Citrus Sinensis ID: 005249

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700------
MNGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRGREDVSGEMALLVEGLGIGGETSIEEYIIGPGDELADGEEPTDEKDKIRLYGPEEGLSWVAKPVTGQSSLALVSRQGSLANQSVPLMDPLVTLFGSVHEKLPESGSMRSTLFPTFGSMFSTAEHHVKHDHWDEESLQREGEDHASDIAGADSDDNLHSPLISRQTTSMEKDMAAPPSHGSILSMRRHSSLMQGSGEAVGSTGIGGGWQLAWKWTEREGEDGKKEGGFKRIYLHQEGVPGSRRGSLVSVPGYDVPEEGEYIQAAALVSQPALYSKELMDQHPVGPAMVHPSETASKGPSWAALLEAGVKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVITEFFAVGARQATKAD
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHcccHHHHHHHHHHHHccccHHHHHHHHHHHHcccccccccccccccccccccccccccccEEEEEcccHHHHHHHEEccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccHHHHHHHHHHcccccccccccccEEEccccccHHHHHHHHHccccccccccHHHHHHccccHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHcccccccccc
cccEEEEEEEEHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHcccHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccHHHHHcccccHHHHHHHHHHHHHHHcccccEEEEEEEEEcccccccccHEEEEccHHccccccccHHHHHHHcHHHcccccccccccccccccccccccccccccccccHccccccccccccccccccccccccccccccccccccccccccccccccccccccccHccccccccccccHHHHHHHHHHHHHHcccccccccccEEEEEcHcHHHHHHHHHHHHHHHccccccHHHHHHcccHHHHHHHHHHHcccccccHHHHHHHHHHHccccHHHHHccccHHHHHHHHHHHHHHHHHcHcEEHHHHHHHHHHHcHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHccccccccc
MNGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATaittcsgpisdwlgrrpmlILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPlyisetapseirgrlntlpqftgsggMFLAYCMVFGMsllaspswrLMLGVLSIPALLYFAFAVfflpesprwlvskGKMLEAKQVLQRLRGREDVSGEMALLVEGlgiggetsieeyiigpgdeladgeeptdekdkirlygpeeglswvakpvtgqsSLALVSRqgslanqsvplmdpLVTLFGSvheklpesgsmrstlfptfgsmfstaehhvkhdhwdeeslqregedhasdiagadsddnlhsplisrqttsmekdmaappshgsilsmrrhsslmqgsgeavgstgigggWQLAWKWTeregedgkkeggfKRIYlhqegvpgsrrgslvsvpgydvpeegEYIQAAALVSqpalyskelmdqhpvgpamvhpsetaskgpSWAALLEAGVKRALLVGVGIQILQQFsgingvlyyTPQILEQAGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFvaaygpipnilcaeifptkVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLrvpetkgmplEVITEFFAVGARQATKAD
MNGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISetapseirgrlnTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQrlrgredvsgEMALLVEGLGIGGETSIEEYIIGPGDELADGEEPTDEKDKIRLYGPEEGLSWVAKPVTGQSSLALVSRQGSLANQSVPLMDPLVTLFGSVHEKLPESGSMRSTLFPTFGSMFSTAEHHVKHDHWDEESLQREGEDHASDiagadsddnlhSPLISRQTTSMEKDMAAPPSHGSILSMRRHSSLMQGSGEAVGSTGIGGGWQLAWKWTEREGEDGKKEGGFKRIYLhqegvpgsrrgslVSVPGYDVPEEGEYIQAAALVSQPALYSKELMDQHPVGPAMVHPSETASKGPSWAALLEAGVKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVITEFfavgarqatkad
MNGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPallyfafavfflPESPRWLVSKGKMLEAKQVLQRLRGREDVSGEMALLVEGLGIGGETSIEEYIIGPGDELADGEEPTDEKDKIRLYGPEEGLSWVAKPVTGQSSLALVSRQGSLANQSVPLMDPLVTLFGSVHEKLPESGSMRSTLFPTFGSMFSTAEHHVKHDHWDEESLQREGEDHASDIAGADSDDNLHSPLISRQTTSMEKDMAAPPSHGSILSMRRHSSLMQGSGEAVGSTGIGGGWQLAWKWTeregedgkkeggfkRIYLHQEGVPGSRRGSLVSVPGYDVPEEGEYIQAAALVSQPALYSKELMDQHPVGPAMVHPSETASKGPSWAALLEAGVKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVAMKLMDVAGRRKlllttipvlivsliilvisetlQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVITEFFAVGARQATKAD
****ALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRGREDVSGEMALLVEGLGIGGETSIEEYIIG*******************LYG**EGLSWVAKPVT****LAL***********VPLMDPLVTLFGSV*****************F************************************************************************************STGIGGGWQLAWKWTER*********GFKRIYLHQE*********LVSVPGYDVPEEGEYIQAAALVSQPALY*************************SWAALLEAGVKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVITEFFAVGA*******
*NGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRGREDVSGEMA******************IGPGDELADGEEPTDEKDKIRLYGPEEGLSWVAKPVTGQSSLALVSRQGSLANQSVPLMDPLVTLFGSVHEK*****SM*STLFPTFGS********************************************************************************VGSTGIGGGWQLAWKWTEREGEDGKKEGGFKRIYLHQEGVPGSRRGSLVSVPGYDVPEEGEYIQAAALVSQPALY*******************************EAGVKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVITE*************
MNGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRGREDVSGEMALLVEGLGIGGETSIEEYIIGPGDEL*********KDKIRLYGPEEGLSWVAKPVTGQSSLALVSRQGSLANQSVPLMDPLVTLFGSVHEKLPESGSMRSTLFPTFGSMFSTAEH******************HASDIAGADSDDNLHSPLISRQTTSMEKDMAAPPSHGSILSMRR*************STGIGGGWQLAWKWTEREGEDGKKEGGFKRIYLHQEGVPGSRRGSLVSVPGYDVPEEGEYIQAAALVSQPALYSKELMDQHPVGPAMVHPSETASKGPSWAALLEAGVKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVITEFFAVGARQATKAD
*NGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRGREDVSGEMALLVEGLGIGGETSIEEYIIGPGDELADGEEPTDEKDKIRLYGPEEGLSWVAKPVTGQSSLALVSRQGSLANQSVPLMDPLVTLFGSVHEKLPES*SMRST***************************************************************************RHSSLMQGSGEAVGSTGIGGGWQLAWKWTEREGEDGKKEGGFKRIYLHQEGVPGSRRGSLVSVPGYDVPEEGEYIQAAALVSQPALYSKELMDQHPVGPAMVHPSETASKGPSWAALLEAGVKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVITEFFAVG********
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MNGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRGREDVSGEMALLVEGLGIGGETSIEEYIIGPGDELADGEEPTDEKDKIRLYGPEEGLSWVAKPVTGQSSLALVSRQGSLANQSVPLMDPLVTLFGSVHEKLPESGSMRSTLFPTFGSMFSTAEHHVKHDHWDEESLQREGEDHASDIAGADSDDNLHSPLISRQTTSMEKDMAAPPSHGSILSMRRHSSLMQGSGEAVGSTGIGGGWQLAWKWTEREGEDGKKEGGFKRIYLHQEGVPGSRRGSLVSVPGYDVPEEGEYIQAAALVSQPALYSKELMDQHPVGPAMVHPSETASKGPSWAALLEAGVKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVITEFFAVGARQATKAD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query706 2.2.26 [Sep-21-2011]
Q8LPQ8729 Monosaccharide-sensing pr yes no 0.977 0.946 0.682 0.0
Q96290734 Monosaccharide-sensing pr no no 0.970 0.933 0.632 0.0
Q9SD00729 Monosaccharide-sensing pr no no 0.963 0.932 0.591 0.0
C0SPB2457 Putative metabolite trans yes no 0.284 0.439 0.372 1e-34
Q9C757580 Probable inositol transpo no no 0.313 0.381 0.382 4e-33
O52733457 D-xylose-proton symporter yes no 0.291 0.450 0.394 1e-32
Q96QE2648 Proton myo-inositol cotra yes no 0.294 0.320 0.360 1e-32
Q9ZQP6580 Probable inositol transpo no no 0.317 0.386 0.369 2e-32
P94493471 Putative metabolite trans no no 0.293 0.439 0.386 8e-32
O23492582 Inositol transporter 4 OS no no 0.318 0.386 0.357 4e-31
>sp|Q8LPQ8|MSSP2_ARATH Monosaccharide-sensing protein 2 OS=Arabidopsis thaliana GN=MSSP2 PE=2 SV=2 Back     alignment and function desciption
 Score =  950 bits (2456), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 506/741 (68%), Positives = 597/741 (80%), Gaps = 51/741 (6%)

Query: 1   MNGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGT--TVEGLVVAMSLIGATAIT 58
           M+GA LVAIAA +GN LQGWDNATIAGA++YIKK+ NL +  +VEGL+VAMSLIGAT IT
Sbjct: 1   MSGAVLVAIAAAVGNLLQGWDNATIAGAVLYIKKEFNLESNPSVEGLIVAMSLIGATLIT 60

Query: 59  TCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLY 118
           TCSG ++DWLGRRPMLILSS+LYFV  LVMLWSPNVYVL + RLLDGFGVGL VTLVP+Y
Sbjct: 61  TCSGGVADWLGRRPMLILSSILYFVGSLVMLWSPNVYVLLLGRLLDGFGVGLVVTLVPIY 120

Query: 119 ISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAF 178
           ISETAP EIRG LNTLPQFTGSGGMFL+YCMVFGMSL+ SPSWRLMLGVL IP+L++F  
Sbjct: 121 ISETAPPEIRGLLNTLPQFTGSGGMFLSYCMVFGMSLMPSPSWRLMLGVLFIPSLVFFFL 180

Query: 179 AVFFLPESPRWLVSKGKMLEAKQVLQRLRGREDVSGEMALLVEGLGIGGETSIEEYIIGP 238
            VFFLPESPRWLVSKG+MLEAK+VLQRLRGREDVSGEMALLVEGLGIGGET+IEEYIIGP
Sbjct: 181 TVFFLPESPRWLVSKGRMLEAKRVLQRLRGREDVSGEMALLVEGLGIGGETTIEEYIIGP 240

Query: 239 GDELADGEEPTDEKDKIRLYGPEEGLSWVAKPVTGQSSLALVSRQGS-LANQSVPLMDPL 297
            DE+ D  +   +KD+I+LYG EEGLSWVA+PV G S+++++SR GS ++ +   L+DPL
Sbjct: 241 ADEVTDDHDIAVDKDQIKLYGAEEGLSWVARPVKGGSTMSVLSRHGSTMSRRQGSLIDPL 300

Query: 298 VTLFGSVHEKLPESGSMRSTLFPTFGSMFSTAEHHVKHDHWDEESLQREGEDHASDIAGA 357
           VTLFGSVHEK+P++GSMRS LFP FGSMFS   +  +H+ WDEE+L  EGED+ SD  G 
Sbjct: 301 VTLFGSVHEKMPDTGSMRSALFPHFGSMFSVGGNQPRHEDWDEENLVGEGEDYPSD-HGD 359

Query: 358 DSDDNLHSPLISRQTTSMEKDMAAPPSHGSILSMRRHSSLMQGS-GEAVGSTGIGGGWQL 416
           DS+D+LHSPLISRQTTSMEKDM    +HG+ LS  RH S +QG+ GE  GS GIGGGWQ+
Sbjct: 360 DSEDDLHSPLISRQTTSMEKDMPH-TAHGT-LSTFRHGSQVQGAQGEGAGSMGIGGGWQV 417

Query: 417 AWKWTEREGEDGKKEGGFKRIYLHQEGVPGSRRGSLVSVPGYDVPEEGEYIQAAALVSQP 476
           AWKWTERE E G+KE          EG PGSRRGS+VS+PG D   E +++QA+ALVSQP
Sbjct: 418 AWKWTEREDESGQKE----------EGFPGSRRGSIVSLPGGDGTGEADFVQASALVSQP 467

Query: 477 ALYSKELMDQHPVGPAMVHPSETASKGPSWAALLEAGVKRALLVGVGIQILQQFSGINGV 536
           ALYSK+L+ +H +GPAMVHPSET +KG  W  L + GVKRAL+VGVG+QILQQFSGINGV
Sbjct: 468 ALYSKDLLKEHTIGPAMVHPSET-TKGSIWHDLHDPGVKRALVVGVGLQILQQFSGINGV 526

Query: 537 LYYTPQILEQAG--------------------------------VAMKLMDVAGRRKLLL 564
           LYYTPQILEQAG                                VAM+LMD++GRR LLL
Sbjct: 527 LYYTPQILEQAGVGILLSNMGISSSSASLLISALTTFVMLPAIAVAMRLMDLSGRRTLLL 586

Query: 565 TTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPT 624
           TTIP+LI SL++LVIS  + + S ++ A +ST  V++YFC FV  +GP PNILC+EIFPT
Sbjct: 587 TTIPILIASLLVLVISNLVHMNS-IVHAVLSTVSVVLYFCFFVMGFGPAPNILCSEIFPT 645

Query: 625 KVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETK 684
           +VRGICIAICA+ +WICDIIVTY+LPV+L SIGLAG FG+YA+VC ISWVFVF++VPETK
Sbjct: 646 RVRGICIAICALTFWICDIIVTYSLPVLLKSIGLAGVFGMYAIVCCISWVFVFIKVPETK 705

Query: 685 GMPLEVITEFFAVGARQATKA 705
           GMPLEVITEFF+VGARQA  A
Sbjct: 706 GMPLEVITEFFSVGARQAEAA 726

Arabidopsis thaliana (taxid: 3702)
>sp|Q96290|MSSP1_ARATH Monosaccharide-sensing protein 1 OS=Arabidopsis thaliana GN=MSSP1 PE=1 SV=2 Back     alignment and function description
>sp|Q9SD00|MSSP3_ARATH Monosaccharide-sensing protein 3 OS=Arabidopsis thaliana GN=MSSP3 PE=2 SV=1 Back     alignment and function description
>sp|C0SPB2|YWTG_BACSU Putative metabolite transport protein YwtG OS=Bacillus subtilis (strain 168) GN=ywtG PE=3 SV=1 Back     alignment and function description
>sp|Q9C757|INT2_ARATH Probable inositol transporter 2 OS=Arabidopsis thaliana GN=INT2 PE=1 SV=1 Back     alignment and function description
>sp|O52733|XYLT_LACBR D-xylose-proton symporter OS=Lactobacillus brevis GN=xylT PE=3 SV=1 Back     alignment and function description
>sp|Q96QE2|MYCT_HUMAN Proton myo-inositol cotransporter OS=Homo sapiens GN=SLC2A13 PE=1 SV=3 Back     alignment and function description
>sp|Q9ZQP6|INT3_ARATH Probable inositol transporter 3 OS=Arabidopsis thaliana GN=INT3 PE=2 SV=1 Back     alignment and function description
>sp|P94493|YNCC_BACSU Putative metabolite transport protein YncC OS=Bacillus subtilis (strain 168) GN=yncC PE=3 SV=2 Back     alignment and function description
>sp|O23492|INT4_ARATH Inositol transporter 4 OS=Arabidopsis thaliana GN=INT4 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query706
255539302739 sugar transporter, putative [Ricinus com 0.998 0.953 0.808 0.0
224061849738 predicted protein [Populus trichocarpa] 0.983 0.940 0.795 0.0
224086094738 predicted protein [Populus trichocarpa] 0.992 0.949 0.802 0.0
356508504738 PREDICTED: monosaccharide-sensing protei 0.990 0.947 0.775 0.0
356517193737 PREDICTED: monosaccharide-sensing protei 0.990 0.948 0.773 0.0
225457626740 PREDICTED: monosaccharide-sensing protei 0.995 0.95 0.784 0.0
147815142740 hypothetical protein VITISV_024656 [Viti 0.995 0.95 0.783 0.0
61613105740 hexose transporter 6 [Vitis vinifera] 0.995 0.95 0.778 0.0
357467167730 Monosaccharide-sensing protein [Medicago 0.981 0.949 0.746 0.0
255559173740 sugar transporter, putative [Ricinus com 0.994 0.948 0.741 0.0
>gi|255539302|ref|XP_002510716.1| sugar transporter, putative [Ricinus communis] gi|223551417|gb|EEF52903.1| sugar transporter, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1221 bits (3158), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 597/738 (80%), Positives = 646/738 (87%), Gaps = 33/738 (4%)

Query: 1   MNGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTC 60
           M GA LVAI A IG+FLQGWDNATIAGAIVYIKKDLNL TTVEGLVVAMSLIGAT ITTC
Sbjct: 1   MKGAVLVAITACIGSFLQGWDNATIAGAIVYIKKDLNLQTTVEGLVVAMSLIGATTITTC 60

Query: 61  SGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYIS 120
           SG ISDWLGRRPMLI+SS LYFVSGL+MLWSP+VYVLCIARLLDGF +GLAVTLVP+YIS
Sbjct: 61  SGAISDWLGRRPMLIISSTLYFVSGLIMLWSPDVYVLCIARLLDGFAIGLAVTLVPVYIS 120

Query: 121 ETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAV 180
           ETAPSEIRG LNTLPQFTGSGGMFL+YCMVFGMSL +SPSWRLMLGVLSIP+L+YFA  +
Sbjct: 121 ETAPSEIRGMLNTLPQFTGSGGMFLSYCMVFGMSLTSSPSWRLMLGVLSIPSLIYFALTI 180

Query: 181 FFLPESPRWLVSKGKMLEAKQVLQRLRGREDVSGEMALLVEGLGIGGETSIEEYIIGPGD 240
           F+LPESPRWLVSKGKMLEAK+VLQRLRGREDVSGEMALLVEGLGIGGETSIEEYIIGPGD
Sbjct: 181 FYLPESPRWLVSKGKMLEAKRVLQRLRGREDVSGEMALLVEGLGIGGETSIEEYIIGPGD 240

Query: 241 ELADGEEPTDEKDKIRLYGPEEGLSWVAKPVTGQSSLALVSRQGSLANQSVPLMDPLVTL 300
           EL D  EPT EKD+I+LYGPE GLSWVAKPVTGQSSLALVSR GS+ N+SVPLMDPLVTL
Sbjct: 241 ELPDDHEPTAEKDRIKLYGPEAGLSWVAKPVTGQSSLALVSRHGSMVNKSVPLMDPLVTL 300

Query: 301 FGSVHEKLPESGSMRSTLFPTFGSMFSTAEHHVKHDHWDEESLQREGEDHASDIAGADSD 360
           FGSVHEKLPE+GSMRS LFP FGSMFSTAE H KH+HWDEESLQREGE + S+ AG DSD
Sbjct: 301 FGSVHEKLPETGSMRSMLFPNFGSMFSTAEPHAKHEHWDEESLQREGEGYTSEAAGEDSD 360

Query: 361 DNLHSPLISRQTTSMEKDMAAPPSHGSILSMRRHSSLMQGSGEAVGSTGIGGGWQLAWKW 420
           DNLHSPLISRQTTSMEKDM  PPSHGSILSMRRHSSLMQG+GEAV STGIGGGWQLAWKW
Sbjct: 361 DNLHSPLISRQTTSMEKDMPPPPSHGSILSMRRHSSLMQGTGEAVSSTGIGGGWQLAWKW 420

Query: 421 TEREGEDGKKEGGFKRIYLHQEGVPGSRRGSLVSVPGYDVPEEGEYIQAAALVSQPALYS 480
           +EREGEDGKKEGGFKR+YLHQEG PGSRRGSLVS PG DVP EGEY+QAAALVSQPALYS
Sbjct: 421 SEREGEDGKKEGGFKRVYLHQEGAPGSRRGSLVSFPGGDVPAEGEYVQAAALVSQPALYS 480

Query: 481 KELMDQHPVGPAMVHPSETASKGPSWAALLEAGVKRALLVGVGIQILQQFSGINGVLYYT 540
           KEL+DQHPVGPAMVHP+ETA KGP WAALL+ GVKRAL+VG+GIQILQQFSGI G+LYYT
Sbjct: 481 KELLDQHPVGPAMVHPAETAKKGPIWAALLDPGVKRALIVGIGIQILQQFSGIGGILYYT 540

Query: 541 PQILEQAG--------------------------------VAMKLMDVAGRRKLLLTTIP 568
           PQILE+AG                                V M+LMDV+GRR LLLTTIP
Sbjct: 541 PQILEEAGVEVLLANLGIGTESASFLISAFTTFLMLPCIAVGMRLMDVSGRRALLLTTIP 600

Query: 569 VLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRG 628
           VLI SL+IL+I E++ L   V  A +STACV+IYFCCFV AYGPIPNILC+EIFPT+VRG
Sbjct: 601 VLIGSLVILIIGESIDL-GTVANAAVSTACVVIYFCCFVTAYGPIPNILCSEIFPTRVRG 659

Query: 629 ICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPL 688
           +CIAICA+ YWI DIIVTYTLPVML+SIGL G F ++AV+C ISWVFVFL+VPETKGMPL
Sbjct: 660 LCIAICALVYWIADIIVTYTLPVMLTSIGLEGIFIIFAVMCAISWVFVFLKVPETKGMPL 719

Query: 689 EVITEFFAVGARQATKAD 706
           EVITEFFAVGARQA  A 
Sbjct: 720 EVITEFFAVGARQADAAK 737

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224061849|ref|XP_002300629.1| predicted protein [Populus trichocarpa] gi|222842355|gb|EEE79902.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224086094|ref|XP_002307812.1| predicted protein [Populus trichocarpa] gi|222857261|gb|EEE94808.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356508504|ref|XP_003522996.1| PREDICTED: monosaccharide-sensing protein 2-like [Glycine max] Back     alignment and taxonomy information
>gi|356517193|ref|XP_003527273.1| PREDICTED: monosaccharide-sensing protein 2-like [Glycine max] Back     alignment and taxonomy information
>gi|225457626|ref|XP_002274415.1| PREDICTED: monosaccharide-sensing protein 2 [Vitis vinifera] gi|63334145|gb|AAY40466.1| putative hexose transporter [Vitis vinifera] gi|310877832|gb|ADP37147.1| putative tonoplastic monosaccharide transporter [Vitis vinifera] Back     alignment and taxonomy information
>gi|147815142|emb|CAN59780.1| hypothetical protein VITISV_024656 [Vitis vinifera] Back     alignment and taxonomy information
>gi|61613105|gb|AAX47312.1| hexose transporter 6 [Vitis vinifera] Back     alignment and taxonomy information
>gi|357467167|ref|XP_003603868.1| Monosaccharide-sensing protein [Medicago truncatula] gi|355492916|gb|AES74119.1| Monosaccharide-sensing protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|255559173|ref|XP_002520608.1| sugar transporter, putative [Ricinus communis] gi|223540207|gb|EEF41781.1| sugar transporter, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query706
TAIR|locus:2030377734 TMT1 "tonoplast monosaccharide 0.756 0.727 0.637 1.3e-224
TAIR|locus:2009832580 INT2 "inositol transporter 2" 0.313 0.381 0.356 5.7e-53
TAIR|locus:2130689582 INT4 "inositol transporter 4" 0.318 0.386 0.344 1.4e-49
TAIR|locus:2058774580 INT3 "nositol transporter 3" [ 0.318 0.387 0.361 5e-48
TAIR|locus:2058193509 INT1 "inositol transporter 1" 0.279 0.387 0.366 4.8e-45
UNIPROTKB|Q96QE2648 SLC2A13 "Proton myo-inositol c 0.294 0.320 0.336 2.9e-44
UNIPROTKB|E1BML6648 SLC2A13 "Uncharacterized prote 0.294 0.320 0.341 3.4e-44
UNIPROTKB|F1PGX9652 SLC2A13 "Uncharacterized prote 0.294 0.319 0.336 1.9e-43
MGI|MGI:2146030637 Slc2a13 "solute carrier family 0.294 0.326 0.344 2.2e-43
RGD|621814637 Slc2a13 "solute carrier family 0.294 0.326 0.344 2.7e-43
TAIR|locus:2030377 TMT1 "tonoplast monosaccharide transporter1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1687 (598.9 bits), Expect = 1.3e-224, Sum P(2) = 1.3e-224
 Identities = 360/565 (63%), Positives = 422/565 (74%)

Query:     1 MNGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTC 60
             M GA LVA+AATIGNFLQGWDNATIAGA+VYI KDLNL T+V+GLVVAMSLIGAT ITTC
Sbjct:     1 MKGATLVALAATIGNFLQGWDNATIAGAMVYINKDLNLPTSVQGLVVAMSLIGATVITTC 60

Query:    61 SGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYIS 120
             SGPISDWLGRRPMLILSSV+YFV GL+MLWSPNVYVLC ARLL+GFG GLAVTLVP+YIS
Sbjct:    61 SGPISDWLGRRPMLILSSVMYFVCGLIMLWSPNVYVLCFARLLNGFGAGLAVTLVPVYIS 120

Query:   121 ETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPXXXXXXXXX 180
             ETAP EIRG+LNTLPQF GSGGMFL+YCMVF MSL  SPSWR MLGVLSIP         
Sbjct:   121 ETAPPEIRGQLNTLPQFLGSGGMFLSYCMVFTMSLSDSPSWRAMLGVLSIPSLLYLFLTV 180

Query:   181 XXXPESPRWLVSKGKMLEAKQVLQRLRGREDVSGEMALLVEGLGIGGETSIEEYIIGPGD 240
                PESPRWLVSKG+M EAK+VLQ+L GREDV+ EMALLVEGL IGGE ++E+ ++   D
Sbjct:   181 FYLPESPRWLVSKGRMDEAKRVLQQLCGREDVTDEMALLVEGLDIGGEKTMEDLLVTLED 240

Query:   241 ELADGE-EPTDEKDKIRLYGPEEGLSWVAKPVTGQ-SSLALVSRQGSLANQSVPLMDPLV 298
                D   E  DE  ++RLYG  E  S++A+PV  Q SSL L SR GSLANQS+ L DPLV
Sbjct:   241 HEGDDTLETVDEDGQMRLYGTHENQSYLARPVPEQNSSLGLRSRHGSLANQSMILKDPLV 300

Query:   299 TLFGSVHEKLPESG-SMRSTLFPTFGSMFSTAEH--HVKHDHWD---EESLQREGEDHAS 352
              LFGS+HEK+PE+G + RS +FP FGSMFST     H K  HW+   E    ++ +D+A+
Sbjct:   301 NLFGSLHEKMPEAGGNTRSGIFPHFGSMFSTTADAPHGKPAHWEKDIESHYNKDNDDYAT 360

Query:   353 DIAGADSDDN---LHSPLISRQTTSMEKDMAAPPSHGSILSMRRHSSLMQGSGEAVGSTG 409
             D    D DD+   L SPL+SRQTTSM+KDM   P+ GS LSMRRHS+LMQG+GE+  S G
Sbjct:   361 DDGAGDDDDSDNDLRSPLMSRQTTSMDKDMIPHPTSGSTLSMRRHSTLMQGNGES--SMG 418

Query:   410 IGGGWQLAWKWTXXXXXXXXXXXXXXRIYLHQEGVPGSRRGSLVSVPGYDVPEEG-EYIQ 468
             IGGGW + +++               R YL ++G   SRRGS++S+PG   P+ G  YI 
Sbjct:   419 IGGGWHMGYRYENDEYK---------RYYLKEDGAE-SRRGSIISIPGG--PDGGGSYIH 466

Query:   469 AAALVSQPALYSKELMDQHPVGPAMVHPSETASKGPSWAALLEAGVKRALLVGVGIQILQ 528
             A+ALVS+  L  K +   H  G AMV P + A+ GP W+ALLE GVKRAL+VGVGIQILQ
Sbjct:   467 ASALVSRSVLGPKSV---H--GSAMVPPEKIAASGPLWSALLEPGVKRALVVGVGIQILQ 521

Query:   529 QFSGINGVLYYTPQILEQAGVAMKL 553
             QFSGINGVLYYTPQILE+AGV + L
Sbjct:   522 QFSGINGVLYYTPQILERAGVDILL 546
GO:0005215 "transporter activity" evidence=IEA
GO:0005337 "nucleoside transmembrane transporter activity" evidence=ISS
GO:0005351 "sugar:hydrogen symporter activity" evidence=ISS
GO:0006810 "transport" evidence=IEA
GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS
GO:0016020 "membrane" evidence=IEA;ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0022857 "transmembrane transporter activity" evidence=IEA
GO:0022891 "substrate-specific transmembrane transporter activity" evidence=IEA
GO:0055085 "transmembrane transport" evidence=IEA
GO:0005773 "vacuole" evidence=IDA
GO:0009624 "response to nematode" evidence=IEP
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0009705 "plant-type vacuole membrane" evidence=IDA
GO:0006816 "calcium ion transport" evidence=RCA
GO:0007030 "Golgi organization" evidence=RCA
GO:0009651 "response to salt stress" evidence=RCA
GO:0009744 "response to sucrose stimulus" evidence=RCA
GO:0009749 "response to glucose stimulus" evidence=RCA
GO:0009750 "response to fructose stimulus" evidence=RCA
TAIR|locus:2009832 INT2 "inositol transporter 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2130689 INT4 "inositol transporter 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2058774 INT3 "nositol transporter 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2058193 INT1 "inositol transporter 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q96QE2 SLC2A13 "Proton myo-inositol cotransporter" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E1BML6 SLC2A13 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1PGX9 SLC2A13 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:2146030 Slc2a13 "solute carrier family 2 (facilitated glucose transporter), member 13" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|621814 Slc2a13 "solute carrier family 2 (facilitated glucose transporter), member 13" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8LPQ8MSSP2_ARATHNo assigned EC number0.68280.97730.9465yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query706
pfam00083449 pfam00083, Sugar_tr, Sugar (and other) transporter 1e-48
TIGR00879481 TIGR00879, SP, MFS transporter, sugar porter (SP) 6e-43
pfam00083449 pfam00083, Sugar_tr, Sugar (and other) transporter 2e-36
PRK10077479 PRK10077, xylE, D-xylose transporter XylE; Provisi 3e-36
TIGR00879481 TIGR00879, SP, MFS transporter, sugar porter (SP) 7e-33
cd06174352 cd06174, MFS, The Major Facilitator Superfamily (M 6e-25
PRK10077479 PRK10077, xylE, D-xylose transporter XylE; Provisi 2e-24
TIGR00898505 TIGR00898, 2A0119, cation transport protein 1e-23
pfam07690346 pfam07690, MFS_1, Major Facilitator Superfamily 2e-18
TIGR00895398 TIGR00895, 2A0115, benzoate transport 6e-14
TIGR00880141 TIGR00880, 2_A_01_02, Multidrug resistance protein 1e-11
TIGR01299742 TIGR01299, synapt_SV2, synaptic vesicle protein SV 2e-11
cd06174352 cd06174, MFS, The Major Facilitator Superfamily (M 3e-10
TIGR00883394 TIGR00883, 2A0106, metabolite-proton symporter 4e-09
cd06174352 cd06174, MFS, The Major Facilitator Superfamily (M 1e-08
PRK03893496 PRK03893, PRK03893, putative sialic acid transport 2e-08
TIGR00710385 TIGR00710, efflux_Bcr_CflA, drug resistance transp 5e-08
TIGR00891405 TIGR00891, 2A0112, putative sialic acid transporte 6e-08
COG0477338 COG0477, ProP, Permeases of the major facilitator 3e-07
pfam07690346 pfam07690, MFS_1, Major Facilitator Superfamily 2e-06
PRK11043401 PRK11043, PRK11043, putative transporter; Provisio 3e-05
TIGR00893399 TIGR00893, 2A0114, D-galactonate transporter 4e-05
PRK15403413 PRK15403, PRK15403, multidrug efflux system protei 8e-05
pfam00083449 pfam00083, Sugar_tr, Sugar (and other) transporter 1e-04
COG2211467 COG2211, MelB, Na+/melibiose symporter and related 1e-04
PRK12307426 PRK12307, PRK12307, putative sialic acid transport 1e-04
PRK15402406 PRK15402, PRK15402, multidrug efflux system transl 3e-04
pfam13347425 pfam13347, MFS_2, MFS/sugar transport protein 3e-04
COG2814394 COG2814, AraJ, Arabinose efflux permease [Carbohyd 5e-04
cd06174 352 cd06174, MFS, The Major Facilitator Superfamily (M 0.002
PRK11652394 PRK11652, emrD, multidrug resistance protein D; Pr 0.002
TIGR00711485 TIGR00711, efflux_EmrB, drug resistance transporte 0.002
PRK05122399 PRK05122, PRK05122, major facilitator superfamily 0.003
TIGR00898505 TIGR00898, 2A0119, cation transport protein 0.004
>gnl|CDD|215702 pfam00083, Sugar_tr, Sugar (and other) transporter Back     alignment and domain information 
 Score =  177 bits (450), Expect = 1e-48
 Identities = 78/225 (34%), Positives = 124/225 (55%), Gaps = 15/225 (6%)

Query: 7   VAIAATIGNFLQGWDNATIAGAIVYIK-----------KDLNLGTTVEGLVVAMSLIGAT 55
           +A+ A +G FL G+D   I   +  IK                 T + GL+V++  +G  
Sbjct: 1   LALVAALGGFLFGYDTGVIGAFLTLIKFFKRFGALTSIGACAASTVLSGLIVSIFSVGCL 60

Query: 56  AITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSP--NVYVLCIARLLDGFGVGLAVT 113
             +  +G + D  GR+  L++ +VL+ +  L+  ++   + Y+L + R++ G GVG    
Sbjct: 61  IGSLFAGKLGDRFGRKKSLLIGNVLFVIGALLQGFAKGKSFYMLIVGRVIVGLGVGGISV 120

Query: 114 LVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSL-LASPSWRLMLGVLSIPA 172
           LVP+YISE AP ++RG L +L Q   + G+ +A  +  G++    S  WR+ LG+  +PA
Sbjct: 121 LVPMYISEIAPKKLRGALGSLYQLGITFGILVAAIIGLGLNKYSNSDGWRIPLGLQFVPA 180

Query: 173 LLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRGREDVSGEMA 217
           +L     + FLPESPRWLV KGK+ EA+ VL +LRG  DV  E+ 
Sbjct: 181 ILLLIG-LLFLPESPRWLVLKGKLEEARAVLAKLRGVSDVDQEIQ 224

Length = 449
>gnl|CDD|233165 TIGR00879, SP, MFS transporter, sugar porter (SP) family Back     alignment and domain information
>gnl|CDD|215702 pfam00083, Sugar_tr, Sugar (and other) transporter Back     alignment and domain information
>gnl|CDD|182225 PRK10077, xylE, D-xylose transporter XylE; Provisional Back     alignment and domain information
>gnl|CDD|233165 TIGR00879, SP, MFS transporter, sugar porter (SP) family Back     alignment and domain information
>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>gnl|CDD|182225 PRK10077, xylE, D-xylose transporter XylE; Provisional Back     alignment and domain information
>gnl|CDD|233176 TIGR00898, 2A0119, cation transport protein Back     alignment and domain information
>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily Back     alignment and domain information
>gnl|CDD|233175 TIGR00895, 2A0115, benzoate transport Back     alignment and domain information
>gnl|CDD|233166 TIGR00880, 2_A_01_02, Multidrug resistance protein Back     alignment and domain information
>gnl|CDD|130366 TIGR01299, synapt_SV2, synaptic vesicle protein SV2 Back     alignment and domain information
>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>gnl|CDD|233168 TIGR00883, 2A0106, metabolite-proton symporter Back     alignment and domain information
>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>gnl|CDD|179668 PRK03893, PRK03893, putative sialic acid transporter; Provisional Back     alignment and domain information
>gnl|CDD|233099 TIGR00710, efflux_Bcr_CflA, drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>gnl|CDD|233172 TIGR00891, 2A0112, putative sialic acid transporter Back     alignment and domain information
>gnl|CDD|223553 COG0477, ProP, Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] Back     alignment and domain information
>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily Back     alignment and domain information
>gnl|CDD|182924 PRK11043, PRK11043, putative transporter; Provisional Back     alignment and domain information
>gnl|CDD|233174 TIGR00893, 2A0114, D-galactonate transporter Back     alignment and domain information
>gnl|CDD|237958 PRK15403, PRK15403, multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>gnl|CDD|215702 pfam00083, Sugar_tr, Sugar (and other) transporter Back     alignment and domain information
>gnl|CDD|225121 COG2211, MelB, Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|237051 PRK12307, PRK12307, putative sialic acid transporter; Provisional Back     alignment and domain information
>gnl|CDD|185300 PRK15402, PRK15402, multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>gnl|CDD|222060 pfam13347, MFS_2, MFS/sugar transport protein Back     alignment and domain information
>gnl|CDD|225371 COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>gnl|CDD|183259 PRK11652, emrD, multidrug resistance protein D; Provisional Back     alignment and domain information
>gnl|CDD|129794 TIGR00711, efflux_EmrB, drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>gnl|CDD|235348 PRK05122, PRK05122, major facilitator superfamily transporter; Provisional Back     alignment and domain information
>gnl|CDD|233176 TIGR00898, 2A0119, cation transport protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 706
KOG0569485 consensus Permease of the major facilitator superf 100.0
KOG0254513 consensus Predicted transporter (major facilitator 100.0
TIGR00887502 2A0109 phosphate:H+ symporter. This model represen 100.0
PRK10077479 xylE D-xylose transporter XylE; Provisional 100.0
TIGR01299742 synapt_SV2 synaptic vesicle protein SV2. This mode 100.0
PF00083451 Sugar_tr: Sugar (and other) transporter; InterPro: 100.0
TIGR00879481 SP MFS transporter, sugar porter (SP) family. This 100.0
TIGR00898505 2A0119 cation transport protein. 100.0
PRK10642490 proline/glycine betaine transporter; Provisional 100.0
TIGR02332412 HpaX 4-hydroxyphenylacetate permease. This protein 99.98
PRK11551406 putative 3-hydroxyphenylpropionic transporter MhpT 99.98
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 99.97
PRK11663434 regulatory protein UhpC; Provisional 99.97
PRK10406432 alpha-ketoglutarate transporter; Provisional 99.97
PRK12307426 putative sialic acid transporter; Provisional 99.97
TIGR00891405 2A0112 putative sialic acid transporter. 99.97
KOG0253528 consensus Synaptic vesicle transporter SV2 (major 99.97
TIGR00903368 2A0129 major facilitator 4 family protein. This fa 99.97
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 99.97
PRK03545390 putative arabinose transporter; Provisional 99.97
TIGR00893399 2A0114 d-galactonate transporter. 99.97
PRK09952438 shikimate transporter; Provisional 99.96
COG2271448 UhpC Sugar phosphate permease [Carbohydrate transp 99.96
PRK11273452 glpT sn-glycerol-3-phosphate transporter; Provisio 99.96
PRK03893496 putative sialic acid transporter; Provisional 99.96
KOG0252538 consensus Inorganic phosphate transporter [Inorgan 99.96
TIGR00895398 2A0115 benzoate transport. 99.96
PRK14995495 methyl viologen resistance protein SmvA; Provision 99.96
COG2814394 AraJ Arabinose efflux permease [Carbohydrate trans 99.96
PRK09705393 cynX putative cyanate transporter; Provisional 99.96
PRK15075434 citrate-proton symporter; Provisional 99.96
PRK10091382 MFS transport protein AraJ; Provisional 99.95
PRK05122399 major facilitator superfamily transporter; Provisi 99.95
TIGR00712438 glpT glycerol-3-phosphate transporter. This model 99.95
KOG0255521 consensus Synaptic vesicle transporter SVOP and re 99.95
TIGR00894465 2A0114euk Na(+)-dependent inorganic phosphate cotr 99.95
TIGR00881379 2A0104 phosphoglycerate transporter family protein 99.95
PRK12382392 putative transporter; Provisional 99.95
PLN00028476 nitrate transmembrane transporter; Provisional 99.94
PRK03699394 putative transporter; Provisional 99.94
PRK10489417 enterobactin exporter EntS; Provisional 99.94
PRK15402406 multidrug efflux system translocase MdfA; Provisio 99.94
TIGR00710385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 99.94
PRK10213394 nepI ribonucleoside transporter; Reviewed 99.94
PRK03633381 putative MFS family transporter protein; Provision 99.94
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 99.94
PRK15034462 nitrate/nitrite transport protein NarU; Provisiona 99.94
PRK09874408 drug efflux system protein MdtG; Provisional 99.94
PRK10504471 putative transporter; Provisional 99.94
TIGR00900365 2A0121 H+ Antiporter protein. 99.94
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 99.94
TIGR00711485 efflux_EmrB drug resistance transporter, EmrB/QacA 99.94
TIGR00892455 2A0113 monocarboxylate transporter 1. 99.93
TIGR00897402 2A0118 polyol permease family. This family of prot 99.93
PF07690352 MFS_1: Major Facilitator Superfamily; InterPro: IP 99.93
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 99.93
PRK10473392 multidrug efflux system protein MdtL; Provisional 99.92
PRK10054395 putative transporter; Provisional 99.92
PRK11102377 bicyclomycin/multidrug efflux system; Provisional 99.92
PRK11043401 putative transporter; Provisional 99.92
PRK11646400 multidrug resistance protein MdtH; Provisional 99.91
PRK15011393 sugar efflux transporter B; Provisional 99.91
TIGR00885410 fucP L-fucose:H+ symporter permease. This family d 99.91
PRK15403413 multidrug efflux system protein MdtM; Provisional 99.91
PRK11652394 emrD multidrug resistance protein D; Provisional 99.91
PRK10133438 L-fucose transporter; Provisional 99.9
KOG2532466 consensus Permease of the major facilitator superf 99.9
TIGR00886366 2A0108 nitrite extrusion protein (nitrite facilita 99.9
COG2223417 NarK Nitrate/nitrite transporter [Inorganic ion tr 99.9
KOG1330493 consensus Sugar transporter/spinster transmembrane 99.9
KOG2533495 consensus Permease of the major facilitator superf 99.89
PRK11010491 ampG muropeptide transporter; Validated 99.89
TIGR00896355 CynX cyanate transporter. This family of proteins 99.89
PRK11195393 lysophospholipid transporter LplT; Provisional 99.89
TIGR00902382 2A0127 phenyl proprionate permease family protein. 99.88
PRK09528420 lacY galactoside permease; Reviewed 99.87
TIGR00889418 2A0110 nucleoside transporter. This family of prot 99.87
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 99.87
PRK11902402 ampG muropeptide transporter; Reviewed 99.87
PRK11128382 putative 3-phenylpropionic acid transporter; Provi 99.86
PTZ00207591 hypothetical protein; Provisional 99.86
TIGR00882396 2A0105 oligosaccharide:H+ symporter. 99.86
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 99.86
TIGR00901356 2A0125 AmpG-related permease. 99.84
KOG2504509 consensus Monocarboxylate transporter [Carbohydrat 99.84
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 99.84
TIGR00924475 yjdL_sub1_fam amino acid/peptide transporter (Pept 99.83
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 99.82
PRK10207489 dipeptide/tripeptide permease B; Provisional 99.81
TIGR00806511 rfc RFC reduced folate carrier. Proteins of the RF 99.8
COG0738422 FucP Fucose permease [Carbohydrate transport and m 99.78
TIGR01301477 GPH_sucrose GPH family sucrose/H+ symporter. This 99.78
PF05977524 MFS_3: Transmembrane secretion effector; InterPro: 99.77
PRK09584500 tppB putative tripeptide transporter permease; Rev 99.76
PF06609599 TRI12: Fungal trichothecene efflux pump (TRI12); I 99.76
PRK09669444 putative symporter YagG; Provisional 99.75
TIGR00805633 oat sodium-independent organic anion transporter. 99.72
PF03825400 Nuc_H_symport: Nucleoside H+ symporter 99.72
KOG3764464 consensus Vesicular amine transporter [Intracellul 99.71
PRK10429473 melibiose:sodium symporter; Provisional 99.71
COG2807395 CynX Cyanate permease [Inorganic ion transport and 99.7
PF13347428 MFS_2: MFS/sugar transport protein 99.65
KOG2615451 consensus Permease of the major facilitator superf 99.64
TIGR00788468 fbt folate/biopterin transporter. The only functio 99.64
PRK09848448 glucuronide transporter; Provisional 99.63
PRK15462493 dipeptide/tripeptide permease D; Provisional 99.63
PF01306412 LacY_symp: LacY proton/sugar symporter; InterPro: 99.63
PRK11462460 putative transporter; Provisional 99.62
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 99.61
PRK10642490 proline/glycine betaine transporter; Provisional 99.58
KOG2563480 consensus Permease of the major facilitator superf 99.58
KOG4686459 consensus Predicted sugar transporter [Carbohydrat 99.49
TIGR00880141 2_A_01_02 Multidrug resistance protein. 99.47
COG2211467 MelB Na+/melibiose symporter and related transport 99.46
TIGR01299742 synapt_SV2 synaptic vesicle protein SV2. This mode 99.37
TIGR00889418 2A0110 nucleoside transporter. This family of prot 99.36
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 99.36
PRK09528420 lacY galactoside permease; Reviewed 99.34
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 99.33
TIGR01272310 gluP glucose/galactose transporter. Disruption of 99.33
COG2270438 Permeases of the major facilitator superfamily [Ge 99.31
PRK05122399 major facilitator superfamily transporter; Provisi 99.31
PRK10077479 xylE D-xylose transporter XylE; Provisional 99.29
TIGR00879481 SP MFS transporter, sugar porter (SP) family. This 99.28
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 99.27
PRK11551406 putative 3-hydroxyphenylpropionic transporter MhpT 99.27
PRK12382392 putative transporter; Provisional 99.27
PRK15011393 sugar efflux transporter B; Provisional 99.27
COG3104498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 99.24
PRK09874408 drug efflux system protein MdtG; Provisional 99.22
PRK10489417 enterobactin exporter EntS; Provisional 99.22
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 99.21
PRK03545390 putative arabinose transporter; Provisional 99.2
PRK09952438 shikimate transporter; Provisional 99.18
TIGR00902382 2A0127 phenyl proprionate permease family protein. 99.16
PRK03633381 putative MFS family transporter protein; Provision 99.15
TIGR00893399 2A0114 d-galactonate transporter. 99.15
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 99.14
PRK03699394 putative transporter; Provisional 99.13
TIGR00897402 2A0118 polyol permease family. This family of prot 99.12
KOG2325488 consensus Predicted transporter/transmembrane prot 99.12
PRK11273452 glpT sn-glycerol-3-phosphate transporter; Provisio 99.11
TIGR00892455 2A0113 monocarboxylate transporter 1. 99.1
PRK03893496 putative sialic acid transporter; Provisional 99.1
TIGR00891405 2A0112 putative sialic acid transporter. 99.09
TIGR00887502 2A0109 phosphate:H+ symporter. This model represen 99.08
PRK09705393 cynX putative cyanate transporter; Provisional 99.07
TIGR00895398 2A0115 benzoate transport. 99.07
TIGR00710 385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 99.05
PRK12307426 putative sialic acid transporter; Provisional 99.05
PRK15075434 citrate-proton symporter; Provisional 99.04
PRK10473 392 multidrug efflux system protein MdtL; Provisional 99.04
PRK11663434 regulatory protein UhpC; Provisional 99.03
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 99.02
TIGR00900365 2A0121 H+ Antiporter protein. 99.02
TIGR00711 485 efflux_EmrB drug resistance transporter, EmrB/QacA 99.0
PRK10406432 alpha-ketoglutarate transporter; Provisional 99.0
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 99.0
PRK11128382 putative 3-phenylpropionic acid transporter; Provi 98.99
TIGR02332 412 HpaX 4-hydroxyphenylacetate permease. This protein 98.99
TIGR00882396 2A0105 oligosaccharide:H+ symporter. 98.99
PF03092433 BT1: BT1 family; InterPro: IPR004324 Members of th 98.97
TIGR00880141 2_A_01_02 Multidrug resistance protein. 98.96
KOG3626735 consensus Organic anion transporter [Secondary met 98.96
PRK10504471 putative transporter; Provisional 98.95
TIGR00898505 2A0119 cation transport protein. 98.94
PRK14995 495 methyl viologen resistance protein SmvA; Provision 98.92
PF05977524 MFS_3: Transmembrane secretion effector; InterPro: 98.92
PRK11010491 ampG muropeptide transporter; Validated 98.92
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 98.9
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 98.9
PF03209403 PUCC: PUCC protein; InterPro: IPR004896 This prote 98.89
PRK15403 413 multidrug efflux system protein MdtM; Provisional 98.89
PRK15402406 multidrug efflux system translocase MdfA; Provisio 98.89
PF06813250 Nodulin-like: Nodulin-like; InterPro: IPR010658 Th 98.89
TIGR00901356 2A0125 AmpG-related permease. 98.88
KOG2816463 consensus Predicted transporter ADD1 (major facili 98.88
KOG0569485 consensus Permease of the major facilitator superf 98.88
TIGR00712438 glpT glycerol-3-phosphate transporter. This model 98.88
PLN00028476 nitrate transmembrane transporter; Provisional 98.86
PF03137539 OATP: Organic Anion Transporter Polypeptide (OATP) 98.85
COG0477338 ProP Permeases of the major facilitator superfamil 98.85
COG2814394 AraJ Arabinose efflux permease [Carbohydrate trans 98.84
PRK10054395 putative transporter; Provisional 98.84
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 98.83
PRK09848448 glucuronide transporter; Provisional 98.82
PRK11652 394 emrD multidrug resistance protein D; Provisional 98.81
PRK11102 377 bicyclomycin/multidrug efflux system; Provisional 98.8
PRK11195393 lysophospholipid transporter LplT; Provisional 98.8
PRK10213394 nepI ribonucleoside transporter; Reviewed 98.78
PRK10091382 MFS transport protein AraJ; Provisional 98.78
PF01770412 Folate_carrier: Reduced folate carrier; InterPro: 98.77
TIGR00881379 2A0104 phosphoglycerate transporter family protein 98.77
TIGR00886 366 2A0108 nitrite extrusion protein (nitrite facilita 98.75
COG2270438 Permeases of the major facilitator superfamily [Ge 98.75
PF07690352 MFS_1: Major Facilitator Superfamily; InterPro: IP 98.71
PRK11646400 multidrug resistance protein MdtH; Provisional 98.71
PF01306412 LacY_symp: LacY proton/sugar symporter; InterPro: 98.7
PRK11902402 ampG muropeptide transporter; Reviewed 98.7
PF05631354 DUF791: Protein of unknown function (DUF791); Inte 98.7
PRK10429473 melibiose:sodium symporter; Provisional 98.7
TIGR01272310 gluP glucose/galactose transporter. Disruption of 98.69
TIGR00903368 2A0129 major facilitator 4 family protein. This fa 98.69
PRK15462 493 dipeptide/tripeptide permease D; Provisional 98.67
TIGR00896355 CynX cyanate transporter. This family of proteins 98.67
TIGR00894465 2A0114euk Na(+)-dependent inorganic phosphate cotr 98.66
PRK10207 489 dipeptide/tripeptide permease B; Provisional 98.64
PF03825400 Nuc_H_symport: Nucleoside H+ symporter 98.63
KOG2504509 consensus Monocarboxylate transporter [Carbohydrat 98.63
PRK09669444 putative symporter YagG; Provisional 98.63
COG2271448 UhpC Sugar phosphate permease [Carbohydrate transp 98.62
PRK15034462 nitrate/nitrite transport protein NarU; Provisiona 98.58
PRK10133438 L-fucose transporter; Provisional 98.56
PF13347428 MFS_2: MFS/sugar transport protein 98.55
PRK11043401 putative transporter; Provisional 98.53
COG2223417 NarK Nitrate/nitrite transporter [Inorganic ion tr 98.52
TIGR00924475 yjdL_sub1_fam amino acid/peptide transporter (Pept 98.51
PRK09584500 tppB putative tripeptide transporter permease; Rev 98.5
KOG0254513 consensus Predicted transporter (major facilitator 98.45
PF06609 599 TRI12: Fungal trichothecene efflux pump (TRI12); I 98.43
KOG0253528 consensus Synaptic vesicle transporter SV2 (major 98.39
KOG4686459 consensus Predicted sugar transporter [Carbohydrat 98.36
PRK11462460 putative transporter; Provisional 98.34
KOG0255 521 consensus Synaptic vesicle transporter SVOP and re 98.31
KOG2615 451 consensus Permease of the major facilitator superf 98.3
PTZ00207 591 hypothetical protein; Provisional 98.29
COG2211467 MelB Na+/melibiose symporter and related transport 98.28
KOG0637498 consensus Sucrose transporter and related proteins 98.24
TIGR00805 633 oat sodium-independent organic anion transporter. 98.18
TIGR00926654 2A1704 Peptide:H+ symporter (also transports b-lac 98.17
TIGR00885410 fucP L-fucose:H+ symporter permease. This family d 98.17
PF02487402 CLN3: CLN3 protein; InterPro: IPR003492 Batten's d 98.16
KOG2532 466 consensus Permease of the major facilitator superf 98.1
COG2807395 CynX Cyanate permease [Inorganic ion transport and 98.1
TIGR00788468 fbt folate/biopterin transporter. The only functio 98.09
PF0677985 DUF1228: Protein of unknown function (DUF1228); In 98.06
KOG3098461 consensus Uncharacterized conserved protein [Funct 98.06
TIGR01301477 GPH_sucrose GPH family sucrose/H+ symporter. This 98.06
TIGR00806 511 rfc RFC reduced folate carrier. Proteins of the RF 98.05
KOG1330 493 consensus Sugar transporter/spinster transmembrane 98.04
KOG3764 464 consensus Vesicular amine transporter [Intracellul 98.02
PF05978156 UNC-93: Ion channel regulatory protein UNC-93; Int 98.01
KOG3762618 consensus Predicted transporter [General function 98.01
KOG3762618 consensus Predicted transporter [General function 97.95
PF00083451 Sugar_tr: Sugar (and other) transporter; InterPro: 97.89
KOG0252538 consensus Inorganic phosphate transporter [Inorgan 97.88
KOG1237571 consensus H+/oligopeptide symporter [Amino acid tr 97.84
PF03209403 PUCC: PUCC protein; InterPro: IPR004896 This prote 97.84
PF1283277 MFS_1_like: MFS_1 like family 97.74
COG3104 498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 97.66
COG0738422 FucP Fucose permease [Carbohydrate transport and m 97.62
KOG2816 463 consensus Predicted transporter ADD1 (major facili 97.61
TIGR00769472 AAA ADP/ATP carrier protein family. These proteins 97.58
PF06963432 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi 97.56
PF06813250 Nodulin-like: Nodulin-like; InterPro: IPR010658 Th 97.53
KOG2533495 consensus Permease of the major facilitator superf 97.52
KOG4332454 consensus Predicted sugar transporter [Carbohydrat 97.43
KOG3574510 consensus Acetyl-CoA transporter [Inorganic ion tr 96.94
PRK03612521 spermidine synthase; Provisional 96.81
KOG2563 480 consensus Permease of the major facilitator superf 96.48
PF00854372 PTR2: POT family; InterPro: IPR000109 This entry r 96.42
PF06963432 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi 96.3
PF05631 354 DUF791: Protein of unknown function (DUF791); Inte 96.23
PF03092 433 BT1: BT1 family; InterPro: IPR004324 Members of th 96.11
TIGR00926 654 2A1704 Peptide:H+ symporter (also transports b-lac 96.05
KOG3810433 consensus Micronutrient transporters (folate trans 96.0
TIGR00939437 2a57 Equilibrative Nucleoside Transporter (ENT). 95.95
PF13000544 Acatn: Acetyl-coenzyme A transporter 1; InterPro: 95.64
PF02487402 CLN3: CLN3 protein; InterPro: IPR003492 Batten's d 95.32
KOG3098461 consensus Uncharacterized conserved protein [Funct 95.03
PF03219491 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 94.62
COG0477 338 ProP Permeases of the major facilitator superfamil 94.38
KOG2325 488 consensus Predicted transporter/transmembrane prot 93.81
PF00854 372 PTR2: POT family; InterPro: IPR000109 This entry r 93.5
KOG3880409 consensus Predicted small molecule transporter inv 91.12
COG3202509 ATP/ADP translocase [Energy production and convers 91.02
TIGR00769 472 AAA ADP/ATP carrier protein family. These proteins 90.66
PF01770 412 Folate_carrier: Reduced folate carrier; InterPro: 90.58
PF05978156 UNC-93: Ion channel regulatory protein UNC-93; Int 90.16
PRK03612 521 spermidine synthase; Provisional 89.89
COG4262508 Predicted spermidine synthase with an N-terminal m 89.25
PF07672267 MFS_Mycoplasma: Mycoplasma MFS transporter; InterP 88.39
PF1283277 MFS_1_like: MFS_1 like family 82.45
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=2.6e-41  Score=377.83  Aligned_cols=424  Identities=31%  Similarity=0.513  Sum_probs=357.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHcC--CCh----hHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 005249            3 GAALVAIAATIGNFLQGWDNATIAGAIVYIK--------KDLN--LGT----TVEGLVVAMSLIGATAITTCSGPISDWL   68 (706)
Q Consensus         3 r~~liliil~L~~fl~gl~~~iis~~lp~I~--------q~fG--LS~----s~igLl~S~~~Ig~~Igsl~~G~LaDR~   68 (706)
                      +..++.+.++++.+-.+|....+++..+.+.        +.+|  ++.    ...+.+.+++.+|.++|+++.+.++||+
T Consensus         8 ~L~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~   87 (485)
T KOG0569|consen    8 RLLLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRF   87 (485)
T ss_pred             HHHHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            3445566666777778888888777655433        3456  444    3466788999999999999999999999


Q ss_pred             CChHHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHH
Q 005249           69 GRRPMLILSSVLYFVSGLVMLW---SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFL  145 (706)
Q Consensus        69 GRRrvLlig~iL~aIgsll~a~---a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~al  145 (706)
                      |||..+.++.++..++.+++.+   .+++.+++++|++.|+..|......+-|+.|..|++.||....+.+.+..+|.++
T Consensus        88 GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll  167 (485)
T KOG0569|consen   88 GRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILL  167 (485)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHH
Confidence            9999999999888888877776   4789999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhhccCCchhhhc-ccchHHHHHHHHHhhccccchHHHHHHHHhhc
Q 005249          146 AYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVS-KGKMLEAKQVLQRLRGREDVSGEMALLVEGLG  224 (706)
Q Consensus       146 g~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~lflpEsp~~l~~-k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (706)
                      +..........+...|.+.+.+..+++++.+ +...++|||||||.. +++.+||++.++.+++.+|.+.+....     
T Consensus       168 ~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l-~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~-----  241 (485)
T KOG0569|consen  168 GQVLGLPSLLGTEDLWPYLLAFPLIPALLQL-ALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEM-----  241 (485)
T ss_pred             HHHHccHHhcCCCcchHHHHHHHHHHHHHHH-HHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHH-----
Confidence            9777766666677789999999888888755 457899999999988 899999999999999887543222100     


Q ss_pred             cCCCcchhhhhcCCCCCCCCCCCCchhhhhhhhcCCCCCcccccccccccchhhhHhhhccccCCCCCCCCccccccccc
Q 005249          225 IGGETSIEEYIIGPGDELADGEEPTDEKDKIRLYGPEEGLSWVAKPVTGQSSLALVSRQGSLANQSVPLMDPLVTLFGSV  304 (706)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (706)
                                                                                                      
T Consensus       242 --------------------------------------------------------------------------------  241 (485)
T KOG0569|consen  242 --------------------------------------------------------------------------------  241 (485)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCCCCCCCCccccCCCCCCccccccccccCCcchhhhhhccCCccccccCCCCCCCCCCccccccccccccccCCCCC
Q 005249          305 HEKLPESGSMRSTLFPTFGSMFSTAEHHVKHDHWDEESLQREGEDHASDIAGADSDDNLHSPLISRQTTSMEKDMAAPPS  384 (706)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  384 (706)
                                                        ++|     -                                     
T Consensus       242 ----------------------------------~~e-----~-------------------------------------  245 (485)
T KOG0569|consen  242 ----------------------------------LRE-----I-------------------------------------  245 (485)
T ss_pred             ----------------------------------HHH-----H-------------------------------------
Confidence                                              000     0                                     


Q ss_pred             CCcccccccccccccCCCccccccccCCCcccccchhhcccCCCcccCCccceeecccCCCCCCCCcccccCCCCCCccc
Q 005249          385 HGSILSMRRHSSLMQGSGEAVGSTGIGGGWQLAWKWTEREGEDGKKEGGFKRIYLHQEGVPGSRRGSLVSVPGYDVPEEG  464 (706)
Q Consensus       385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  464 (706)
                                                           +                                          
T Consensus       246 -------------------------------------~------------------------------------------  246 (485)
T KOG0569|consen  246 -------------------------------------E------------------------------------------  246 (485)
T ss_pred             -------------------------------------H------------------------------------------
Confidence                                                 0                                          


Q ss_pred             hHHHHHHHhhchhhhhhhhhccCCCCCCcCCCCccccCCCchHHHHhh-hhhhHHHHHHHHHHHHhhhhhhhhHhcHHHH
Q 005249          465 EYIQAAALVSQPALYSKELMDQHPVGPAMVHPSETASKGPSWAALLEA-GVKRALLVGVGIQILQQFSGINGVLYYTPQI  543 (706)
Q Consensus       465 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  543 (706)
                                                    +.+.++++..++.++++. ..++.+.+++.+.++++++|++.+.+|...+
T Consensus       247 ------------------------------~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i  296 (485)
T KOG0569|consen  247 ------------------------------EEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSI  296 (485)
T ss_pred             ------------------------------HhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHH
Confidence                                          000001234566667744 5677889999999999999999999999999


Q ss_pred             HHhhhh----------------------HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHH
Q 005249          544 LEQAGV----------------------AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVII  601 (706)
Q Consensus       544 ~~~~g~----------------------~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  601 (706)
                      +.++|+                      +.+++||+|||++++++..++.++.+++.+.....+....+..+..++++++
T Consensus       297 ~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~  376 (485)
T KOG0569|consen  297 FKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFL  376 (485)
T ss_pred             HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            999887                      8999999999999999999999999999888777644444556677899999


Q ss_pred             HHHHhhcccccchhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhccc
Q 005249          602 YFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVP  681 (706)
Q Consensus       602 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  681 (706)
                      |.+.|+.|.+|+++.+.+|+||++.|+.+.+++.+++|++.++..++++.+.+.+|- ..|+++++.++++.++.++++|
T Consensus       377 ~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lP  455 (485)
T KOG0569|consen  377 FIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLP  455 (485)
T ss_pred             HHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999999999999999999999999999996 6899999999999999999999


Q ss_pred             CCCCCChHHHHHHHHcC
Q 005249          682 ETKGMPLEVITEFFAVG  698 (706)
Q Consensus       682 et~~~~~~~~~~~~~~~  698 (706)
                      |||||+.+||.+.++++
T Consensus       456 ETkgr~~~eI~~~~~~~  472 (485)
T KOG0569|consen  456 ETKGRTPYEIIEELEKR  472 (485)
T ss_pred             ccCCCCHHHHHHHHHhC
Confidence            99999999999999877

>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only] Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) Back     alignment and domain information
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age Back     alignment and domain information
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters Back     alignment and domain information
>KOG3098 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans Back     alignment and domain information
>KOG3762 consensus Predicted transporter [General function prediction only] Back     alignment and domain information
>KOG3762 consensus Predicted transporter [General function prediction only] Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism] Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>PF12832 MFS_1_like: MFS_1 like family Back     alignment and domain information
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>TIGR00769 AAA ADP/ATP carrier protein family Back     alignment and domain information
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 Back     alignment and domain information
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins Back     alignment and domain information
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK03612 spermidine synthase; Provisional Back     alignment and domain information
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters Back     alignment and domain information
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 Back     alignment and domain information
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism] Back     alignment and domain information
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT) Back     alignment and domain information
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ] Back     alignment and domain information
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age Back     alignment and domain information
>KOG3098 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions Back     alignment and domain information
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] Back     alignment and domain information
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only] Back     alignment and domain information
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters Back     alignment and domain information
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only] Back     alignment and domain information
>COG3202 ATP/ADP translocase [Energy production and conversion] Back     alignment and domain information
>TIGR00769 AAA ADP/ATP carrier protein family Back     alignment and domain information
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) Back     alignment and domain information
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans Back     alignment and domain information
>PRK03612 spermidine synthase; Provisional Back     alignment and domain information
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only] Back     alignment and domain information
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS) Back     alignment and domain information
>PF12832 MFS_1_like: MFS_1 like family Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query706
4gby_A491 The Structure Of The Mfs (Major Facilitator Superfa 3e-23
4gby_A491 The Structure Of The Mfs (Major Facilitator Superfa 2e-13
>pdb|4GBY|A Chain A, The Structure Of The Mfs (Major Facilitator Superfamily) Proton:xylose Symporter Xyle Bound To D-Xylose Length = 491 Back     alignment and structure 
Iteration: 1

 Score =  107 bits (266), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 118/236 (50%), Gaps = 35/236 (14%)
Query: 7   VAIAATIGNFLQGWDNATIAGAI-----VYIKKDLNL----GTTVEGLVVAMSLIGATAI 57
           + + AT+G  L G+D A I+G +     V++    NL      ++ G  VA +LIG    
Sbjct: 13  ITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQ-NLSESAANSLLGFCVASALIGCIIG 71
Query: 58  TTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW--------SPN----VYV------LCI 99
               G  S+  GRR  L +++VL+F+SG+   W        +P+    VY+        I
Sbjct: 72  GALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVI 131
Query: 100 ARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGM------ 153
            R++ G GVGLA  L P+YI+E AP+ IRG+L +  QF    G  L YC+ + +      
Sbjct: 132 YRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDA 191
Query: 154 SLLASPSWRLMLGVLSIPXXXXXXXXXXXXPESPRWLVSKGKMLEAKQVLQRLRGR 209
           S L +  WR M     IP            PESPRWL+S+GK  +A+ +L+++ G 
Sbjct: 192 SWLNTDGWRYMFASECIP-ALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKIMGN 246
>pdb|4GBY|A Chain A, The Structure Of The Mfs (Major Facilitator Superfamily) Proton:xylose Symporter Xyle Bound To D-Xylose Length = 491 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query706
2gfp_A375 EMRD, multidrug resistance protein D; membrane pro 5e-11
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 5e-07
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Length = 375 Back     alignment and structure
 Score = 63.8 bits (156), Expect = 5e-11
 Identities = 32/157 (20%), Positives = 66/157 (42%), Gaps = 6/157 (3%)

Query: 32  IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS 91
           + +DLN+       V+   L+         GPISD +GRRP++++   ++ ++ LV + +
Sbjct: 26  MARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTT 85

Query: 92  PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCM-- 149
            ++ VL  A  + G G G+   +      +          N+L     + G+ ++  +  
Sbjct: 86  SSLTVLIAASAMQGMGTGVGGVMARTLPRDLYERTQLRHANSL----LNMGILVSPLLAP 141

Query: 150 VFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPES 186
           + G  L    +WR     L +           ++PE+
Sbjct: 142 LIGGLLDTMWNWRACYLFLLVLCAGVTFSMARWMPET 178
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Length = 451 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query706
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 100.0
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 99.98
3o7q_A438 L-fucose-proton symporter; transporter, multi-PASS 99.97
4aps_A491 DI-OR tripeptide H+ symporter; transport protein, 99.95
2gfp_A375 EMRD, multidrug resistance protein D; membrane pro 99.94
2xut_A524 Proton/peptide symporter family protein; transport 99.89
2cfq_A417 Lactose permease; transport, transport mechanism, 99.89
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 99.35
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 99.3
2cfq_A417 Lactose permease; transport, transport mechanism, 99.21
3o7q_A438 L-fucose-proton symporter; transporter, multi-PASS 99.16
4aps_A491 DI-OR tripeptide H+ symporter; transport protein, 98.99
2gfp_A 375 EMRD, multidrug resistance protein D; membrane pro 98.92
2xut_A 524 Proton/peptide symporter family protein; transport 98.77
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
Probab=100.00  E-value=7.7e-45  Score=397.03  Aligned_cols=418  Identities=30%  Similarity=0.543  Sum_probs=330.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--------ChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHH
Q 005249            4 AALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNL--------GTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLI   75 (706)
Q Consensus         4 ~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGL--------S~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLl   75 (706)
                      .+.+.++++++.++.++|..+++..+|.+.++++.        +..+.+++.+++.+|+++|++++|+++||+|||++++
T Consensus        10 ~~~i~~~a~lg~~~~Gyd~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~G~~iG~~~~G~laDr~GRk~~l~   89 (491)
T 4gc0_A           10 IFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLK   89 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGGTHHHHHHHHTGGGCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred             HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH
Confidence            35566677889999999999999999999998853        2357889999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHH------------------hhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHH
Q 005249           76 LSSVLYFVSGLVML------------------WSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQF  137 (706)
Q Consensus        76 ig~iL~aIgsll~a------------------~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~a  137 (706)
                      ++.+++.+++++++                  +++++++++++|+++|++.|+..+...++++|+.|+++|++..++.+.
T Consensus        90 ~~~~l~~i~~i~~a~~~~~~~~~~~~~~~~~~~a~~~~~l~~~R~l~G~g~G~~~~~~~~~i~E~~p~~~rg~~~~~~~~  169 (491)
T 4gc0_A           90 IAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQF  169 (491)
T ss_dssp             HHHHHHHHHHHHHHCTTTTTSCSSSSSSCCGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhhhhcchhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHhhhhhHHhhhh
Confidence            99999999999998                  478999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHh------ccchhhHHHHHHHHHHHHHHHHHHhhccCCchhhhcccchHHHHHHHHHhhcccc
Q 005249          138 TGSGGMFLAYCMVFGMSLL------ASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRGRED  211 (706)
Q Consensus       138 g~~LG~alg~ll~~~l~l~------~~~GWR~~FlI~ail~LV~~ll~~lflpEsp~~l~~k~~~~~~~~~~~~~~~~~~  211 (706)
                      +..+|.++++.........      ....||+.+.+..++.++. ++..+++||+|||+..+++.+++++.+++....++
T Consensus       170 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~peSp~~L~~~~~~~~a~~~l~~~~~~~~  248 (491)
T 4gc0_A          170 AIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLF-LMLLYTVPESPRWLMSRGKQEQAEGILRKIMGNTL  248 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSCTTTTTTTHHHHHHHTTHHHHHHH-HHHGGGSCCCHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhhhhcchhhccccccccccchhhHHHhhhhhhhhhhh-hhhhhcCCCChHHHHHcCchhHHHHhHHHhcCCch
Confidence            9999999987666555432      2346888887777766664 45568899999999999999999888877654332


Q ss_pred             chHHHHHHHHhhccCCCcchhhhhcCCCCCCCCCCCCchhhhhhhhcCCCCCcccccccccccchhhhHhhhccccCCCC
Q 005249          212 VSGEMALLVEGLGIGGETSIEEYIIGPGDELADGEEPTDEKDKIRLYGPEEGLSWVAKPVTGQSSLALVSRQGSLANQSV  291 (706)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (706)
                      ...+....                                .+.                                     
T Consensus       249 ~~~~~~~~--------------------------------~~~-------------------------------------  259 (491)
T 4gc0_A          249 ATQAVQEI--------------------------------KHS-------------------------------------  259 (491)
T ss_dssp             HHHHHHHH--------------------------------HHH-------------------------------------
T ss_pred             hHHHHHHH--------------------------------HHH-------------------------------------
Confidence            11110000                                000                                     


Q ss_pred             CCCCccccccccccccCCCCCCCCccccCCCCCCccccccccccCCcchhhhhhccCCccccccCCCCCCCCCCcccccc
Q 005249          292 PLMDPLVTLFGSVHEKLPESGSMRSTLFPTFGSMFSTAEHHVKHDHWDEESLQREGEDHASDIAGADSDDNLHSPLISRQ  371 (706)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  371 (706)
                                                                    .+++                              
T Consensus       260 ----------------------------------------------~~~~------------------------------  263 (491)
T 4gc0_A          260 ----------------------------------------------LDHG------------------------------  263 (491)
T ss_dssp             ----------------------------------------------HHHH------------------------------
T ss_pred             ----------------------------------------------HHhh------------------------------
Confidence                                                          0000                              


Q ss_pred             ccccccccCCCCCCCcccccccccccccCCCccccccccCCCcccccchhhcccCCCcccCCccceeecccCCCCCCCCc
Q 005249          372 TTSMEKDMAAPPSHGSILSMRRHSSLMQGSGEAVGSTGIGGGWQLAWKWTEREGEDGKKEGGFKRIYLHQEGVPGSRRGS  451 (706)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  451 (706)
                                                                                                      
T Consensus       264 --------------------------------------------------------------------------------  263 (491)
T 4gc0_A          264 --------------------------------------------------------------------------------  263 (491)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccCCCCCCccchHHHHHHHhhchhhhhhhhhccCCCCCCcCCCCccccCCCchHHHHhhhhhhHHHHHHHHHHHHhhh
Q 005249          452 LVSVPGYDVPEEGEYIQAAALVSQPALYSKELMDQHPVGPAMVHPSETASKGPSWAALLEAGVKRALLVGVGIQILQQFS  531 (706)
Q Consensus       452 ~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  531 (706)
                                                   +                    +.....   .....+++.+++....++++.
T Consensus       264 -----------------------------~--------------------~~~~~~---~~~~~~~~~~~~~~~~~~~~~  291 (491)
T 4gc0_A          264 -----------------------------R--------------------KTGGRL---LMFGVGVIVIGVMLSIFQQFV  291 (491)
T ss_dssp             -----------------------------H--------------------HHTTHH---HHSCCTHHHHHHHHHHHHHHT
T ss_pred             -----------------------------h--------------------hhhhHH---HHhcccHHHHHHHHHHHHHHh
Confidence                                         0                    000000   111244567778888888999


Q ss_pred             hhhhhHhcHHHHHHhhhh----------------------HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhh
Q 005249          532 GINGVLYYTPQILEQAGV----------------------AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPV  589 (706)
Q Consensus       532 g~~~~~~~~~~~~~~~g~----------------------~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  589 (706)
                      +++.+.+|.|.+++..+.                      +++++||+|||+.++.+..++.++++.+.......     
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~Grr~~~~~~~~~~~~~~~~l~~~~~~~-----  366 (491)
T 4gc0_A          292 GINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQ-----  366 (491)
T ss_dssp             CHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHTT-----
T ss_pred             hhhHHHhcchHHHHhcCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhcCcchhccchHHHHHHHHHHHHHHhcc-----
Confidence            999999999998876543                      88999999999999999888888887776544332     


Q ss_pred             HHHHHHHHHHHHHHHHhhcccccchhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHhHHHHHHHh------hchhhHHH
Q 005249          590 LKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSS------IGLAGAFG  663 (706)
Q Consensus       590 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~------~g~~~~~~  663 (706)
                      ......+.+++++..+|..+++++.+++++|++|++.|+++.|++++++++++++++.++|.+.+.      .++..+|+
T Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~fPt~~R~~~~g~~~~~~~~~~~i~~~~~p~l~~~~~~~~~~~~~~~~~  446 (491)
T 4gc0_A          367 APGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYW  446 (491)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTTTHHHHHHHHHSSCTTTHHHHHHHHHHHHHHHHHHHHTHHHHHCHHHHHHHHHTTCHHHH
T ss_pred             cchHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHH
Confidence            123445666777788888889999999999999999999999999999999999999999887543      46667899


Q ss_pred             HHHHHHHHHHHHHHhcccCCCCCChHHHHHHHHcCcccccc
Q 005249          664 VYAVVCFISWVFVFLRVPETKGMPLEVITEFFAVGARQATK  704 (706)
Q Consensus       664 ~~~~~~~~~~~~~~~~~~et~~~~~~~~~~~~~~~~~~~~~  704 (706)
                      +++++++++.+++++++|||||+++||||+.|+++.+++.+
T Consensus       447 i~~~~~~~~~i~~~~~~PETkg~tLeei~~~f~~~~~~~~~  487 (491)
T 4gc0_A          447 IYGCMGVLAALFMWKFVPETKGKTLEELEALWEPETKKTQQ  487 (491)
T ss_dssp             HHHHHHHHHHHHHHHHCCCCTTCCHHHHGGGTC--------
T ss_pred             HHHHHHHHHHHHHHheecCCCCCCHHHHHHHhCCCCccccc
Confidence            99999999999999999999999999999999877665443
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 706
d1pw4a_447 f.38.1.1 (A:) Glycerol-3-phosphate transporter {Es 6e-12
d1pw4a_447 f.38.1.1 (A:) Glycerol-3-phosphate transporter {Es 3e-07
d1pw4a_447 f.38.1.1 (A:) Glycerol-3-phosphate transporter {Es 2e-06
d1pv7a_417 f.38.1.2 (A:) Lactose permease {Escherichia coli [ 9e-09
d1pv7a_417 f.38.1.2 (A:) Lactose permease {Escherichia coli [ 9e-07
d1pv7a_417 f.38.1.2 (A:) Lactose permease {Escherichia coli [ 6e-05
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Length = 447 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

 Score = 65.9 bits (159), Expect = 6e-12
 Identities = 30/188 (15%), Positives = 64/188 (34%), Gaps = 6/188 (3%)

Query: 6   LVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPIS 65
            + +    G           A A+ Y+  +        G  ++   I         G +S
Sbjct: 25  QIFLGIFFGYAAYYLVRKNFALAMPYLV-EQGFSRGDLGFALSGISIAYGFSKFIMGSVS 83

Query: 66  DWLGRRPMLILSSVLYFVSGLVMLWSP----NVYVLCIARLLDGFGVGLAVTLVPLYISE 121
           D    R  L    +L     L M + P    ++ V+ +   L G+  G+        +  
Sbjct: 84  DRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVH 143

Query: 122 TAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVF 181
               + RG + ++     + G  +   ++F + +     W   L + +  A+L   FA  
Sbjct: 144 WWSQKERGGIVSVWNCAHNVGGGI-PPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFA 202

Query: 182 FLPESPRW 189
            + ++P+ 
Sbjct: 203 MMRDTPQS 210
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Length = 447 Back     information, alignment and structure
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Length = 447 Back     information, alignment and structure
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Length = 417 Back     information, alignment and structure
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Length = 417 Back     information, alignment and structure
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Length = 417 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query706
d1pw4a_447 Glycerol-3-phosphate transporter {Escherichia coli 100.0
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 99.93
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 99.37
d1pw4a_447 Glycerol-3-phosphate transporter {Escherichia coli 99.1
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.7e-31  Score=281.69  Aligned_cols=184  Identities=16%  Similarity=0.099  Sum_probs=163.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHH
Q 005249            3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF   82 (706)
Q Consensus         3 r~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~a   82 (706)
                      .+|.++..++++++..++++..++.+.|.+. ++|++.++.|++.+++.++++++++++|+++||+|||+++.++.++.+
T Consensus        22 ~~w~i~~~~~~~~~~~~~~~~~~~~~~p~~~-~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~  100 (447)
T d1pw4a_          22 LRWQIFLGIFFGYAAYYLVRKNFALAMPYLV-EQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAA  100 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTSHHHHHHHTT-SSTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHH
Confidence            3577888888889999999888888888775 689999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhh----hHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 005249           83 VSGLVMLWSP----NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLAS  158 (706)
Q Consensus        83 Igsll~a~a~----s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~  158 (706)
                      ++.+++++++    +++.++++|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.++++....... ...
T Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~-~~~  179 (447)
T d1pw4a_         101 AVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGM-AWF  179 (447)
T ss_dssp             HHHHHHHHCHHHHSSSSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHH-HHT
T ss_pred             HHHhhccccchhhhhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhhcccccccccccccchhhhhhhhhhhhHh-hhh
Confidence            9999988764    77889999999999999999999999999999999999999999999999999866554332 234


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHhhccCCch
Q 005249          159 PSWRLMLGVLSIPALLYFAFAVFFLPESPR  188 (706)
Q Consensus       159 ~GWR~~FlI~ail~LV~~ll~~lflpEsp~  188 (706)
                      .+||+.|++.+++.++..++.+++.+++|+
T Consensus       180 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (447)
T d1pw4a_         180 NDWHAALYMPAFCAILVALFAFAMMRDTPQ  209 (447)
T ss_dssp             CCSTTCTHHHHHHHHHHHHHHHHHCCCSST
T ss_pred             hcccccchhhhhhHHHHHHHHHHhcccchh
Confidence            489999999999888888888888888764
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure