEE
T ss_pred -------cccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhh
Confidence 1112233445666677777666521 223456677888888888877532 233456778888888
Q ss_pred ccCCCCCCCCCc----cccC--CCCCCEEEcccccCccc----CCcccC-CCCCCcEEeccCCCCCC
Q 005177 300 LSDNRLSGPIPE----SFAD--LKNLRLLSLMYNEMSGT----VPESLV-QLPSLEILFIWNNYFSG 355 (710)
Q Consensus 300 Ls~N~l~~~~p~----~~~~--l~~L~~L~Ls~N~l~g~----~p~~~~-~l~~L~~L~L~~N~l~g 355 (710)
|++|.+++.-.. .+.. .+.|+.|++++|+++.. +...+. .+++|+.|+|++|.+..
T Consensus 250 Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 250 LNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp CTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred hhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCC
Confidence 888887654222 2222 35788899999887643 223332 46789999999998864
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.22 E-value=5.3e-14 Score=134.17 Aligned_cols=106 Identities=23% Similarity=0.244 Sum_probs=56.6
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
+++|++|+|++|.++ .++ .+.++++|++|+|++|.++ .+|..+..+++|++|++++|.++. + +.+..+++|++|+
T Consensus 47 L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l-~~~~~l~~L~~L~ 121 (198)
T d1m9la_ 47 LKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-L-SGIEKLVNLRVLY 121 (198)
T ss_dssp TTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-H-HHHHHHHHSSEEE
T ss_pred ccccceeECcccCCC-Ccc-cccCCccccChhhcccccc-cccccccccccccccccccccccc-c-ccccccccccccc
Confidence 556666666666655 233 3555666666666666655 334444444556666666666553 2 2355555666666
Q ss_pred ccCCCCCCCCC-cccCCCCCCCeEEecCCcCC
Q 005177 180 LAGSYFSGPIP-SQFGSFKSLEFLHLAGNLLN 210 (710)
Q Consensus 180 L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~ 210 (710)
|++|+++.... ..+..+++|+.|++++|.+.
T Consensus 122 L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~ 153 (198)
T d1m9la_ 122 MSNNKITNWGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp ESEEECCCHHHHHHHTTTTTCSEEEECSSHHH
T ss_pred cccchhccccccccccCCCccceeecCCCccc
Confidence 66665543211 23555555555555555443
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.22 E-value=3e-11 Score=109.90 Aligned_cols=91 Identities=20% Similarity=0.105 Sum_probs=45.5
Q ss_pred CccccCCCCCcEEECcCC-CCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCC
Q 005177 118 PVEIFNLTSLISLDISRN-NFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSF 196 (710)
Q Consensus 118 p~~~~~l~~L~~L~Ls~N-~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l 196 (710)
|..+..+++|++|++++| .++...+..|.++++|+.|+|++|+|+...|..|..+++|++|+|++|+++...+..|. .
T Consensus 24 p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~-~ 102 (156)
T d2ifga3 24 LHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQ-G 102 (156)
T ss_dssp TTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTC-S
T ss_pred cccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCCcccChhhhc-c
Confidence 334444455555555433 24444444455555555555555555544455555555555555555555532222232 2
Q ss_pred CCCCeEEecCCcC
Q 005177 197 KSLEFLHLAGNLL 209 (710)
Q Consensus 197 ~~L~~L~L~~N~l 209 (710)
.+|+.|+|++|.+
T Consensus 103 ~~l~~L~L~~Np~ 115 (156)
T d2ifga3 103 LSLQELVLSGNPL 115 (156)
T ss_dssp CCCCEEECCSSCC
T ss_pred ccccccccCCCcc
Confidence 2455666665554
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.17 E-value=1.4e-13 Score=131.14 Aligned_cols=131 Identities=15% Similarity=0.199 Sum_probs=108.4
Q ss_pred cCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCC
Q 005177 116 QFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGS 195 (710)
Q Consensus 116 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~ 195 (710)
.+|.++..+++|++|+|++|+++. ++ .+.++++|++|+|++|.++ .+|..+..+++|++|++++|+++. + +.+..
T Consensus 39 ~l~~sl~~L~~L~~L~Ls~n~I~~-i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l-~~~~~ 113 (198)
T d1m9la_ 39 KMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-L-SGIEK 113 (198)
T ss_dssp CCHHHHHHTTTCCEEECSEEEESC-CC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-H-HHHHH
T ss_pred hhhhHHhcccccceeECcccCCCC-cc-cccCCccccChhhcccccc-cccccccccccccccccccccccc-c-ccccc
Confidence 456778999999999999999985 45 5899999999999999998 567767777889999999999985 3 34788
Q ss_pred CCCCCeEEecCCcCCCCCc-ccccccccccccccccccccccCCcc----------ccCCCccchhc
Q 005177 196 FKSLEFLHLAGNLLNDQIP-AELGMLKTVTHMEIGYNFYQGNIPWQ----------LGNMSEVQYLD 251 (710)
Q Consensus 196 l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~l~~n~~~g~~p~~----------l~~l~~L~~L~ 251 (710)
+++|+.|++++|+++..-. ..+..+++|+.|++++|.+....+.. +..+++|+.||
T Consensus 114 l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~vi~~lp~L~~LD 180 (198)
T d1m9la_ 114 LVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp HHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHHHHHCSSCCEES
T ss_pred cccccccccccchhccccccccccCCCccceeecCCCccccCcccccchhhHHHHHHHHCCCcCEeC
Confidence 9999999999999975322 46889999999999999876544432 56788898887
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.15 E-value=5.4e-11 Score=108.19 Aligned_cols=110 Identities=15% Similarity=0.054 Sum_probs=91.0
Q ss_pred CCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCC-CCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCe
Q 005177 123 NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS-FSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEF 201 (710)
Q Consensus 123 ~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~-l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 201 (710)
.+...+.++.+++++. ..|..+..+++|+.|++++|+ ++..-+..|.++++|+.|+|++|+++...|..|.++++|++
T Consensus 6 ~c~~~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~ 84 (156)
T d2ifga3 6 CPHGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSR 84 (156)
T ss_dssp CCSSSSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCE
T ss_pred CcCCCCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccc
Confidence 4455667889988887 467889999999999998764 88766788999999999999999999888889999999999
Q ss_pred EEecCCcCCCCCccccccccccccccccccccc
Q 005177 202 LHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQ 234 (710)
Q Consensus 202 L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~ 234 (710)
|+|++|+++ .+|.......+|+.|++++|.+.
T Consensus 85 L~Ls~N~l~-~l~~~~~~~~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 85 LNLSFNALE-SLSWKTVQGLSLQELVLSGNPLH 116 (156)
T ss_dssp EECCSSCCS-CCCSTTTCSCCCCEEECCSSCCC
T ss_pred eeccCCCCc-ccChhhhccccccccccCCCccc
Confidence 999999998 45555444446888888888663
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.28 E-value=1.6e-08 Score=92.13 Aligned_cols=71 Identities=25% Similarity=0.226 Sum_probs=37.7
Q ss_pred ChhhcCCCCCCEEECCCCCCCcC--CchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCC
Q 005177 142 PGGIQSLRNLLVLDAFSNSFSGS--VPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQ 212 (710)
Q Consensus 142 p~~l~~L~~L~~L~L~~N~l~~~--~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 212 (710)
+..+..+++|++|+|++|+++.. ++..+..+++|+.|+|++|.++...+-.+....+|+.|++++|.+...
T Consensus 58 ~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~ 130 (162)
T d1koha1 58 RIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDT 130 (162)
T ss_dssp HHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSS
T ss_pred HHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcC
Confidence 33334566666666666666542 234455566666666666666532221222334566666666665543
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.14 E-value=6.8e-08 Score=87.76 Aligned_cols=87 Identities=23% Similarity=0.227 Sum_probs=58.4
Q ss_pred CCccccCCCCCcEEECcCCCCCCC--CChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcc--
Q 005177 117 FPVEIFNLTSLISLDISRNNFSGH--FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQ-- 192 (710)
Q Consensus 117 ~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~-- 192 (710)
++..+..+++|++|+|++|+++.. ++..+..+++|+.|||++|.++..-+-.+....+|+.|++++|.++......
T Consensus 57 l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~ 136 (162)
T d1koha1 57 LRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQST 136 (162)
T ss_dssp HHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHH
T ss_pred hHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchh
Confidence 333445678888888888888753 2345677888888888888887543333444557888888888887654432
Q ss_pred -----cCCCCCCCeEE
Q 005177 193 -----FGSFKSLEFLH 203 (710)
Q Consensus 193 -----~~~l~~L~~L~ 203 (710)
+..+++|+.||
T Consensus 137 y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 137 YISAIRERFPKLLRLD 152 (162)
T ss_dssp HHHHHHTTSTTCCEET
T ss_pred HHHHHHHHCCCCCEEC
Confidence 45677777664
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=97.94 E-value=2.3e-05 Score=76.38 Aligned_cols=128 Identities=18% Similarity=0.071 Sum_probs=84.9
Q ss_pred CCccEEEEcCCCcEEEEEEeeccch-hHHHHHHHHHHHhccC-CCCceeEEEEEEcCCceeEEEeecCCCChhhhhhcCC
Q 005177 459 SAAGCKAVLPTGITVSVKKIEWGAT-RIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKR 536 (710)
Q Consensus 459 ~g~vy~~~~~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~~~l~~~~ 536 (710)
...||+... ++..+.||+...... ....+.+|...+..+. +--+-++++++.+++..++|||++++..+.+......
T Consensus 27 ~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~~~~~~ 105 (263)
T d1j7la_ 27 PAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYEDEQ 105 (263)
T ss_dssp SSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHTTTCS
T ss_pred CCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEecccccccccccccc
Confidence 357898875 555677888765322 2334667777766553 3234567788888888999999999877765443222
Q ss_pred CHHHHHHHHHHHHHHHHHHhcCC--------------------------------------------------------C
Q 005177 537 DWAAKYKIVLGVARGLCFLHHDC--------------------------------------------------------Y 560 (710)
Q Consensus 537 ~~~~~~~i~~~ia~gL~yLH~~~--------------------------------------------------------~ 560 (710)
. ...++.++++.++.||+.. .
T Consensus 106 ~---~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 182 (263)
T d1j7la_ 106 S---PEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEE 182 (263)
T ss_dssp C---HHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSHHHHHHHHHHSCCCCC
T ss_pred c---HHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchHHHHHHHHHHhcCCcCC
Confidence 2 2234445555555555421 1
Q ss_pred CCceecCCCCCCeEecCCCceEEcccCccc
Q 005177 561 PAIPHGDLKASNIVFDENMEPHLAEFGFKY 590 (710)
Q Consensus 561 ~~iiHrDlk~~NiLl~~~~~~kl~DfGla~ 590 (710)
+.++|+|+.|.||+++++..+-|.||+.+.
T Consensus 183 ~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T d1j7la_ 183 LVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp EEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred cEEEEeeccCcceeecCCceEEEeechhcc
Confidence 237899999999999987667799998654
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=97.75 E-value=1.9e-05 Score=76.56 Aligned_cols=74 Identities=18% Similarity=0.118 Sum_probs=51.7
Q ss_pred hcCCCC-CccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCC--CceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 454 AARPQS-AAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHK--NLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 454 ig~g~~-g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~--niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
+..|.. ..||+....+|..+.+|.-..+. ...+.+|.+.++.+... .+.++++++.+++..++||||+++-++.
T Consensus 18 ~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~--~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~ 94 (255)
T d1nd4a_ 18 QTIGCSDAAVFRLSAQGRPVLFVKTDLSGA--LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL 94 (255)
T ss_dssp CSCTTSSCEEEEEECTTSCCEEEEEECSCT--TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred cCCcccCCeEEEEEeCCCCEEEEEeCCccC--HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeeccccc
Confidence 344443 57899998888888999866442 23456667666655432 3556788888888899999999976554
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.46 E-value=2.7e-05 Score=70.34 Aligned_cols=87 Identities=14% Similarity=0.112 Sum_probs=53.2
Q ss_pred CCCCcEEECCCC-cCccc----CCccccCCCCCcEEECcCCCCCCC----CChhhcCCCCCCEEECCCCCCCcC----Cc
Q 005177 100 FNELVDLNLSHN-SFSGQ----FPVEIFNLTSLISLDISRNNFSGH----FPGGIQSLRNLLVLDAFSNSFSGS----VP 166 (710)
Q Consensus 100 l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~L~~L~~L~L~~N~l~~~----~p 166 (710)
-+.|+.|+|+++ .+... +-..+...+.|++|+|++|.+... +...+...+.|+.|+|++|.++.. +-
T Consensus 14 ~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~ 93 (167)
T d1pgva_ 14 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 93 (167)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHH
Confidence 356888888764 45422 222455667788888888877532 223344567778888887777642 22
Q ss_pred hhccCCCCCCEEEccCCCCC
Q 005177 167 AEISQLEHLKVLNLAGSYFS 186 (710)
Q Consensus 167 ~~~~~L~~L~~L~L~~n~l~ 186 (710)
..+...++|++|+|++|.+.
T Consensus 94 ~aL~~n~sL~~L~l~~n~~~ 113 (167)
T d1pgva_ 94 RSTLVTQSIVEFKADNQRQS 113 (167)
T ss_dssp HHTTTTCCCSEEECCCCSSC
T ss_pred HHHHhCCcCCEEECCCCcCC
Confidence 33455566777777776544
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.20 E-value=6.1e-05 Score=67.93 Aligned_cols=89 Identities=12% Similarity=0.101 Sum_probs=64.1
Q ss_pred cCCCCCcEEECcCC-CCCCC----CChhhcCCCCCCEEECCCCCCCc----CCchhccCCCCCCEEEccCCCCCCC----
Q 005177 122 FNLTSLISLDISRN-NFSGH----FPGGIQSLRNLLVLDAFSNSFSG----SVPAEISQLEHLKVLNLAGSYFSGP---- 188 (710)
Q Consensus 122 ~~l~~L~~L~Ls~N-~l~~~----~p~~l~~L~~L~~L~L~~N~l~~----~~p~~~~~L~~L~~L~L~~n~l~~~---- 188 (710)
.+.++|+.|+|+++ .++.. +-..+...+.|+.|+|++|.+.. .+...+...+.|++|+|++|.++..
T Consensus 12 ~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~ 91 (167)
T d1pgva_ 12 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 91 (167)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHH
Confidence 35688999999974 45432 22345677889999999999873 2334456678899999999988742
Q ss_pred CCcccCCCCCCCeEEecCCcCC
Q 005177 189 IPSQFGSFKSLEFLHLAGNLLN 210 (710)
Q Consensus 189 ~p~~~~~l~~L~~L~L~~N~l~ 210 (710)
+-..+...++|+.|++++|.+.
T Consensus 92 l~~aL~~n~sL~~L~l~~n~~~ 113 (167)
T d1pgva_ 92 LLRSTLVTQSIVEFKADNQRQS 113 (167)
T ss_dssp HHHHTTTTCCCSEEECCCCSSC
T ss_pred HHHHHHhCCcCCEEECCCCcCC
Confidence 2234566788999999988654
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=96.59 E-value=0.0024 Score=65.50 Aligned_cols=75 Identities=9% Similarity=-0.057 Sum_probs=46.0
Q ss_pred hhhhcCCCCCccEEEEcCC-CcEEEEEEeecc--------chhHHHHHHHHHHHhccC---CCCceeEEEEEEcCCceeE
Q 005177 451 CEEAARPQSAAGCKAVLPT-GITVSVKKIEWG--------ATRIKIVSEFITRIGTVR---HKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 451 ~~~ig~g~~g~vy~~~~~~-g~~vAvK~l~~~--------~~~~~~~~~e~~~l~~l~---H~niv~l~g~~~~~~~~~l 518 (710)
.+.+|.|..-.||+....+ |+.|.||.-... .........|.+.|..+. ...+.+++++ +++..++
T Consensus 31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l 108 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 108 (392)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence 4578889999999998755 678899964321 111233445666665442 2345555544 4556789
Q ss_pred EEeecCCCC
Q 005177 519 LYDYLPNGN 527 (710)
Q Consensus 519 v~Ey~~~gs 527 (710)
||||+++..
T Consensus 109 vmE~L~~~~ 117 (392)
T d2pula1 109 VMEDLSHLK 117 (392)
T ss_dssp EECCCTTSE
T ss_pred EEeccCCcc
Confidence 999998644
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.39 E-value=0.00032 Score=62.87 Aligned_cols=108 Identities=15% Similarity=0.086 Sum_probs=56.9
Q ss_pred CCCCcEEECCC-CcCccc----CCccccCCCCCcEEECcCCCCCCCCC----hhhcCCCCCCEEECCCCCCCcC----Cc
Q 005177 100 FNELVDLNLSH-NSFSGQ----FPVEIFNLTSLISLDISRNNFSGHFP----GGIQSLRNLLVLDAFSNSFSGS----VP 166 (710)
Q Consensus 100 l~~L~~L~Ls~-N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~l~~L~~L~~L~L~~N~l~~~----~p 166 (710)
-+.|++|+|++ +.++.. +-..+...++|++|+|++|.++...- ..+...++++.+++++|.++.. +-
T Consensus 16 ~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~ 95 (166)
T d1io0a_ 16 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 95 (166)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHH
Confidence 35677777776 345421 22234466777777777777653222 2234556777777777766532 22
Q ss_pred hhccCCCCCCEEEcc--CCCCCC----CCCcccCCCCCCCeEEecCC
Q 005177 167 AEISQLEHLKVLNLA--GSYFSG----PIPSQFGSFKSLEFLHLAGN 207 (710)
Q Consensus 167 ~~~~~L~~L~~L~L~--~n~l~~----~~p~~~~~l~~L~~L~L~~N 207 (710)
..+...++|+.++|+ .|.+.. .+...+...++|+.|+++.+
T Consensus 96 ~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~ 142 (166)
T d1io0a_ 96 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFT 142 (166)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCS
T ss_pred HHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCC
Confidence 344555666654443 344421 12222334455555555544
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=96.25 E-value=0.0057 Score=60.86 Aligned_cols=67 Identities=4% Similarity=-0.127 Sum_probs=45.1
Q ss_pred ccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCc-----eeEE--EEEEcCCceeEEEeecCCCC
Q 005177 461 AGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNL-----IRLL--GFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 461 ~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~ni-----v~l~--g~~~~~~~~~lv~Ey~~~gs 527 (710)
.||++...+|..+++|.-+.+....+.+.+|.+.+..+....+ +..- .....++..+.+++|++|..
T Consensus 37 ~vy~v~~~dg~~~VlK~~rp~~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~ 110 (325)
T d1zyla1 37 RVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQ 110 (325)
T ss_dssp EEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEE
T ss_pred eeEEEEcCCCCEEEEEEeCCCCCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcC
Confidence 6899999999999999987655456667778777765542222 1111 12233567789999998643
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=95.94 E-value=0.00056 Score=61.14 Aligned_cols=111 Identities=15% Similarity=0.177 Sum_probs=68.6
Q ss_pred ccCCCCCcEEECcC-CCCCCC----CChhhcCCCCCCEEECCCCCCCcC----CchhccCCCCCCEEEccCCCCCCC---
Q 005177 121 IFNLTSLISLDISR-NNFSGH----FPGGIQSLRNLLVLDAFSNSFSGS----VPAEISQLEHLKVLNLAGSYFSGP--- 188 (710)
Q Consensus 121 ~~~l~~L~~L~Ls~-N~l~~~----~p~~l~~L~~L~~L~L~~N~l~~~----~p~~~~~L~~L~~L~L~~n~l~~~--- 188 (710)
..+.++|++|+|++ +.++.. +-..+...++|+.|+|++|.++.. +-..+...++|+.+++++|.++..
T Consensus 13 ~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~ 92 (166)
T d1io0a_ 13 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 92 (166)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHH
Confidence 34678999999987 456432 223355788899999999988643 223455678899999998887532
Q ss_pred -CCcccCCCCCCCeEEec--CCcCCC----CCcccccccccccccccccc
Q 005177 189 -IPSQFGSFKSLEFLHLA--GNLLND----QIPAELGMLKTVTHMEIGYN 231 (710)
Q Consensus 189 -~p~~~~~l~~L~~L~L~--~N~l~~----~~p~~l~~l~~L~~L~l~~n 231 (710)
+-..+...++|+.++|+ +|.+.. .+...+...++|+.|+++.+
T Consensus 93 ~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~ 142 (166)
T d1io0a_ 93 ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFT 142 (166)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCS
T ss_pred HHHHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCC
Confidence 22345667778876654 455532 12223334445555555443
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=94.16 E-value=0.031 Score=56.86 Aligned_cols=71 Identities=14% Similarity=0.045 Sum_probs=42.1
Q ss_pred hhcCCCCCccEEEEcCCC--------cEEEEEEeeccchhHHHHHHHHHHHhccCCCCce-eEEEEEEcCCceeEEEeec
Q 005177 453 EAARPQSAAGCKAVLPTG--------ITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLI-RLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~~~g--------~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv-~l~g~~~~~~~~~lv~Ey~ 523 (710)
.++.|-.=.+|+...+++ ..|.++... +........+|.++++.+.-.+++ ++++++.+ .+||||+
T Consensus 49 ~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~efi 123 (395)
T d1nw1a_ 49 RIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-NPETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEYI 123 (395)
T ss_dssp EECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-SCCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECCC
T ss_pred EcCCccccceEEEEeCCCCccccCCCCcEEEEecC-CcchhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEEEEe
Confidence 455555667788876443 345555443 322233455677777766533444 67777642 6899999
Q ss_pred CCCCh
Q 005177 524 PNGNL 528 (710)
Q Consensus 524 ~~gsL 528 (710)
++-.+
T Consensus 124 ~g~~l 128 (395)
T d1nw1a_ 124 PSRPL 128 (395)
T ss_dssp CEEEC
T ss_pred ccccC
Confidence 87443
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=89.12 E-value=0.19 Score=48.77 Aligned_cols=30 Identities=27% Similarity=0.351 Sum_probs=26.4
Q ss_pred CCCceecCCCCCCeEecCCCceEEcccCcc
Q 005177 560 YPAIPHGDLKASNIVFDENMEPHLAEFGFK 589 (710)
Q Consensus 560 ~~~iiHrDlk~~NiLl~~~~~~kl~DfGla 589 (710)
..++||+|+.+.||+++.+...-|.||+.+
T Consensus 182 ~~giIHgDl~~dNvl~~~~~v~gvIDF~~~ 211 (316)
T d2ppqa1 182 PAGVIHADLFQDNVFFLGDELSGLIDFYFA 211 (316)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTC
T ss_pred ccccccCCcchhhhhcccccceeEeccccc
Confidence 347999999999999998877789999965
|