Citrus Sinensis ID: 005279
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 704 | 2.2.26 [Sep-21-2011] | |||||||
| P29001 | 649 | Acid beta-fructofuranosid | N/A | no | 0.901 | 0.978 | 0.640 | 0.0 | |
| O24509 | 651 | Acid beta-fructofuranosid | N/A | no | 0.782 | 0.846 | 0.696 | 0.0 | |
| P80065 | 661 | Beta-fructofuranosidase, | N/A | no | 0.896 | 0.954 | 0.620 | 0.0 | |
| Q43857 | 642 | Acid beta-fructofuranosid | N/A | no | 0.821 | 0.900 | 0.668 | 0.0 | |
| Q39041 | 664 | Acid beta-fructofuranosid | yes | no | 0.867 | 0.920 | 0.620 | 0.0 | |
| Q43348 | 648 | Acid beta-fructofuranosid | no | no | 0.857 | 0.932 | 0.610 | 0.0 | |
| P29000 | 636 | Acid beta-fructofuranosid | N/A | no | 0.883 | 0.977 | 0.572 | 0.0 | |
| P93761 | 640 | Acid beta-fructofuranosid | N/A | no | 0.821 | 0.903 | 0.594 | 0.0 | |
| P49175 | 670 | Beta-fructofuranosidase 1 | N/A | no | 0.786 | 0.826 | 0.610 | 0.0 | |
| Q5FC15 | 610 | 6(G)-fructosyltransferase | N/A | no | 0.792 | 0.914 | 0.556 | 0.0 |
| >sp|P29001|INVA_VIGRR Acid beta-fructofuranosidase OS=Vigna radiata var. radiata GN=INVA PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/664 (64%), Positives = 509/664 (76%), Gaps = 29/664 (4%)
Query: 11 LPDGERPRPTR--RRSIVLVLSGLLVVGFLVALLSDNGSIAPANVIDNDNNNVNDNAKNG 68
LP PT R+ ++ VL GLL + LVA S P + + +N + +
Sbjct: 8 LPTSSHAAPTSSTRKDLLFVLCGLLFLSSLVAYGGYRASGVPHAHLSSPTSNHQQDHQ-- 65
Query: 69 LNDVSSSSKEPERLRPFTSASSAGVSEKSNRRF----GSRTASYPWTNNMLSWQRTAFHF 124
S +S + P + S+GVSEKS+ G + ++PW N+MLSWQRT+FHF
Sbjct: 66 ----SPTSLPSSKWYPVSRGVSSGVSEKSSNLLFAGEGGASEAFPWDNSMLSWQRTSFHF 121
Query: 125 QPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQ 184
QP+KNWMNDPNGP++YKGWYH FYQYNPNGA+WGDIVWGHAVS+D+IHW HLPLAMVADQ
Sbjct: 122 QPEKNWMNDPNGPMYYKGWYHFFYQYNPNGAVWGDIVWGHAVSRDMIHWLHLPLAMVADQ 181
Query: 185 WYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVL 244
WYD GVWTGSATILP+G+++MLYTGSTNESVQVQNLAYPADPSDPLL+ W+K+ GNPVL
Sbjct: 182 WYDKQGVWTGSATILPNGEIIMLYTGSTNESVQVQNLAYPADPSDPLLLDWIKHTGNPVL 241
Query: 245 VPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLHGV 304
VPPPGIGAKDFRDPTTAWLTSEGKWRI IGS++N+TGI VYDT+DF YEL G+L V
Sbjct: 242 VPPPGIGAKDFRDPTTAWLTSEGKWRITIGSKLNKTGIALVYDTEDFKTYELKEGLLRAV 301
Query: 305 PNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIGTYHEKNVTWV 364
P TGMWECVDF+PVS +GLDTS NG VKHV+K S+DDDRHDYYAIGTY + V +
Sbjct: 302 PGTGMWECVDFFPVSKKNGNGLDTSVNGAEVKHVMKVSLDDDRHDYYAIGTYDDNKVLFT 361
Query: 365 PDNPEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQGIP 424
PD+ + DVG+G+RYDYG+FYASKTFYDQNK RR+LWGWIGESDSE ADV KGWAS+Q IP
Sbjct: 362 PDDVKNDVGVGLRYDYGIFYASKTFYDQNKDRRILWGWIGESDSEYADVTKGWASVQSIP 421
Query: 425 RTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVAEFEL 484
RTV LDTKTGSNLLQWPV+EV+SLRL S EFK ++ KPGSV+ LD+ +ATQLD+VAEFE+
Sbjct: 422 RTVRLDTKTGSNLLQWPVDEVESLRLRSDEFKSLKAKPGSVVSLDIETATQLDVVAEFEI 481
Query: 485 DKAALEKTAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSL 544
D +LEKTAESN EF+CSSS G+A+RGALGPFGLLVLAD+ LSE TPVYFY+ KG++G+L
Sbjct: 482 DTESLEKTAESNEEFTCSSSGGAAQRGALGPFGLLVLADEGLSEYTPVYFYVIKGRNGNL 541
Query: 545 KTYFCTDQSSTGRREILNESIGEHISCYCPNEHMYMLALSIESSQSIWNIVYVYLQVDHS 604
+T FC+DQS + + + + I + E + L VDHS
Sbjct: 542 RTSFCSDQSRSSQANDVRKQIFGSVVPVLKGEKFSLRML-----------------VDHS 584
Query: 605 IVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNSAFIRPYPDD 664
IVE FAQGGRT +TSRVYPTKAIYGAAR+FLFNNAT A+VT+SLK WQMNSAFIRP+P +
Sbjct: 585 IVESFAQGGRTCVTSRVYPTKAIYGAARLFLFNNATEATVTASLKVWQMNSAFIRPFPFN 644
Query: 665 DDER 668
D++
Sbjct: 645 PDQK 648
|
Possible role in the continued mobilization of sucrose to sink organs. Vigna radiata var. radiata (taxid: 3916) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 6 |
| >sp|O24509|INVA_PHAVU Acid beta-fructofuranosidase OS=Phaseolus vulgaris PE=2 SV=1 | Back alignment and function description |
|---|
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/570 (69%), Positives = 467/570 (81%), Gaps = 19/570 (3%)
Query: 102 GSRTASYPWTNNMLSWQRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIV 161
G + ++PW N+MLSWQRT+FHFQP+KNWMNDPNGP++YKGWYH FYQYNPNGA+WGDIV
Sbjct: 99 GGASEAFPWDNSMLSWQRTSFHFQPEKNWMNDPNGPMYYKGWYHFFYQYNPNGAVWGDIV 158
Query: 162 WGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNL 221
WGHAVS+D+IHW HLPLAMVADQWYD GVWTGSATILP+G+++MLYTGSTNESVQVQNL
Sbjct: 159 WGHAVSRDMIHWLHLPLAMVADQWYDKQGVWTGSATILPNGEIIMLYTGSTNESVQVQNL 218
Query: 222 AYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTG 281
AYPADPSDPLL+ W+K+PGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRI IGS++N+TG
Sbjct: 219 AYPADPSDPLLVDWIKHPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRITIGSKLNKTG 278
Query: 282 ITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSH--NGPGVKHVV 339
I VYDT DF YEL G L VP TGMWECVDF+PVS E+GLDTS NG VK+V+
Sbjct: 279 IALVYDTDDFKTYELKNGHLRAVPGTGMWECVDFFPVSKKNENGLDTSLSINGAEVKYVM 338
Query: 340 KASMDDDRHDYYAIGTYHEKNVTWVPDNPEIDVGIGIRYDYGLFYASKTFYDQNKKRRVL 399
K S+DDDRHDYY IGTY E V + PD+ + DVG+G+RYDYG+FYASKTFYDQN RR+L
Sbjct: 339 KVSLDDDRHDYYTIGTYDENKVLFTPDDVKNDVGVGLRYDYGIFYASKTFYDQNMDRRIL 398
Query: 400 WGWIGESDSEIADVKKGWASLQGIPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIE 459
WGWIGESDSE ADV KGWAS+Q IPRTV LD KTGSNLLQWPV EV+SLRL S EFK ++
Sbjct: 399 WGWIGESDSEYADVTKGWASVQSIPRTVRLDKKTGSNLLQWPVAEVESLRLRSDEFKSLK 458
Query: 460 LKPGSVMPLDVGSATQLDIVAEFELDKAALEKTAESNVEFSCSSSEGSAERGALGPFGLL 519
KPGSV+ LD+ +ATQLD+VAEFE+D +L+KTA+SN EF+CS+S G+A+RGALGPFGLL
Sbjct: 459 AKPGSVVSLDIETATQLDVVAEFEIDAESLQKTAQSNEEFTCSTSGGAAQRGALGPFGLL 518
Query: 520 VLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSSTGRREILNESIGEHISCYCPNEHMY 579
VLAD+ LSE TPVYFY+ KG++G+LKT FC+DQS + + + + I +I E
Sbjct: 519 VLADEGLSEYTPVYFYVIKGRNGNLKTSFCSDQSRSSQPNDVRKQIFGNIVPVLEGEKFS 578
Query: 580 MLALSIESSQSIWNIVYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNA 639
+ L VDHSIVE FAQGGRT +TSRVYPTKAIYGAAR+FLFNNA
Sbjct: 579 LRML-----------------VDHSIVESFAQGGRTCVTSRVYPTKAIYGAARLFLFNNA 621
Query: 640 TGASVTSSLKAWQMNSAFIRPYPDDDDERH 669
T A+VT+SLK WQMNSAFIRP+P + D+++
Sbjct: 622 TEATVTASLKIWQMNSAFIRPFPFNPDQKN 651
|
Phaseolus vulgaris (taxid: 3885) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|P80065|INVB_DAUCA Beta-fructofuranosidase, soluble isoenzyme I OS=Daucus carota GN=INV*DC4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 836 bits (2160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/670 (62%), Positives = 503/670 (75%), Gaps = 39/670 (5%)
Query: 7 SYNPLPDG----ERPRPTR----RRSIVLVLSGLL---VVGFLVALLSDNGSIAPANVID 55
SY P PD P P R RR I +V S LL ++ F++ LL + NV
Sbjct: 17 SYTPRPDSPETRHEPDPDRSKTNRRPIKIVSSVLLSTLILSFVIFLLVN------PNVQQ 70
Query: 56 NDNNNVNDNAKNGLNDVSSSSKEPERLRPFTSASSAGVSEKSNRRFGSRTASYPWTNNML 115
V+ N+ NG D + +SK PE L P + S GVSEKS R+ + SYPWTN+ML
Sbjct: 71 VVRKKVSKNS-NG-EDRNKASKSPEMLGPPSRGVSQGVSEKSFRQ-ATAEPSYPWTNDML 127
Query: 116 SWQRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYH 175
SWQRT+FHFQPQ+NWMNDPNGP+F+ GWYHLFYQYNP+ AIWG+I WGHA+S+DLI+W H
Sbjct: 128 SWQRTSFHFQPQENWMNDPNGPLFHMGWYHLFYQYNPDSAIWGNITWGHAISRDLINWLH 187
Query: 176 LPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKW 235
LP AM DQWYDI GVWTGSAT+LPDGK++MLYTG T++ VQVQNLAYPA+ SDPLL+ W
Sbjct: 188 LPFAMQPDQWYDINGVWTGSATVLPDGKIVMLYTGDTDDLVQVQNLAYPANLSDPLLLDW 247
Query: 236 VKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYE 295
+KYP NPV+ PPPGIG+ DFRDPTTAW+ +GKWRI IGS++N+TGI+ +Y T DFI YE
Sbjct: 248 IKYPDNPVMFPPPGIGSTDFRDPTTAWIGRDGKWRITIGSKVNKTGISLMYKTTDFITYE 307
Query: 296 LLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIGT 355
LL +LH VP TGMWECVDFYPVS TG +GLDTS NGPGVKHV+K+S+DDDRHDYYA+GT
Sbjct: 308 LLDNLLHAVPGTGMWECVDFYPVSVTGSNGLDTSVNGPGVKHVLKSSLDDDRHDYYALGT 367
Query: 356 YHEKNVTWVPDNPEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKK 415
Y N W PDNPE+DVGIG+R DYG +YASKTFYDQ+K+RR+LWGWIGE+DSE AD+ K
Sbjct: 368 YDPINDKWTPDNPELDVGIGLRLDYGKYYASKTFYDQDKERRLLWGWIGETDSESADLLK 427
Query: 416 GWASLQGIPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQ 475
GWAS+Q IPRTV D KTG+N+LQWPV+EV+SLR S E +ELKPGS++PL + SA Q
Sbjct: 428 GWASVQSIPRTVVFDKKTGTNILQWPVKEVESLRSRSYEIDDVELKPGSLVPLKISSAAQ 487
Query: 476 LDIVAEFELDKAALEKTAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFY 535
LDIVA FE+D+ A + T E++ ++C++SEG+A RG LGPFG+LVLADD LSE TPVYFY
Sbjct: 488 LDIVASFEVDEEAFKGTYEADASYNCTASEGAAGRGILGPFGILVLADDPLSELTPVYFY 547
Query: 536 IAKGKDGSLKTYFCTDQS-STGRREILNESIGEHISCYCPNEHMYMLALSIESSQSIWNI 594
IAKG DG+ KTYFC DQS S+ ++ E G + P H L++
Sbjct: 548 IAKGVDGNAKTYFCADQSRSSTASDVDKEVYGSDV----PVLHGESLSMR---------- 593
Query: 595 VYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMN 654
L VDHSIVE FAQGGRT ITSRVYPT+AIY AARVFLFNNATG SVT+S+KAWQM
Sbjct: 594 ----LLVDHSIVESFAQGGRTVITSRVYPTRAIYSAARVFLFNNATGVSVTASVKAWQMA 649
Query: 655 SAFIRPYPDD 664
SA ++P+P D
Sbjct: 650 SATLKPFPFD 659
|
May participate in the regulation of the hexose level in mature tissues and in the utilization of sucrose stored in vacuoles. Daucus carota (taxid: 4039) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q43857|INVA_VICFA Acid beta-fructofuranosidase OS=Vicia faba GN=VCINV PE=2 SV=1 | Back alignment and function description |
|---|
Score = 832 bits (2148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/600 (66%), Positives = 465/600 (77%), Gaps = 22/600 (3%)
Query: 76 SKEPERLRPFTSASSAGVSEKSNRRFGS-----RTASYPWTNNMLSWQRTAFHFQPQKNW 130
S E R + S+GVSEKSN S S+PW N MLSWQRTAFHFQP+KNW
Sbjct: 60 SDEATRPTTLSRGVSSGVSEKSNTFLLSGNLVGEGGSFPWNNTMLSWQRTAFHFQPEKNW 119
Query: 131 MNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMG 190
MNDPNGP++YKGWYH FYQYNPNGA+WGDIVWGHAVS+DLIHW HLPLAMVADQWYD G
Sbjct: 120 MNDPNGPLYYKGWYHFFYQYNPNGAVWGDIVWGHAVSRDLIHWLHLPLAMVADQWYDSNG 179
Query: 191 VWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGI 250
VWTGSATILPDG+++MLYTGSTNE VQVQNLAYPAD +DPLL+ W+KYP NPVLVPPPGI
Sbjct: 180 VWTGSATILPDGQVIMLYTGSTNEFVQVQNLAYPADLNDPLLVDWIKYPSNPVLVPPPGI 239
Query: 251 GAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLHGVPNTGMW 310
KDFRDPTTAWLT+EGKWRI IGS+IN+TG+ VYDT DF YE +L+ VP TGMW
Sbjct: 240 LPKDFRDPTTAWLTTEGKWRITIGSKINKTGVALVYDTVDFKTYERKDMLLNAVPGTGMW 299
Query: 311 ECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIGTYHEKNVTWVPDNPEI 370
ECVDF+PVS E+GLDTS G VKHV+K S+DDDRHDYYA+GTY EK V ++ D+ E
Sbjct: 300 ECVDFFPVSMKSENGLDTSFTGDEVKHVMKVSLDDDRHDYYALGTYDEKKVKFIADDFEN 359
Query: 371 DVGIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQGIPRTVALD 430
DVGIG+RYDYG+FYASKTFYDQ K RRVLWGWIGESDSE ADV KGWAS+Q IPR V LD
Sbjct: 360 DVGIGLRYDYGIFYASKTFYDQKKDRRVLWGWIGESDSEYADVAKGWASVQSIPRIVKLD 419
Query: 431 TKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVAEFELDKAALE 490
KTGSNLLQWPV EV+SLRL S EF+ +++KPG+V+ +D+ +ATQLDIVAEFE+DK ALE
Sbjct: 420 KKTGSNLLQWPVAEVESLRLRSDEFQNLKVKPGAVVSVDIETATQLDIVAEFEIDKEALE 479
Query: 491 KTAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCT 550
KTA+SNVE+ C++S G++ RGALGPFGL VLAD+ LSE TPVYFY+ KG +G L T FC+
Sbjct: 480 KTAQSNVEYECNTSGGASRRGALGPFGLYVLADNGLSEYTPVYFYVVKGINGKLHTSFCS 539
Query: 551 DQSSTGRREILNESIGEHISCYCPNEHMYMLALSIESSQSIWNIVYVYLQVDHSIVEGFA 610
DQS + +++ I + E + + L VDHSIVE FA
Sbjct: 540 DQSRSSLANDVHKQIYGSVVPVLEGEKLSLRIL-----------------VDHSIVESFA 582
Query: 611 QGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNSAFIRPYPDDDDERHS 670
QGGRT ITSRVYPT+AIYGAAR+FLFNNA +VT+SLK WQMNSAFIRPY D + S
Sbjct: 583 QGGRTCITSRVYPTRAIYGAARLFLFNNAIETNVTASLKVWQMNSAFIRPYHPDQKRQTS 642
|
Vicia faba (taxid: 3906) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q39041|INVA4_ARATH Acid beta-fructofuranosidase 4, vacuolar OS=Arabidopsis thaliana GN=BFRUCT4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/670 (62%), Positives = 490/670 (73%), Gaps = 59/670 (8%)
Query: 12 PDGERPRPTRRR---SIVLVLSGLLVVGFLVALLSDNGSIAPANVIDNDNNNVNDNAKNG 68
P+ E P RRR ++ V GLL + F VAL++ + D + ND +
Sbjct: 29 PNQETHGPRRRRPFKGLLAVSFGLLFIAFYVALIATH-----------DGSRSNDEGIDE 77
Query: 69 LNDVSSSSKEPERLRPFTSASSAGVSEKSN----RRFGSR-TASYPWTNNMLSWQRTAFH 123
++S ++ AGVSEK N + G R T ++ W N+MLSWQRTAFH
Sbjct: 78 TETITSRAR------------LAGVSEKRNDGLWKLSGDRNTPAFEWNNSMLSWQRTAFH 125
Query: 124 FQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVAD 183
FQP++NWMNDPNGP+FYKGWYH FYQYNPN A+WGDIVWGHAVS+DLIHW HLP+AMVAD
Sbjct: 126 FQPEQNWMNDPNGPLFYKGWYHFFYQYNPNAAVWGDIVWGHAVSRDLIHWVHLPIAMVAD 185
Query: 184 QWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPV 243
QWYD GVWTGSAT LPDG ++MLYTGST+++VQVQNLAYP DP+DPLL+KWVK+PGNPV
Sbjct: 186 QWYDSNGVWTGSATFLPDGSIVMLYTGSTDKAVQVQNLAYPEDPNDPLLLKWVKFPGNPV 245
Query: 244 LVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLHG 303
LVPPPGI KDFRDPTTAW TSEGKWRI IGS++N+TGI+ VYDT DF YE L +LH
Sbjct: 246 LVPPPGILPKDFRDPTTAWKTSEGKWRITIGSKLNKTGISLVYDTIDFKTYEKLDTLLHR 305
Query: 304 VPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIGTYHEKNVTW 363
VPNTGMWECVDFYPVS T +GLDTS NGP VKH+VKASMDD R D+YA+GTY + N TW
Sbjct: 306 VPNTGMWECVDFYPVSKTAGNGLDTSVNGPDVKHIVKASMDDTRFDHYAVGTYFDSNGTW 365
Query: 364 VPDNPEIDVGI--GIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQ 421
+PD+P IDVG+ +RYDYG FYASK+FYDQNK RRVLW WIGESDSE +DV+KGW+SLQ
Sbjct: 366 IPDDPTIDVGMTASLRYDYGKFYASKSFYDQNKGRRVLWSWIGESDSEASDVQKGWSSLQ 425
Query: 422 GIPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVAE 481
GIPRTV LDTKTG NL+QWPVEE+ SLRL+SK+F +E+ PGSV+P+DVGSA QLDI AE
Sbjct: 426 GIPRTVVLDTKTGKNLVQWPVEEIKSLRLSSKQF-DLEVGPGSVVPVDVGSAAQLDIEAE 484
Query: 482 FELDKAALEK-------TAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYF 534
FE++K +L+K AE+ EFSC S GS RGALGPFG VLA +SLSEQTPVYF
Sbjct: 485 FEINKESLDKIIGNASVVAEAE-EFSCEKSGGSTVRGALGPFGFSVLATESLSEQTPVYF 543
Query: 535 YIAKGKDGSLKTYFCTDQSSTGRREILNESIGEHISCYCPNEHMYMLALSIESSQSIWNI 594
Y+AKGKD LKT+FCTD T R + N+ + P L + I
Sbjct: 544 YVAKGKDSELKTFFCTD---TSRSSVANDVVKPIYGSVVPVLKGEKLTMRI--------- 591
Query: 595 VYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMN 654
VDHSIVE F QGGRT ITSRVYPT AIYGAA++FLFNNA A+VT+S WQMN
Sbjct: 592 -----LVDHSIVEAFGQGGRTCITSRVYPTTAIYGAAKLFLFNNALDATVTASFTVWQMN 646
Query: 655 SAFIRPYPDD 664
SAFI PY D+
Sbjct: 647 SAFIHPYSDE 656
|
Possible role in the continued mobilization of sucrose to sink organs. Regulates root elongation. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q43348|INVA3_ARATH Acid beta-fructofuranosidase 3, vacuolar OS=Arabidopsis thaliana GN=BFRUCT3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 806 bits (2082), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/668 (61%), Positives = 480/668 (71%), Gaps = 64/668 (9%)
Query: 11 LPDGERPRPTRRRSIVLVLSGLLVVGFLVALL-SDNGSIAPANVIDNDNNNVNDNAKNGL 69
+P+ R RP + + V SGLL++ V L+ + +GS A
Sbjct: 25 IPETRRRRPIKVH--LAVYSGLLLIALYVTLIVTHDGSKA-------------------- 62
Query: 70 NDVSSSSKEPERLRPFTSASSAGVSEKSNRRF-----GSRTASYPWTNNMLSWQRTAFHF 124
++++ S RP AGVSEKSN + ++PW N +LSWQRTAFHF
Sbjct: 63 -EIATES------RP----RMAGVSEKSNDGVWISSDDGKVEAFPWNNTILSWQRTAFHF 111
Query: 125 QPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQ 184
QP+KNWMNDPNGP+FYKGWYH FYQYNPN A+WGDIVWGHAVSKDLIHW +LP+AMV DQ
Sbjct: 112 QPEKNWMNDPNGPLFYKGWYHFFYQYNPNAAVWGDIVWGHAVSKDLIHWLYLPIAMVPDQ 171
Query: 185 WYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVL 244
WYD GVWTGSAT L DG ++MLYTGST+E VQVQNLAYP DPSDPLL+KWVK+ GNPVL
Sbjct: 172 WYDANGVWTGSATFLDDGSIVMLYTGSTDEFVQVQNLAYPEDPSDPLLLKWVKFSGNPVL 231
Query: 245 VPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLHGV 304
VPPPGIGAKDFRDPTTAW TS GKWRI IGS+INRTGI+ +YDT DF YE +LH V
Sbjct: 232 VPPPGIGAKDFRDPTTAWKTSSGKWRITIGSKINRTGISLIYDTTDFKTYEKHETLLHQV 291
Query: 305 PNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIGTYHEKNVTWV 364
PNTGMWECVDFYPVS T +GLDTS NGP VKHV+KASMDD R D+YAIGTY + N TWV
Sbjct: 292 PNTGMWECVDFYPVSKTQLNGLDTSVNGPDVKHVIKASMDDTRIDHYAIGTYDDSNATWV 351
Query: 365 PDNPEIDVGI--GIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQG 422
PDNP IDVGI G+RYDYG +YASKTFYDQNK RR+LWGWIGESDSE ADV+KGW+S+QG
Sbjct: 352 PDNPSIDVGISTGLRYDYGKYYASKTFYDQNKGRRILWGWIGESDSEAADVQKGWSSVQG 411
Query: 423 IPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVAEF 482
IPRTV LDT+T NL+QWPVEE+ SLRL+SK+F + + PG+V+P+DVGSATQLDI AEF
Sbjct: 412 IPRTVVLDTRTHKNLVQWPVEEIKSLRLSSKKF-DMTIGPGTVVPVDVGSATQLDIEAEF 470
Query: 483 ELDK-----AALEKTAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIA 537
E+ + + E++ +FSC ++ GS RGALGPFG VLAD+ LSEQTPVYFY+
Sbjct: 471 EIKTDDLKLFFDDDSVEADNKFSCETNGGSTARGALGPFGFSVLADEGLSEQTPVYFYVT 530
Query: 538 KGKDGSLKTYFCTDQSSTGRREILNESIGEHISCYCPNEHMYMLALSIESSQSIWNIVYV 597
KGK L T FCTD T R + N+ + + P L + I
Sbjct: 531 KGKHSKLNTVFCTD---TSRSTLANDVVKPIYGSFVPVLKGEKLTMRI------------ 575
Query: 598 YLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNSAF 657
VDHSIVEGFAQGGR+ ITSRVYPTKAIYGA ++FLFNNA A+VT+S WQMN+AF
Sbjct: 576 --LVDHSIVEGFAQGGRSCITSRVYPTKAIYGATKLFLFNNAIDATVTASFTVWQMNNAF 633
Query: 658 IRPYPDDD 665
I PY DD
Sbjct: 634 IHPYSSDD 641
|
Possible role in the continued mobilization of sucrose to sink organs. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|P29000|INVA_SOLLC Acid beta-fructofuranosidase OS=Solanum lycopersicum GN=TIV1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/667 (57%), Positives = 484/667 (72%), Gaps = 45/667 (6%)
Query: 3 DSNVSYNPLPDGERPRPTRRRSIVLVLSGLLVVGFLVALLSDNGSIAPANVIDNDNNNVN 62
+S Y LPD +P R+S+ ++ SG+ + FL+ S+A +++N +
Sbjct: 10 NSASRYTLLPD--QPDSGHRKSLKII-SGIFLSVFLLL------SVAFFPILNNQSP--- 57
Query: 63 DNAKNGLNDVSSSSKEPERLRPFTSASSAGVSEKSNRRF-GSRTASYPWTNNMLSWQRTA 121
D+ S+ P P + S GVS+K+ R G+ SY W+N MLSWQRTA
Sbjct: 58 --------DLQIDSRSPA---PPSRGVSQGVSDKTFRDVAGASHVSYAWSNAMLSWQRTA 106
Query: 122 FHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMV 181
+HFQPQKNWMNDPNGP+++KGWYHLFYQYNP+ AIWG+I WGHAVSKDLIHW +LP AMV
Sbjct: 107 YHFQPQKNWMNDPNGPLYHKGWYHLFYQYNPDSAIWGNITWGHAVSKDLIHWLYLPFAMV 166
Query: 182 ADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGN 241
DQWYDI GVWTGSATILPDG++MMLYTG T++ VQVQNLAYPA+ SDPLL+ WVK+ GN
Sbjct: 167 PDQWYDINGVWTGSATILPDGQIMMLYTGDTDDYVQVQNLAYPANLSDPLLLDWVKFKGN 226
Query: 242 PVLVPPPGIGAKDFRDPTTAWLTSE-GKWRIAIGSRINRTGITFVYDTKDFINYELLRGV 300
PVLVPPPGIG KDFRDPTTAW + G+W + IGS+I +TG+ VY+T +F +++LL GV
Sbjct: 227 PVLVPPPGIGVKDFRDPTTAWTGPQNGQWLLTIGSKIGKTGVALVYETSNFTSFKLLDGV 286
Query: 301 LHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIGTYHEKN 360
LH VP TGMWECVDFYPVST +GLDTS+NGPGVKHV+KAS+DD++ D+YAIGTY
Sbjct: 287 LHAVPGTGMWECVDFYPVSTKKTNGLDTSYNGPGVKHVLKASLDDNKQDHYAIGTYDLGK 346
Query: 361 VTWVPDNPEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASL 420
W PDNPE+D GIG+R DYG +YASKTFYD K+RRVLWGWIGE+DSE AD++KGWAS+
Sbjct: 347 NKWTPDNPELDCGIGLRLDYGKYYASKTFYDPKKERRVLWGWIGETDSESADLQKGWASV 406
Query: 421 QGIPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVA 480
Q IPRTV D KTG++LLQWPVEE++SLR+ K+++L+PGS+ L V SA +LDI A
Sbjct: 407 QSIPRTVLYDKKTGTHLLQWPVEEIESLRVGDPTVKQVDLQPGSIELLRVDSAAELDIEA 466
Query: 481 EFELDKAALEKTAESN-VEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKG 539
FE+DK AL+ E++ V FSCS+S G+A RG LGPFG++V+AD +LSE TPVYFYI+KG
Sbjct: 467 SFEVDKVALQGIIEADHVGFSCSTSGGAASRGILGPFGVIVIADQTLSELTPVYFYISKG 526
Query: 540 KDGSLKTYFCTDQSSTGRREILNESI-GEHISCYCPNEHMYMLALSIESSQSIWNIVYVY 598
DG +T+FC DQ+ + + + + G + +H +
Sbjct: 527 ADGRAETHFCADQTRSSEAPGVGKQVYGSSVPVLDGEKHS------------------MR 568
Query: 599 LQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNSAFI 658
L VDHSIVE FAQGGRT ITSR+YPTKA+ GAAR+F+FNNATGASVT+S+K W + SA I
Sbjct: 569 LLVDHSIVESFAQGGRTVITSRIYPTKAVNGAARLFVFNNATGASVTASVKIWSLESANI 628
Query: 659 RPYPDDD 665
+ +P D
Sbjct: 629 QSFPLQD 635
|
Solanum lycopersicum (taxid: 4081) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|P93761|INV1_CAPAN Acid beta-fructofuranosidase AIV-18 OS=Capsicum annuum PE=2 SV=1 | Back alignment and function description |
|---|
Score = 739 bits (1907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/607 (59%), Positives = 448/607 (73%), Gaps = 29/607 (4%)
Query: 61 VNDNAKNGLNDVSSSSKEPERLRPFTSAS--SAGVSEKSNRRF-GSRTASYPWTNNMLSW 117
+N+ N N S+S E L P T + S GVSEK+ + G+ SY W+N ML+W
Sbjct: 54 LNNQPPNLQNKSPSAS---ETLTPATPSRGVSQGVSEKTFKDVSGTSQVSYTWSNAMLNW 110
Query: 118 QRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLP 177
QRTA+HFQPQKNWMNDPNGP+++KGWYHLFYQYNP+ AIWG+I WGHAVS DLIHW +LP
Sbjct: 111 QRTAYHFQPQKNWMNDPNGPLYHKGWYHLFYQYNPDSAIWGNITWGHAVSTDLIHWLYLP 170
Query: 178 LAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVK 237
AMV DQWYDI GVWTGSATILPDG +MMLYTG T++ VQVQNLAYPA+ SDPLL+ WVK
Sbjct: 171 FAMVPDQWYDINGVWTGSATILPDGLIMMLYTGDTDDYVQVQNLAYPANLSDPLLLDWVK 230
Query: 238 YPGNPVLVPPPGIGAKDFRDPTTAWLTSE-GKWRIAIGSRINRTGITFVYDTKDFINYEL 296
Y GNPVLVPPPGIG KDFRDPTTAW + G+W + IGS++ +TGI VY+T N++L
Sbjct: 231 YQGNPVLVPPPGIGVKDFRDPTTAWTGPQNGQWLLTIGSKVGKTGIALVYETS---NFKL 287
Query: 297 LRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIGTY 356
L GVLH VP TGMWECVDFYPVST +GLDTS+NGPG+KHV+KAS+DD++ D+Y IGTY
Sbjct: 288 LDGVLHAVPGTGMWECVDFYPVSTLDANGLDTSYNGPGIKHVLKASLDDNKQDHYVIGTY 347
Query: 357 HEKNVTWVPDNPEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKG 416
+ PDNP++D GIG+R DYG +YASKTFYD K+RRVLWGWIGE+DSE AD++KG
Sbjct: 348 DPVKNKFSPDNPDLDCGIGLRLDYGRYYASKTFYDPKKQRRVLWGWIGETDSESADLQKG 407
Query: 417 WASLQGIPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQL 476
WAS+Q IPRTV D KTG++LLQWPV E++SLR + K++ L+PGS+ L V SA Q
Sbjct: 408 WASVQSIPRTVLFDKKTGTHLLQWPVAEIESLRSGDPKVKEVNLQPGSIELLHVDSAAQF 467
Query: 477 DIVAEFELDKAALEKTAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYI 536
DI A FE+D+ LE E++V ++CS+S G+A RG LGPFG++V+AD +LSE TPVYFYI
Sbjct: 468 DIEASFEVDRVTLEGIIEADVGYNCSTSGGAASRGILGPFGVVVIADQTLSELTPVYFYI 527
Query: 537 AKGKDGSLKTYFCTDQSSTGRRE-ILNESIGEHISCYCPNEHMYMLALSIESSQSIWNIV 595
++G DG + +FC DQ+ + + + G + +H
Sbjct: 528 SRGADGRAEAHFCADQTRSSEAPGVAKQVYGSSVPVLDGEKHR----------------- 570
Query: 596 YVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNS 655
+ L VDHSIVE FAQGGRT ITSR+YPTKA+ GAAR+F+FNNATGA VT+SLK W + S
Sbjct: 571 -MRLLVDHSIVESFAQGGRTVITSRIYPTKAVNGAARLFVFNNATGAIVTASLKIWSLES 629
Query: 656 AFIRPYP 662
A IR +P
Sbjct: 630 ADIRSFP 636
|
Capsicum annuum (taxid: 4072) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|P49175|INV1_MAIZE Beta-fructofuranosidase 1 OS=Zea mays GN=IVR1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/586 (61%), Positives = 426/586 (72%), Gaps = 32/586 (5%)
Query: 92 GVSEKSNRRFGSRTA--SYPWTNNMLSWQRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQ 149
GVSEKS A + WTN ML+WQRTAFHFQP KNWMNDPNGP+++KGWYHLFYQ
Sbjct: 96 GVSEKSTAPLLGSGALQDFSWTNAMLAWQRTAFHFQPPKNWMNDPNGPLYHKGWYHLFYQ 155
Query: 150 YNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYT 209
+NP+ A+WG+I WGHAVS+DL+HW HLPLAMV D YD GVW+GSAT LPDG+++MLYT
Sbjct: 156 WNPDSAVWGNITWGHAVSRDLLHWLHLPLAMVPDHPYDANGVWSGSATRLPDGRIVMLYT 215
Query: 210 GSTNES-VQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGK 268
GST ES QVQNLA PAD SDPLL +WVK NPVLVPPPGIG DFRDPTTA T G
Sbjct: 216 GSTAESSAQVQNLAEPADASDPLLREWVKSDANPVLVPPPGIGPTDFRDPTTACRTPAGN 275
Query: 269 ---WRIAIGSR-INRTGITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEH 324
WR+AIGS+ + G+ VY T+DF+ Y+ ++H VP TGMWECVDFYPV+
Sbjct: 276 DTAWRVAIGSKDRDHAGLALVYRTEDFVRYDPAPALMHAVPGTGMWECVDFYPVAAGSGA 335
Query: 325 G------LDTSHN-GPGVKHVVKASMDDDRHDYYAIGTYHEKNVTWVPDNPEIDVGIGIR 377
L+TS GPGVKHV+KAS+DDD+HDYYAIGTY TW PD+ E DVGIG+R
Sbjct: 336 AAGSGDGLETSAAPGPGVKHVLKASLDDDKHDYYAIGTYDPATDTWTPDSAEDDVGIGLR 395
Query: 378 YDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQGIPRTVALDTKTGSNL 437
YDYG +YASKTFYD +RRVLWGW+GE+DSE AD+ KGWAS+Q IPRTV LDTKTGSNL
Sbjct: 396 YDYGKYYASKTFYDPVLRRRVLWGWVGETDSERADILKGWASVQSIPRTVLLDTKTGSNL 455
Query: 438 LQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVAEFELDKAALEKTAESNV 497
LQWPV EV++LR++ K F + L GSV+PLDVG ATQLDI A FE+D + E++V
Sbjct: 456 LQWPVVEVENLRMSGKSFDGVALDRGSVVPLDVGKATQLDIEAVFEVDASDAAGVTEADV 515
Query: 498 EFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSSTGR 557
F+CS+S G+A RG LGPFGLLVLADD LSEQT VYFY+ KG DGSL+T+FC D+ +
Sbjct: 516 TFNCSTSAGAAGRGLLGPFGLLVLADDDLSEQTAVYFYLLKGTDGSLQTFFCQDELRASK 575
Query: 558 REILNESIGEHISCYCPNEHMYMLALSIESSQSIWNIVYVYLQVDHSIVEGFAQGGRTTI 617
L + + + E++ V + VDHSIVE FAQGGRT I
Sbjct: 576 ANDLVKRVYGSLVPVLDGENL-----------------SVRILVDHSIVESFAQGGRTCI 618
Query: 618 TSRVYPTKAIYGAARVFLFNNATGASVTS-SLKAWQMNSAFIRPYP 662
TSRVYPT+AIY +ARVFLFNNAT A V + S+K WQ+NSA+IRPYP
Sbjct: 619 TSRVYPTRAIYDSARVFLFNNATHAHVKAKSVKIWQLNSAYIRPYP 664
|
Zea mays (taxid: 4577) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q5FC15|GFT_ASPOF 6(G)-fructosyltransferase OS=Asparagus officinalis GN=FT1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/588 (55%), Positives = 413/588 (70%), Gaps = 30/588 (5%)
Query: 87 SASSAGVSEKSNRRFGSRTASYPWTNNMLSWQRTAFHFQPQKNWMNDPNGPVFYKGWYHL 146
S SS S R GS Y WTN ML+WQR FHF+ KN+MNDP+GP++YKGWYHL
Sbjct: 36 SFSSRKSESGSGLRSGSVEPEYAWTNQMLTWQRAGFHFRTVKNYMNDPSGPMYYKGWYHL 95
Query: 147 FYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPD-GKLM 205
FYQ+NPN A WGDI WGHAVS+DL++W+HLP+A+ D+WYDI GVWTGS T++PD G+++
Sbjct: 96 FYQHNPNYAYWGDISWGHAVSRDLLNWFHLPVAVKPDRWYDIYGVWTGSITVMPDDGRVV 155
Query: 206 MLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPG-NPVLVPPPGIGAKDFRDPTTAWL- 263
MLYTG T E Q+ ++A ADPSDPLL++WVKY NPVL PPPGIG DFRDP W
Sbjct: 156 MLYTGGTKEKYQIMSVAMAADPSDPLLVEWVKYDEVNPVLRPPPGIGLTDFRDPNPIWYN 215
Query: 264 TSEGKWRIAIGSR---INRTGITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVST 320
T++ W++ IGS+ + TGI VY TKDFIN LL GVLH V + GMWECVD +PV++
Sbjct: 216 TTDSTWQLVIGSKNDSLQHTGIAMVYTTKDFINLTLLPGVLHSVDHVGMWECVDLFPVAS 275
Query: 321 TGE---HGLDTSHN-GPGVKHVVKASMDDDRHDYYAIGTYHEKNVTWVPDNPEIDVGIGI 376
+G GLD S VKHV+KASM+D+ HDYYAIG+Y WVPD+ +DVGIG+
Sbjct: 276 SGPLIGRGLDRSMMLADNVKHVLKASMNDEWHDYYAIGSYDVATHRWVPDDESVDVGIGM 335
Query: 377 RYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQGIPRTVALDTKTGSN 436
R D+G FYAS+TFYD K+RRV+WG++GE+DS ADV KGWAS QGIPRTV D KTG+N
Sbjct: 336 RIDWGKFYASRTFYDPVKERRVMWGYVGETDSGDADVAKGWASFQGIPRTVLFDVKTGTN 395
Query: 437 LLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVAEFELDKAALEKTAESN 496
+L WP+EEV+SLR+T K+F I + GS + L VG A QLDI AEFE+DK ALE E++
Sbjct: 396 VLTWPIEEVESLRMTRKDFSDIVVNKGSTVELHVGDANQLDIEAEFEMDKDALETAIEAD 455
Query: 497 VEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQ-SST 555
+ ++CSSS G+ RG LGPFGL VLA+ L+E T YFY+++ DGSL T+ C D+ S+
Sbjct: 456 IGYNCSSSGGAVSRGVLGPFGLFVLANQDLTELTATYFYVSRATDGSLHTHLCHDEMRSS 515
Query: 556 GRREILNESIGEHISCYCPNEHMYMLALSIESSQSIWNIVYVYLQVDHSIVEGFAQGGRT 615
+I+ +G + +L+L I VDHSIVE FAQGGRT
Sbjct: 516 KANDIVKRVVGGTFTVLDGE----LLSLRI--------------LVDHSIVESFAQGGRT 557
Query: 616 TITSRVYPTKAIYGAARVFLFNNATGASVTS-SLKAWQMNSAFIRPYP 662
+ TSRVYPT+AIY ARVFLFNNATGA++T+ ++K WQMNS + YP
Sbjct: 558 SATSRVYPTEAIYERARVFLFNNATGATITAKAVKVWQMNSTSNQYYP 605
|
Invloved in the synthesis of fructan of the inulin neoseries. Has no 1-FFT activity. Asparagus officinalis (taxid: 4686) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 3 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 704 | ||||||
| 115548293 | 687 | beta-fructofuranosidase [Citrus sinensis | 0.975 | 1.0 | 0.934 | 0.0 | |
| 18146714 | 687 | acid invertase [Citrus unshiu] | 0.975 | 1.0 | 0.934 | 0.0 | |
| 224071565 | 662 | predicted protein [Populus trichocarpa] | 0.896 | 0.953 | 0.682 | 0.0 | |
| 384371336 | 660 | vacuolar invertase [Manihot esculenta] | 0.896 | 0.956 | 0.684 | 0.0 | |
| 255583642 | 649 | Acid beta-fructofuranosidase precursor, | 0.892 | 0.967 | 0.674 | 0.0 | |
| 116744390 | 681 | soluble acid invertase [Pyrus pyrifolia | 0.913 | 0.944 | 0.660 | 0.0 | |
| 404435523 | 653 | vacuolar invertase [Manihot esculenta] | 0.811 | 0.874 | 0.712 | 0.0 | |
| 356495615 | 785 | PREDICTED: acid beta-fructofuranosidase- | 0.906 | 0.812 | 0.649 | 0.0 | |
| 124713 | 649 | RecName: Full=Acid beta-fructofuranosida | 0.901 | 0.978 | 0.640 | 0.0 | |
| 251831254 | 579 | acid invertase [Vigna radiata] | 0.806 | 0.981 | 0.691 | 0.0 |
| >gi|115548293|dbj|BAF34362.1| beta-fructofuranosidase [Citrus sinensis] | Back alignment and taxonomy information |
|---|
Score = 1288 bits (3334), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 658/704 (93%), Positives = 664/704 (94%), Gaps = 17/704 (2%)
Query: 1 MADSNVSYNPLPDGERPRPTRRRSIVLVLSGLLVVGFLVALLSDNGSIAPANVIDNDNNN 60
MADSNVSYNPLPDGERPRPTRRRSIVLVLSGLLVVGFLVALLSDNGSIAP NVIDNDNNN
Sbjct: 1 MADSNVSYNPLPDGERPRPTRRRSIVLVLSGLLVVGFLVALLSDNGSIAPTNVIDNDNNN 60
Query: 61 VNDNAKNGLNDVSSSSKEPERLRPFTSASSAGVSEKSNRRFGSRTASYPWTNNMLSWQRT 120
VNDNA+NGLNDVSSSSK+PERLRPFTSASSAGVSEKSNRRFG+RTASYPWTNNMLSWQRT
Sbjct: 61 VNDNAQNGLNDVSSSSKDPERLRPFTSASSAGVSEKSNRRFGARTASYPWTNNMLSWQRT 120
Query: 121 AFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAM 180
AFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAM
Sbjct: 121 AFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAM 180
Query: 181 VADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPG 240
VADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPG
Sbjct: 181 VADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPG 240
Query: 241 NPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGV 300
NPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGV
Sbjct: 241 NPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGV 300
Query: 301 LHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIGTYHEKN 360
LHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIGTYHEKN
Sbjct: 301 LHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIGTYHEKN 360
Query: 361 VTWVPDNPEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASL 420
VTWVPDNPEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASL
Sbjct: 361 VTWVPDNPEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASL 420
Query: 421 QGIPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVA 480
QGIPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVA
Sbjct: 421 QGIPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVA 480
Query: 481 EFELDKAALEKTAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGK 540
EFELDKAALEKTAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGK
Sbjct: 481 EFELDKAALEKTAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGK 540
Query: 541 DGSLKTYFCTDQSSTGRREILNESIGEHISCYCPNEHMYMLALSIESSQSIWNIVYVYLQ 600
DGSLKTYFCTDQS + +N+S E M L
Sbjct: 541 DGSLKTYFCTDQSRSSEANDVNKSKYGSFVPVLEGEKFSMRVL----------------- 583
Query: 601 VDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNSAFIRP 660
VDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNSAFIRP
Sbjct: 584 VDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNSAFIRP 643
Query: 661 YPDDDDERHSGTEPTYEVRGSKTKYLGNLLTSSLLFLNARNNFL 704
YPDDDDERHSGTEPTYEVRGSKTKYLGNLLTSSLLFLNARNNFL
Sbjct: 644 YPDDDDERHSGTEPTYEVRGSKTKYLGNLLTSSLLFLNARNNFL 687
|
Source: Citrus sinensis Species: Citrus sinensis Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18146714|dbj|BAB82419.1| acid invertase [Citrus unshiu] | Back alignment and taxonomy information |
|---|
Score = 1285 bits (3324), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 658/704 (93%), Positives = 663/704 (94%), Gaps = 17/704 (2%)
Query: 1 MADSNVSYNPLPDGERPRPTRRRSIVLVLSGLLVVGFLVALLSDNGSIAPANVIDNDNNN 60
MADSNVSYNPLPDGERPRPTRRRSIVLVLSGLLVVGFLVALLSDNGSI PANVIDNDNNN
Sbjct: 1 MADSNVSYNPLPDGERPRPTRRRSIVLVLSGLLVVGFLVALLSDNGSITPANVIDNDNNN 60
Query: 61 VNDNAKNGLNDVSSSSKEPERLRPFTSASSAGVSEKSNRRFGSRTASYPWTNNMLSWQRT 120
VNDNAKNGLNDVSSSSKEPERLRPFTSASSAGVSEKSNRRFGSRTASYPWTNNMLSWQRT
Sbjct: 61 VNDNAKNGLNDVSSSSKEPERLRPFTSASSAGVSEKSNRRFGSRTASYPWTNNMLSWQRT 120
Query: 121 AFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAM 180
AFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAM
Sbjct: 121 AFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAM 180
Query: 181 VADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPG 240
VADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPG
Sbjct: 181 VADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPG 240
Query: 241 NPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGV 300
NPVLVPPPGIG+KDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGV
Sbjct: 241 NPVLVPPPGIGSKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGV 300
Query: 301 LHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIGTYHEKN 360
LHGVPNTGMWECVDFYPVSTTGEHGLDTSHNG GVKHVVKASMDDDRHDYYAIGTYHEKN
Sbjct: 301 LHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGLGVKHVVKASMDDDRHDYYAIGTYHEKN 360
Query: 361 VTWVPDNPEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASL 420
VTWVPDNPEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASL
Sbjct: 361 VTWVPDNPEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASL 420
Query: 421 QGIPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVA 480
QGIPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVA
Sbjct: 421 QGIPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVA 480
Query: 481 EFELDKAALEKTAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGK 540
EFELDKAALEKTAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGK
Sbjct: 481 EFELDKAALEKTAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGK 540
Query: 541 DGSLKTYFCTDQSSTGRREILNESIGEHISCYCPNEHMYMLALSIESSQSIWNIVYVYLQ 600
DGSLKTYFCTDQS + +N+S E M L
Sbjct: 541 DGSLKTYFCTDQSRSSEANDVNKSKYGSFVPVLEGEKFSMRVL----------------- 583
Query: 601 VDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNSAFIRP 660
VDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNSAFIRP
Sbjct: 584 VDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNSAFIRP 643
Query: 661 YPDDDDERHSGTEPTYEVRGSKTKYLGNLLTSSLLFLNARNNFL 704
YPDDDDERHSGTEPT+EVRGSKTKYLGNLLTSSLLFLNARNNFL
Sbjct: 644 YPDDDDERHSGTEPTHEVRGSKTKYLGNLLTSSLLFLNARNNFL 687
|
Source: Citrus unshiu Species: Citrus unshiu Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224071565|ref|XP_002303519.1| predicted protein [Populus trichocarpa] gi|222840951|gb|EEE78498.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 926 bits (2392), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/671 (68%), Positives = 530/671 (78%), Gaps = 40/671 (5%)
Query: 7 SYNPLPDGER----PRPTRRRS---IVLVLSGLLVVGFLVALLSDNGSIAPANVIDNDNN 59
SY+P P+G P RRS ++ V SGLLVV ++A +++N N
Sbjct: 17 SYSPAPEGAVSAGCPATHLRRSKKVLIAVFSGLLVVSLILATINNN----------NGGR 66
Query: 60 NVNDNAKNGLNDVSSSSKE---PERLRP--FTSASSAGVSEKSNRRF-GSRTASYPWTNN 113
+V +++ + ++ KE PE L P ++ SAGVSEK+N G++ YPW N+
Sbjct: 67 HVQYHSQEDEDASLATPKEMAKPETLLPAGYSRGVSAGVSEKANVNLKGAQVKDYPWNNS 126
Query: 114 MLSWQRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHW 173
MLSWQRTAFHFQP++NWMNDPNGP++YKGWYH FYQYNP+ A+WGDIVWGHAVSKDLIHW
Sbjct: 127 MLSWQRTAFHFQPEENWMNDPNGPLYYKGWYHFFYQYNPHAAVWGDIVWGHAVSKDLIHW 186
Query: 174 YHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLI 233
HLPLAMVAD+WYD GVWTGSATILPDGK++MLYTGSTNESVQVQNLAYPAD DPLL+
Sbjct: 187 LHLPLAMVADKWYDKNGVWTGSATILPDGKIVMLYTGSTNESVQVQNLAYPADHDDPLLL 246
Query: 234 KWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFIN 293
KWVKY GNPVLVPPPGIGAKDFRDPTTAW TSEGKWRI IGS+IN+TGI VYDT+DFIN
Sbjct: 247 KWVKYSGNPVLVPPPGIGAKDFRDPTTAWKTSEGKWRIIIGSKINKTGIALVYDTEDFIN 306
Query: 294 YELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAI 353
YELL G+LHGVP TGMWECVDFYPVS TG++GLDTS NGP VKHV+K S+DDDRHDYYA+
Sbjct: 307 YELLSGILHGVPKTGMWECVDFYPVSKTGQNGLDTSVNGPQVKHVIKTSLDDDRHDYYAL 366
Query: 354 GTYHEKNVTWVPDNPEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADV 413
GTY +K W PDNPEIDVGIGIRYDYG+FYASKTFYDQ+K RRVLWGWIGESDSE+ADV
Sbjct: 367 GTYADKVGKWYPDNPEIDVGIGIRYDYGIFYASKTFYDQSKGRRVLWGWIGESDSEVADV 426
Query: 414 KKGWASLQGIPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSA 473
KKGWASLQGIPRTV LDTKTGSNLLQWPVEEV+SLRL SK F IE+K GS +PL++ A
Sbjct: 427 KKGWASLQGIPRTVVLDTKTGSNLLQWPVEEVESLRLKSKNFNNIEVKAGSAVPLELDGA 486
Query: 474 TQLDIVAEFELDKAALEKTAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVY 533
TQLDIVAEFELD+ A+E+TAESNVEFSCS++ G++ RGALGPFGLLVLADD L+E TPVY
Sbjct: 487 TQLDIVAEFELDRKAIERTAESNVEFSCSTNGGASHRGALGPFGLLVLADDDLTEYTPVY 546
Query: 534 FYIAKGKDGSLKTYFCTDQSSTGRREILNESIGEHISCYCPNEHMYMLALSIESSQSIWN 593
F++AKG +GSLKT+FCTDQS R + N+ E Y P L++ I
Sbjct: 547 FFVAKGNNGSLKTFFCTDQS---RSSVANDVRKEIYGSYVPVLEGEKLSVRI-------- 595
Query: 594 IVYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQM 653
VDHSI+E FAQGGRT ITSRVYPT+AIYG+AR+FLFNNAT A VTSSLK W M
Sbjct: 596 ------LVDHSIIESFAQGGRTCITSRVYPTRAIYGSARLFLFNNATEAGVTSSLKIWNM 649
Query: 654 NSAFIRPYPDD 664
NSAFIRPY ++
Sbjct: 650 NSAFIRPYSNE 660
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|384371336|gb|AFH77957.1| vacuolar invertase [Manihot esculenta] | Back alignment and taxonomy information |
|---|
Score = 925 bits (2390), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/668 (68%), Positives = 524/668 (78%), Gaps = 37/668 (5%)
Query: 7 SYNPLPDGERPR---PTR----RRSIVLVLSGLLVVGFLVALLSD-NGSIAPANVIDNDN 58
+Y LPDG P PT ++ ++ + SGL++V VAL+ + NGS N+ +
Sbjct: 17 TYTSLPDGTHPSGSPPTHCIPSKKLLLGIFSGLVMVFLFVALIGNRNGS--QLNIYPQQD 74
Query: 59 NNVNDNAKNGLNDVSSSSKEPERLRPFTSASSAGVSEKSNRRFG---SRTASYPWTNNML 115
NV A + + +PE LRP + SAGVSEK+N G S T YPW N+ML
Sbjct: 75 ENVVSLAS------PTETAKPETLRPISRGKSAGVSEKANLISGGSESSTDQYPWNNSML 128
Query: 116 SWQRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYH 175
SWQRTAFHFQP+KNWMNDPNGP+FYKGWYH FYQYNPN A+WGDIVWGHAVS+DLIHW H
Sbjct: 129 SWQRTAFHFQPEKNWMNDPNGPLFYKGWYHFFYQYNPNAAVWGDIVWGHAVSRDLIHWLH 188
Query: 176 LPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKW 235
LPLAMVADQWYD GVWTGSATILPDGK++MLYTGSTNESVQVQNLAYPADP+DPLL+ W
Sbjct: 189 LPLAMVADQWYDQNGVWTGSATILPDGKIVMLYTGSTNESVQVQNLAYPADPNDPLLLDW 248
Query: 236 VKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYE 295
VKY GNPVLVPPPGI KDFRDPTTAW TSEGKWRI+IGS+I +TGI +YDT+DFINY+
Sbjct: 249 VKYSGNPVLVPPPGIDTKDFRDPTTAWYTSEGKWRISIGSKIGKTGIALIYDTEDFINYK 308
Query: 296 LLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIGT 355
L LHGVP TGMWECVDFYPVS T ++G+DTS GP VKHVVKAS+DDDRHDYYA+GT
Sbjct: 309 LQPQALHGVPGTGMWECVDFYPVSRTSQNGVDTSATGPEVKHVVKASLDDDRHDYYALGT 368
Query: 356 YHEKNVTWVPDNPEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKK 415
Y+E TW PDNPEIDVGIG+RYDYG+FYASKTFYDQNK RRVLWGWIGESDSE+ADVKK
Sbjct: 369 YNEVTSTWTPDNPEIDVGIGLRYDYGIFYASKTFYDQNKGRRVLWGWIGESDSEVADVKK 428
Query: 416 GWASLQGIPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQ 475
GWASLQGIPRTV LDTKTGSNLLQWPVEEV+SLRL S EF K+E+KPGSV+PLD+ +ATQ
Sbjct: 429 GWASLQGIPRTVTLDTKTGSNLLQWPVEEVESLRLRSNEFNKVEVKPGSVVPLDLDAATQ 488
Query: 476 LDIVAEFELDKAALEKTAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFY 535
LDIVAEFELDK ALEKTAESN EFSC++S G+ R ALGPFGLLVLADDSL EQTPVYFY
Sbjct: 489 LDIVAEFELDKKALEKTAESNEEFSCTTSHGARHRNALGPFGLLVLADDSLVEQTPVYFY 548
Query: 536 IAKGKDGSLKTYFCTDQSSTGRREILNESIGEHISCYCPNEHMYMLALSIESSQSIWNIV 595
+ K +G+LKT+FCTDQS + +N+ I + E + L
Sbjct: 549 VQK-SNGTLKTFFCTDQSRSSAANDVNKQIYGNFVPVLEGEKFTLRVL------------ 595
Query: 596 YVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNS 655
VDHSI+E FAQGGRTTI+SRVYPT+AIYG+A++FLFNNA A VT+SLK WQMNS
Sbjct: 596 -----VDHSIIESFAQGGRTTISSRVYPTRAIYGSAKLFLFNNAIEADVTASLKIWQMNS 650
Query: 656 AFIRPYPD 663
AFIRPYP+
Sbjct: 651 AFIRPYPN 658
|
Source: Manihot esculenta Species: Manihot esculenta Genus: Manihot Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255583642|ref|XP_002532576.1| Acid beta-fructofuranosidase precursor, putative [Ricinus communis] gi|223527703|gb|EEF29810.1| Acid beta-fructofuranosidase precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/660 (67%), Positives = 511/660 (77%), Gaps = 32/660 (4%)
Query: 9 NPLPDGERPRPTRRRS----IVLVLSGLLVVGFLVALLSDNGSIAPANVIDNDNNNVNDN 64
+PLPDG P RR + +V SGL +V A++ +N NN++D+
Sbjct: 15 DPLPDGGSPPTAHRRQSKKMLFVVFSGLFLVFLFAAIIDNNKGF---------KNNIHDD 65
Query: 65 AKNGLNDVSSSSKEPERLRPFTSASSAGVSEKSNRRFGS-RTASYPWTNNMLSWQRTAFH 123
L +S + +PE LRP + SAG+SEK N S +T YPW N+MLSWQR+AFH
Sbjct: 66 NVIPLT-MSQETVKPEILRPVSRGVSAGISEKVNLISSSPQTPEYPWNNSMLSWQRSAFH 124
Query: 124 FQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVAD 183
FQP+KNWMNDPNGP+FY GWYH FYQYNPN A+WGDIVWGHAVSKDLIHW HLPLAMVAD
Sbjct: 125 FQPEKNWMNDPNGPLFYNGWYHFFYQYNPNAAVWGDIVWGHAVSKDLIHWLHLPLAMVAD 184
Query: 184 QWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPV 243
+WYD GVWTGSATILPDGK++MLYTGSTNESVQVQNLAYP D DPLL+KWVKY GNPV
Sbjct: 185 EWYDQNGVWTGSATILPDGKIVMLYTGSTNESVQVQNLAYPEDHDDPLLLKWVKYSGNPV 244
Query: 244 LVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLHG 303
LVPPPGI + DFRDPTTAW TSEGKWRI IGS++ RTGI +YDT+DFINYEL + LHG
Sbjct: 245 LVPPPGIKSLDFRDPTTAWFTSEGKWRITIGSKVGRTGIALIYDTEDFINYELQQHELHG 304
Query: 304 VPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIGTYHEKNVTW 363
V TGMWECVDFYPVS + +GLDTS NGP VKHV+K S+DDDRHDYYA+G Y+EKN TW
Sbjct: 305 VSGTGMWECVDFYPVSKSSANGLDTSANGPQVKHVLKTSLDDDRHDYYALGNYNEKNGTW 364
Query: 364 VPDNPEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQGI 423
PDNPEID GIGIRYDYG+FYASKTFYDQNK RR+LWGWIGESDSE ADVKKGWASLQ I
Sbjct: 365 YPDNPEIDTGIGIRYDYGIFYASKTFYDQNKGRRLLWGWIGESDSEAADVKKGWASLQSI 424
Query: 424 PRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVAEFE 483
PRTV LDTKTGSNLLQWPVEEV+SLRL S EF+K+E+KPGSV+PL + +ATQLDIVAEFE
Sbjct: 425 PRTVLLDTKTGSNLLQWPVEEVESLRLRSNEFEKLEVKPGSVVPLHIDAATQLDIVAEFE 484
Query: 484 LDKAALEKTAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGS 543
LDK L AESN EFSC +S G+A R ALGPFGLLVLAD+SL+EQTPVYFY+AKGK+G+
Sbjct: 485 LDKKVLANAAESNEEFSCKTSRGAAHRNALGPFGLLVLADESLAEQTPVYFYVAKGKNGT 544
Query: 544 LKTYFCTDQSSTGRREILNESIGEHISCYCPNEHMYMLALSIESSQSIWNIVYVYLQVDH 603
LKT+FCTDQ + +N+ I + E + L VDH
Sbjct: 545 LKTFFCTDQKRSSAANDVNKQIYGNFVPVLEGEKFSVRIL-----------------VDH 587
Query: 604 SIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNSAFIRPYPD 663
SI+E FAQGGRT ITSRVYPT+AIYGAA++FLFNNA A+VT+SLK WQMNSAFIRPYP+
Sbjct: 588 SIIESFAQGGRTCITSRVYPTRAIYGAAKLFLFNNALEANVTASLKIWQMNSAFIRPYPN 647
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|116744390|dbj|BAF35859.1| soluble acid invertase [Pyrus pyrifolia var. culta] gi|186397269|dbj|BAG30920.1| soluble acid invertase [Pyrus pyrifolia] | Back alignment and taxonomy information |
|---|
Score = 904 bits (2335), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/674 (66%), Positives = 520/674 (77%), Gaps = 31/674 (4%)
Query: 7 SYNPLPDGERPRPTRRRS---IVLVLSGLLVVGFLVALLSDNGSIAPANVIDNDNNNVND 63
+Y PLP+ + R+R ++ V SGLL++ LV ++S N +++ N
Sbjct: 18 TYTPLPNPDEASEIRKRQFKELLAVFSGLLMLSLLVVIISSG---------HNSDSHANK 68
Query: 64 NAKNGLNDVSSSSKEPERLRPFTSASSAGVSEKSNRRFGSRTA-SYPWTNNMLSWQRTAF 122
N L +++ P +LRP + +AGVSEKSNR + ++PW N+MLSWQRTAF
Sbjct: 69 NEPVFLAKEPYTTR-PAKLRPVSRGIAAGVSEKSNRLADAVDGPAFPWNNSMLSWQRTAF 127
Query: 123 HFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVA 182
HFQP+KNWMNDPNGP+FYKGWYH FYQ+NPNGA+WGDIVWGHAVSKDLIHW HLPLAMVA
Sbjct: 128 HFQPEKNWMNDPNGPLFYKGWYHFFYQWNPNGAVWGDIVWGHAVSKDLIHWLHLPLAMVA 187
Query: 183 DQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNP 242
DQWYDI GVWTGSATILPDGK++MLYTGSTNESVQVQNLAYPAD +DPLL KWVKY GNP
Sbjct: 188 DQWYDINGVWTGSATILPDGKIVMLYTGSTNESVQVQNLAYPADHNDPLLTKWVKYSGNP 247
Query: 243 VLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLH 302
+LVPPPGIG KDFRDPTTAW TS+GKWRI IGS++N+TGI+ VYDTKDF YE L GVLH
Sbjct: 248 ILVPPPGIGYKDFRDPTTAWYTSQGKWRITIGSKLNKTGISLVYDTKDFKTYEQLNGVLH 307
Query: 303 GVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIGTYHEKNVT 362
VP TGMWECVDFYPVS T + GLDTS NGP VKHVVKAS+DDDR+DYY++G+Y EK
Sbjct: 308 AVPGTGMWECVDFYPVSKTSDKGLDTSVNGPDVKHVVKASLDDDRNDYYSLGSYEEKTGK 367
Query: 363 WVPDNPEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQG 422
WVPDN +IDVGIGIRYDYG+FYASKTFYDQNK+RRVLWGWIGESDSE AD++KGWAS+QG
Sbjct: 368 WVPDNQKIDVGIGIRYDYGIFYASKTFYDQNKERRVLWGWIGESDSENADMQKGWASVQG 427
Query: 423 IPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVAEF 482
IPRTV D KTGSNL+QWPVEEV++LRL+ +F K+E+K GSV+PL V +ATQLDIVAEF
Sbjct: 428 IPRTVLFDKKTGSNLIQWPVEEVENLRLSITDFDKVEVKAGSVLPLQVVTATQLDIVAEF 487
Query: 483 ELDKAALEKTAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGKDG 542
ELDK LE AESN FSC++S G + RGALGPFGLLVLAD++LSEQTPVYFY+AKG G
Sbjct: 488 ELDKKVLESVAESNEVFSCNTSAGGSHRGALGPFGLLVLADETLSEQTPVYFYVAKGPGG 547
Query: 543 SLKTYFCTDQSSTGRREILNESIGEHISCYCPNEHMYMLALSIESSQSIWNIVYVYLQVD 602
+ T+FC DQ+ R + N+ + Y P L++ I VD
Sbjct: 548 NFDTFFCADQT---RSSVANDVKKKVTGSYVPVLKDEKLSVRI--------------LVD 590
Query: 603 HSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNSAFIRPYP 662
HSIVE FAQGGRTTIT+RVYPTKAIYGAAR+FLFNNAT SVT+SLK WQMNSAFIRPY
Sbjct: 591 HSIVESFAQGGRTTITTRVYPTKAIYGAARLFLFNNATEISVTASLKVWQMNSAFIRPYH 650
Query: 663 DDDDERHSGTEPTY 676
D+ S TY
Sbjct: 651 PDETSNASLNLVTY 664
|
Source: Pyrus pyrifolia var. culta Species: Pyrus pyrifolia Genus: Pyrus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|404435523|gb|AFR69121.1| vacuolar invertase [Manihot esculenta] | Back alignment and taxonomy information |
|---|
Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/591 (71%), Positives = 482/591 (81%), Gaps = 20/591 (3%)
Query: 76 SKEPERLRPFTSASSAGVSEKSNRRFGSRTA---SYPWTNNMLSWQRTAFHFQPQKNWMN 132
+ +PE LRP + SAGVSEK++ + YPW N+MLSWQRTAFHFQP+KNWMN
Sbjct: 78 TAKPETLRPISRGVSAGVSEKASLISSGSASSEEQYPWNNSMLSWQRTAFHFQPEKNWMN 137
Query: 133 DPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVW 192
DPNGP+FYKGWYH FYQYNPN A+WGDIVWGHAVS+DLIHW HLPLAMVA+QWYD GVW
Sbjct: 138 DPNGPLFYKGWYHFFYQYNPNAAVWGDIVWGHAVSRDLIHWLHLPLAMVANQWYDQNGVW 197
Query: 193 TGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGA 252
TGSATILPDG ++MLYTGSTNESVQVQNLAYPAD +DPLL++W KY GNPVLVPPPGI
Sbjct: 198 TGSATILPDGNIIMLYTGSTNESVQVQNLAYPADANDPLLLEWTKYSGNPVLVPPPGIDI 257
Query: 253 KDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLHGVPNTGMWEC 312
KDFRDPTTAW TSEGKWRI+IGS++ +TG+ +YDT+DFINY+L LHGVP TGMWEC
Sbjct: 258 KDFRDPTTAWYTSEGKWRISIGSKVGKTGVALIYDTEDFINYQLKSEALHGVPGTGMWEC 317
Query: 313 VDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIGTYHEKNVTWVPDNPEIDV 372
VDFYPVS +HGLDTS NGP VKHVVKAS+DDDRHDYYAIGTY E N W PDNP+IDV
Sbjct: 318 VDFYPVSKKYQHGLDTSDNGPDVKHVVKASLDDDRHDYYAIGTYDELNSKWTPDNPDIDV 377
Query: 373 GIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQGIPRTVALDTK 432
GIG+RYDYG+FYASKTFYD +K RRVLWGWIGESDSE+ADVKKGWA LQ IPRTV+LD K
Sbjct: 378 GIGLRYDYGIFYASKTFYDHHKGRRVLWGWIGESDSELADVKKGWACLQAIPRTVSLDKK 437
Query: 433 TGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVAEFELDKAALEKT 492
TGSNLLQWPVEEV++LRL ++EFKK+E++PGSV+PLD+ +ATQLDIVAEFELDK AL KT
Sbjct: 438 TGSNLLQWPVEEVENLRLRAREFKKVEVEPGSVVPLDLDAATQLDIVAEFELDKDALMKT 497
Query: 493 AESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQ 552
AES EFSC +S G+A R ALGPFGLLVLADDSL+EQTPVYFYI KG +G+ KT+FCTDQ
Sbjct: 498 AESTEEFSCKTSRGAAHRSALGPFGLLVLADDSLAEQTPVYFYINKGSNGTFKTFFCTDQ 557
Query: 553 SSTGRREILNESIGEHISCYCPNEHMYMLALSIESSQSIWNIVYVYLQVDHSIVEGFAQG 612
S + +N+ I + E + L VDHSI+E FAQG
Sbjct: 558 SRSSAANDVNKQIYGNFVPVLEGEKFTLRIL-----------------VDHSIIESFAQG 600
Query: 613 GRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNSAFIRPYPD 663
GRTTITSRVYPT+AIYG+A+VFLFNNA +VT+SLK WQMNSAFIRPYP+
Sbjct: 601 GRTTITSRVYPTRAIYGSAKVFLFNNAIETNVTASLKIWQMNSAFIRPYPN 651
|
Source: Manihot esculenta Species: Manihot esculenta Genus: Manihot Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356495615|ref|XP_003516670.1| PREDICTED: acid beta-fructofuranosidase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 888 bits (2294), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/671 (64%), Positives = 520/671 (77%), Gaps = 33/671 (4%)
Query: 7 SYNPLPDG-ERPRPTRRRSIVLVLSGLLVVGFLVALLSDNG-SIAPANVIDNDNNNVNDN 64
+Y P+PDG P RR ++++ GLLV LV+L++ NG S A +N D D+++ + +
Sbjct: 130 NYIPVPDGPHSPAEPARREVIVIFCGLLV---LVSLVAFNGYSWAHSNGHDGDHHHASSS 186
Query: 65 AKNGLNDVSSSSKE--PERL------RPFTSASSAGVSEKSNRRFGSRTA---SYPWTNN 113
L V+ + E P+ + + SAGVSEKS+ F S SYPW N+
Sbjct: 187 LPTTLLTVTPNELELSPDTVPWSTWQTTLSRGVSAGVSEKSSWLFNSNNGNGESYPWNNS 246
Query: 114 MLSWQRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHW 173
MLSWQRTA+HFQP+KNWMNDPNGP++YKGWYH FYQYNPNGA+WGDIVWGHAVS+D+IHW
Sbjct: 247 MLSWQRTAYHFQPEKNWMNDPNGPMYYKGWYHFFYQYNPNGAVWGDIVWGHAVSRDMIHW 306
Query: 174 YHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLI 233
+HLPLAMVADQWYD GVWTGSATILPDG+++MLYTGSTNES+QVQNLAYPADPSDPLL+
Sbjct: 307 FHLPLAMVADQWYDKNGVWTGSATILPDGQVIMLYTGSTNESMQVQNLAYPADPSDPLLV 366
Query: 234 KWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFIN 293
W+KYP NPVL PPPGI AKDFRDPTTAW+TSEGKWRI+IGS++N+TGI VYDT DF
Sbjct: 367 DWIKYPANPVLFPPPGIDAKDFRDPTTAWITSEGKWRISIGSKLNKTGIALVYDTNDFKT 426
Query: 294 YELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAI 353
+E + GVLH VP TGMWECVDF+PVS+ GE+GLDTS NG VKHVVK S+DDDRHDYYA+
Sbjct: 427 FERVEGVLHVVPGTGMWECVDFFPVSSKGENGLDTSINGENVKHVVKVSLDDDRHDYYAL 486
Query: 354 GTYHEKNVTWVPDNPEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADV 413
GTY EKNV + PD+ DVGIG+RYDYG+FYASKTFYDQ+K RRVLWGWIGESDSE ADV
Sbjct: 487 GTYDEKNVKFTPDDFNNDVGIGLRYDYGIFYASKTFYDQSKGRRVLWGWIGESDSEYADV 546
Query: 414 KKGWASLQGIPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSA 473
KGWAS+QGIPRTVALD KTGSNL+QWPV EV+SLRL S EF+ +++KPGSV+PL++G+A
Sbjct: 547 AKGWASVQGIPRTVALDKKTGSNLIQWPVAEVESLRLRSDEFQNLKVKPGSVVPLEIGTA 606
Query: 474 TQLDIVAEFELDKAALEKTAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVY 533
QLDIVAEFE+DK ALEKT +SN E+ CS+S GS ERG +GPFGLLVLADD LSE TP Y
Sbjct: 607 AQLDIVAEFEIDKKALEKTGQSNKEYKCSTSGGSTERGTIGPFGLLVLADDDLSEYTPTY 666
Query: 534 FYIAKGKDGSLKTYFCTDQSSTGRREILNESIGEHISCYCPNEHMYMLALSIESSQSIWN 593
FY+ KG G LKT FC+DQS + +++ I +E +
Sbjct: 667 FYVVKGSHGQLKTSFCSDQSRSSLATDVSKKIFGSFVPVLKDEKL--------------- 711
Query: 594 IVYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQM 653
V + VDHSIVE FAQGGRT +TSRVYPTKAIYGAAR+FLFNNAT A+VT+S+K WQM
Sbjct: 712 --SVRILVDHSIVESFAQGGRTCVTSRVYPTKAIYGAARLFLFNNATEATVTASVKVWQM 769
Query: 654 NSAFIRPYPDD 664
NSAFIRP+ D
Sbjct: 770 NSAFIRPFHPD 780
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|124713|sp|P29001.1|INVA_PHAAU RecName: Full=Acid beta-fructofuranosidase; AltName: Full=Acid invertase; Short=AI; AltName: Full=Acid sucrose hydrolase; AltName: Full=Vacuolar invertase; Contains: RecName: Full=Acid beta-fructofuranosidase 30 kDa subunit; Contains: RecName: Full=Acid beta-fructofuranosidase 38 kDa subunit; Flags: Precursor gi|218326|dbj|BAA01107.1| invertase [Vigna radiata] gi|384325|prf||1905412A acid invertase | Back alignment and taxonomy information |
|---|
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/664 (64%), Positives = 509/664 (76%), Gaps = 29/664 (4%)
Query: 11 LPDGERPRPTR--RRSIVLVLSGLLVVGFLVALLSDNGSIAPANVIDNDNNNVNDNAKNG 68
LP PT R+ ++ VL GLL + LVA S P + + +N + +
Sbjct: 8 LPTSSHAAPTSSTRKDLLFVLCGLLFLSSLVAYGGYRASGVPHAHLSSPTSNHQQDHQ-- 65
Query: 69 LNDVSSSSKEPERLRPFTSASSAGVSEKSNRRF----GSRTASYPWTNNMLSWQRTAFHF 124
S +S + P + S+GVSEKS+ G + ++PW N+MLSWQRT+FHF
Sbjct: 66 ----SPTSLPSSKWYPVSRGVSSGVSEKSSNLLFAGEGGASEAFPWDNSMLSWQRTSFHF 121
Query: 125 QPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQ 184
QP+KNWMNDPNGP++YKGWYH FYQYNPNGA+WGDIVWGHAVS+D+IHW HLPLAMVADQ
Sbjct: 122 QPEKNWMNDPNGPMYYKGWYHFFYQYNPNGAVWGDIVWGHAVSRDMIHWLHLPLAMVADQ 181
Query: 185 WYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVL 244
WYD GVWTGSATILP+G+++MLYTGSTNESVQVQNLAYPADPSDPLL+ W+K+ GNPVL
Sbjct: 182 WYDKQGVWTGSATILPNGEIIMLYTGSTNESVQVQNLAYPADPSDPLLLDWIKHTGNPVL 241
Query: 245 VPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLHGV 304
VPPPGIGAKDFRDPTTAWLTSEGKWRI IGS++N+TGI VYDT+DF YEL G+L V
Sbjct: 242 VPPPGIGAKDFRDPTTAWLTSEGKWRITIGSKLNKTGIALVYDTEDFKTYELKEGLLRAV 301
Query: 305 PNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIGTYHEKNVTWV 364
P TGMWECVDF+PVS +GLDTS NG VKHV+K S+DDDRHDYYAIGTY + V +
Sbjct: 302 PGTGMWECVDFFPVSKKNGNGLDTSVNGAEVKHVMKVSLDDDRHDYYAIGTYDDNKVLFT 361
Query: 365 PDNPEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQGIP 424
PD+ + DVG+G+RYDYG+FYASKTFYDQNK RR+LWGWIGESDSE ADV KGWAS+Q IP
Sbjct: 362 PDDVKNDVGVGLRYDYGIFYASKTFYDQNKDRRILWGWIGESDSEYADVTKGWASVQSIP 421
Query: 425 RTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVAEFEL 484
RTV LDTKTGSNLLQWPV+EV+SLRL S EFK ++ KPGSV+ LD+ +ATQLD+VAEFE+
Sbjct: 422 RTVRLDTKTGSNLLQWPVDEVESLRLRSDEFKSLKAKPGSVVSLDIETATQLDVVAEFEI 481
Query: 485 DKAALEKTAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSL 544
D +LEKTAESN EF+CSSS G+A+RGALGPFGLLVLAD+ LSE TPVYFY+ KG++G+L
Sbjct: 482 DTESLEKTAESNEEFTCSSSGGAAQRGALGPFGLLVLADEGLSEYTPVYFYVIKGRNGNL 541
Query: 545 KTYFCTDQSSTGRREILNESIGEHISCYCPNEHMYMLALSIESSQSIWNIVYVYLQVDHS 604
+T FC+DQS + + + + I + E + L VDHS
Sbjct: 542 RTSFCSDQSRSSQANDVRKQIFGSVVPVLKGEKFSLRML-----------------VDHS 584
Query: 605 IVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNSAFIRPYPDD 664
IVE FAQGGRT +TSRVYPTKAIYGAAR+FLFNNAT A+VT+SLK WQMNSAFIRP+P +
Sbjct: 585 IVESFAQGGRTCVTSRVYPTKAIYGAARLFLFNNATEATVTASLKVWQMNSAFIRPFPFN 644
Query: 665 DDER 668
D++
Sbjct: 645 PDQK 648
|
Source: Vigna radiata Species: Vigna radiata Genus: Vigna Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|251831254|gb|ACT21538.1| acid invertase [Vigna radiata] | Back alignment and taxonomy information |
|---|
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/589 (69%), Positives = 480/589 (81%), Gaps = 21/589 (3%)
Query: 84 PFTSASSAGVSEKSNRRF----GSRTASYPWTNNMLSWQRTAFHFQPQKNWMNDPNGPVF 139
P + S+GVSEKS+ G + ++PW N+MLSWQRT+FHFQP+KNWMNDPNGP++
Sbjct: 7 PVSRGVSSGVSEKSSNLLFAGEGGASEAFPWDNSMLSWQRTSFHFQPEKNWMNDPNGPMY 66
Query: 140 YKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATIL 199
YKGWYH FYQYNPNGA+WGDIVWGHAVS+D+IHW HLPLAMVADQWYD GVWTGSATIL
Sbjct: 67 YKGWYHFFYQYNPNGAVWGDIVWGHAVSRDMIHWLHLPLAMVADQWYDKQGVWTGSATIL 126
Query: 200 PDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPT 259
P+G+++MLYTGSTNESVQVQNLAYPADPSDPLL+ W+K+ GNPVLVPPPGIGAKDFRDPT
Sbjct: 127 PNGEIIMLYTGSTNESVQVQNLAYPADPSDPLLLDWIKHTGNPVLVPPPGIGAKDFRDPT 186
Query: 260 TAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVS 319
TAWLTSEGKWRI IGS++N+TGI VYDT+DF YEL G+L VP TGMWECVDF+PVS
Sbjct: 187 TAWLTSEGKWRITIGSKLNKTGIALVYDTEDFKTYELKEGLLRAVPGTGMWECVDFFPVS 246
Query: 320 TTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIGTYHEKNVTWVPDNPEIDVGIGIRYD 379
+GLDTS NG VKHV+K S+DDDRHDYYAIGTY + V + PD+ + DVG+G+RYD
Sbjct: 247 KKNGNGLDTSVNGAEVKHVMKVSLDDDRHDYYAIGTYDDNKVLFTPDDVKNDVGVGLRYD 306
Query: 380 YGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQGIPRTVALDTKTGSNLLQ 439
YG+FYASKTFYDQNK RR+LWGWIGESDSE ADV KGWAS+Q IPRTV LDTKTGSNLLQ
Sbjct: 307 YGIFYASKTFYDQNKDRRILWGWIGESDSEYADVTKGWASVQSIPRTVRLDTKTGSNLLQ 366
Query: 440 WPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVAEFELDKAALEKTAESNVEF 499
WPV+EV+SLRL S EFK ++ KPGSV+ LD+ +ATQLD+VAEFE+D +LEKTAESN EF
Sbjct: 367 WPVDEVESLRLRSDEFKSLKAKPGSVVSLDIETATQLDVVAEFEIDTESLEKTAESNEEF 426
Query: 500 SCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSSTGRRE 559
+CSSS G+A+RGALGPFGLLVLAD+ LSE TPVYFY+ KG++G+L+T FC+DQS + +
Sbjct: 427 TCSSSGGAAQRGALGPFGLLVLADEGLSEYTPVYFYVIKGRNGNLRTSFCSDQSRSSQAN 486
Query: 560 ILNESIGEHISCYCPNEHMYMLALSIESSQSIWNIVYVYLQVDHSIVEGFAQGGRTTITS 619
+ + I + E + L VDHSIVE FAQGGRT +TS
Sbjct: 487 DVRKQIFGSVVPVLKGEKFSLRML-----------------VDHSIVESFAQGGRTCVTS 529
Query: 620 RVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNSAFIRPYPDDDDER 668
RVYPTKAIYGAAR+FLFNNAT A+VT+SLK WQMNSAFIRP+P + D++
Sbjct: 530 RVYPTKAIYGAARLFLFNNATEATVTASLKVWQMNSAFIRPFPFNPDQK 578
|
Source: Vigna radiata Species: Vigna radiata Genus: Vigna Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 704 | ||||||
| TAIR|locus:2201966 | 664 | ATBETAFRUCT4 [Arabidopsis thal | 0.812 | 0.861 | 0.660 | 3.1e-218 | |
| TAIR|locus:2026177 | 648 | AT1G62660 [Arabidopsis thalian | 0.791 | 0.859 | 0.667 | 1.7e-215 | |
| UNIPROTKB|Q9FSV7 | 654 | 1-SST "Sucrose:sucrose 1-fruct | 0.795 | 0.856 | 0.534 | 4.2e-166 | |
| TAIR|locus:2091606 | 584 | ATBFRUCT1 [Arabidopsis thalian | 0.737 | 0.888 | 0.461 | 8.3e-122 | |
| TAIR|locus:2049445 | 591 | cwINV4 "cell wall invertase 4" | 0.745 | 0.888 | 0.429 | 1.4e-119 | |
| TAIR|locus:2205677 | 594 | FRUCT5 "beta-fructofuranosidas | 0.741 | 0.878 | 0.450 | 2e-118 | |
| TAIR|locus:2079944 | 590 | CWINV2 "cell wall invertase 2" | 0.744 | 0.888 | 0.421 | 5.4e-118 | |
| TAIR|locus:2143099 | 550 | cwINV6 "6-&1-fructan exohydrol | 0.741 | 0.949 | 0.411 | 2.4e-108 | |
| UNIPROTKB|Q4KBP1 | 499 | scrB "Sucrose-6-phosphate hydr | 0.470 | 0.663 | 0.305 | 2.1e-41 | |
| TIGR_CMR|BA_0753 | 491 | BA_0753 "sucrose-6-phosphate h | 0.421 | 0.604 | 0.324 | 8.5e-39 |
| TAIR|locus:2201966 ATBETAFRUCT4 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2108 (747.1 bits), Expect = 3.1e-218, P = 3.1e-218
Identities = 400/606 (66%), Positives = 471/606 (77%)
Query: 74 SSSKEPERLRPFTS-ASSAGVSEKSN----RRFGSR-TASYPWTNNMLSWQRTAFHFQPQ 127
S+ + + TS A AGVSEK N + G R T ++ W N+MLSWQRTAFHFQP+
Sbjct: 70 SNDEGIDETETITSRARLAGVSEKRNDGLWKLSGDRNTPAFEWNNSMLSWQRTAFHFQPE 129
Query: 128 KNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYD 187
+NWMNDPNGP+FYKGWYH FYQYNPN A+WGDIVWGHAVS+DLIHW HLP+AMVADQWYD
Sbjct: 130 QNWMNDPNGPLFYKGWYHFFYQYNPNAAVWGDIVWGHAVSRDLIHWVHLPIAMVADQWYD 189
Query: 188 IMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPP 247
GVWTGSAT LPDG ++MLYTGST+++VQVQNLAYP DP+DPLL+KWVK+PGNPVLVPP
Sbjct: 190 SNGVWTGSATFLPDGSIVMLYTGSTDKAVQVQNLAYPEDPNDPLLLKWVKFPGNPVLVPP 249
Query: 248 PGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLHGVPNT 307
PGI KDFRDPTTAW TSEGKWRI IGS++N+TGI+ VYDT DF YE L +LH VPNT
Sbjct: 250 PGILPKDFRDPTTAWKTSEGKWRITIGSKLNKTGISLVYDTIDFKTYEKLDTLLHRVPNT 309
Query: 308 GMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIGTYHEKNVTWVPDN 367
GMWECVDFYPVS T +GLDTS NGP VKH+VKASMDD R D+YA+GTY + N TW+PD+
Sbjct: 310 GMWECVDFYPVSKTAGNGLDTSVNGPDVKHIVKASMDDTRFDHYAVGTYFDSNGTWIPDD 369
Query: 368 PEIDVGI--GIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQGIPR 425
P IDVG+ +RYDYG FYASK+FYDQNK RRVLW WIGESDSE +DV+KGW+SLQGIPR
Sbjct: 370 PTIDVGMTASLRYDYGKFYASKSFYDQNKGRRVLWSWIGESDSEASDVQKGWSSLQGIPR 429
Query: 426 TVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVAEFELD 485
TV LDTKTG NL+QWPVEE+ SLRL+SK+F +E+ PGSV+P+DVGSA QLDI AEFE++
Sbjct: 430 TVVLDTKTGKNLVQWPVEEIKSLRLSSKQFD-LEVGPGSVVPVDVGSAAQLDIEAEFEIN 488
Query: 486 KAALEK-------TAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAK 538
K +L+K AE+ EFSC S GS RGALGPFG VLA +SLSEQTPVYFY+AK
Sbjct: 489 KESLDKIIGNASVVAEAE-EFSCEKSGGSTVRGALGPFGFSVLATESLSEQTPVYFYVAK 547
Query: 539 GKDGSLKTYFCTDQSSTGRREILNESIGEHISCYCPNEHMYMLALSIESSQSIWNIVYVY 598
GKD LKT+FCTD T R + N+ + + +Y + + + + +
Sbjct: 548 GKDSELKTFFCTD---TSRSSVANDVV----------KPIYGSVVPVLKGEKLT----MR 590
Query: 599 LQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNSAFI 658
+ VDHSIVE F QGGRT ITSRVYPT AIYGAA++FLFNNA A+VT+S WQMNSAFI
Sbjct: 591 ILVDHSIVEAFGQGGRTCITSRVYPTTAIYGAAKLFLFNNALDATVTASFTVWQMNSAFI 650
Query: 659 RPYPDD 664
PY D+
Sbjct: 651 HPYSDE 656
|
|
| TAIR|locus:2026177 AT1G62660 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2082 (738.0 bits), Expect = 1.7e-215, P = 1.7e-215
Identities = 392/587 (66%), Positives = 454/587 (77%)
Query: 91 AGVSEKSNRRF-----GSRTASYPWTNNMLSWQRTAFHFQPQKNWMNDPNGPVFYKGWYH 145
AGVSEKSN + ++PW N +LSWQRTAFHFQP+KNWMNDPNGP+FYKGWYH
Sbjct: 73 AGVSEKSNDGVWISSDDGKVEAFPWNNTILSWQRTAFHFQPEKNWMNDPNGPLFYKGWYH 132
Query: 146 LFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLM 205
FYQYNPN A+WGDIVWGHAVSKDLIHW +LP+AMV DQWYD GVWTGSAT L DG ++
Sbjct: 133 FFYQYNPNAAVWGDIVWGHAVSKDLIHWLYLPIAMVPDQWYDANGVWTGSATFLDDGSIV 192
Query: 206 MLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTS 265
MLYTGST+E VQVQNLAYP DPSDPLL+KWVK+ GNPVLVPPPGIGAKDFRDPTTAW TS
Sbjct: 193 MLYTGSTDEFVQVQNLAYPEDPSDPLLLKWVKFSGNPVLVPPPGIGAKDFRDPTTAWKTS 252
Query: 266 EGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHG 325
GKWRI IGS+INRTGI+ +YDT DF YE +LH VPNTGMWECVDFYPVS T +G
Sbjct: 253 SGKWRITIGSKINRTGISLIYDTTDFKTYEKHETLLHQVPNTGMWECVDFYPVSKTQLNG 312
Query: 326 LDTSHNGPGVKHVVKASMDDDRHDYYAIGTYHEKNVTWVPDNPEIDVGI--GIRYDYGLF 383
LDTS NGP VKHV+KASMDD R D+YAIGTY + N TWVPDNP IDVGI G+RYDYG +
Sbjct: 313 LDTSVNGPDVKHVIKASMDDTRIDHYAIGTYDDSNATWVPDNPSIDVGISTGLRYDYGKY 372
Query: 384 YASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQGIPRTVALDTKTGSNLLQWPVE 443
YASKTFYDQNK RR+LWGWIGESDSE ADV+KGW+S+QGIPRTV LDT+T NL+QWPVE
Sbjct: 373 YASKTFYDQNKGRRILWGWIGESDSEAADVQKGWSSVQGIPRTVVLDTRTHKNLVQWPVE 432
Query: 444 EVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVAEFEL--DKAAL---EKTAESNVE 498
E+ SLRL+SK+F + + PG+V+P+DVGSATQLDI AEFE+ D L + + E++ +
Sbjct: 433 EIKSLRLSSKKFD-MTIGPGTVVPVDVGSATQLDIEAEFEIKTDDLKLFFDDDSVEADNK 491
Query: 499 FSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSSTGRR 558
FSC ++ GS RGALGPFG VLAD+ LSEQTPVYFY+ KGK L T FCTD T R
Sbjct: 492 FSCETNGGSTARGALGPFGFSVLADEGLSEQTPVYFYVTKGKHSKLNTVFCTD---TSRS 548
Query: 559 EILNESIGEHISCYCPNEHMYMLALSIESSQSIWNIVYVYLQVDHSIVEGFAQGGRTTIT 618
+ N+ + + P ++ + I+ VDHSIVEGFAQGGR+ IT
Sbjct: 549 TLANDVVKPIYGSFVP---------VLKGEKLTMRIL-----VDHSIVEGFAQGGRSCIT 594
Query: 619 SRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNSAFIRPYPDDD 665
SRVYPTKAIYGA ++FLFNNA A+VT+S WQMN+AFI PY DD
Sbjct: 595 SRVYPTKAIYGATKLFLFNNAIDATVTASFTVWQMNNAFIHPYSSDD 641
|
|
| UNIPROTKB|Q9FSV7 1-SST "Sucrose:sucrose 1-fructosyltransferase" [Festuca arundinacea (taxid:4606)] | Back alignment and assigned GO terms |
|---|
Score = 1616 (573.9 bits), Expect = 4.2e-166, P = 4.2e-166
Identities = 314/588 (53%), Positives = 410/588 (69%)
Query: 84 PFTSASSAGVSEKSNRRFGSRTASYPWTNNMLSWQRTAFHFQPQKNWMNDPNGPVFYKGW 143
P + GVSEK++ + S +PW+N ML WQRT FHFQP+K++MNDPNGPV+Y GW
Sbjct: 88 PRSRGKDFGVSEKASGAY-SADGGFPWSNAMLQWQRTGFHFQPEKHYMNDPNGPVYYGGW 146
Query: 144 YHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGK 203
YHLFYQYNP G WG+I W HAVSKD+++W HLPLAMV DQWYD GV TGS T+LPDG+
Sbjct: 147 YHLFYQYNPKGDSWGNIAWAHAVSKDMVNWRHLPLAMVPDQWYDSNGVLTGSITVLPDGQ 206
Query: 204 LMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWL 263
+++LYTG+T+ QVQ LA PADPSDPLL +W+K+P NP+L PPPGIG KDFRDP TAW
Sbjct: 207 VILLYTGNTDTLAQVQCLATPADPSDPLLREWIKHPANPILYPPPGIGLKDFRDPLTAWF 266
Query: 264 T-SEGKWRIAIGSRIN--RTGITFVYDTKDFINYELLRGVLHGVPN-TGMWECVDFYPVS 319
S+ WR IGS+ + GI Y TKDF+NYEL+ G +H P+ TGM+EC+D YPV
Sbjct: 267 DHSDNTWRTVIGSKDDDGHAGIILSYKTKDFVNYELMPGNMHRGPDGTGMYECIDLYPVG 326
Query: 320 TTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIGTYHEKNVTWVPDNPEIDVGIGIRYD 379
L + P V V+K S DD+RHDYYA+G + W P + E+D+GIG+RYD
Sbjct: 327 GNSSEMLG-GDDSPDVLFVLKESSDDERHDYYALGRFDAAANIWTPIDQELDLGIGLRYD 385
Query: 380 YGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQGIPRTVALDTKTGSNLLQ 439
+G +YASK+FYDQ K RR++W +IGE+DSE AD+ KGWA+L IPRTV LD KT +NL+Q
Sbjct: 386 WGKYYASKSFYDQKKNRRIVWAYIGETDSEQADITKGWANLMTIPRTVELDKKTRTNLIQ 445
Query: 440 WPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVAEFELDKAALEKTAESNVEF 499
WPVEE+D+LR S + I + GSV+ L + Q+DI A F+L+ + ++ E++V +
Sbjct: 446 WPVEELDTLRRNSTDLSGITVDAGSVIRLPLHQGAQIDIEASFQLNSSDVDALTEADVSY 505
Query: 500 SCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQS-STGRR 558
+CS+S G+A RGALGPFGLLVLA+ +EQT VYFY++KG DG+L+T+FC D+S ST +
Sbjct: 506 NCSTS-GAAVRGALGPFGLLVLANGR-TEQTAVYFYVSKGVDGALQTHFCHDESRSTQAK 563
Query: 559 EILNESIGEHISCYCPNEHMYMLALSIESSQSIWNIVYVYLQVDHSIVEGFAQGGRTTIT 618
+++N IG + P L E+ V + VDHSIV+ FA GGR T T
Sbjct: 564 DVVNRMIGSIV----P-------VLDGETFS-------VRVLVDHSIVQSFAMGGRITAT 605
Query: 619 SRVYPTKAIYGAARVFLFNNATGASVTSS-LKAWQMNSAFIRPYPDDD 665
SR YPT+AIY AA V+LFNNATGA+VT+ L ++M SA + +DD
Sbjct: 606 SRAYPTEAIYAAAGVYLFNNATGATVTAERLVVYEMASADNHIFTNDD 653
|
|
| TAIR|locus:2091606 ATBFRUCT1 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1198 (426.8 bits), Expect = 8.3e-122, P = 8.3e-122
Identities = 255/553 (46%), Positives = 341/553 (61%)
Query: 119 RTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPL 178
RT FHFQP KNWMNDPNGP+ YKG YHLFYQ+NP GA+WG+IVW H+ S DLI+W P
Sbjct: 52 RTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPP 111
Query: 179 AMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKY 238
A+ +DI G W+GSATILP+GK ++LYTG ++ QVQN+A P + SDP L +W K
Sbjct: 112 AIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKS 171
Query: 239 PGNPVLVPPP--GIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYEL 296
P NP++ P GI A FRDPTTAWL + KWR+ IGS+I+R G+ Y +KDF+ +E
Sbjct: 172 PLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEK 231
Query: 297 LRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNG-PG--VKHVVKASMDDDRHDYYAI 353
LH +GMWEC DF+PV+ G +G++TS G P +KHV+K S+DD +HDYY I
Sbjct: 232 SPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTI 291
Query: 354 GTYHEKNVTWVPDNP-EIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIAD 412
GTY +VPDN ++D G RYDYG +YASKTF+D K RR+LWGW ES S D
Sbjct: 292 GTYDRVKDKFVPDNGFKMD-GTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDD 350
Query: 413 VKKGWASLQGIPRTVALDTKTGSNLLQWPVEEVDSLRLTS-KEFKKIELKPGSVMPLDVG 471
V+KGW+ +Q IPR + LD ++G L+QWPV EV+ LR K + LK GS + +
Sbjct: 351 VEKGWSGIQTIPRKIWLD-RSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGV 409
Query: 472 SATQLDIVAEF---ELDKAALEKTAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSE 528
+A Q D+ F +L+KA + + + ++ + CS S + G LGPFGL+VLA +L E
Sbjct: 410 TAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSG-LGPFGLMVLASKNLEE 468
Query: 529 QTPVYFYIAKGKDGSLK--TYFCTDQSSTGRREILNESI-GEHISCYCPNEHMYMLALSI 585
T VYF I K + S K C+DQS + +E +++ G + P++ + + AL
Sbjct: 469 YTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDIN-PHQPLSLRAL-- 525
Query: 586 ESSQSIWNIVYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVT 645
+DHS+VE F GR ITSRVYP AI ++ +F FN +
Sbjct: 526 ---------------IDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDV 570
Query: 646 SSLKAWQMNSAFI 658
+L AW MNSA I
Sbjct: 571 LNLNAWSMNSAQI 583
|
|
| TAIR|locus:2049445 cwINV4 "cell wall invertase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1177 (419.4 bits), Expect = 1.4e-119, P = 1.4e-119
Identities = 233/543 (42%), Positives = 320/543 (58%)
Query: 119 RTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPL 178
R +FHFQP K+W+NDPNGPV+YKG YHLFYQYN GA+WG+I+W H+VSKDL++W L
Sbjct: 50 RPSFHFQPPKHWINDPNGPVYYKGLYHLFYQYNTKGAVWGNIIWAHSVSKDLVNWEALEP 109
Query: 179 AMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKY 238
A+ +W+DI G W+GS TI+P ++LYTG Q+QN A P DPSDP L KW+K
Sbjct: 110 ALSPSKWFDIGGTWSGSITIVPGKGPIILYTGVNQNETQLQNYAIPEDPSDPYLRKWIKP 169
Query: 239 PGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLR 298
NP+ +P + FRDPTTAW + +G WR +GS+ R GI ++Y ++DF ++ +
Sbjct: 170 DDNPIAIPDYTMNGSAFRDPTTAWFSKDGHWRTVVGSKRKRRGIAYIYRSRDFKHWVKAK 229
Query: 299 GVLHGVPNTGMWECVDFYPVSTTG-EHGLDTSHNGPGVKHVVKASMDDDRHDYYAIGTYH 357
+H +TGMWEC DF+PVS T +GLD + GP KHV+K S+D R++YY +G Y
Sbjct: 230 HPVHSKQSTGMWECPDFFPVSLTDFRNGLDLDYVGPNTKHVLKVSLDITRYEYYTLGKYD 289
Query: 358 EKNVTWVPDNPEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGW 417
K ++PD D G+R+DYG FYASKTF+D K RR+LWGW ESD+ D+ KGW
Sbjct: 290 LKKDRYIPDGNTPDGWEGLRFDYGNFYASKTFFDYKKNRRILWGWANESDTVEDDILKGW 349
Query: 418 ASLQGIPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLD 477
A LQ IPRTV LD+ L+ WPVEE++SLR ++K G + + + Q D
Sbjct: 350 AGLQVIPRTVLLDSSK-KQLVFWPVEEIESLRGNYVRMNNHDIKMGQRIEVKGITPAQAD 408
Query: 478 IVAEF---ELDKAALEKTAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYF 534
+ F L+KA + + + + +GS RG +GPFGL+ LA L E TPV+F
Sbjct: 409 VEVTFYVGSLEKAEIFDPSFTWKPLELCNIKGSNVRGGVGPFGLITLATPDLEEYTPVFF 468
Query: 535 YIAKG-KDGSLKTYFCTDQSSTGRREILNESIGEHISCYCPNEHMYMLALS--IESSQSI 591
+ K K C+D R L + G + MY + + ++ +
Sbjct: 469 RVFNDTKTHKPKVLMCSD----ARPSSLKQDTG-----LLAKDRMYKPSFAGFVDVDMAD 519
Query: 592 WNIVYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAW 651
I L +DHS+VE F G+T ITSRVYP KA+ A +++FNN T SL AW
Sbjct: 520 GRISLRSL-IDHSVVESFGALGKTVITSRVYPVKAVKENAHLYVFNNGTQTVTIESLNAW 578
Query: 652 QMN 654
M+
Sbjct: 579 NMD 581
|
|
| TAIR|locus:2205677 FRUCT5 "beta-fructofuranosidase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1166 (415.5 bits), Expect = 2.0e-118, P = 2.0e-118
Identities = 249/553 (45%), Positives = 335/553 (60%)
Query: 119 RTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWG-DIVWGHAVSKDLIHWYHLP 177
RT +HFQP KNWMNDPNGP+ YKG YHLFYQYNP GA+W IVWGH+ S DL++W P
Sbjct: 39 RTGYHFQPLKNWMNDPNGPMIYKGIYHLFYQYNPYGAVWDVRIVWGHSTSVDLVNWISQP 98
Query: 178 LAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVK 237
A Q DI G W+GS TILP+GK ++LYTG QVQN+A P + SDP L +W K
Sbjct: 99 PAFNPSQPSDINGCWSGSVTILPNGKPVILYTGIDQNKGQVQNVAVPVNISDPYLREWSK 158
Query: 238 YPGNPVLVPPP--GIGAKDFRDPTTAWLTSEGKWRIAIGSRIN-RTGITFVYDTKDFINY 294
P NP++ GI FRDPTTAWL +G+WR+ +GS + R G+ +Y ++DF N+
Sbjct: 159 PPQNPLMTTNAVNGINPDRFRDPTTAWLGRDGEWRVIVGSSTDDRRGLAILYKSRDFFNW 218
Query: 295 ELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGP-GVKHVVKASMDDDRHDYYAI 353
LH TGMWEC DF+PVS TG G++TS G G+KHV+K S+ + HDYY I
Sbjct: 219 TQSMKPLHYEDLTGMWECPDFFPVSITGSDGVETSSVGENGIKHVLKVSLIETLHDYYTI 278
Query: 354 GTYHEKNVTWVPDNPEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADV 413
G+Y + +VPD + R DYG +YASKTFYD KKRR+LWGW+ ES D+
Sbjct: 279 GSYDREKDVYVPDLGFVQNESAPRLDYGKYYASKTFYDDVKKRRILWGWVNESSPAKDDI 338
Query: 414 KKGWASLQGIPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSA 473
+KGW+ LQ PR + LD ++G LLQWP+EE+++LR ++K LK GS + + +A
Sbjct: 339 EKGWSGLQSFPRKIWLD-ESGKELLQWPIEEIETLRGQQVNWQKKVLKAGSTLQVHGVTA 397
Query: 474 TQLDIVAEF---ELDKAALEKTAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQT 530
Q D+ F EL+KA + + + ++ + CS + S G LGPFGL+VLA + + E T
Sbjct: 398 AQADVEVSFKVKELEKADVIEPSWTDPQKICSQGDLSVMSG-LGPFGLMVLASNDMEEYT 456
Query: 531 PVYFYIAKGKDGS-LKTYF----CTDQSSTGRREILNESIGEHISCYCPNEHMYMLALSI 585
VYF I K D + KT + C+DQS R LN+ E+ ++ + ++I
Sbjct: 457 SVYFRIFKSNDDTNKKTKYVVLMCSDQS----RSSLND---EN------DKSTFGAFVAI 503
Query: 586 ESSQSIWNIVYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVT 645
+ S + + +DHSIVE + GGRT ITSRVYP AI A +F+FN T +
Sbjct: 504 DPSHQT---ISLRTLIDHSIVESYGGGGRTCITSRVYPKLAIGENANLFVFNKGTQSVDI 560
Query: 646 SSLKAWQMNSAFI 658
+L AW + SA I
Sbjct: 561 LTLSAWSLKSAQI 573
|
|
| TAIR|locus:2079944 CWINV2 "cell wall invertase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1162 (414.1 bits), Expect = 5.4e-118, P = 5.4e-118
Identities = 229/543 (42%), Positives = 322/543 (59%)
Query: 119 RTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPL 178
RTA+HFQP ++W+NDPN P+ YKG YHLFYQYNP GA+WG+IVW H+VSKDLI+W L
Sbjct: 48 RTAYHFQPPRHWINDPNAPMLYKGVYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEP 107
Query: 179 AMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKY 238
A+ +W+DI G W+GSAT +P ++LYTG T Q+QN A P D SDP L W+K
Sbjct: 108 AIYPSKWFDINGTWSGSATHVPGKGPVILYTGITENQTQIQNYAIPQDLSDPYLKTWIKP 167
Query: 239 PGNPVLVPPPGIGAKDFRDPTTAWLTS-EGKWRIAIGSRINRTGITFVYDTKDFINYELL 297
NP++ P G FRDPTTAW +G WR+ +GS+ GI ++Y ++DF +
Sbjct: 168 DDNPIVKPDNGENGSAFRDPTTAWFNKKDGYWRMLVGSKRKNRGIAYMYKSRDFKKWVKS 227
Query: 298 RGVLHGVPNTGMWECVDFYPVSTTGE-HGLDTSHNGPGVKHVVKASMDDDRHDYYAIGTY 356
+ +H TGMWEC DF+PVS T + +GLD S++GP KHV+K S+D R++YY +GTY
Sbjct: 228 KRPIHSRKKTGMWECPDFFPVSVTDKKNGLDFSYDGPNAKHVLKVSLDLTRYEYYTLGTY 287
Query: 357 HEKNVTWVPDNPEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKG 416
K + PD D G+R+DYG +YASKTF+D RR+LWGW ESD+ D KG
Sbjct: 288 DTKKDRYRPDGYTPDGWDGLRFDYGNYYASKTFFDDKTNRRILWGWANESDTVQDDTVKG 347
Query: 417 WASLQGIPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQL 476
WA +Q IPRT+ LD+ +G L+ WP+EE++SLR + + +++ G + + Q+
Sbjct: 348 WAGIQLIPRTILLDS-SGKQLVFWPIEEIESLRGKNVQMTNQKMEMGQRFEVQGITPAQV 406
Query: 477 DIVAEFELDKAALEKTAESNVEFSCSSSE-----GSAERGALGPFGLLVLADDSLSEQTP 531
D+ F + LEK + + F+ E GS G +GPFGL+ LA L E TP
Sbjct: 407 DVDVTFNVGN--LEKAEKFDESFATKPLELCNLKGSNVNGGVGPFGLITLATSDLEEYTP 464
Query: 532 VYFYIAK-GKDGSLKTYFCTDQSSTGRREILNESIGEHISCYCPNEHMYMLALSIESSQS 590
V+F + K K C+D + ++ E + Y P+ ++ ++ S
Sbjct: 465 VFFRVFKDAASNKPKVLMCSDAKPSSLKKDTGTDAKERM--YKPSFAGFVDVGLLDGKIS 522
Query: 591 IWNIVYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKA 650
+ +++ DHS+VE F G+T ITSRVYPTKA+ A +F+FNN + SL A
Sbjct: 523 LRSLI------DHSVVESFGAKGKTVITSRVYPTKAVGEKAHLFVFNNGSQPVTVESLNA 576
Query: 651 WQM 653
W M
Sbjct: 577 WNM 579
|
|
| TAIR|locus:2143099 cwINV6 "6-&1-fructan exohydrolase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1071 (382.1 bits), Expect = 2.4e-108, P = 2.4e-108
Identities = 228/554 (41%), Positives = 318/554 (57%)
Query: 119 RTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGD--IVWGHAVSKDLIHWYHL 176
RT+FHFQPQ+NW+NDPN P++YKG+YHLFYQ NP + I+WGH+VS+D+++W L
Sbjct: 17 RTSFHFQPQRNWLNDPNAPMYYKGFYHLFYQNNPLAPEFSRTRIIWGHSVSQDMVNWIQL 76
Query: 177 PLAMVADQWYDIMGVWTGSATILPDGKLMMLYTG-STNESVQVQNLAYPADPSDPLLIKW 235
A+V + +DI W+GSATILPDG+ ++LYTG N QV +A P D SDPLL +W
Sbjct: 77 EPALVPSESFDINSCWSGSATILPDGRPVILYTGLDVNNKQQVTVVAEPKDVSDPLLREW 136
Query: 236 VKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRT--GITFVYDTKDFIN 293
VK NPV+VPP + FRDPT AW +GKWR+ IG++ T G+ +Y + DF+
Sbjct: 137 VKPKYNPVMVPPSNVPFNCFRDPTEAWKGQDGKWRVLIGAKEKDTEKGMAILYRSDDFVQ 196
Query: 294 YELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAI 353
+ L TGMWEC DF+PVS TG+ G+DTS N V+HV+KAS + D Y I
Sbjct: 197 WTKYPVPLLESEGTGMWECPDFFPVSITGKEGVDTSVNNASVRHVLKASFGGN--DCYVI 254
Query: 354 GTYHEKNVTWVPDNPEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADV 413
G Y + + D + +RYD+G FYASK F+D K RR+ WGW+ E+DS+ D
Sbjct: 255 GKYSSETEDFSADYEFTNTSADLRYDHGTFYASKAFFDSVKNRRINWGWVIETDSKEDDF 314
Query: 414 KKGWASLQGIPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKI-ELKPGSVMPLDVGS 472
KKGWA L +PR + +DT +G L+QWP+EE+++LR S E K GS + +
Sbjct: 315 KKGWAGLMTLPREIWMDT-SGKKLMQWPIEEINNLRTKSVSLDDCYEFKTGSTFEISGIT 373
Query: 473 ATQLDIVAEFELDKAALEKTAE----SNVEFSCSSSEGSAERGALGPFGLLVLADDSLSE 528
A Q D+ F L LE E V+ + S+ GPFGLL LA LSE
Sbjct: 374 AAQADVEVTFNLP--FLENNPEILDADQVDDATLFDRDSSVGCVYGPFGLLALASSDLSE 431
Query: 529 QTPVYFYIAKGKDGSLKTYFCTDQSSTGRREILNESIGEHISCYCPNEHMYMLALSIESS 588
QT ++F + + +G +++ S+ R I S G + +E + + L
Sbjct: 432 QTAIFFKVIRRGNGYAVVMCSSEKRSSLRDNIKKSSHGAFLDIDPRHEKISLRCL----- 486
Query: 589 QSIWNIVYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSL 648
+DHSI+E + GG+T ITSRVYP AI AA++++FN+ + +SL
Sbjct: 487 ------------IDHSIIESYGVGGKTVITSRVYPKLAIGEAAKLYVFNDGENGVIMTSL 534
Query: 649 KAWQMNSAFIRPYP 662
+AW M +A I P
Sbjct: 535 EAWSMRNAQINSNP 548
|
|
| UNIPROTKB|Q4KBP1 scrB "Sucrose-6-phosphate hydrolase" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
|---|
Score = 406 (148.0 bits), Expect = 2.1e-41, Sum P(2) = 2.1e-41
Identities = 116/380 (30%), Positives = 185/380 (48%)
Query: 119 RTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPL 178
R A+H P WMNDPNG V+++G YH+FYQ++P A WG + WGHA S+DL+HW HLP+
Sbjct: 33 RLAYHLAPPVGWMNDPNGLVYFRGEYHVFYQHHPYSAQWGPMHWGHAKSRDLVHWEHLPI 92
Query: 179 AMVADQWYDIMGVWTGSATILPDGKLMMLYTGST-------NESV-QVQNLAYPADPSDP 230
A+ + YD G ++GSA ++ D L ++YTG T S+ QVQ LA D
Sbjct: 93 ALAPGEAYDRDGCFSGSAVVMDD-VLYLIYTGHTWLGAPGDERSIRQVQCLASSTDG--- 148
Query: 231 LLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKD 290
+ + K+ PV+ P G FRDP W E +W +A+G+R +Y + D
Sbjct: 149 --VAFSKH--GPVIDRAPEPGIMHFRDPKV-WRRGE-QWWMALGARQGDAPQLLLYRSGD 202
Query: 291 FINYELLRGVLHGVPNTG--MWECVDFYP-----VSTTGEHGLDTS--HNGPGVKHVVKA 341
++ LR L G + MWEC D + V GL+ S N ++ +
Sbjct: 203 LHHWTYLRCALQGQRESDGYMWECPDLFELDGCDVFLYSPQGLNPSGYDNWNKFQNSYRM 262
Query: 342 SMDDDRHDYYAIGTYHEKNVTWVPDNPEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWG 401
+ DDR Y++ G + E+D G +D FYA++T + RR+LW
Sbjct: 263 GLLDDR-GYFSEGG----------ELRELDHG----HD---FYAAQTLLAPDG-RRLLWA 303
Query: 402 WIGESDSEIADVKKGWASLQGIPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELK 461
W+ DS + + W +PR ++ + G L P E+ +LR + + ++
Sbjct: 304 WMDMWDSPMPSQAQHWCGALSLPRELS---RNGERLRMRPARELAALRQSQRTLAIGVVE 360
Query: 462 PGSVMPLDVGSATQLDIVAE 481
G+ + + G+ + ++ +
Sbjct: 361 SGNCILAERGALLEFELTLD 380
|
|
| TIGR_CMR|BA_0753 BA_0753 "sucrose-6-phosphate hydrolase" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 374 (136.7 bits), Expect = 8.5e-39, Sum P(2) = 8.5e-39
Identities = 105/324 (32%), Positives = 156/324 (48%)
Query: 113 NMLSWQRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIH 172
N SW + +H P MNDPNG +Y YH+FYQ+ P G I G WGH SKDLI+
Sbjct: 23 NQDSW-KPIYHIHPPFGLMNDPNGVSYYNDEYHVFYQWYPFGPIHGMKHWGHVKSKDLIN 81
Query: 173 WYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLL 232
W +P+A++ + Y+ G ++GSA I+ D L +LYTG+ ++ D
Sbjct: 82 WERMPVAIIPTESYESHGAYSGSA-IVKDDLLHLLYTGNIKNPDDSRDAKQCMATMDSQY 140
Query: 233 IKWVKYPGNPVL-VPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDF 291
KY NPV+ + P G K RDP W ++ + + R N+TG +Y +KD
Sbjct: 141 TM-TKYSNNPVIDIIPDGY-TKHVRDPKV-WKHNDIYYMLLGAQRKNKTGTLLLYKSKDL 197
Query: 292 INYELLRGVLHGVPNTG-MWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDY 350
N+ + + G MWEC D++ +S G+ L S G ++ +D + Y
Sbjct: 198 YNWNFQGEITTNLKEFGFMWECPDYFQLS--GKDVLLFSPQG------IEKDREDFHNIY 249
Query: 351 ---YAIGTYHEKNVTWVPDNP-EIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGES 406
YAIG + KN+ + D+ E D G +D FYA +T D RR+L+ W G S
Sbjct: 250 NVVYAIGHFDIKNLYFHIDSYYEADKG----FD---FYAPQTLEDSTS-RRLLFAWAGSS 301
Query: 407 DSEIADVKKGWASLQGIPRTVALD 430
+ WA +PR + L+
Sbjct: 302 EITYPSDDYMWAHCLTLPRELTLE 325
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P93761 | INV1_CAPAN | 3, ., 2, ., 1, ., 2, 6 | 0.5947 | 0.8210 | 0.9031 | N/A | no |
| P29000 | INVA_SOLLC | 3, ., 2, ., 1, ., 2, 6 | 0.5727 | 0.8835 | 0.9779 | N/A | no |
| P80065 | INVB_DAUCA | 3, ., 2, ., 1, ., 2, 6 | 0.6208 | 0.8963 | 0.9546 | N/A | no |
| Q39041 | INVA4_ARATH | 3, ., 2, ., 1, ., 2, 6 | 0.6208 | 0.8678 | 0.9201 | yes | no |
| Q43857 | INVA_VICFA | 3, ., 2, ., 1, ., 2, 6 | 0.6683 | 0.8210 | 0.9003 | N/A | no |
| P29001 | INVA_VIGRR | 3, ., 2, ., 1, ., 2, 6 | 0.6400 | 0.9019 | 0.9784 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 704 | |||
| smart00640 | 437 | smart00640, Glyco_32, Glycosyl hydrolases family 3 | 0.0 | |
| pfam00251 | 305 | pfam00251, Glyco_hydro_32N, Glycosyl hydrolases fa | 1e-158 | |
| cd08996 | 298 | cd08996, GH32_B_Fructosidase, Glycosyl hydrolase f | 2e-99 | |
| COG1621 | 486 | COG1621, SacC, Beta-fructosidases (levanase/invert | 1e-68 | |
| TIGR01322 | 445 | TIGR01322, scrB_fam, sucrose-6-phosphate hydrolase | 5e-55 | |
| cd08772 | 286 | cd08772, GH43_62_32_68, Glycosyl hydrolase familie | 5e-30 | |
| pfam11837 | 106 | pfam11837, DUF3357, Domain of unknown function (DU | 5e-23 | |
| cd08995 | 280 | cd08995, GH32_Aec43_like, Glycosyl hydrolase famil | 6e-18 | |
| cd08979 | 276 | cd08979, GH_J, Glycosyl hydrolase families 32 and | 6e-18 | |
| pfam08244 | 83 | pfam08244, Glyco_hydro_32C, Glycosyl hydrolases fa | 2e-06 |
| >gnl|CDD|214757 smart00640, Glyco_32, Glycosyl hydrolases family 32 | Back alignment and domain information |
|---|
Score = 523 bits (1348), Expect = 0.0
Identities = 214/500 (42%), Positives = 269/500 (53%), Gaps = 72/500 (14%)
Query: 123 HFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVA 182
HFQP K WMNDPNG ++YKG YHLFYQYNP GA+WG+I WGHAVSKDL+HW HLP+A+
Sbjct: 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGAVWGNIHWGHAVSKDLVHWTHLPVALAP 60
Query: 183 DQWYDIMGVWTGSATILPDGKLMMLYTGST--NESVQVQNLAYPADPSDPLLIKWVKYPG 240
D+WYD GV++GSA I P L +LYTG+ + +VQVQ AY SD L W KY G
Sbjct: 61 DEWYDSNGVFSGSAVIDPGN-LSLLYTGNVAIDTNVQVQRQAYQCAASDDLGGTWTKYDG 119
Query: 241 NPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIG-SRINRTGITFVYDTKDFINYELLRG 299
NPVL PPPG G + FRDP W KW + IG S ++ GI +Y + D N+ LL
Sbjct: 120 NPVLTPPPGGGTEHFRDPKVFW-YDGDKWYMVIGASDEDKRGIALLYRSTDLKNWTLLSE 178
Query: 300 VLHGVP--NTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIGTYH 357
LH + GMWEC D +P+ G+ KHV+K S +YY +G +
Sbjct: 179 FLHSLLGDTGGMWECPDLFPLPGEGDTS----------KHVLKVSPQGGSGNYYFVGYFD 228
Query: 358 EKNVTWVPDNPEIDVGIGIRYDYGL-FYASKTFYDQNKKRRVLWGWIGESDSEIADVK-K 415
+ T+ PD+P D G G+R DYG FYAS+TFYD + RR+L GW+G DS DV K
Sbjct: 229 G-DDTFTPDDPV-DTGHGLRLDYGFDFYASQTFYDPDGNRRILIGWMGNWDSYADDVPTK 286
Query: 416 GWASLQGIPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDV--GSA 473
GWA +PR + LD TG LLQWPVEE++SLR KE + LK GSV L S
Sbjct: 287 GWAGALSLPRELTLD-LTGGKLLQWPVEELESLR-NKKELLNLTLKNGSVTELLGLTASG 344
Query: 474 TQLDIVAEFELDKAALEKTAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVY 533
+I FE+D G GPFGLLV A LSEQT VY
Sbjct: 345 DSYEIELSFEVDS------------------------GTAGPFGLLVRASKDLSEQTAVY 380
Query: 534 FYIAKGKDGSLKTYFCTDQSSTGRREILNESIGEHISCYCPNEHMYMLALSIESSQSIWN 593
+ ++ G C D+ S+G +E+ + P + L+L
Sbjct: 381 YDVSNG-------TLCLDRRSSGG--SFDEAFKGVRGAFVPLDPGETLSL---------- 421
Query: 594 IVYVYLQVDHSIVEGFAQGG 613
+ VD S VE FA GG
Sbjct: 422 ----RILVDRSSVEIFANGG 437
|
Length = 437 |
| >gnl|CDD|215819 pfam00251, Glyco_hydro_32N, Glycosyl hydrolases family 32 N-terminal domain | Back alignment and domain information |
|---|
Score = 458 bits (1180), Expect = e-158
Identities = 168/327 (51%), Positives = 207/327 (63%), Gaps = 30/327 (9%)
Query: 123 HFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVA 182
HFQP K WMNDPNG V+YKG YHLFYQYNP GA+WG+ WGHAVSKDL+HW HLP+A+
Sbjct: 1 HFQPPKGWMNDPNGLVYYKGEYHLFYQYNPFGAVWGNKHWGHAVSKDLVHWEHLPVALAP 60
Query: 183 DQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNP 242
D+WYD G ++GSA +LPD L++LYTG+T+ S QVQ LAY AD W KYPGNP
Sbjct: 61 DEWYDSNGCFSGSAVVLPD-NLVLLYTGNTDRSTQVQCLAYSADDG----RTWTKYPGNP 115
Query: 243 VLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRIN-RTGITFVYDTKDFINYELLRGVL 301
V++ PP K FRDP AW +GKW + +G++ N + G +Y +KD N+ELL +L
Sbjct: 116 VIINPPPGYTKHFRDPKVAWYEPDGKWYMVLGAQDNDKRGKALLYRSKDLKNWELLGELL 175
Query: 302 HGVP-NTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMD---DDRHDYYAIGTYH 357
H VP GMWEC D +PV D NGP VKHV+K S + DYY IGT+
Sbjct: 176 HSVPDGGGMWECPDLFPV--------DGKDNGP-VKHVLKFSPQGYQNGYQDYYFIGTFD 226
Query: 358 EKNVTWVPDNPEIDVGIGIRYDYG-LFYASKTFYDQNKKRRVLWGWIGESDSEIADV--K 414
T+ P + + R DYG FYAS+TFYD + +RR+L GW+GE DSE DV
Sbjct: 227 ADGDTFTPPDEQ-------RLDYGFDFYASQTFYDPDGRRRILIGWMGEWDSEADDVPTT 279
Query: 415 KGWASLQGIPRTVALDTKTGSNLLQWP 441
KGWA IPR + L G LLQWP
Sbjct: 280 KGWAGALSIPRELTLK-DEGGKLLQWP 305
|
This domain corresponds to the N-terminal domain of glycosyl hydrolase family 32 which forms a five bladed beta propeller structure. Length = 305 |
| >gnl|CDD|185737 cd08996, GH32_B_Fructosidase, Glycosyl hydrolase family 32, beta-fructosidases | Back alignment and domain information |
|---|
Score = 307 bits (789), Expect = 2e-99
Identities = 125/322 (38%), Positives = 167/322 (51%), Gaps = 30/322 (9%)
Query: 129 NWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDI 188
WMNDPNG V++ G YHLFYQYNP G +WG++ WGHA SKDL+HW HLP+A+ D YD
Sbjct: 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWGNMHWGHATSKDLVHWEHLPVALAPDDPYDS 60
Query: 189 MGVWTGSATILPDGKLMMLYTG---STNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLV 245
G ++GSA + +GKL++ YTG Q Q LAY S + KY GNPV+
Sbjct: 61 GGCFSGSAVVDDNGKLVLFYTGNVKLDGGRRQTQCLAY----STDDGRTFTKYEGNPVIP 116
Query: 246 PPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI-NRTGITFVYDTKDFINYELLRGVLHGV 304
PP G FRDP W +GKW + +G+ + TG +Y + D N+E L +L +
Sbjct: 117 PPDG-YTTHFRDPKVFW--HDGKWYMVLGAGTEDGTGRILLYRSDDLKNWEYLGELLTSL 173
Query: 305 PNTG-MWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIGTYHEKNVTW 363
+ G MWEC D +P+ G+ L S G + Y +G + T+
Sbjct: 174 GDFGYMWECPDLFPLDVEGKWVLIFSPQGLEPEGNG-------SGTGYLVGDFDGTTFTF 226
Query: 364 VPDNPEIDVGIGIRYDYGL-FYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQG 422
D DYG FYA +TF D + RR+L GW+G D E + GWA
Sbjct: 227 -------DHTEFGELDYGFDFYAPQTFVDPD-GRRILIGWMGNWDYEYPTPEDGWAGCLT 278
Query: 423 IPRTVALDTKTGSNLLQWPVEE 444
+PR ++L K G L Q PV E
Sbjct: 279 LPRELSL--KDGGRLYQRPVRE 298
|
Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. These enzymes are predicted to display a 5-fold beta-propeller fold as found for GH43 and CH68. The breakdown of sucrose is widely used as a carbon or energy source by bacteria, fungi, and plants. Invertase is used commercially in the confectionery industry, since fructose has a sweeter taste than sucrose and a lower tendency to crystallize. A common structural feature of all these enzymes is a 5-bladed beta-propeller domain, similar to GH43, that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. Length = 298 |
| >gnl|CDD|224536 COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 232 bits (594), Expect = 1e-68
Identities = 147/515 (28%), Positives = 211/515 (40%), Gaps = 92/515 (17%)
Query: 119 RTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPL 178
R +HF P W+NDPNG +++ G YHLFYQYNP GA G WGHAVSKDL+HW HLP+
Sbjct: 29 RPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHGPKHWGHAVSKDLVHWEHLPI 88
Query: 179 AMVADQWYDIMGVWTGSATILPDGKLMMLYTG----STNESVQVQNLAYPADPSDPLLIK 234
A+ D YD G ++GSA ++ DG L + YTG S Q Q +AY D
Sbjct: 89 ALAPDDDYDSHGCYSGSA-VVDDGNLSLFYTGNVRDSNGIRQQTQCIAYSED-----GGT 142
Query: 235 WVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGS-RINRTGITFVYDTKDFIN 293
+ KY GNP++ P G FRDP W GKW + +G+ + G +Y++ D N
Sbjct: 143 FEKYSGNPIIDQPEGY-TPHFRDPKVVW-DEGGKWWMMLGAQGEDLKGTILLYESDDLKN 200
Query: 294 YELLRGVLHGVPNTG-MWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYA 352
++ G MWEC D + + GE L G + + +Y
Sbjct: 201 WQFTGEFGLEQGGLGYMWECPDLFEL--DGEDVLLFWPQG----------LSINGGEYDN 248
Query: 353 IGTYHEKNVTWVPDNPEIDVGIGIRYDYGL-FYASKTFYDQNKKRRVLWGWIG--ESDSE 409
I + ++D G D+G FYA +TF D RR+L GW+G + +
Sbjct: 249 IYQSGYFVGDFDGKEFKLDDGQFRELDFGFDFYAPQTFLD-PDGRRILIGWMGNWDYTNN 307
Query: 410 IADVKKGWASLQGIPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLD 469
+ +GW +PR + L+ L Q PV E++SLR + L S + L
Sbjct: 308 YPTIDEGWRGAMTLPRELTLE---DGKLYQTPVRELESLRKPEEAAHNTTLSGNSKLELP 364
Query: 470 VGSATQLDIVAEFELDKAALEKTAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQ 529
G A +LD+ L T ++ + +
Sbjct: 365 SGDAYELDL---------DLIWTDATSFGL-----------------------ELRMGLN 392
Query: 530 TPVYFYIAKGKDGSLKTYFCTDQSSTGRREILNESIGEHISCYCPNEHMYMLALSIESSQ 589
Y + D+S + GE C+ N L
Sbjct: 393 LVGYDVENE--------TLTLDRSDSPL---FTVQDGETRECFIENGAKVHL-------- 433
Query: 590 SIWNIVYVYLQVDHSIVEGFAQGGRTTITSRVYPT 624
++ VD+S VE F G TSR++PT
Sbjct: 434 ------RIF--VDNSSVEIFINDGEKVFTSRIFPT 460
|
Length = 486 |
| >gnl|CDD|233357 TIGR01322, scrB_fam, sucrose-6-phosphate hydrolase | Back alignment and domain information |
|---|
Score = 194 bits (495), Expect = 5e-55
Identities = 142/521 (27%), Positives = 215/521 (41%), Gaps = 106/521 (20%)
Query: 119 RTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPL 178
R FH QPQ +NDPNG +++KG YHLFYQ+ P G + G WGH SKDL+HW +
Sbjct: 14 RPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHGLKSWGHYTSKDLVHWEDEGV 73
Query: 179 AMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNES----VQVQNLAYPADPSDPLLIK 234
A+ D YD G ++GSA + +G+L ++YTG+ +S Q LA D
Sbjct: 74 ALAPDDPYDSHGCYSGSA-VDNNGQLTLMYTGNVRDSDWNRESYQCLATMDDDGH----- 127
Query: 235 WVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSR-INRTGITFVYDTKDFIN 293
+ G V+ PP FRDP W G W + IG++ G +Y +KD N
Sbjct: 128 -FEKFGIVVIELPPAGYTAHFRDPKV-W-KHNGHWYMVIGAQTETEKGSILLYRSKDLKN 184
Query: 294 Y----ELLRGVLHGVPNTG-MWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRH 348
+ E+L +G+ + G MWEC D + + G+ L S G + AS D ++
Sbjct: 185 WTFVGEILGDGQNGLDDRGYMWECPDLFSLD--GQDVLLFSPQG------LDASGYDYQN 236
Query: 349 DY---YAIGTYHEKNVTWVPDNPEIDVGIGIRYDYGL-FYASKTFYDQNKKRRVLWGWIG 404
Y Y +G + + + DYG FYA +TF + RR+L W+G
Sbjct: 237 IYQNGYIVGQLDYEAPEF---THGTEF---HELDYGFDFYAPQTFLAPD-GRRILVAWMG 289
Query: 405 ESDSEIADVKKGWASLQGIPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGS 464
+ + + GWA +PR L K G L+Q P+ E+ +LR T + + +
Sbjct: 290 LPEIDYPTDRDGWAHCMTLPRE--LTLKDG-KLVQTPLRELKALR-TEEHINVFGDQEHT 345
Query: 465 VMPLDVGSATQLDIVAE--FELDKAALEKTAESNVEFSCSSSEGSAERGALGPFGLLVLA 522
+ L+ LD+ + FEL A K E+ + +
Sbjct: 346 LPGLNGEFELILDLEKDSAFELGLALTNKGEETLLTIDADEGK----------------- 388
Query: 523 DDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSSTGRREILNESIGEHISCYCPNEHMYMLA 582
+ + G+L+ Y G SC PN
Sbjct: 389 -----------VTLDRRSSGNLEDY------------------GGTRSCPLPNT------ 413
Query: 583 LSIESSQSIWNIVYVYLQVDHSIVEGFAQGGRTTITSRVYP 623
V +++ +D S VE F G +TSR++P
Sbjct: 414 ----------KKVSLHIFIDKSSVEIFINDGEEVMTSRIFP 444
|
[Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 445 |
| >gnl|CDD|185718 cd08772, GH43_62_32_68, Glycosyl hydrolase families: GH43, GH62, GH32, GH68 | Back alignment and domain information |
|---|
Score = 119 bits (301), Expect = 5e-30
Identities = 73/303 (24%), Positives = 104/303 (34%), Gaps = 29/303 (9%)
Query: 132 NDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVAD----QWYD 187
DPN + Y G Y++F+ + G+ HA SKDL++W P+A+V D
Sbjct: 1 ADPN-LIKYNGTYYIFFSGDDKN---GNPGIAHATSKDLVNWTDHPVALVWWARRGGPKD 56
Query: 188 IMGVWTGSATILPDGKLMMLYTGSTNESV-QVQNLAYPADPSDPLLIKWVKYPGNPVLV- 245
G+W S + +GK + YT + Q +A D + P W Y G PVL
Sbjct: 57 SGGIWAPSIVYIENGKFYLYYTDVSFTKNQQTIGVATAEDGNGP----WTDYIGGPVLPD 112
Query: 246 PPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRIN-RTGITFVYDTKDFINYEL--LRGVLH 302
PP +FRDP +GKW + GS + G F+Y++ D ++ ++
Sbjct: 113 NPPAADVSNFRDPFVFEDD-DGKWYLVFGSGDHHNFGGIFLYESDDDTTWKKGSAELLIS 171
Query: 303 GVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIGTYHEKNVT 362
E G++ L S NG G YA
Sbjct: 172 EGEGGKQIEGPGLLKK--NGKYYLFYSINGTGRVDSTY-------SIGYARSESDTGPYV 222
Query: 363 WVPDNPEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQG 422
D G Y + F D R VL GW
Sbjct: 223 PKSDTSGGLSLTGGNDGGVGPYHAAAFNDAG-GRVVLVYHAYNV-QYADAPTYGWGRSLA 280
Query: 423 IPR 425
IPR
Sbjct: 281 IPR 283
|
Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32 comprises sucrose-6-phosphate hydrolases, invertases, inulinases, levanases, eukaryotic fructosyltransferases, and bacterial fructanotransferases while GH68 consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10); beta-fructofuranosidase (EC 3.2.1.26); inulosucrase (EC 2.4.1.9), while GH68 consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10); beta-fructofuranosidase (EC 3.2.1.26); inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Members of this clan are retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) that catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. Structures of all families in the two clans manifest a funnel-shaped active site that comprises two subsites with a single route for access by ligands. Length = 286 |
| >gnl|CDD|221256 pfam11837, DUF3357, Domain of unknown function (DUF3357) | Back alignment and domain information |
|---|
Score = 94.0 bits (234), Expect = 5e-23
Identities = 44/122 (36%), Positives = 52/122 (42%), Gaps = 23/122 (18%)
Query: 1 MADSNVSYNPLPDGERPR----PTRRRS---IVLVLSGLLVVGFLVALLSDNGSIAPANV 53
+ SY PLPDG+ P RRR ++ VLS LL + LVALL NG
Sbjct: 1 LETLPYSYTPLPDGDESAGGPPPRRRRPLKGLLAVLSSLLFLLSLVALLILNG------- 53
Query: 54 IDNDNNNVNDNAKNGLNDVSSSSKEPERLRPFTSASSAGVSEKSNRRFGSRTASYPWTNN 113
D + S PE P + S GVSEKSN AS+PWTN
Sbjct: 54 ----QPPDGDVVLVSSPETS-----PETAAPVSRGVSEGVSEKSNGALAGADASFPWTNA 104
Query: 114 ML 115
ML
Sbjct: 105 ML 106
|
This domain is functionally uncharacterized. This domain is found in eukaryotes. This presumed domain is typically between 96 to 119 amino acids in length. Length = 106 |
| >gnl|CDD|185736 cd08995, GH32_Aec43_like, Glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Score = 84.3 bits (209), Expect = 6e-18
Identities = 70/303 (23%), Positives = 104/303 (34%), Gaps = 64/303 (21%)
Query: 137 PVFYKGWYHLFYQYNP--NGAIWGDIVWGHAVSKDLIHWYHLP--LAMVADQWYDIMGVW 192
P + G +H+FY ++P W +KDL+++ + D+ D +
Sbjct: 5 PFYDDGTFHIFYLHDPRNGPPEGLRHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDD-AIG 63
Query: 193 TGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGA 252
TGS I +G YTG N + + + A D LI W K P ++ G
Sbjct: 64 TGSV-IKGEGTYHAFYTGH-NLDGKPKQVVMHATSDD--LITWTKDPEFILIADGEGYEK 119
Query: 253 KDFRDPTTAWLTSEGKWRIAIGSR-----INRTGITFVYDTKDFINYELLRGVLHGVPNT 307
D+RDP W EG + + + +R NR G ++ +KD N+E +
Sbjct: 120 NDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRRGCIALFTSKDLKNWE-YEEPFYAPGLY 178
Query: 308 GMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIGTYHEKNVT----- 362
M EC D + M D Y + E T
Sbjct: 179 FMPECPDLF-------------------------KMGD--WWYLVYSEFSENRKTHYRVS 211
Query: 363 -------WVPDNPEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKK 415
PD+ D G FYA+KT D RR L+GW+ D
Sbjct: 212 KSPFGPWRAPDDDTFD-GRA-------FYAAKTASD--GTRRFLFGWVPTKAGNDDDGNW 261
Query: 416 GWA 418
W
Sbjct: 262 EWG 264
|
This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. These enzymes are predicted to display a 5-fold beta-propeller fold as found for GH43 and CH68. The breakdown of sucrose is widely used as a carbon or energy source by bacteria, fungi, and plants. Invertase is used commercially in the confectionery industry, since fructose has a sweeter taste than sucrose and a lower tendency to crystallize. Length = 280 |
| >gnl|CDD|185720 cd08979, GH_J, Glycosyl hydrolase families 32 and 68, which for the clan GH-J | Back alignment and domain information |
|---|
Score = 84.0 bits (208), Expect = 6e-18
Identities = 68/275 (24%), Positives = 95/275 (34%), Gaps = 40/275 (14%)
Query: 141 KGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHL---PLAMVADQWYDIMGVWTGSAT 197
G YHLFY P G G+ A S D W+ PL +D GVWT S
Sbjct: 13 VGKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVV 72
Query: 198 ILPDGKLMMLYTG--STNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLV-----PPPGI 250
PDG M YTG +VQ LA D LI W K+ NPV P
Sbjct: 73 RDPDGTYRMFYTGYDRPKGAVQRIGLATSKD-----LIHWTKHGPNPVPRWYESGNPGPW 127
Query: 251 GAKDFRDPTTAWLTSEGKWRIAIGSR-INRTGITFVYDTKDFINYELLRGVLHGVPNT-- 307
+RDP G WR+ G+R + G + + D I++ +
Sbjct: 128 DDHAWRDPAVVRDEEGGGWRMYYGARDADERGAIGLATSPDLIHWTPVPPPPGPRTGYDD 187
Query: 308 GMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIGTYHEKNVTWVPDN 367
G E + G +++ + ++D Y +GT + P
Sbjct: 188 GQLEVPQVVKI--------------DGRWYLLYSGRNEDAKTGYRVGT-----ALFGPGR 228
Query: 368 PEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGW 402
P + D YA++ D VL G+
Sbjct: 229 PLTLAELL---DRTDLYAARPVPDGEGGGVVLEGF 260
|
This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH68 consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10); beta-fructofuranosidase (EC 3.2.1.26); inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. A common structural feature of all these enzymes is a 5-bladed beta-propeller domain, similar to GH43, that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. Length = 276 |
| >gnl|CDD|219762 pfam08244, Glyco_hydro_32C, Glycosyl hydrolases family 32 C terminal | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 2e-06
Identities = 24/99 (24%), Positives = 37/99 (37%), Gaps = 23/99 (23%)
Query: 515 PFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSSTGRREILNESIGEHISCYCP 574
FGLL+ A + SEQT + + +KG D+S++G + +
Sbjct: 8 SFGLLLRASNDGSEQTLIGYDKSKGL-------LTVDRSNSGNGVFKEK--------FGS 52
Query: 575 NEHMYMLALSIESSQSIWNIVYVYLQVDHSIVEGFAQGG 613
L S + ++ VD S VE FA G
Sbjct: 53 GVRAAPLPEKDTLS------LRIF--VDRSSVEVFANDG 83
|
This domain corresponds to the C terminal domain of glycosyl hydrolase family 32. It forms a beta sandwich module. Length = 83 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 704 | |||
| KOG0228 | 571 | consensus Beta-fructofuranosidase (invertase) [Car | 100.0 | |
| COG1621 | 486 | SacC Beta-fructosidases (levanase/invertase) [Carb | 100.0 | |
| TIGR01322 | 445 | scrB_fam sucrose-6-phosphate hydrolase. | 100.0 | |
| smart00640 | 437 | Glyco_32 Glycosyl hydrolases family 32. | 100.0 | |
| PF00251 | 308 | Glyco_hydro_32N: Glycosyl hydrolases family 32 N-t | 100.0 | |
| cd08996 | 298 | GH32_B_Fructosidase Glycosyl hydrolase family 32, | 100.0 | |
| cd08995 | 280 | GH32_Aec43_like Glycosyl hydrolase family 32. This | 100.0 | |
| cd08979 | 276 | GH_J Glycosyl hydrolase families 32 and 68, which | 100.0 | |
| cd08772 | 286 | GH43_62_32_68 Glycosyl hydrolase families: GH43, G | 100.0 | |
| cd08997 | 349 | GH68 Glycosyl hydrolase family 68, includes levans | 99.94 | |
| cd08994 | 291 | GH43_like_2 Glycosyl hydrolase 43-like family cons | 99.87 | |
| cd08984 | 294 | GH43_5 Glycosyl hydrolase family 43. This glycosyl | 99.82 | |
| cd08993 | 268 | GH43_DUF377 Glycosyl hydrolase family 43 containin | 99.8 | |
| cd09004 | 275 | GH43_bXyl Glycosyl hydrolase family 43, includes m | 99.79 | |
| cd08999 | 287 | GH43_ABN_2 Glycosyl hydrolase family 43. This glyc | 99.7 | |
| cd08990 | 274 | GH43_AXH_like Glycosyl hydrolase family 43, includ | 99.63 | |
| cd08978 | 271 | GH_F Glycosyl hydrolase families 43 and 62 form CA | 99.58 | |
| cd08991 | 294 | GH43_bXyl_2 Glycosyl hydrolase family 43. This gly | 99.53 | |
| cd08998 | 288 | GH43_ABN_1 Glycosyl hydrolase family 43. This glyc | 99.47 | |
| cd08992 | 349 | GH43_like_1 Glycosyl hydrolase family 43, uncharac | 99.47 | |
| cd08984 | 294 | GH43_5 Glycosyl hydrolase family 43. This glycosyl | 99.39 | |
| PF11837 | 106 | DUF3357: Domain of unknown function (DUF3357); Int | 99.36 | |
| cd08985 | 265 | GH43_6 Glycosyl hydrolase family 43. This glycosyl | 99.3 | |
| cd08979 | 276 | GH_J Glycosyl hydrolase families 32 and 68, which | 99.29 | |
| PF04041 | 312 | DUF377: Domain of unknown function (DUF377); Inter | 99.23 | |
| PF04616 | 286 | Glyco_hydro_43: Glycosyl hydrolases family 43; Int | 99.23 | |
| PF08244 | 86 | Glyco_hydro_32C: Glycosyl hydrolases family 32 C t | 99.22 | |
| cd09000 | 288 | GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xy | 99.2 | |
| cd08983 | 276 | GH43_4 Glycosyl hydrolase family 43. This glycosyl | 99.19 | |
| cd09003 | 311 | GH43_AXH_1 Glycosyl hydrolase family 43. This glyc | 99.17 | |
| cd08992 | 349 | GH43_like_1 Glycosyl hydrolase family 43, uncharac | 99.05 | |
| cd08988 | 279 | GH43_ABN Glycosyl hydrolase family 43. This glycos | 98.96 | |
| cd08981 | 291 | GH43_2 Glycosyl hydrolase family 43. This glycosyl | 98.94 | |
| cd08989 | 269 | GH43_XYL Glycosyl hydrolase family 43, beta-D-xylo | 98.79 | |
| cd08980 | 288 | GH43_1 Glycosyl hydrolase family 43. This glycosyl | 98.77 | |
| cd08993 | 268 | GH43_DUF377 Glycosyl hydrolase family 43 containin | 98.73 | |
| cd09001 | 269 | GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xy | 98.72 | |
| PF02435 | 428 | Glyco_hydro_68: Levansucrase/Invertase; InterPro: | 98.71 | |
| cd08986 | 269 | GH43_7 Glycosyl hydrolase family 43. This glycosyl | 98.66 | |
| cd08987 | 303 | GH62 Glycosyl hydrolase family 62, characterized a | 98.54 | |
| cd08994 | 291 | GH43_like_2 Glycosyl hydrolase 43-like family cons | 98.53 | |
| cd09002 | 280 | GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xy | 98.51 | |
| COG2152 | 314 | Predicted glycosylase [Carbohydrate transport and | 98.51 | |
| cd08995 | 280 | GH32_Aec43_like Glycosyl hydrolase family 32. This | 98.51 | |
| cd08978 | 271 | GH_F Glycosyl hydrolase families 43 and 62 form CA | 98.45 | |
| cd08982 | 295 | GH43_3 Glycosyl hydrolase family 43. This glycosyl | 98.42 | |
| cd08983 | 276 | GH43_4 Glycosyl hydrolase family 43. This glycosyl | 98.39 | |
| cd08999 | 287 | GH43_ABN_2 Glycosyl hydrolase family 43. This glyc | 98.33 | |
| cd08772 | 286 | GH43_62_32_68 Glycosyl hydrolase families: GH43, G | 98.28 | |
| PF04041 | 312 | DUF377: Domain of unknown function (DUF377); Inter | 98.22 | |
| cd08991 | 294 | GH43_bXyl_2 Glycosyl hydrolase family 43. This gly | 98.2 | |
| cd08990 | 274 | GH43_AXH_like Glycosyl hydrolase family 43, includ | 98.2 | |
| cd08996 | 298 | GH32_B_Fructosidase Glycosyl hydrolase family 32, | 98.18 | |
| cd08986 | 269 | GH43_7 Glycosyl hydrolase family 43. This glycosyl | 98.17 | |
| cd08998 | 288 | GH43_ABN_1 Glycosyl hydrolase family 43. This glyc | 98.03 | |
| PF04616 | 286 | Glyco_hydro_43: Glycosyl hydrolases family 43; Int | 97.98 | |
| TIGR01322 | 445 | scrB_fam sucrose-6-phosphate hydrolase. | 97.82 | |
| cd09002 | 280 | GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xy | 97.81 | |
| cd08989 | 269 | GH43_XYL Glycosyl hydrolase family 43, beta-D-xylo | 97.71 | |
| cd08981 | 291 | GH43_2 Glycosyl hydrolase family 43. This glycosyl | 97.71 | |
| smart00640 | 437 | Glyco_32 Glycosyl hydrolases family 32. | 97.67 | |
| cd08997 | 349 | GH68 Glycosyl hydrolase family 68, includes levans | 97.57 | |
| cd09004 | 275 | GH43_bXyl Glycosyl hydrolase family 43, includes m | 97.51 | |
| PF13088 | 275 | BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A | 97.44 | |
| cd08988 | 279 | GH43_ABN Glycosyl hydrolase family 43. This glycos | 97.32 | |
| cd08985 | 265 | GH43_6 Glycosyl hydrolase family 43. This glycosyl | 97.29 | |
| COG2152 | 314 | Predicted glycosylase [Carbohydrate transport and | 97.25 | |
| cd08980 | 288 | GH43_1 Glycosyl hydrolase family 43. This glycosyl | 97.17 | |
| cd00260 | 351 | Sialidase Sialidases or neuraminidases function to | 97.15 | |
| cd09001 | 269 | GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xy | 97.12 | |
| cd09003 | 311 | GH43_AXH_1 Glycosyl hydrolase family 43. This glyc | 96.89 | |
| COG3507 | 549 | XynB Beta-xylosidase [Carbohydrate transport and m | 96.84 | |
| cd09000 | 288 | GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xy | 96.84 | |
| PF13088 | 275 | BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A | 96.24 | |
| PF03664 | 271 | Glyco_hydro_62: Glycosyl hydrolase family 62 ; Int | 96.18 | |
| cd08982 | 295 | GH43_3 Glycosyl hydrolase family 43. This glycosyl | 95.76 | |
| PF00251 | 308 | Glyco_hydro_32N: Glycosyl hydrolases family 32 N-t | 95.73 | |
| cd08987 | 303 | GH62 Glycosyl hydrolase family 62, characterized a | 94.91 | |
| cd00260 | 351 | Sialidase Sialidases or neuraminidases function to | 94.02 | |
| PF13859 | 310 | BNR_3: BNR repeat-like domain; PDB: 3B69_A. | 92.27 | |
| COG3940 | 324 | Predicted beta-xylosidase [General function predic | 87.06 | |
| PTZ00334 | 780 | trans-sialidase; Provisional | 86.69 |
| >KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-123 Score=1003.03 Aligned_cols=522 Identities=49% Similarity=0.864 Sum_probs=483.7
Q ss_pred CCCcccccccccceeecCCCCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCCCC
Q 005279 110 WTNNMLSWQRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIM 189 (704)
Q Consensus 110 ~~~~~~~w~Rp~~Hf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~ 189 (704)
|++...+++||.|||||++|||||| +|++|+|||||||||.+++||+++||||||+|||||+.+|+||.|++++|.+
T Consensus 41 ~~~~~n~~~Rp~~HFqP~k~wMN~P---~~ykG~yHLFyQyNP~gavwg~ivWGHavSkDLinW~~lp~Ai~Ps~~~din 117 (571)
T KOG0228|consen 41 PSNTVNQPDRPGFHFQPPKGWMNDP---MYYKGKYHLFYQYNPKGAVWGNIVWGHAVSKDLINWEALPPAIAPSEWFDIN 117 (571)
T ss_pred ccccccccCCceeecCCCcccccCc---cccCcEEEEEEecCCCCceeeeeEeeeecchhhccccccCcccCCCCccccC
Confidence 5677778999999999999999988 9999999999999999999999999999999999999999999999999999
Q ss_pred cEEeeeEEEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCC--CCCCCcCccCCeeEEecCCC
Q 005279 190 GVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPP--PGIGAKDFRDPTTAWLTSEG 267 (704)
Q Consensus 190 Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p--~g~~~~~fRDP~Vvw~~~~g 267 (704)
|||||||+++++|+.++||||...+..|+|.+|++.|.+||.|++|.|.++||++.++ .++....||||+|+|++++|
T Consensus 118 g~wSGSati~~~~~~vilytg~d~~~rqVqn~a~p~d~sdp~l~~w~k~~gnp~~~p~~V~~in~s~FRDPttaW~~~dg 197 (571)
T KOG0228|consen 118 GCWSGSATIDPNNSPVILYTGIDPNNRQVQNYAYPKDVSDPQLIAWSKDGGNPFMKPDKVLGINSSQFRDPTTAWFGQDG 197 (571)
T ss_pred ccccceEEEccCCCeEEEecccCcCceEEEEEeccCCCCchhhheeecCCCceeeccccccCCChhhccCCceeeecCCC
Confidence 9999999999999999999999988889999999999999999999999999999988 78888999999999999999
Q ss_pred eEEEEEeeecCCeeEEEEEEeCCCCCcEEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCCC
Q 005279 268 KWRIAIGSRINRTGITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDR 347 (704)
Q Consensus 268 ~w~Mv~Gs~~~~~G~~llY~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~~ 347 (704)
+|+|++|++.+++|.+++|+|+||++|+....++|....+||||||||||++.++.+|++.+..|+..|||+++|+++++
T Consensus 198 kWrm~vgsk~~q~g~a~~Y~S~Df~~W~k~~~~~h~~~~tgmwECPdffpVs~tg~~g~d~s~~~~~nkhvlkasl~gt~ 277 (571)
T KOG0228|consen 198 KWRMTVGSKIKQRGKAIIYSSDDFKHWTKSSVPLHSGDLTGMWECPDFFPVSITGTDGLDWSLFGSINKHVLKASLGGTS 277 (571)
T ss_pred cEEEEEEeecCccceEEEEeccchhhhhcccccccccCccceEECCCcEEecccCCCCceEEEeccccccccccccCCce
Confidence 99999999988889999999999999999999999888889999999999999999999999999888999999999999
Q ss_pred ceEEEEEEeeCCceeeecCCCccccccceeeccCCCcccceeecCCCCcEEEEEeeCCCCCccccccCCCCCCCCccEEE
Q 005279 348 HDYYAIGTYHEKNVTWVPDNPEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQGIPRTV 427 (704)
Q Consensus 348 ~~~Y~iG~~d~~~~~f~p~~~~~D~g~g~~lD~G~fYA~qtf~d~~~gRrIl~GW~~~~d~~~~~~~~gWag~lslPRel 427 (704)
+++|+||+||+++.+|+|++...++..++|+|||+|||+|||+|..++|||+|||++|+++..++.++||+|+|+|||++
T Consensus 278 ~d~Y~IG~yd~~~~~fvpd~~~~~~~~dlr~Dyg~~YASkTFfds~~~rrIlwgWa~es~~~~dd~~kgw~g~qtipRki 357 (571)
T KOG0228|consen 278 NDQYFIGTYDGEKDTFVPDDGFSRVSVDLRYDYGKYYASKTFFDSVKGRRILWGWASESDYTNDDPTKGWRGLQTIPRKI 357 (571)
T ss_pred eEEEEEecccCCcceeeccCCcccccccccccchhhhhhhhhccccCCcEEEEEecccCcccccchhcccccccccceEE
Confidence 99999999999889999999888877788999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCceEEeecHHHHHhhhcccccccceEeCCCceeeccCCCccceeeEEEEEechhhhhhc--cc---ccceeeec
Q 005279 428 ALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVAEFELDKAALEKT--AE---SNVEFSCS 502 (704)
Q Consensus 428 ~L~~~~G~~L~q~Pv~Ele~LR~~~~~~~~~~~~~gs~~~l~~~~~~~ldi~a~f~~~~~~l~~~--~~---~~~~~~~~ 502 (704)
.|++..|..|.|||++|+|.||.......+..+++|+..+....++.|.|++++|++. .||.. .+ ++-.+.|.
T Consensus 358 ~Ld~~s~k~l~qwpv~eie~Lr~~~v~~~~~~~~~g~~~~v~~~t~~q~dvev~f~~~--~Leka~~~~~~~t~~~~~c~ 435 (571)
T KOG0228|consen 358 WLDTESGKQLTQWPVEEIEPLRLSNVKMDNKLFKPGSLNEVSGITAAQADVEVTFEVE--DLEKAIVIEPSWTDPQFLCL 435 (571)
T ss_pred EeeccCCCcccccchheeecccccccCccccccCCceeEEecccccccccceEEEEec--ccccccccCccccccceeee
Confidence 9998678899999999999999988776777889999999999999999999999886 34432 11 22357798
Q ss_pred CCCCCcccccccceEEEEEEcCCCCceeeEEEEEeeCCCCceeEeEEecCCCCCcccccc-ccccceeeEeecCcchhhh
Q 005279 503 SSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSSTGRREILN-ESIGEHISCYCPNEHMYML 581 (704)
Q Consensus 503 ~~~ga~~rg~~g~fGl~v~a~~~~~e~t~v~f~~~~~~dg~~~~~~~~Dr~rSs~~~~~~-~~~G~~~~~~~Pv~~~~~~ 581 (704)
+ +++..++.+|||||.++++.+++|+|+++|.+.|.+. ...+.+|.|..|||++.|.. ..+|. .+++
T Consensus 436 ~-~~~~v~~~~gpfgl~~la~~dl~eyt~v~f~i~k~~~-~~~v~~csd~~~sSl~~d~~k~~~~a----fvdv------ 503 (571)
T KOG0228|consen 436 T-GGSSVREGLGPFGLMVLASSDLEEYTPVGFRIFKAKK-KYVVLMCSDQSRSSLAEDNYKPSIGA----FVDV------ 503 (571)
T ss_pred c-CCcccccCCCcceEEEEeecCcccceeeeEEEeecCC-cceeEEeccCCCccccccccccceee----EEEe------
Confidence 8 7788899999999999999999999999999999876 56778999999999998886 77787 7887
Q ss_pred hccccccccccceEEEEEEEeCCeEEEEEeCCeeEEEEeeecCcccCCccEEEEEeCCCCcEEEEEEEEeecccc
Q 005279 582 ALSIESSQSIWNIVYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNSA 656 (704)
Q Consensus 582 ~l~~e~~~~~~~~l~LrI~VD~SivEvF~n~Gr~v~TsRvYP~~~~~~~~~v~lf~~~~~~~v~~sl~iw~m~s~ 656 (704)
...++ ++||+||||||||.|+|+||+|+|+||||+.++..++.+|+||+|.......++.+|+|+++
T Consensus 504 -~~~~~-------islr~LiDhsivEsyg~~G~t~iTsrvyp~~ai~~~~~lf~fn~g~~~v~v~sl~aw~m~~~ 570 (571)
T KOG0228|consen 504 -YPHQK-------ISLRSLIDHSIVESYGNGGKTVITSRVYPTLAIGEGAHLFVFNNGSQLVNVTSLNAWSMKNA 570 (571)
T ss_pred -cCCCc-------cchhhhhhhhhHHHhccCCcEEEEeeeeeeecccccceEEEecccccceEEEEeehhhcccC
Confidence 34677 99999999999999999999999999999999999999999999887655559999999886
|
|
| >COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-96 Score=815.53 Aligned_cols=446 Identities=33% Similarity=0.611 Sum_probs=354.8
Q ss_pred cccccceeecCCCCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCCCCcEEeeeE
Q 005279 117 WQRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSA 196 (704)
Q Consensus 117 w~Rp~~Hf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSa 196 (704)
-+||.|||+||.||||||||++|++|+|||||||||+++.||++|||||+|+|||||+++|+||.|+.+||.+|||||||
T Consensus 27 ~~Rp~yHftP~~G~mNDPNG~iy~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~piaL~Pd~~~d~~g~ySGSA 106 (486)
T COG1621 27 PYRPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHGPKHWGHAVSKDLVHWEHLPIALAPDDDYDSHGCYSGSA 106 (486)
T ss_pred CCCceeeecCCcCceECCCceeEECCEEEEEEecCCCCCCCCCceeeeeccCCcccceECCceecCCCccccCCceeeeE
Confidence 35999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCcEEEEEecccC----CceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEE
Q 005279 197 TILPDGKLMMLYTGSTN----ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIA 272 (704)
Q Consensus 197 vv~~dG~~~~~YTG~~~----~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv 272 (704)
|+ .+|.+.+||||+.+ .+.|.||+|+|+|+ .+|+|+.+|||+..|+++ +.|||||||+| +++|+|+|+
T Consensus 107 V~-~~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg-----~~f~K~~~~~i~~~p~~~-t~hFRDPKv~w-~~~~~~~~m 178 (486)
T COG1621 107 VV-DDGNLSLFYTGNVRDSNGIRQQTQCIAYSEDG-----GTFEKYSGNPIIDQPEGY-TPHFRDPKVVW-DEGGKWWMM 178 (486)
T ss_pred EE-eCCcEEEEEccceeccCCcceeEEEEEEEcCC-----CceEeccCCceecCCCcc-cccCCCCcccc-cCCCcEEEE
Confidence 75 68999999999975 35689999999995 789998789999999988 79999999999 578899999
Q ss_pred Eeeec-CCeeEEEEEEeCCCCCcEEecceeccCCCC-CceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCC----
Q 005279 273 IGSRI-NRTGITFVYDTKDFINYELLRGVLHGVPNT-GMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDD---- 346 (704)
Q Consensus 273 ~Gs~~-~~~G~~llY~S~Dl~~W~~~~~l~~~~~~~-gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~---- 346 (704)
+|++. +..|.+++|+|+||++|++.++|..+..+. +||||||||+|++.. .+ .+|++..+.++.
T Consensus 179 lgAq~~~~~g~i~lY~S~DL~~W~~~g~~~~~~~~~gym~ECPdlf~l~~~~--~~--------~~~pqg~~~~~~~~~n 248 (486)
T COG1621 179 LGAQGEDLKGTILLYESDDLKNWQFTGEFGLEQGGLGYMWECPDLFELDGED--VL--------LFWPQGLSINGGEYDN 248 (486)
T ss_pred EEEecCCCCceEEEEeCCCccCcEEEEeeccCCCceeeEEECCCeEEecCcC--ce--------EEcceeeecCCCcCCC
Confidence 99986 668999999999999999999998763444 499999999999754 23 344444554432
Q ss_pred -CceEEEEEEeeCCceeeecCCCccccccceeeccC-CCcccceeecCCCCcEEEEEeeCCCCCc--cccccCCCCCCCC
Q 005279 347 -RHDYYAIGTYHEKNVTWVPDNPEIDVGIGIRYDYG-LFYASKTFYDQNKKRRVLWGWIGESDSE--IADVKKGWASLQG 422 (704)
Q Consensus 347 -~~~~Y~iG~~d~~~~~f~p~~~~~D~g~g~~lD~G-~fYA~qtf~d~~~gRrIl~GW~~~~d~~--~~~~~~gWag~ls 422 (704)
....|++|+||++ +|++.... ..+||+| +|||+|||.++ ++|||++|||++|+.. .|+...||+||||
T Consensus 249 ~~~~~Y~vG~~dg~--~f~~~~~~-----~~~LD~G~DfYApQtf~~~-dgrri~igWmg~w~~~~~~PT~~~~w~~~mT 320 (486)
T COG1621 249 IYQSGYFVGDFDGK--EFKLDDGQ-----FRELDFGFDFYAPQTFLDP-DGRRILIGWMGNWDYTNNYPTIDEGWRGAMT 320 (486)
T ss_pred cceeEEEEEeeccc--eeEecCCC-----ceecccCccccceeeccCC-CCCEEEEEeccCccccCCCCccccCcCccce
Confidence 3467999999997 56655542 3589999 89999999995 8999999999999987 6677789999999
Q ss_pred ccEEEEEccCCCceEEeecHHHHHhhhcccccccceEeCCCceeeccCCCccceeeEEEEEechhhhhhcccccceeeec
Q 005279 423 IPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVAEFELDKAALEKTAESNVEFSCS 502 (704)
Q Consensus 423 lPRel~L~~~~G~~L~q~Pv~Ele~LR~~~~~~~~~~~~~gs~~~l~~~~~~~ldi~a~f~~~~~~l~~~~~~~~~~~~~ 502 (704)
|||||+|. +| +|+|+|++||++||.....+.++.+... ..+....+.++++...+.. .|.
T Consensus 321 lpRel~l~--~~-~L~Q~Pi~~l~~lr~~~~~~~~~~~~~~--~~l~~~~~~~~~l~~~~~~---------------~~~ 380 (486)
T COG1621 321 LPRELTLE--DG-KLYQTPVRELESLRKPEEAAHNTTLSGN--SKLELPSGDAYELDLDLIW---------------TDA 380 (486)
T ss_pred eeEEEEEc--CC-eEEecchHHHHhhhcccccccccccccc--eeeeccCCccEEEEEEeec---------------ccc
Confidence 99999995 45 8999999999999999766666666554 2233333444444222211 111
Q ss_pred CCCCCcccccccceEEEEEEcCCCCceeeEEEEEeeCCCCceeEeEEecCCCCCccccccccccceeeEeecCcchhhhh
Q 005279 503 SSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSSTGRREILNESIGEHISCYCPNEHMYMLA 582 (704)
Q Consensus 503 ~~~ga~~rg~~g~fGl~v~a~~~~~e~t~v~f~~~~~~dg~~~~~~~~Dr~rSs~~~~~~~~~G~~~~~~~Pv~~~~~~~ 582 (704)
..+|+.++.+.. .|.+.... ..++.||++| ......+|..| .+++
T Consensus 381 -----------~~~~~~l~~~~~-----~~~~~~~~-------~~l~ldR~~s---~~f~~~~~~~r--~~~~------- 425 (486)
T COG1621 381 -----------TSFGLELRMGLN-----LVGYDVEN-------ETLTLDRSDS---PLFTVQDGETR--ECFI------- 425 (486)
T ss_pred -----------ceEEEEeecCcc-----eecccccc-------ceEEEecccc---ccccccCCcee--eecc-------
Confidence 137787776653 23332221 1378899988 22234556644 3333
Q ss_pred ccccccccccceEEEEEEEeCCeEEEEEeCCeeEEEEeeecCcccCCccEEEEEeCCCCcEEEEEEEEeeccc
Q 005279 583 LSIESSQSIWNIVYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNS 655 (704)
Q Consensus 583 l~~e~~~~~~~~l~LrI~VD~SivEvF~n~Gr~v~TsRvYP~~~~~~~~~v~lf~~~~~~~v~~sl~iw~m~s 655 (704)
..+.+ ++||||||+|+||||+|+|+.|+|+|+||... ..++.|+...+.+.+ ...+|.+++
T Consensus 426 ~~~~~-------v~l~if~D~ssvEiF~NdGe~v~T~rifp~~~---~~~i~l~~~~g~~~~--~~~~~~l~~ 486 (486)
T COG1621 426 ENGAK-------VHLRIFVDNSSVEIFINDGEKVFTSRIFPTPD---ANGISLYSDQGVAVV--QNTIWPLKS 486 (486)
T ss_pred CCCce-------EEEEEEEeCCeEEEEEcCCceEEEEEecCCCc---ccceEEEccCceEEE--EeeeeccCC
Confidence 22344 79999999999999999999999999999985 467888876554433 447888764
|
|
| >TIGR01322 scrB_fam sucrose-6-phosphate hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-89 Score=761.67 Aligned_cols=413 Identities=31% Similarity=0.561 Sum_probs=327.4
Q ss_pred cccccceeecCCCCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCCCCcEEeeeE
Q 005279 117 WQRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSA 196 (704)
Q Consensus 117 w~Rp~~Hf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSa 196 (704)
.+||+|||+|+.||||||||++|++|+|||||||||+++.||+++||||+|+|||||+++|+||.|+++||..|||||||
T Consensus 12 ~~rp~~H~~p~~gw~nDPng~~~~~G~yHlfyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~G~~sGsa 91 (445)
T TIGR01322 12 EWRPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHGLKSWGHYTSKDLVHWEDEGVALAPDDPYDSHGCYSGSA 91 (445)
T ss_pred CcCccCccCCCcCCccCCCcceEECCEEEEEEccCCCCCccCceEEEEEECCCccccEECCccCcCCCcccCCceEECeE
Confidence 35999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCcEEEEEecccC----CceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEE
Q 005279 197 TILPDGKLMMLYTGSTN----ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIA 272 (704)
Q Consensus 197 vv~~dG~~~~~YTG~~~----~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv 272 (704)
++ .+|+++|||||+.+ ...|.||+|+|.|+ .+|+|+. +|||.+++.....+||||+| |. .+|+|||+
T Consensus 92 v~-~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg-----~~~~k~~-~pvi~~~~~~~~~~fRDP~V-~~-~~g~~~M~ 162 (445)
T TIGR01322 92 VD-NNGQLTLMYTGNVRDSDWNRESYQCLATMDDD-----GHFEKFG-IVVIELPPAGYTAHFRDPKV-WK-HNGHWYMV 162 (445)
T ss_pred Ee-eCCEEEEEEeccccCCCCCeeEEEEEEEcCCC-----CeEEECC-CceEeCCCCCCcCcCCCCcE-Ee-ECCEEEEE
Confidence 75 78999999999753 24688999999985 6999984 59998755434578999996 53 47899999
Q ss_pred Eeeec-CCeeEEEEEEeCCCCCcEEecceeccC----CCC-CceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCC
Q 005279 273 IGSRI-NRTGITFVYDTKDFINYELLRGVLHGV----PNT-GMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDD 346 (704)
Q Consensus 273 ~Gs~~-~~~G~~llY~S~Dl~~W~~~~~l~~~~----~~~-gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~ 346 (704)
+|++. +..|++++|+|+||++|++.+.+.... ... .||||||||+|++ ||||.+|..+.
T Consensus 163 ~g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~~~~~~~~~g~~~ECPdlf~l~~---------------k~vL~~s~~g~ 227 (445)
T TIGR01322 163 IGAQTETEKGSILLYRSKDLKNWTFVGEILGDGQNGLDDRGYMWECPDLFSLDG---------------QDVLLFSPQGL 227 (445)
T ss_pred EEEecCCCceEEEEEECCCcccCeEecccccccccccCCccceEECCeEEEECC---------------cEEEEEecccc
Confidence 99875 456899999999999999999887542 223 3999999999963 67777765431
Q ss_pred ----------CceEEEEEEeeCCceeeecCCCccccccceeeccC-CCcccceeecCCCCcEEEEEeeCCCCCccccccC
Q 005279 347 ----------RHDYYAIGTYHEKNVTWVPDNPEIDVGIGIRYDYG-LFYASKTFYDQNKKRRVLWGWIGESDSEIADVKK 415 (704)
Q Consensus 347 ----------~~~~Y~iG~~d~~~~~f~p~~~~~D~g~g~~lD~G-~fYA~qtf~d~~~gRrIl~GW~~~~d~~~~~~~~ 415 (704)
....|++|+||..+.+|+|++. ..++|+| +|||+|||.++ ++||||||||++++...++...
T Consensus 228 ~~~~~~~~~~~~~~Y~vG~~d~~~~~f~~~~~------~~~lD~G~dfYA~qtf~~~-~gr~i~~gW~~~~~~~~~~~~~ 300 (445)
T TIGR01322 228 DASGYDYQNIYQNGYIVGQLDYEAPEFTHGTE------FHELDYGFDFYAPQTFLAP-DGRRILVAWMGLPEIDYPTDRD 300 (445)
T ss_pred CcccccccccccceeEEEEEECCCCEEecCCC------CceeccCcCceeeeeEECC-CCCEEEEEeCCCCccCCCCccC
Confidence 1357999999987789997643 2479999 79999999986 7999999999999887777788
Q ss_pred CCCCCCCccEEEEEccCCCceEEeecHHHHHhhhcccccccceEeCCCceeeccCCCccceeeEEEEEechhhhhhcccc
Q 005279 416 GWASLQGIPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVAEFELDKAALEKTAES 495 (704)
Q Consensus 416 gWag~lslPRel~L~~~~G~~L~q~Pv~Ele~LR~~~~~~~~~~~~~gs~~~l~~~~~~~ldi~a~f~~~~~~l~~~~~~ 495 (704)
||+|+|||||+|.|+ +| +|+|+|++||++||.+... . ... .....+... ..+++|+++|+..
T Consensus 301 ~W~g~lslpR~l~l~--~g-~L~~~Pv~el~~lr~~~~~--~-~~~-~~~~~~~~~-~~~~~l~~~~~~~---------- 362 (445)
T TIGR01322 301 GWAHCMTLPRELTLK--DG-KLVQTPLRELKALRTEEHI--N-VFG-DQEHTLPGL-NGEFELILDLEKD---------- 362 (445)
T ss_pred CcccccccCEEEEEe--CC-eEEEEEhHHHHHHhcCccc--c-ccc-cccccccCC-CceEEEEEEecCC----------
Confidence 999999999999995 46 8999999999999976532 0 111 111112111 2355665544321
Q ss_pred cceeeecCCCCCcccccccceEEEEEEcCCCCceeeEEEEEeeCCCCceeEeEEecCCCCCccccccccccceeeEeecC
Q 005279 496 NVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSSTGRREILNESIGEHISCYCPN 575 (704)
Q Consensus 496 ~~~~~~~~~~ga~~rg~~g~fGl~v~a~~~~~e~t~v~f~~~~~~dg~~~~~~~~Dr~rSs~~~~~~~~~G~~~~~~~Pv 575 (704)
+ ...|||.+ .+. ++.+.|.|+..++ .+++||++++.... ++..+ .+++
T Consensus 363 ----------~------~~~~~l~~-~~~--~~~~~i~~~~~~~-------~l~~dr~~~~~~~~----~~~~~--~~~~ 410 (445)
T TIGR01322 363 ----------S------AFELGLAL-TNK--GEETLLTIDADEG-------KVTLDRRSSGNLED----YGGTR--SCPL 410 (445)
T ss_pred ----------C------ccEEEEEE-eCC--CCeEEEEEECcCC-------EEEEEccCCCCcCC----ccceE--EEEc
Confidence 0 11478887 442 4679999976542 37889998864321 22222 3343
Q ss_pred cchhhhhccccccccccceEEEEEEEeCCeEEEEEeCCeeEEEEeeecC
Q 005279 576 EHMYMLALSIESSQSIWNIVYVYLQVDHSIVEGFAQGGRTTITSRVYPT 624 (704)
Q Consensus 576 ~~~~~~~l~~e~~~~~~~~l~LrI~VD~SivEvF~n~Gr~v~TsRvYP~ 624 (704)
..+++ ++||||||+|+||||+|||+.|||+||||+
T Consensus 411 -------~~~~~-------~~l~i~vD~s~vEvFvn~G~~~~t~riyp~ 445 (445)
T TIGR01322 411 -------PNTKK-------VSLHIFIDKSSVEIFINDGEEVMTSRIFPD 445 (445)
T ss_pred -------CCCCe-------EEEEEEEECCEEEEEECCCEEEEEEeccCC
Confidence 23355 899999999999999999999999999995
|
|
| >smart00640 Glyco_32 Glycosyl hydrolases family 32 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-87 Score=741.30 Aligned_cols=423 Identities=51% Similarity=0.927 Sum_probs=328.8
Q ss_pred eeecCCCCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCCCCcEEeeeEEEecCC
Q 005279 123 HFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDG 202 (704)
Q Consensus 123 Hf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG 202 (704)
||+|+.||||||||++|++|+|||||||+|+++.||+++||||+|+|||||+++|+||.|+.+||.+|||||||++ .+|
T Consensus 1 H~~p~~gw~NDPnGl~~~~G~yHlFyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~aL~P~~~~d~~g~~sGsav~-~~~ 79 (437)
T smart00640 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGPVWGNIHWGHAVSKDLVHWTHLPVALAPDEWYDSNGVFSGSAVI-DPG 79 (437)
T ss_pred CCCCCcCccCCCCeeeEECCEEEEEEecCCCCCCCCCeEEEEEEcCCcceeeecCcccCCCCcCCCCcEEEEEEEE-CCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999976 577
Q ss_pred cEEEEEecccCC-------ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEee
Q 005279 203 KLMMLYTGSTNE-------SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGS 275 (704)
Q Consensus 203 ~~~~~YTG~~~~-------~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs 275 (704)
+++|||||+... ..+.|+.|.+.| +++|+|+++||||.++++....+||||+|+|. ++|+|||++|+
T Consensus 80 ~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d-----~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~-~~~~~~m~~g~ 153 (437)
T smart00640 80 NLSLLYTGNVAIDTNVQVQRQAQQLAASDDL-----GGTWTKYPGNPVLVPPPGIGTEHFRDPKVFWY-DGDKWYMVIGA 153 (437)
T ss_pred ceEEEEcCCcccccccCcccEEEEEEEECCC-----CCeeEECCCCcEEeCCCCCCCCCcCCCCccEE-CCCEEEEEEEE
Confidence 799999998421 223335555544 38999998899999777666789999998785 34799999998
Q ss_pred ec-CCeeEEEEEEeCCCCCcEEecceeccC-CCC-CceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCCCceEEE
Q 005279 276 RI-NRTGITFVYDTKDFINYELLRGVLHGV-PNT-GMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYA 352 (704)
Q Consensus 276 ~~-~~~G~~llY~S~Dl~~W~~~~~l~~~~-~~~-gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~~~~~Y~ 352 (704)
+. ++.|++++|+|+||++|++.+.++... ... +||||||||+|++++ .+.||||++|..+....+|.
T Consensus 154 ~~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~g~~wECPdlf~l~~~~----------~~~~~vLi~s~~g~~~~~y~ 223 (437)
T smart00640 154 SDEDKTGIALLYRSTDLKNWTLLGELLHSGVGDTGGMWECPDLFPLPGDG----------DTSKHVLKVSPQGGSGNYYF 223 (437)
T ss_pred EecCCCeEEEEEECCCcccCeECCcccccCCCCccceEECCcEEEeCCCC----------CceeEEEEECcCCCCccEEE
Confidence 75 567999999999999999999987542 333 599999999998654 23699999999876778999
Q ss_pred EEEeeCCceeeecCCCccccccceeeccC-CCcccceeecCCCCcEEEEEeeCCCCCc-cccccCCCCCCCCccEEEEEc
Q 005279 353 IGTYHEKNVTWVPDNPEIDVGIGIRYDYG-LFYASKTFYDQNKKRRVLWGWIGESDSE-IADVKKGWASLQGIPRTVALD 430 (704)
Q Consensus 353 iG~~d~~~~~f~p~~~~~D~g~g~~lD~G-~fYA~qtf~d~~~gRrIl~GW~~~~d~~-~~~~~~gWag~lslPRel~L~ 430 (704)
+|.|++. .+|+|+... +...+.++|+| +|||+|||.++..+||||||||++++.. ...+..||+|+|||||||+|+
T Consensus 224 ~G~~~g~-~~f~~~~~~-~~~~~~~lD~G~dfYA~qt~~~~~~~r~i~~gW~~~~~~~~~~~p~~~W~g~~tlPRel~l~ 301 (437)
T smart00640 224 VGYFDGS-DQFTPDDPE-DVGIGLRLDYGFDFYASQTFYDPDGNRRILIGWMGEWDSYADDVPTKGWAGALSLPRELTLD 301 (437)
T ss_pred EEEEcCc-eeEeECCcc-ccCccceEecCCCceeeeeeecCCCCcEEEEEecCCCccccccCCCCCccccceeCeEEEEE
Confidence 9999973 479987653 22334589999 8999999999755699999999999742 222338999999999999996
Q ss_pred cCCCceEEeecHHHHHhhhcccccccceEeCCCceeeccC--CCccceeeEEEEEechhhhhhcccccceeeecCCCCCc
Q 005279 431 TKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDV--GSATQLDIVAEFELDKAALEKTAESNVEFSCSSSEGSA 508 (704)
Q Consensus 431 ~~~G~~L~q~Pv~Ele~LR~~~~~~~~~~~~~gs~~~l~~--~~~~~ldi~a~f~~~~~~l~~~~~~~~~~~~~~~~ga~ 508 (704)
.++| +|+|+|++||++||.. .......+..+....+.. ..+.+++|+++|+.... +
T Consensus 302 ~~~g-~L~~~Pv~el~~lr~~-~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~------------------~-- 359 (437)
T smart00640 302 KTGG-KLLQWPVEELESLRNV-KELSNLTLKPGSVNELLGLTASGDAYEIELSFEVDSG------------------G-- 359 (437)
T ss_pred ecCC-EEEEeecHHHHhhhCc-ccccceeecCCceeeeecccCCccEEEEEEEEEeCCC------------------c--
Confidence 4466 7999999999999954 223334444332222211 23456777777765321 0
Q ss_pred ccccccceEEEEEEcCCCCceeeEEEEEeeCCCCceeEeEEecCCCCCccccccccccceeeEeecCcchhhhhcccccc
Q 005279 509 ERGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSSTGRREILNESIGEHISCYCPNEHMYMLALSIESS 588 (704)
Q Consensus 509 ~rg~~g~fGl~v~a~~~~~e~t~v~f~~~~~~dg~~~~~~~~Dr~rSs~~~~~~~~~G~~~~~~~Pv~~~~~~~l~~e~~ 588 (704)
.++|||.++++++.++.|.|.|+..++ .+++||++++... ...+...+...+++ ..+++
T Consensus 360 ----~~~~~l~~~~~~~~~~~~~i~~~~~~~-------~l~vdR~~~~~~~--~~~~~~~~~~~~~~-------~~~~~- 418 (437)
T smart00640 360 ----AGPFGLLVLASEDLSEQTAVYFDVSKG-------TLCLDRRSSGTSN--DEVFKGVRGATVPV-------DPGET- 418 (437)
T ss_pred ----ceeEEEEEEeCCCCCceEEEEEEcCCe-------EEEEecCCCCCCc--ccccccceeeeeec-------CCCCe-
Confidence 125899999998888899999976542 3788997765311 11122222112233 23455
Q ss_pred ccccceEEEEEEEeCCeEEEEEeCC
Q 005279 589 QSIWNIVYVYLQVDHSIVEGFAQGG 613 (704)
Q Consensus 589 ~~~~~~l~LrI~VD~SivEvF~n~G 613 (704)
++||||||+|+||||+|||
T Consensus 419 ------~~lri~vD~ssvEvf~ndG 437 (437)
T smart00640 419 ------LSLRILVDHSSVEIFANGG 437 (437)
T ss_pred ------EEEEEEEeceEEEEEeCCC
Confidence 9999999999999999987
|
|
| >PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure [] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-77 Score=637.13 Aligned_cols=299 Identities=44% Similarity=0.904 Sum_probs=250.1
Q ss_pred eeecCCCCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCCCCcEEeeeEEEecCC
Q 005279 123 HFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDG 202 (704)
Q Consensus 123 Hf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG 202 (704)
||+|++||||||||++|++|+|||||||||+++.||+++||||+|+|||||+++|+||.|++++|++|||||||+++ ++
T Consensus 1 H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~aL~P~~~~d~~g~~SGs~~~~-~~ 79 (308)
T PF00251_consen 1 HFTPPKGWMNDPNGLVYYDGKYHLFYQYNPFGPEWGNMHWGHATSKDLVHWEHLPVALPPDEEYDADGCFSGSAVVD-DD 79 (308)
T ss_dssp SBB-SSEEEEEEEEEEEETTEEEEEEEEETTSSSS-SBEEEEEEESSSSSEEEEEEEE-SSSGGGTTEEEEEEEEEE-TT
T ss_pred CCCCCCCCeECCccCeEeCCEEEEEeccCCCCcccceeEEEEEECCCCCCceeCCceEcccccCCcCccCcceEEEE-CC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999875 55
Q ss_pred cEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeC-CCceecC-CCCCCCcCccCCeeEEecCCCeEEEEEeeecCCe
Q 005279 203 KLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYP-GNPVLVP-PPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRT 280 (704)
Q Consensus 203 ~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~-~nPVl~~-p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~ 280 (704)
+++|||||+.+...|.|++|+|.|.+ .+|+|++ +||||.. |++ ...+||||+|+|.+ +++|+|++|++....
T Consensus 80 ~~~~~YTg~~~~~~~~q~~A~s~d~~----~~w~k~~~~~pvi~~~p~~-~~~~~RDP~v~~~~-~~~~~m~~g~~~~~~ 153 (308)
T PF00251_consen 80 NLVLFYTGNNRDGKQVQCLAYSTDDG----ITWTKYPQGNPVIPEPPPG-DTTDFRDPKVFWRE-DGRWYMLLGAGRDGR 153 (308)
T ss_dssp CEEEEEEEEETTTEEEEEEEEESSTT----SSEEE-TTTCESBESSSTT-SCTSEEEEEEEEEC-TTEEEEEEEEEETTE
T ss_pred EEEEEEeccCCCCCeEEEEEEECCCC----CceEEcCCCCcEEEecccC-CCCccccCeEEEec-CCEEEEEEeccccCc
Confidence 89999999987668999999997654 9999998 4999995 555 67999999988964 699999999998788
Q ss_pred eEEEEEEeCCCCCcEEecceeccCC-CCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEee----CCCCceEEEEEE
Q 005279 281 GITFVYDTKDFINYELLRGVLHGVP-NTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASM----DDDRHDYYAIGT 355 (704)
Q Consensus 281 G~~llY~S~Dl~~W~~~~~l~~~~~-~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~----~~~~~~~Y~iG~ 355 (704)
|++++|+|+||++|++.+.+..... ..+||||||||+|++++. .+...+|||++|. .....++|++|+
T Consensus 154 g~i~~y~S~Dl~~W~~~~~l~~~~~~~g~~~ECPdlf~l~~~~~-------~~~~~~~vl~~s~~g~~~~~~~~~Y~vG~ 226 (308)
T PF00251_consen 154 GCILLYTSDDLIHWEYLGPLFIPGDNGGGMWECPDLFPLDGKGD-------GTGKWVWVLIFSPQGIEDNGHGTYYMVGD 226 (308)
T ss_dssp EEEEEEEESSSSSEEEEEEESEEETTTSSEEEEEEEEEEEBTTS-------SSEEEEEEEEEEEESTTTTTTEEEEEEEE
T ss_pred ceEEEEEcCCcccCceeCcccccccccccccccceEEEECCccc-------ccceEEEEEEecccccccccccceEEeEE
Confidence 9999999999999999999876543 346999999999998621 0123568999998 345678999999
Q ss_pred eeCCceeeecCCCccccccceeeccC-CCcccceeecCCCCcEEEEEeeCCCCCcccc-ccCCCCCCCCccEEEEEccCC
Q 005279 356 YHEKNVTWVPDNPEIDVGIGIRYDYG-LFYASKTFYDQNKKRRVLWGWIGESDSEIAD-VKKGWASLQGIPRTVALDTKT 433 (704)
Q Consensus 356 ~d~~~~~f~p~~~~~D~g~g~~lD~G-~fYA~qtf~d~~~gRrIl~GW~~~~d~~~~~-~~~gWag~lslPRel~L~~~~ 433 (704)
||..+++|+++... ..++|+| +|||+|+|.++.++||||||||++++..... ...||+|+|||||||+|++ +
T Consensus 227 ~d~~~~~f~~~~~~-----~~~lD~G~dfYA~qtf~~~~~~r~i~~gW~~~~~~~~~~~~~~gW~g~lslPR~l~l~~-~ 300 (308)
T PF00251_consen 227 FDFDGGTFTPDDSS-----FQRLDYGFDFYAPQTFYDPDGGRRILIGWMGEWDYNADDYPTYGWAGCLSLPRELTLKD-E 300 (308)
T ss_dssp EETTTTEEEESSTT-----SEESBSSSS-EEEEEEEETTTTEEEEEEEES-TTTHHHHCHGHTEE-EE---EEEEEET-T
T ss_pred ecCCCCeeeeeccc-----cceeccCccccCCchhcCCCcCcEEEEEEecCCCcccccCCCCCCccEEEeCEEEEEEE-C
Confidence 98777899876221 4689999 5999999999755699999999999876333 3699999999999999965 3
Q ss_pred CceEEeec
Q 005279 434 GSNLLQWP 441 (704)
Q Consensus 434 G~~L~q~P 441 (704)
+.+|+|+|
T Consensus 301 ~~~L~q~P 308 (308)
T PF00251_consen 301 GGRLYQKP 308 (308)
T ss_dssp SSSEEEEE
T ss_pred CCeEEEcC
Confidence 45899998
|
; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A .... |
| >cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-67 Score=554.36 Aligned_cols=286 Identities=43% Similarity=0.804 Sum_probs=245.2
Q ss_pred CCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCCCCcEEeeeEEEecCCcEEEEE
Q 005279 129 NWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLY 208 (704)
Q Consensus 129 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~Y 208 (704)
||||||||++|++|+|||||||+|.++.||+++||||+|+|||||+++|+||.|+..+|..|||||||+++.+|+++|||
T Consensus 1 gw~nDPng~~~~~G~yhlfyq~~p~~~~~~~~~wgha~S~Dlv~W~~~~~al~p~~~~d~~g~~sGsav~~~~g~~~~~Y 80 (298)
T cd08996 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWGNMHWGHATSKDLVHWEHLPVALAPDDPYDSGGCFSGSAVVDDNGKLVLFY 80 (298)
T ss_pred CCcccCCeeeEECCEEEEEEcCCCCCCCCCCcEEEEEEecCccceeECCcccCCCCcccCCeEEeCeEEEcCCCcEEEEE
Confidence 89999999999999999999999999999999999999999999999999999988999999999999876559999999
Q ss_pred ecccC---CceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec-CCeeEEE
Q 005279 209 TGSTN---ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI-NRTGITF 284 (704)
Q Consensus 209 TG~~~---~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~-~~~G~~l 284 (704)
||+.. ...|.|++|+|.|. +.+|+|+..+|++.+ +.....+||||+|+|. +|+|+|++|++. +..|+++
T Consensus 81 Tg~~~~~~~~~~~~~lA~S~dd----g~~w~k~~~~~~~~~-~~~~~~~~RDP~V~~~--~g~~~m~~g~~~~~~~~~i~ 153 (298)
T cd08996 81 TGNVKLDGGRRQTQCLAYSTDD----GRTFTKYEGNPVIPP-PDGYTTHFRDPKVFWH--DGKWYMVLGAGTEDGTGRIL 153 (298)
T ss_pred eceeCCCCCceEEEEEEEEcCC----CCEEEECCCCceEcC-CCCCCCcccCCeEEeE--CCEEEEEEEEEecCCCcEEE
Confidence 99874 45799999999953 389999988998873 3345679999997663 499999999985 3568999
Q ss_pred EEEeCCCCCcEEeccee-ccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCC------CceEEEEEEee
Q 005279 285 VYDTKDFINYELLRGVL-HGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDD------RHDYYAIGTYH 357 (704)
Q Consensus 285 lY~S~Dl~~W~~~~~l~-~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~------~~~~Y~iG~~d 357 (704)
+|+|+||++|++.+.+. ......+|||||+||++++ +.||||++|..+. ...+|++|+||
T Consensus 154 ly~S~Dl~~W~~~~~~~~~~~~~~~~~EcP~l~~l~~-------------~~k~vL~~s~~~~~~~~~~~~~~y~~G~~~ 220 (298)
T cd08996 154 LYRSDDLKNWEYLGELLTSLGDFGYMWECPDLFPLDV-------------EGKWVLIFSPQGLEPEGNGSGTGYLVGDFD 220 (298)
T ss_pred EEECCCCCCCEEcceecccCCCccceEeCCcEEEECC-------------CCeEEEEECCCCCCCCCCccceEEEEEEEE
Confidence 99999999999988874 2222335999999999984 1389999987754 35689999999
Q ss_pred CCceeeecCCCccccccceeeccC-CCcccceeecCCCCcEEEEEeeCCCCCccccccCCCCCCCCccEEEEEccCCCce
Q 005279 358 EKNVTWVPDNPEIDVGIGIRYDYG-LFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQGIPRTVALDTKTGSN 436 (704)
Q Consensus 358 ~~~~~f~p~~~~~D~g~g~~lD~G-~fYA~qtf~d~~~gRrIl~GW~~~~d~~~~~~~~gWag~lslPRel~L~~~~G~~ 436 (704)
+. .|+++... ..++|+| +|||+|+|.++ ++||||||||++++...+....||+|+|||||+|.|++ ++ +
T Consensus 221 ~~--~~~~~~~~-----~~~lD~G~dfYA~q~~~~~-~~r~i~~gW~~~~~~~~~~~~~~w~g~ls~pr~l~l~~-~~-~ 290 (298)
T cd08996 221 GT--TFTFDHTE-----FGELDYGFDFYAPQTFVDP-DGRRILIGWMGNWDYEYPTPEDGWAGCLTLPRELSLKD-GG-R 290 (298)
T ss_pred CC--CCeEecCC-----ceEecCCCCeEeCceeeCC-CCCEEEEEEecCCCcCCCCCCCCceeeeEeCEEEEEcc-CC-E
Confidence 86 55554211 4689999 89999999996 79999999999999887888999999999999999975 33 8
Q ss_pred EEeecHHH
Q 005279 437 LLQWPVEE 444 (704)
Q Consensus 437 L~q~Pv~E 444 (704)
|+|+|++|
T Consensus 291 l~~~P~~e 298 (298)
T cd08996 291 LYQRPVRE 298 (298)
T ss_pred EEEEeCCC
Confidence 99999986
|
Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal |
| >cd08995 GH32_Aec43_like Glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-54 Score=452.60 Aligned_cols=266 Identities=26% Similarity=0.399 Sum_probs=221.1
Q ss_pred cCCCcceEECCEEEEEEeeCCCCCCC--CCcEEEEEEeCCCcceeeccccccc-CCCCCCCcEEeeeEEEecCCcEEEEE
Q 005279 132 NDPNGPVFYKGWYHLFYQYNPNGAIW--GDIVWGHAVSKDLIHWYHLPLAMVA-DQWYDIMGVWTGSATILPDGKLMMLY 208 (704)
Q Consensus 132 NDPNG~~y~~G~YHLFYQ~nP~~~~w--G~~~WGHAvS~DLvhW~~lp~AL~P-d~~yD~~Gv~SGSavv~~dG~~~~~Y 208 (704)
.|| .++|++|+||||||++|.+..| |+++||||+|+||+||+++++||.| +..+|..|||+|||++ .+|+++|||
T Consensus 1 ~d~-~~~~~~G~yhlfyq~~p~~~~~~~~~~~wgha~S~Dlv~W~~~~~al~~~~~~~d~~g~~sgs~~~-~~g~~~l~Y 78 (280)
T cd08995 1 GDP-MPFYDDGTFHIFYLHDPRNGPPEGLRHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGTGSVIK-GEGTYHAFY 78 (280)
T ss_pred CCc-cceEECCEEEEEEEcCCCCCCcccCCceEEEEEccCcCccEECcceecCCCCcccccCceEeEEEe-eCCEEEEEE
Confidence 388 5899999999999999999998 9999999999999999999999988 5577889999999975 679999999
Q ss_pred ecccCC--ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec-----CCee
Q 005279 209 TGSTNE--SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI-----NRTG 281 (704)
Q Consensus 209 TG~~~~--~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~-----~~~G 281 (704)
||+... ..|.|++|+|.|+ .+|+|.+.+||+.+++++...+||||+|+|.+.+|+|+|++|++. +..|
T Consensus 79 Tg~~~~~~~~~~i~~A~S~D~-----~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~~g 153 (280)
T cd08995 79 TGHNLDGKPKQVVMHATSDDL-----ITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRRG 153 (280)
T ss_pred EEECCCCCCcEEEEEEECCCC-----CccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCCCe
Confidence 998642 4688999999884 899999888999766666667899999777555799999999875 4568
Q ss_pred EEEEEEeCCCCCcEEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCC-CCceEEEEEEeeCCc
Q 005279 282 ITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDD-DRHDYYAIGTYHEKN 360 (704)
Q Consensus 282 ~~llY~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~-~~~~~Y~iG~~d~~~ 360 (704)
++.+|+|+||++|++.+.+... ....|||||++|++++ ||||++|..+ .....|++|+.. .
T Consensus 154 ~i~~~~S~Dl~~W~~~~~~~~~-~~~~~~E~P~l~~~~g---------------~~~L~~s~~~~~~~~~Y~~~~~~--~ 215 (280)
T cd08995 154 CIALFTSKDLKNWEYEEPFYAP-GLYFMPECPDLFKMGD---------------WWYLVYSEFSENRKTHYRVSKSP--F 215 (280)
T ss_pred EEEEEEeCCcCcceecCceecC-CCcceeecceEEEECC---------------EEEEEEEeccCCCcEEEEEeCCC--C
Confidence 9999999999999998876543 2335999999999963 8999998764 345679999622 2
Q ss_pred eeeecCCCccccccceeeccC-CCcccceeecCCCCcEEEEEeeCCCCCccccccCCCCCCCCccEEEEEccCCC
Q 005279 361 VTWVPDNPEIDVGIGIRYDYG-LFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQGIPRTVALDTKTG 434 (704)
Q Consensus 361 ~~f~p~~~~~D~g~g~~lD~G-~fYA~qtf~d~~~gRrIl~GW~~~~d~~~~~~~~gWag~lslPRel~L~~~~G 434 (704)
+.|..... ..+| | +|||+|||.++ +||||||||++++.+.++.++||+|+|| ||+|.+.+ +|
T Consensus 216 g~~~~~~~-------~~~d-g~dfYA~~~~~~~--~r~i~~gw~~~~~~~~~~~~~~w~~~l~-~~~~~~~~-~g 278 (280)
T cd08995 216 GPWRAPDD-------DTFD-GRAFYAAKTASDG--TRRFLFGWVPTKAGNDDDGNWEWGGNLV-VHELIQNE-DG 278 (280)
T ss_pred CCeEcCCc-------CccC-cccccceeEEEeC--CeEEEEEEecCCCCcccccCCccceEEE-eeEEEECC-CC
Confidence 35643221 1367 6 89999999995 9999999999999888888999999999 67788763 66
|
This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a |
| >cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-38 Score=324.62 Aligned_cols=242 Identities=28% Similarity=0.339 Sum_probs=191.7
Q ss_pred CCCcceEECCEEEEEEeeCCCCCCCC-CcEEEEEEeCCCcceeeccccc--ccCCCCCCCcEEeeeEEEecCCcEEEEEe
Q 005279 133 DPNGPVFYKGWYHLFYQYNPNGAIWG-DIVWGHAVSKDLIHWYHLPLAM--VADQWYDIMGVWTGSATILPDGKLMMLYT 209 (704)
Q Consensus 133 DPNG~~y~~G~YHLFYQ~nP~~~~wG-~~~WGHAvS~DLvhW~~lp~AL--~Pd~~yD~~Gv~SGSavv~~dG~~~~~YT 209 (704)
||+++. |+||||||++|.+..|+ ..+||||+|+||+||++.+.+| .|...+|..|||+|+++...+|+++|+||
T Consensus 8 ~~~~~~---g~yhlfy~~~~~~~~~~~~~~~~~a~S~D~~~w~~~~~~l~~~~~~~~~~~~~~~p~v~~~~dg~~~~~Yt 84 (276)
T cd08979 8 NPAVVV---GKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVVRDPDGTYRMFYT 84 (276)
T ss_pred CCceEe---eeEEEEEEccCcCcCCCCcceeEEEEcCCCCccEECCcCccCCCCCchhcCCeEcceEEEcCCCeEEEEEe
Confidence 565544 89999999999987765 4567999999999999999888 56778899999999998755599999999
Q ss_pred cccC--CceeeEEEEEeCCCCCCccceeEeeCCCcee-----cCCCCCCCcCccCCeeEEecCCCeEEEEEeeec-CCee
Q 005279 210 GSTN--ESVQVQNLAYPADPSDPLLIKWVKYPGNPVL-----VPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI-NRTG 281 (704)
Q Consensus 210 G~~~--~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl-----~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~-~~~G 281 (704)
|... ...|.|++|+|+|+ .+|+|.+.+|++ ..+......++|||+|++.+.+|+|+|++++.. +..+
T Consensus 85 ~~~~~~~~~~~i~~A~S~D~-----~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~~~ 159 (276)
T cd08979 85 GYDRPKGAVQRIGLATSKDL-----IHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDADERG 159 (276)
T ss_pred cccCCCCCcceEEEEECCCC-----CceEECCCCcceeeeecCCCCCcccccccccEEEEECCCCEEEEEEEeEccCCCc
Confidence 9873 45688999999984 899998777764 222333456899999766444499999999875 3457
Q ss_pred EEEEEEeCCCCCcEEeccee--ccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCC-CCceEEEEEEeeC
Q 005279 282 ITFVYDTKDFINYELLRGVL--HGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDD-DRHDYYAIGTYHE 358 (704)
Q Consensus 282 ~~llY~S~Dl~~W~~~~~l~--~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~-~~~~~Y~iG~~d~ 358 (704)
++.+|+|+|+++|++.+.+. .......+||||++|++++ +|+|.++... .....|.+|.++.
T Consensus 160 ~i~~a~S~D~~~W~~~~~~~~~~~~~~~~~~e~P~~~~~~g---------------~~~l~~~~~~~~~~~~y~vg~~~~ 224 (276)
T cd08979 160 AIGLATSPDLIHWTPVPPPPGPRTGYDDGQLEVPQVVKIDG---------------RWYLLYSGRNEDAKTGYRVGTALF 224 (276)
T ss_pred EEEEEECCCCCcceECCCCCCCCCcccCCcCccceEEEECC---------------EEEEEEEecCccCCccEEEEeccc
Confidence 89999999999999988762 2222345999999999962 7999988764 4567899998876
Q ss_pred CceeeecCCCccccccceeeccC-CCcccceeecCCCCcEEEEEeeCCC
Q 005279 359 KNVTWVPDNPEIDVGIGIRYDYG-LFYASKTFYDQNKKRRVLWGWIGES 406 (704)
Q Consensus 359 ~~~~f~p~~~~~D~g~g~~lD~G-~fYA~qtf~d~~~gRrIl~GW~~~~ 406 (704)
. .|+|.. ...+|+| +|||+|++.+..++||+++|||+++
T Consensus 225 ~--~~~~~~-------~~~~~~g~~~ya~~~~~~~~~~~~~~~gw~~~~ 264 (276)
T cd08979 225 G--PGRPLT-------LAELLDRTDLYAARPVPDGEGGGVVLEGFVQFG 264 (276)
T ss_pred C--Cccccc-------cccccCCCCceeEEeccccCCCcEEEEEEeecc
Confidence 4 455542 1357888 7999999998557999999999986
|
This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta |
| >cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=304.49 Aligned_cols=268 Identities=26% Similarity=0.391 Sum_probs=205.3
Q ss_pred cCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccc----cCCCCCCCcEEeeeEEEecCCcEEEE
Q 005279 132 NDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMV----ADQWYDIMGVWTGSATILPDGKLMML 207 (704)
Q Consensus 132 NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~----Pd~~yD~~Gv~SGSavv~~dG~~~~~ 207 (704)
|||| +++++|+||||||++|.+ ++++|+|++|+||+||++++.++. |..+++..++|+|+++...+|+++|+
T Consensus 1 ~DP~-i~~~~g~yyl~~~~~~~~---~~~~~~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~wap~v~~~~~g~~~l~ 76 (286)
T cd08772 1 ADPN-LIKYNGTYYIFFSGDDKN---GNPGIAHATSKDLVNWTDHPVALVWWARRGGPKDSGGIWAPSIVYIENGKFYLY 76 (286)
T ss_pred CCCe-EEEECCEEEEEEEccCCC---CCceEEEEECCCcCcceECCccchhhcccCCCCCCCcEecceEEEcCCCCEEEE
Confidence 7999 999999999999999976 789999999999999999999884 77778889999999987555999999
Q ss_pred EecccC-CceeeEEEEEeCCCCCCccceeEeeCCCceecC-CCCCCCcCccCCeeEEecCCCeEEEEEeeec-CCeeEEE
Q 005279 208 YTGSTN-ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVP-PPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI-NRTGITF 284 (704)
Q Consensus 208 YTG~~~-~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~-p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~-~~~G~~l 284 (704)
||+... ...|.|++|+|+|+. ..|++...+||+.. +......++|||+|++ +++|+|||++++.. +..+.+.
T Consensus 77 yt~~~~~~~~~~i~~a~s~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~-d~dG~~y~~~~~~~~~~~~~i~ 151 (286)
T cd08772 77 YTDVSFTKNQQTIGVATAEDGN----GPWTDYIGGPVLPDNPPAADVSNFRDPFVFE-DDDGKWYLVFGSGDHHNFGGIF 151 (286)
T ss_pred EEeecCCCCceeEEEEEcCCCC----CCCccccccccccCCCCccccccccCCeEEE-cCCCCEEEEEccccCCCCCeEE
Confidence 999763 346889999998863 45776655666653 3333456899999655 55699999999764 2356788
Q ss_pred EEEeCCCCCcEEecce--eccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCC------CCceEEEEEEe
Q 005279 285 VYDTKDFINYELLRGV--LHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDD------DRHDYYAIGTY 356 (704)
Q Consensus 285 lY~S~Dl~~W~~~~~l--~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~------~~~~~Y~iG~~ 356 (704)
+++|+|+.+|...+.. .......+++|||++|++++ +|+|..|... .....|++++.
T Consensus 152 ~~~s~d~~~w~~~~~~~~~~~~~~~~~~E~P~~~~~~g---------------~~yL~~s~~~~~~~~~~y~~~~~~~~~ 216 (286)
T cd08772 152 LYESDDDTTWKKGSAELLISEGEGGKQIEGPGLLKKNG---------------KYYLFYSINGTGRVDSTYSIGYARSES 216 (286)
T ss_pred EEEcCCCCCcccccceeeEeeccCCCceeccEEEEECC---------------EEEEEEEcCCCcCCCCCcceEEEEccC
Confidence 9999999999987764 22223346999999999863 7888888765 23456888765
Q ss_pred eCCceeeecCCCcc-ccccceeeccC-CCcccceeecCCCCcEEEEEeeCCCCCccccccCCCCCCCCccEEE
Q 005279 357 HEKNVTWVPDNPEI-DVGIGIRYDYG-LFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQGIPRTV 427 (704)
Q Consensus 357 d~~~~~f~p~~~~~-D~g~g~~lD~G-~fYA~qtf~d~~~gRrIl~GW~~~~d~~~~~~~~gWag~lslPRel 427 (704)
+ .+.|++..... -.-.....|.+ .+||++.|.++ ++|++|++|+.+++.... ...+|+++|+|||++
T Consensus 217 ~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~~ 285 (286)
T cd08772 217 D--TGPYVPKSDTSGGLSLTGGNDGGVGPYHAAAFNDA-GGRVVLVYHAYNVQYADA-PTYGWGRSLAIPRLL 285 (286)
T ss_pred C--CCCcccCCCCCCccccccccCCCCCCCccEEEECC-CCCEEEEEEeccCCcccc-ccCCCcccccccccc
Confidence 4 35676543210 00011234556 79999999986 799999999999875433 568999999999986
|
Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32 |
| >cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-25 Score=240.00 Aligned_cols=193 Identities=20% Similarity=0.198 Sum_probs=139.9
Q ss_pred cCCCcce-EECCEEEEEEeeCCCC----CCCCCcEEEEEEeCCCcceeecccccccCCCCCCCcEEeeeEEEecCCcEEE
Q 005279 132 NDPNGPV-FYKGWYHLFYQYNPNG----AIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMM 206 (704)
Q Consensus 132 NDPNG~~-y~~G~YHLFYQ~nP~~----~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~ 206 (704)
-|..|-+ -++|+.-+|+...|.. +.||++||||++|+||+||++.+ +|.|+.++|.+|||||||++..||+++|
T Consensus 8 ~d~~g~~~~~~G~~~vfaL~a~~~~~~~~rh~~~~wgh~~S~dlv~W~~~~-~l~p~~~~d~~g~wSGsa~~~~dg~~~l 86 (349)
T cd08997 8 QDRDGEVASYNGYEVIFALTADRNLDPDDRHGDARIGYFYSRAGGNWIDGG-KVFPDGLSPGSREWSGSATLDDDGTVQL 86 (349)
T ss_pred ECCCCCEEEECCEEEEEEEecCCCCCCCCCcCceEEEEEEeCCCCcccCCC-ccCCCCcccCCCeEcceEEEeCCCeEEE
Confidence 3566644 4688855999887764 57899999999999999999955 4678999999999999998777799999
Q ss_pred EEecccC----CceeeEEEEEeCCCCCCccceeEeeC--CCceecCC--------------CCCCCcCccCCeeEEecCC
Q 005279 207 LYTGSTN----ESVQVQNLAYPADPSDPLLIKWVKYP--GNPVLVPP--------------PGIGAKDFRDPTTAWLTSE 266 (704)
Q Consensus 207 ~YTG~~~----~~~q~q~lA~S~D~~D~~l~~W~K~~--~nPVl~~p--------------~g~~~~~fRDP~Vvw~~~~ 266 (704)
||||+.+ .+...|++|.+.+.. +..|.+.. ..+++.+. +.-...+||||+|+..+++
T Consensus 87 fYTg~~~~~~~~~~~~Q~ia~a~~~~---~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~ 163 (349)
T cd08997 87 FYTAVGRKGEPQPTFTQRLALARGTL---SVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPET 163 (349)
T ss_pred EEeccccCCCCCCCceEEEEEEECCC---cceEecccCccceeeeCCCceEEeccccccccccCccCcccCCEEEecCCC
Confidence 9999863 234667777665431 22333221 13444321 1112578999996554447
Q ss_pred CeEEEEEeeecC-C---------------------------eeEEEEE--EeCCCCCcEEecceeccCCCCCceeeeeeE
Q 005279 267 GKWRIAIGSRIN-R---------------------------TGITFVY--DTKDFINYELLRGVLHGVPNTGMWECVDFY 316 (704)
Q Consensus 267 g~w~Mv~Gs~~~-~---------------------------~G~~llY--~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf 316 (704)
|+|||+++++.. . .|+|.+. +++|+.+|++.++|+.+......||||++|
T Consensus 164 G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~dl~~W~~~~PL~~a~~v~d~~E~P~v~ 243 (349)
T cd08997 164 GKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKNDDLTEWKLLPPLLEANGVNDELERPHVV 243 (349)
T ss_pred CcEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCCCCCCcEEcCccccCCCcCCceEcceEE
Confidence 999999998752 2 2555554 778999999999998653334479999999
Q ss_pred EcCCCCCCCcccccCCCCcEEEEEEee
Q 005279 317 PVSTTGEHGLDTSHNGPGVKHVVKASM 343 (704)
Q Consensus 317 ~l~~~~~~gl~~~~~g~~~k~VL~~s~ 343 (704)
++++ ||+|+.|.
T Consensus 244 ~~~g---------------k~yL~~s~ 255 (349)
T cd08997 244 FHNG---------------KYYLFTIS 255 (349)
T ss_pred EECC---------------EEEEEEeC
Confidence 9963 88888773
|
Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n |
| >cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins | Back alignment and domain information |
|---|
Probab=99.87 E-value=4e-21 Score=202.73 Aligned_cols=190 Identities=20% Similarity=0.280 Sum_probs=140.3
Q ss_pred ceeecCCCCccCCCcceEE-CCEEEEEEeeCCCCCC---C-CCcEEEEEEeCCCc-ceeecccccccC--CCCCCCcEEe
Q 005279 122 FHFQPQKNWMNDPNGPVFY-KGWYHLFYQYNPNGAI---W-GDIVWGHAVSKDLI-HWYHLPLAMVAD--QWYDIMGVWT 193 (704)
Q Consensus 122 ~Hf~P~~gWmNDPNG~~y~-~G~YHLFYQ~nP~~~~---w-G~~~WGHAvS~DLv-hW~~lp~AL~Pd--~~yD~~Gv~S 193 (704)
.+|..+..++-+|. ++.. +|+||||||..|.+.. | ....||||+|+|+. +|+..+++|.|+ .++|..++++
T Consensus 4 ~~~~~~~~~~w~~~-vi~~~~g~y~lfy~~~~~~~~~~~~~~~~~i~~A~S~~~~g~w~~~g~vl~~~~~~~wd~~~~~~ 82 (291)
T cd08994 4 SGLEDEDYSVWGGS-IIKGPDGKYHLFASRWPEGLGFHGWLPYSEIVHAVSDTPEGPYTFQEVVLPGRGGGYWDARTTHN 82 (291)
T ss_pred ceeeeCCeEEEecc-eEECCCCcEEEEEEEccCCCCCCcccccceEEEEEcCCCCCCcEEeeeEcCCCCCCcccCCCccC
Confidence 56788888999996 5555 5899999999887644 2 23569999999987 899999999887 4688999999
Q ss_pred eeEEEecCCcEEEEEecccC-------CceeeEEEEEeCCCCCCccceeEeeCCCceecC-CC-----------------
Q 005279 194 GSATILPDGKLMMLYTGSTN-------ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVP-PP----------------- 248 (704)
Q Consensus 194 GSavv~~dG~~~~~YTG~~~-------~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~-p~----------------- 248 (704)
++++. .+|+++|+||+... ...+.+++|++.+. +.+|++. .+|||.+ +.
T Consensus 83 P~vi~-~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~----~g~w~~~-~~pvl~~~~~~~~~~~~~~p~v~~~~~ 156 (291)
T cd08994 83 PTIKR-FDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSL----DGPWKRS-DQPILEPRPGGWDNLITSNPAVTRRPD 156 (291)
T ss_pred CeEEE-ECCEEEEEEEcccCCcccccCCCCceEEEEEeCCC----CCCcEEC-CCceecCCCCccccccccCCCeEEeCC
Confidence 99975 67999999999753 22466777887653 1356654 3444422 00
Q ss_pred -------------------------------------------CCCCcCccCCeeEEecCCCeEEEEEeeecC----Cee
Q 005279 249 -------------------------------------------GIGAKDFRDPTTAWLTSEGKWRIAIGSRIN----RTG 281 (704)
Q Consensus 249 -------------------------------------------g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~----~~G 281 (704)
.....++|||+ ||. .+|+|+|++++..+ ..+
T Consensus 157 g~~~m~y~g~~~~~~~~~~~~gla~s~d~~g~~~~~~~~~v~~~~~~~~~~dP~-V~~-~~g~yym~~~~~~~~~~~~~~ 234 (291)
T cd08994 157 GSYLLVYKGGTYNPTKGNRKYGVAIADSPTGPYTKVSGPPFIEPGDNGNTEDPF-VWY-DKGQFHMIVKDMLGYVTGEKG 234 (291)
T ss_pred CCEEEEEeccccCCCCCcEEEEEEEeCCCCCCCEECCCCccccCCCCCceeCce-EEE-eCCEEEEEEeecccCcCCCCc
Confidence 01124679999 564 46999999998752 467
Q ss_pred EEEEEEeCCCCCcEEecceec----c-CC----CCCceeeeeeE-EcCC
Q 005279 282 ITFVYDTKDFINYELLRGVLH----G-VP----NTGMWECVDFY-PVST 320 (704)
Q Consensus 282 ~~llY~S~Dl~~W~~~~~l~~----~-~~----~~gmWECPdlf-~l~~ 320 (704)
.+.+|+|+|+++|++.+.+.. . .. ..+|||||++| ..++
T Consensus 235 ~i~~a~S~Dg~~W~~~~~~~~~~~~~~~~~~~~~~~~~erP~v~~~~~g 283 (291)
T cd08994 235 GGAYFRSKDGIHWKLAPGLAYSTTVEWTDGTTEDWGRLERPQVLLDEDG 283 (291)
T ss_pred eEEEEECCCCCCceecCcceeeeeEEcCCCcccccccccCCEEEEcCCC
Confidence 899999999999999887742 1 11 23599999999 7753
|
This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f |
| >cd08984 GH43_5 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.7e-19 Score=188.05 Aligned_cols=185 Identities=22% Similarity=0.272 Sum_probs=135.9
Q ss_pred CCCCCc-ccccccccceeecCCCC----ccCCCcceEECCEEEEEEeeCCCCC--CCCCcEEEEEEeCCCcceeeccccc
Q 005279 108 YPWTNN-MLSWQRTAFHFQPQKNW----MNDPNGPVFYKGWYHLFYQYNPNGA--IWGDIVWGHAVSKDLIHWYHLPLAM 180 (704)
Q Consensus 108 ~~~~~~-~~~w~Rp~~Hf~P~~gW----mNDPNG~~y~~G~YHLFYQ~nP~~~--~wG~~~WGHAvS~DLvhW~~lp~AL 180 (704)
+..+.. +..|.|...-+.+...| +.+|. +++++|+||||||++|..+ .++.++||||+|+||++|++.+.+.
T Consensus 51 ~a~S~D~l~~W~~~g~~~~~~~~~~~~~~WAP~-v~~~~G~y~myys~~~~~~~~~~~~~~i~~a~S~Dl~~w~~~~~~~ 129 (294)
T cd08984 51 VASSKDGGATWTYRGTADGLEFECGRNTFWAPE-VVWHGGVYHMYVTYIPGVPPDWGGPRRIVHYTSPNLWDWTFVGRVD 129 (294)
T ss_pred EEEeCCCCCCCEEeeeeccCCCCCcccceeCce-EEEECCEEEEEEEecCCCCcccCCCcEEEEEECCCcCcceECCccc
Confidence 444556 77887765433332233 34675 6889999999999998753 3467999999999999999988763
Q ss_pred ccCCCCCCCcEEeeeEEEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCee
Q 005279 181 VADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTT 260 (704)
Q Consensus 181 ~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~V 260 (704)
. +..++++++++.+.||+++|+||+... .+.+++|.|.|+ .+|++. .+++.. ...++|+|
T Consensus 130 ~-----~~~~~iD~~vf~~~dg~~yl~y~~~~~--~~~~~~a~s~D~-----~~w~~~--~~~i~~------~~~EgP~v 189 (294)
T cd08984 130 L-----DSDRVIDACVFKLPDGRWRMWYKDERR--GSTTYAADSEDL-----YHWTVE--GPVLGD------RPHEGPNV 189 (294)
T ss_pred c-----CCCCcEEeEEEEeCCCEEEEEEECCCC--CeEEEEEECCCC-----CEEEeC--CccccC------CCCCCCCe
Confidence 2 245899999987777999999998643 345789999884 899985 455542 12379995
Q ss_pred EEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCcEEecceeccCC---C-CCceeeeeeEEcC
Q 005279 261 AWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLHGVP---N-TGMWECVDFYPVS 319 (704)
Q Consensus 261 vw~~~~g~w~Mv~Gs~~~~~G~~llY~S~Dl~~W~~~~~l~~~~~---~-~gmWECPdlf~l~ 319 (704)
| +.+|+|||+++. ..| +.+|+|+|+.+|++.+.++...+ . ..+++||++++.+
T Consensus 190 -~-k~~g~yym~~~~---~~g-~~~~~S~D~~~W~~~~~~l~~~~~~~~~~~~~~H~~i~~~~ 246 (294)
T cd08984 190 -F-RWKGYYWMIIDE---WKG-LGVYRSKDAENWERQGGILLKPGTRPDDGAKGRHADVVVTG 246 (294)
T ss_pred -e-EECCEEEEEEcC---Cce-EEEEECCChhhcEECCeeeccCCCCccccccccCCcEEEeC
Confidence 4 357899999853 234 66999999999999987775321 1 2378999999775
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.6e-18 Score=181.36 Aligned_cols=160 Identities=23% Similarity=0.276 Sum_probs=122.8
Q ss_pred CCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeeccc-cccc--CCCCCCCcEEeeeEEEecCCcEEEEEe
Q 005279 133 DPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPL-AMVA--DQWYDIMGVWTGSATILPDGKLMMLYT 209 (704)
Q Consensus 133 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~-AL~P--d~~yD~~Gv~SGSavv~~dG~~~~~YT 209 (704)
|| |+++++|+||||||.++.. +.++||||+|+|++||+..+. .|.| +..++..||++++++ ..+|+++|+||
T Consensus 2 nP-~v~~~~G~y~l~y~~~~~~---~~~~ig~A~S~Dg~~~~~~~~~~i~p~~~~~~~~~gv~dP~v~-~~~g~y~m~Yt 76 (268)
T cd08993 2 NP-AVVYDNGEFYLLYRAAGND---GVIRLGLARSRDGLHFEIDPDPPVWPPPEDGFEEGGVEDPRIV-KIDDTYYITYA 76 (268)
T ss_pred cC-eEEEECCEEEEEEEEECCC---CceEEEEEEECCCceEEECCcceEcCCCCCcccccCccCcEEE-EECCEEEEEEE
Confidence 67 7899999999999987644 578999999999999998764 4556 667788999999986 46999999999
Q ss_pred cccC-CceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEe-cCCCeEEEEEeeec---CCeeEEE
Q 005279 210 GSTN-ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWL-TSEGKWRIAIGSRI---NRTGITF 284 (704)
Q Consensus 210 G~~~-~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~-~~~g~w~Mv~Gs~~---~~~G~~l 284 (704)
+... ...+.+++|.|+|. .+|+|.. . ++. | ..||+. +|. +.+|+|+|++.... +..+.+.
T Consensus 77 a~~~~~~~~~i~lA~S~D~-----~~W~~~~-~-~~~-~------~~~d~~-~~p~~~~g~y~m~~r~~~~~~~~~~~I~ 141 (268)
T cd08993 77 ARPNAPNGTRIGLATTKDF-----ITFERLG-T-SLV-P------NNRDGI-LFPEKINGKYVMLHRPFEYGGTSPPDMW 141 (268)
T ss_pred ccCCCCCCcEEEEEEeCCc-----ceEEEec-c-cCC-C------CCCCEE-EeeEEECCEEEEEEccccCCCCCCCcEE
Confidence 9863 34578999999984 8999973 2 111 1 237888 554 35899999996442 2457888
Q ss_pred EEEeCCCCCcEEecceeccCCCCCceeeee
Q 005279 285 VYDTKDFINYELLRGVLHGVPNTGMWECVD 314 (704)
Q Consensus 285 lY~S~Dl~~W~~~~~l~~~~~~~gmWECPd 314 (704)
+++|+|+.+|+..+.++.. ..+.||+-.
T Consensus 142 lA~S~Dl~~W~~~~~~~~~--~~~~wd~~~ 169 (268)
T cd08993 142 LSFSPDLVHWGNHRFVLSP--RPNHWEQLK 169 (268)
T ss_pred EEECCCcCccCCCeEEecC--CCCceeece
Confidence 9999999999987776543 223587643
|
This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.2e-18 Score=178.48 Aligned_cols=192 Identities=15% Similarity=0.195 Sum_probs=139.3
Q ss_pred CCCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccC-CCCCCCcEEeeeEEEecCCcEEE
Q 005279 128 KNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVAD-QWYDIMGVWTGSATILPDGKLMM 206 (704)
Q Consensus 128 ~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd-~~yD~~Gv~SGSavv~~dG~~~~ 206 (704)
.||++||+. ++++|+||||++....+ +....|.+++|+||+||++++.+|.+. ..++..++|.++++. .+|+++|
T Consensus 5 ~g~~~DP~i-~~~~g~yY~~~t~~~~~--~~~~~~~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~wAP~v~~-~~g~yy~ 80 (275)
T cd09004 5 PGWYADPEI-RIFGGTYYIYPTSDGAG--GEQTPFDVFSSKDLVNWTKEGIILDMADVSWANRAAWAPSVIE-RNGKYYF 80 (275)
T ss_pred CCCCCCCCe-EEECCEEEEEEeccCCC--CCeeEEEEEECCCCCCceECcccccccCCcccCCCcCCCeEEE-ECCEEEE
Confidence 478999985 78899999999876543 225789999999999999999998764 345678999999865 6899999
Q ss_pred EEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEE
Q 005279 207 LYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVY 286 (704)
Q Consensus 207 ~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY 286 (704)
+||+. +.+++|+|+|+. ..|++..++|++.+.. ....++||.++. +.+|+|||++++. .++.++-
T Consensus 81 yys~~-----~~i~va~s~~p~----gp~~~~~~~p~~~~~~--~~~~~iDp~vf~-d~dG~~yl~~~~~---~~~~i~~ 145 (275)
T cd09004 81 YFSAN-----GGIGVAVADSPL----GPFKDALGKPLIDKFT--FGAQPIDPDVFI-DDDGQAYLYWGGW---GHCNVAK 145 (275)
T ss_pred EEEcC-----CcEEEEEeCCCC----CCCCCCCCCccccCCc--CCCCccCCCeEE-CCCCCEEEEEcCc---CCEEEEE
Confidence 99986 457899998753 5688755678876432 235689999654 5789999999864 1222334
Q ss_pred EeCCCCCcEEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCCCceEEEEE
Q 005279 287 DTKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIG 354 (704)
Q Consensus 287 ~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~~~~~Y~iG 354 (704)
-++|+.+|+.....+. .....+.|||.+|+.++ +++|+.|........|.+|
T Consensus 146 l~~d~~~~~~~~~~~~-~~~~~~~EgP~i~k~~G---------------~yyl~ys~~~~~~~~Y~~~ 197 (275)
T cd09004 146 LNEDMISFDGERDGSE-ITPKNYFEGPFMFKRNG---------------IYYLMWSEGGWTDPDYHVA 197 (275)
T ss_pred ECCCcccccCcceeee-ccCCCceecceEEEECC---------------EEEEEEECCCCCCCCceEE
Confidence 5788988875443321 12234899999998852 6788888654332334444
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08999 GH43_ABN_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.3e-15 Score=159.89 Aligned_cols=195 Identities=18% Similarity=0.168 Sum_probs=133.4
Q ss_pred CCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCC-CCCCcEEeeeEEEecCCcEEEE
Q 005279 129 NWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQW-YDIMGVWTGSATILPDGKLMML 207 (704)
Q Consensus 129 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~-yD~~Gv~SGSavv~~dG~~~~~ 207 (704)
+.+-||. +++++|+|+||+..... .+|+|++|+||+||+..+.+|.+... .+..++|.++++ ..+|+++|+
T Consensus 6 ~~~~DP~-i~~~~g~yy~~~t~~~~------~~i~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~waP~v~-~~~g~y~~~ 77 (287)
T cd08999 6 GDFPDPS-VIRVDGTYYAYATNGNG------PNVPIATSTDLVNWTYLGDAFPKLPRWWTGGDFWAPDVS-YVNGKYVLY 77 (287)
T ss_pred CCCCCCe-EEEECCEEEEEEeCCCC------CcEEEEECCCCCCcEECCcccCCCCCcccCCCccCceEE-EECCEEEEE
Confidence 4567996 67889999999975432 67999999999999999988876654 455678988875 467999999
Q ss_pred EecccCC-ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCee---EE
Q 005279 208 YTGSTNE-SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTG---IT 283 (704)
Q Consensus 208 YTG~~~~-~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G---~~ 283 (704)
||+.... ..+.+++|+|.|.. ..|++.. .+++..+.+ ....+||.+++ +++|+|||++++.....| .+
T Consensus 78 y~~~~~~~~~~~i~~a~s~~p~----g~~~~~~-~~~~~~~~~--~~~~~Dp~v~~-d~dG~~Yl~~~~~~~~~~~~~~i 149 (287)
T cd08999 78 YSARDKGSGGQCIGVATADSPL----GPFTDHG-KPPLCCPEG--EGGAIDPSFFT-DTDGKRYLVWKSDGNSIGKPTPI 149 (287)
T ss_pred EEeecCCCCCEEEEEEECCCCC----CCCccCC-cceEecCCC--CCCccCCCeEE-CCCCCEEEEEeccCCCCCCCceE
Confidence 9998652 34667889987752 5798864 333332222 24679999655 568999999987532211 12
Q ss_pred EEE-EeCCCCCcEEecc-eeccCC--CCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCCCce--EEEEE
Q 005279 284 FVY-DTKDFINYELLRG-VLHGVP--NTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHD--YYAIG 354 (704)
Q Consensus 284 llY-~S~Dl~~W~~~~~-l~~~~~--~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~~~~--~Y~iG 354 (704)
.+. .|+|+.+|..... ++.... ...++|||.+|+.++ +++|.+|....... .|.+|
T Consensus 150 ~~~~ls~d~~~~~~~~~~i~~~~~~~~~~~~EgP~i~k~~g---------------~yyl~~S~~~~~~~~~~y~i~ 211 (287)
T cd08999 150 YLQELSADGLTLTGEPVRLLRNDEDWEGPLVEAPYLVKRGG---------------YYYLFYSAGGCCSGASTYAVG 211 (287)
T ss_pred EEEEeCCCCccccCCcEeeecccccccCCceEeeEEEEECC---------------EEEEEEEcCCccCCCCCEEEE
Confidence 222 4689888864332 222111 234899999999852 78888887543222 45554
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.4e-14 Score=151.89 Aligned_cols=195 Identities=14% Similarity=0.163 Sum_probs=138.8
Q ss_pred CCCcceEECCEEEEEEeeCCCCCC---CCCcEEEEEEeCCCcceeecccccccCC--CCCCCcEEeeeEEEecCCcEEEE
Q 005279 133 DPNGPVFYKGWYHLFYQYNPNGAI---WGDIVWGHAVSKDLIHWYHLPLAMVADQ--WYDIMGVWTGSATILPDGKLMML 207 (704)
Q Consensus 133 DPNG~~y~~G~YHLFYQ~nP~~~~---wG~~~WGHAvS~DLvhW~~lp~AL~Pd~--~yD~~Gv~SGSavv~~dG~~~~~ 207 (704)
||. +++++|+||||.......+. +....|..+.|+||+||+..+.+|.+.. .++..++|.++++ ..+|+++||
T Consensus 2 DP~-~~~~~~~yy~~~t~~~~~~~~~~~~~~~~~v~~S~Dl~~W~~~g~~l~~~~~~~~~~~~~wAP~i~-~~~g~yy~y 79 (274)
T cd08990 2 DPA-AHVFNGRVYIYTSHDEAGGGGDDFCMNDYHVFSSPDLVNWTDHGVILSVTDFPAWAKGQAWAPDVV-EKNGKYYLY 79 (274)
T ss_pred CCC-cEEECCEEEEEeCCCCCCCCCCccccceEEEEECCCCCCcEECcccccCCCCCccccCCcCcCeEE-EECCEEEEE
Confidence 885 67789999999987654432 3345689999999999999999887543 3667899999986 479999999
Q ss_pred EecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEE
Q 005279 208 YTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYD 287 (704)
Q Consensus 208 YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~ 287 (704)
||+......+.+++|+|+|.. ..|++....|++...+ ......||.+++ .++|++||+.++. .++.+.-.
T Consensus 80 y~~~~~~~~~~igva~s~~p~----Gpw~~~~~~~~~~~~~--~~~~~iDp~vf~-d~dG~~yl~~~~~---~~~~~~~l 149 (274)
T cd08990 80 FPARDKDGGFAIGVAVSDSPA----GPFKDAGGPILITTPS--GGWYSIDPAVFI-DDDGQAYLYWGGG---LGLRVAKL 149 (274)
T ss_pred EEeecCCCceEEEEEEeCCCC----CCCCCCCCccccccCC--CCCCccCCcEEE-CCCCCEEEEECCc---CCEEEEEe
Confidence 999754345678899997752 5798865555554221 234678999654 6689999999864 24444556
Q ss_pred eCCCCCcEEecceecc-----CCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCCCceEEEEE
Q 005279 288 TKDFINYELLRGVLHG-----VPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIG 354 (704)
Q Consensus 288 S~Dl~~W~~~~~l~~~-----~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~~~~~Y~iG 354 (704)
|+|+.+|+.....+.. ....+..|+|.+|+..+ +++|..|.+......|++.
T Consensus 150 ~~d~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~G---------------~YYl~yS~~~~~~~~~a~s 206 (274)
T cd08990 150 KPDMLSLKGEPVEIVITDGAGDELRRFFEAPWVHKRNG---------------TYYLSYSTGDPEEIAYATS 206 (274)
T ss_pred CccccccCCCcEEEEeccccCCCCCCcccceeEEEECC---------------EEEEEEECCCCcEEEEEEc
Confidence 8899999754443321 11234789999998852 7888888765444445543
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of |
| >cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.3e-13 Score=142.32 Aligned_cols=191 Identities=21% Similarity=0.204 Sum_probs=128.6
Q ss_pred CCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccc----cCCCCCCCcEEeeeEEEecCCcEEEEE
Q 005279 133 DPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMV----ADQWYDIMGVWTGSATILPDGKLMMLY 208 (704)
Q Consensus 133 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~----Pd~~yD~~Gv~SGSavv~~dG~~~~~Y 208 (704)
||. +++++|+|||||..... ....++.++|+||++|+..+.++. +....+..++|.++++. .+|+++|+|
T Consensus 2 DP~-v~~~~~~yyl~~t~~~~----~~~~i~i~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~y 75 (271)
T cd08978 2 DPY-ILRYNGKYYLYGSTDDA----AGPGVQVWSSKDLVNWRYEGAVFVAWRGRGEAKDSGGLWAPEVIY-YEGKYYLYY 75 (271)
T ss_pred CCc-EEEECCEEEEEEecCCc----CCCcEEEEECCccCCcEECCcccccccccCCcccCCceeCCeEEE-ECCEEEEEE
Confidence 885 68889999999987643 235689999999999999998875 44456678899999865 679999999
Q ss_pred ecccC-CceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecC--CeeEEEE
Q 005279 209 TGSTN-ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRIN--RTGITFV 285 (704)
Q Consensus 209 TG~~~-~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~--~~G~~ll 285 (704)
|+... ...+.+++|+|+|. ..|.+... ...+. ......+||.+++ +++|++||+.++... ..+.+.+
T Consensus 76 ~~~~~~~~~~~i~~a~s~d~-----~g~~~~~~---~~~~~-~~~~~~iDp~vf~-d~dg~~yl~~~~~~~~~~~~~i~~ 145 (271)
T cd08978 76 SVSDFDYNGSGIGVATSEDP-----TGPFEDKV---IRPPT-SNNGNSIDPTVFK-DDDGKYYLYYGSGDPGAGFGGIYI 145 (271)
T ss_pred EcccCCCCcccEEEEECCCC-----CCCccccc---cCcCc-cCCCCccCcceEE-cCCCCEEEEEecccCCCCCCcEEE
Confidence 99753 23467889999875 45555321 11111 1234678999655 566999999987642 2455677
Q ss_pred EEeCCCCCcEEecce-e-ccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCCCceEEEEE
Q 005279 286 YDTKDFINYELLRGV-L-HGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIG 354 (704)
Q Consensus 286 Y~S~Dl~~W~~~~~l-~-~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~~~~~Y~iG 354 (704)
.++++...|...... . .......+.|||.+|+..+ +++|..|........|.++
T Consensus 146 ~~l~~~~~~~~~~~~~~~~~~~~~~~~EgP~~~k~~g---------------~yyl~ys~~~~~~~~y~~~ 201 (271)
T cd08978 146 SELTDDLTKPTGPPVLSASSGNNNAVTEGPTIFKKNG---------------YYYLTYSANGTGDYGYNIG 201 (271)
T ss_pred EEECcccccccCCceeeeeeccCCCceEccEEEEECC---------------EEEEEEEeCCCCCCCceEE
Confidence 777664443322221 1 1112234899999998752 7888887654422335444
|
This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma |
| >cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.53 E-value=5.9e-13 Score=140.77 Aligned_cols=188 Identities=15% Similarity=0.124 Sum_probs=127.2
Q ss_pred CCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCC-CCCCCcEEeeeEEEecCCcEEEEEecc
Q 005279 133 DPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQ-WYDIMGVWTGSATILPDGKLMMLYTGS 211 (704)
Q Consensus 133 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~-~yD~~Gv~SGSavv~~dG~~~~~YTG~ 211 (704)
||. +++++|+|+||+..... ...+..++|+||+||+..+.++.+.. .+...++|.++++. .+|+++|+||+.
T Consensus 2 DP~-v~~~~g~yyl~~t~~~~-----~~~i~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~ys~~ 74 (294)
T cd08991 2 DPF-VLRYNGKYYAYGTGGAD-----GRGFAVYSSPDLVDWKLHGGALLALDDDWGRRGFWAPEVYY-YNGKFYMYYSAN 74 (294)
T ss_pred CCe-EEEECCEEEEEEeCCCC-----CCeeEEEECCCCCCceECCccccCCCCCccCCcEEccEEEE-ECCEEEEEEEec
Confidence 886 68889999999876543 23578999999999999998887655 36678999999864 689999999997
Q ss_pred cCC-ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCC---eeEEEEEE
Q 005279 212 TNE-SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINR---TGITFVYD 287 (704)
Q Consensus 212 ~~~-~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~---~G~~llY~ 287 (704)
... ..+.+++|+|+|+. ..|++....++ .. + ...+||.+++ ..+|+|||+.+..... .++.+.--
T Consensus 75 ~~~~~~~~i~~a~s~~p~----gp~~~~~~~~~-~~--~---~~~iD~~vf~-d~dG~~yl~~~~~~~~~~~~~i~~~~l 143 (294)
T cd08991 75 DRDEKTEHIGVAVSDSPL----GPFRDIKKPPI-DF--E---PKSIDAHPFI-DDDGKPYLYYSRNNYGNRVSDIYGTEL 143 (294)
T ss_pred cCCCCcceEEEEEeCCCC----CCCCcCCCCcc-cC--C---CcccCCceEE-CCCCCEEEEEEecCCCCcccceEEEEE
Confidence 543 45778999998752 56877532222 21 1 3467999655 5679999999865321 24555556
Q ss_pred eCCCCCcEEecc--eec-c---------------CCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCCCce
Q 005279 288 TKDFINYELLRG--VLH-G---------------VPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHD 349 (704)
Q Consensus 288 S~Dl~~W~~~~~--l~~-~---------------~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~~~~ 349 (704)
+.|+.+|.-... ... . .....+-|+|.+++.++ +++|..|.......
T Consensus 144 ~~d~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~k~~g---------------~yyl~ys~~~~~~~ 208 (294)
T cd08991 144 VDDKLSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVLKHNG---------------RYYLTYSANHYENE 208 (294)
T ss_pred ccceeeeccceeeccccccccccccccccccccccccCceeeCcEEEEECC---------------EEEEEEECCCCCCC
Confidence 788877652111 000 0 01123789999998852 68888876443333
Q ss_pred EEEE
Q 005279 350 YYAI 353 (704)
Q Consensus 350 ~Y~i 353 (704)
.|.+
T Consensus 209 ~y~~ 212 (294)
T cd08991 209 DYGV 212 (294)
T ss_pred CceE
Confidence 3433
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08998 GH43_ABN_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.7e-12 Score=134.64 Aligned_cols=129 Identities=23% Similarity=0.259 Sum_probs=98.6
Q ss_pred ccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCC-------CCCCCcEEeeeEEEecCCc
Q 005279 131 MNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQ-------WYDIMGVWTGSATILPDGK 203 (704)
Q Consensus 131 mNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~-------~yD~~Gv~SGSavv~~dG~ 203 (704)
+.||. +++++|+||||+... ++++++|+||+||++.+.++.+.. +.+..++|.++++. .+|+
T Consensus 1 ~~DP~-v~~~~~~yyl~~t~~---------~i~i~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~wAP~v~~-~~g~ 69 (288)
T cd08998 1 VHDPS-IIKEGDTYYLFSTGN---------GIAIAKSKDLGNWTYVGSVFPTGPPWWSSIDPGGSGNLWAPDVIY-LNGK 69 (288)
T ss_pred CCCCe-EEEECCEEEEEEcCC---------CeEEEECCCCCCcEECCccccCCCccccccccCCCCCccCCeEEE-ECCE
Confidence 46996 789999999999864 589999999999999998886543 23457899999864 6999
Q ss_pred EEEEEecccCC-ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeee
Q 005279 204 LMMLYTGSTNE-SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSR 276 (704)
Q Consensus 204 ~~~~YTG~~~~-~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~ 276 (704)
++|+||+.... ..+.+++|+|+|. ....|++. +||+...++......+||.+++ .++|++||+.++.
T Consensus 70 yyl~ys~~~~~~~~~~i~va~s~~~---~~gpw~~~--~~v~~~~~~~~~~~~iDp~vf~-d~dG~~Yl~~~~~ 137 (288)
T cd08998 70 YYLYYSVSTFGSNRSAIGLATSDTL---PDGPWTDH--GIVIESGPGRDDPNAIDPNVFY-DEDGKLWLSFGSF 137 (288)
T ss_pred EEEEEEEEeCCCCceEEEEEEeCCC---CCCCCEEc--ceeeecCCCCCCcccccCCEEE-cCCCCEEEEeeec
Confidence 99999987543 3466789999874 12579874 5888754332334678999655 5689999999864
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.4e-12 Score=141.63 Aligned_cols=170 Identities=22% Similarity=0.261 Sum_probs=120.9
Q ss_pred cccceeecCCCCc-cCCCcceEECCEEEEEEeeCCC-----------CC--CCCCcEEEEEEeCCCcceeecccccccC-
Q 005279 119 RTAFHFQPQKNWM-NDPNGPVFYKGWYHLFYQYNPN-----------GA--IWGDIVWGHAVSKDLIHWYHLPLAMVAD- 183 (704)
Q Consensus 119 Rp~~Hf~P~~gWm-NDPNG~~y~~G~YHLFYQ~nP~-----------~~--~wG~~~WGHAvS~DLvhW~~lp~AL~Pd- 183 (704)
.|..=+.+..+.. .||+.+++.+|.|||||++... .+ .|.....+||+|+||+||++.+.+|.+.
T Consensus 24 ~p~~~~~~e~~i~r~dP~~Vi~~~g~Y~mwYs~~~~~~~~~~~~~~~~~~~~w~~y~I~~A~S~Dgv~W~~~g~~L~~~~ 103 (349)
T cd08992 24 YPKGGLGYEEGVHRRDPSSVIKVDGLYHVWYTKSEGETDGFGTGDPEAKVFPWDKCEIWHATSKDGWTWKEEGPAIGRGE 103 (349)
T ss_pred CcccccccccCeecCCCceEEEECCEEEEEEEecCCcccccccCCccccccCCCceEEEEEECCCCCCceECCccccCCC
Confidence 4444455555544 5998889999999999997532 11 1446778999999999999999888654
Q ss_pred -CCCCCCcEEeeeEEEecCCcEEEEEecccCC----ceeeEEEEEeCCCCCCccceeEeeCCCceecCC-CC--------
Q 005279 184 -QWYDIMGVWTGSATILPDGKLMMLYTGSTNE----SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPP-PG-------- 249 (704)
Q Consensus 184 -~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~----~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p-~g-------- 249 (704)
..||..++|..+++ ..+|+++|+|++.... ..+.+++|++.++. ..|++. .+||+.+- ++
T Consensus 104 ~g~Wd~~~vwaP~Vi-~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~----GpWtr~-d~Pil~p~~dg~w~~d~~~ 177 (349)
T cd08992 104 KGAYDDRSVFTPEVL-EHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPY----GPWTKS-DEPILSPSNDGIWKGDEDN 177 (349)
T ss_pred CCCccccceECcEEE-EECCEEEEEEEecccccCCCCcceEEEEEECCcc----cccccC-CCcEecCCcCCceeeccCc
Confidence 35889999999986 6799999999975421 23568999998752 359986 68998752 11
Q ss_pred ---------CCCcCccCCeeEEecCCCeEEEEEeeecC--------CeeEEEEEEeCCCC-CcEE
Q 005279 250 ---------IGAKDFRDPTTAWLTSEGKWRIAIGSRIN--------RTGITFVYDTKDFI-NYEL 296 (704)
Q Consensus 250 ---------~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~--------~~G~~llY~S~Dl~-~W~~ 296 (704)
++...+.||.|+. .+|+|||++.+... ..-++.|..|+++. -|+.
T Consensus 178 ~~~~~~~g~wD~~~v~~P~v~~--~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~GPf~r 240 (349)
T cd08992 178 RFLVKKKGSFDSHKVHDPCLFP--FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEGPYVK 240 (349)
T ss_pred eeEeccCCCcccCceECCEEEE--ECCEEEEEEEccccCcccccCCCCceEEEEEECCCCCCCEe
Confidence 3345578999653 58999999966431 11256677888764 4654
|
This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08984 GH43_5 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.4e-11 Score=130.93 Aligned_cols=169 Identities=18% Similarity=0.215 Sum_probs=117.5
Q ss_pred ccCCCcceEE--CCEEEEEEee-C---CCC-CCCC-CcEEEEEEeCC-CcceeecccccccCCCCCCCcEEeeeEEEecC
Q 005279 131 MNDPNGPVFY--KGWYHLFYQY-N---PNG-AIWG-DIVWGHAVSKD-LIHWYHLPLAMVADQWYDIMGVWTGSATILPD 201 (704)
Q Consensus 131 mNDPNG~~y~--~G~YHLFYQ~-n---P~~-~~wG-~~~WGHAvS~D-LvhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~d 201 (704)
.-||. +++. +|+|||||-. . |.. ..|. ...+|+|+|+| |+||+.++.++.++..+....+|.+.++. .+
T Consensus 11 ~~DP~-i~~~~~~~~~~~~yT~~~~~~~~~~~~w~~~~~i~~a~S~D~l~~W~~~g~~~~~~~~~~~~~~WAP~v~~-~~ 88 (294)
T cd08984 11 AADPT-IIYNRETKEWWMFYTNRRANVPTPGVAWVHGTDIGVASSKDGGATWTYRGTADGLEFECGRNTFWAPEVVW-HG 88 (294)
T ss_pred CCCCE-EEEeCCCCEEEEEEccccCcCCCCCcccCcCceEEEEEeCCCCCCCEEeeeeccCCCCCcccceeCceEEE-EC
Confidence 67996 7887 7899999942 1 111 2343 35799999999 99999998777664455667799999864 68
Q ss_pred CcEEEEEecccC-----CceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeee
Q 005279 202 GKLMMLYTGSTN-----ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSR 276 (704)
Q Consensus 202 G~~~~~YTG~~~-----~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~ 276 (704)
|+++||||.... ......++|+|+| +.+|++.+ ++..+ .....||.++. ..+|+|+|++...
T Consensus 89 G~y~myys~~~~~~~~~~~~~~i~~a~S~D-----l~~w~~~~--~~~~~-----~~~~iD~~vf~-~~dg~~yl~y~~~ 155 (294)
T cd08984 89 GVYHMYVTYIPGVPPDWGGPRRIVHYTSPN-----LWDWTFVG--RVDLD-----SDRVIDACVFK-LPDGRWRMWYKDE 155 (294)
T ss_pred CEEEEEEEecCCCCcccCCCcEEEEEECCC-----cCcceECC--ccccC-----CCCcEEeEEEE-eCCCEEEEEEECC
Confidence 999999997532 1235678899987 37899753 33211 12457999653 4679999999643
Q ss_pred cCCeeEEEEEEeCCCCCcEEecceeccCCCCCceeeeeeEEcC
Q 005279 277 INRTGITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVS 319 (704)
Q Consensus 277 ~~~~G~~llY~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~ 319 (704)
.. ...+.+..|+|+.+|+..+.++. . ..-|+|.+|+..
T Consensus 156 ~~-~~~~~~a~s~D~~~w~~~~~~i~---~-~~~EgP~v~k~~ 193 (294)
T cd08984 156 RR-GSTTYAADSEDLYHWTVEGPVLG---D-RPHEGPNVFRWK 193 (294)
T ss_pred CC-CeEEEEEECCCCCEEEeCCcccc---C-CCCCCCCeeEEC
Confidence 22 22445678999999998665442 1 134888888764
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >PF11837 DUF3357: Domain of unknown function (DUF3357); InterPro: IPR021792 This entry represents the N-terminal domain of beta-fructofuranosidase, whcih is involved in the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides | Back alignment and domain information |
|---|
Probab=99.36 E-value=6e-14 Score=128.08 Aligned_cols=94 Identities=39% Similarity=0.595 Sum_probs=3.6
Q ss_pred CCCCCCCCCCCC-------CCCccchhhHHHHHHHHHHHHHHHH-hhCCCCCCcccccCCCCCccccccCCCCcCCCCCC
Q 005279 6 VSYNPLPDGERP-------RPTRRRSIVLVLSGLLVVGFLVALL-SDNGSIAPANVIDNDNNNVNDNAKNGLNDVSSSSK 77 (704)
Q Consensus 6 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (704)
.+|+|||+++++ +||+.|.+++|++++++|++||+++ ...+. .+. . ..........
T Consensus 5 ~sY~PLP~~~~~~~~~~~~~rR~~k~~~~i~~s~~~ll~lval~~~~~~~-~~~-------~--------~~~~~~~~~~ 68 (106)
T PF11837_consen 5 YSYTPLPDSSESAPGPGGRRRRPLKCLAAIFSSLLFLLSLVALIVINNGQ-SPD-------G--------SSVSSSSPPP 68 (106)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccCCCCCCCcccCCCCcCcCCcchhHHHHHHHHHHHHHHHHHHHhhccC-CCC-------c--------cccccCCCCC
Confidence 469999977532 2445589999999999999999998 22221 000 0 0001112233
Q ss_pred CCcccccCCCCCccccccccccccCCCCCCCCCCCccc
Q 005279 78 EPERLRPFTSASSAGVSEKSNRRFGSRTASYPWTNNML 115 (704)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (704)
.+++..|.+||+++|||||+++...+...+|||+|+||
T Consensus 69 ~~~~~~~~SRGv~~GVSEKS~~~~~~~~~~FpWtNaML 106 (106)
T PF11837_consen 69 SPETATPVSRGVSEGVSEKSNGAGSGAGNSFPWTNAML 106 (106)
T ss_dssp ----------------------------------HHHH
T ss_pred CCccccCCCCCcccCcccccccCccCCCCCCCCccccC
Confidence 44555678999999999999988666677999999997
|
; GO: 0004564 beta-fructofuranosidase activity, 0004575 sucrose alpha-glucosidase activity; PDB: 3UGG_A 3UGH_B 3UGF_B. |
| >cd08985 GH43_6 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.7e-10 Score=119.71 Aligned_cols=197 Identities=18% Similarity=0.111 Sum_probs=130.2
Q ss_pred CCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCC----CCCCCcEEeeeEEEec-CCcEEEE
Q 005279 133 DPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQ----WYDIMGVWTGSATILP-DGKLMML 207 (704)
Q Consensus 133 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~----~yD~~Gv~SGSavv~~-dG~~~~~ 207 (704)
|| ++++++|+|++|--....+.. ....|-..+|+||+||+..+.+|.+.. .....++|.++++..+ +|+++|+
T Consensus 5 ~~-~i~~~~~~yY~ygs~~~~~~~-~~~gi~~~sS~DLvnW~~~g~vl~~~~~~~~~~~~~~~waP~v~y~~~~g~Y~m~ 82 (265)
T cd08985 5 GG-GILKVGGTYYWYGENKGGGDT-AFGGVSCYSSTDLVNWTFEGLALTPEEDSADLGPGRIIERPKVIYNAKTGKYVMW 82 (265)
T ss_pred cC-ceEEECCEEEEEEEecCCCCc-ccccEEEEECCCCccceECceeccccccccccccCcEEECCeEEEeCCCCEEEEE
Confidence 45 578899999999776543211 135578889999999999999997754 3445679999997643 6999999
Q ss_pred EecccC-CceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEE
Q 005279 208 YTGSTN-ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVY 286 (704)
Q Consensus 208 YTG~~~-~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY 286 (704)
|++... .....+++|+|++.. ..|+... .+. +.+ ...|||.+++ ++||++||+.++..+. .+.+.
T Consensus 83 ~~~~~~~~~~~~igvA~Sd~p~----Gpf~~~~-~~~---~~~---~~~~Dp~vf~-DdDG~~Yl~~~~~~~~--~i~i~ 148 (265)
T cd08985 83 MHIDSSDYSDARVGVATSDTPT----GPYTYLG-SFR---PLG---YQSRDFGLFV-DDDGTAYLLYSDRDNS--DLYIY 148 (265)
T ss_pred EEeCCCCCcceeEEEEEeCCCC----CCCEECC-ccC---CCC---CCccCCceEE-cCCCCEEEEEecCCCC--ceEEE
Confidence 998642 234578899997653 5677642 221 222 3579999655 6789999999976422 23344
Q ss_pred E-eCCCCCcEEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCC---CCceEEEEEEeeCCcee
Q 005279 287 D-TKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDD---DRHDYYAIGTYHEKNVT 362 (704)
Q Consensus 287 ~-S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~---~~~~~Y~iG~~d~~~~~ 362 (704)
+ ++|+..+.- .... .......|||.+|+.++ +++|..|... .....|++.+ + -.+.
T Consensus 149 ~L~~d~~~~~~--~~~~-~~~~~~~EaP~i~K~~g---------------~YYL~~S~~t~~~~~~~~y~~s~-s-~~GP 208 (265)
T cd08985 149 RLTDDYLSVTG--EVTT-VFVGAGREAPAIFKRNG---------------KYYLLTSGLTGWNPNDARYATAT-S-ILGP 208 (265)
T ss_pred EeCCCcccccc--eEEE-ccCCCccccceEEEECC---------------EEEEEEccCCCccCCceEEEEec-C-CCCC
Confidence 4 367777653 2221 11224789999999863 7888887642 1345677664 1 1245
Q ss_pred eec
Q 005279 363 WVP 365 (704)
Q Consensus 363 f~p 365 (704)
|+.
T Consensus 209 ~~~ 211 (265)
T cd08985 209 WTD 211 (265)
T ss_pred ccc
Confidence 653
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J | Back alignment and domain information |
|---|
Probab=99.29 E-value=4.7e-11 Score=123.83 Aligned_cols=158 Identities=23% Similarity=0.301 Sum_probs=109.0
Q ss_pred CCCCCccccccccccee--ecC----CCCccCCCcceEEC-CEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeeccccc
Q 005279 108 YPWTNNMLSWQRTAFHF--QPQ----KNWMNDPNGPVFYK-GWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAM 180 (704)
Q Consensus 108 ~~~~~~~~~w~Rp~~Hf--~P~----~gWmNDPNG~~y~~-G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL 180 (704)
+..+..+..|.|+.--+ .|. .+.+-||+ +++.+ |+|||||..+... ......+++|+|+|++||+..+..+
T Consensus 37 ~a~S~D~~~w~~~~~~l~~~~~~~~~~~~~~~p~-v~~~~dg~~~~~Yt~~~~~-~~~~~~i~~A~S~D~~~w~~~~~~~ 114 (276)
T cd08979 37 AASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPS-VVRDPDGTYRMFYTGYDRP-KGAVQRIGLATSKDLIHWTKHGPNP 114 (276)
T ss_pred EEEcCCCCccEECCcCccCCCCCchhcCCeEcce-EEEcCCCeEEEEEecccCC-CCCcceEEEEECCCCCceEECCCCc
Confidence 44556667777665433 222 34466786 56667 9999999976532 2346789999999999999987654
Q ss_pred c-------cCCCCCCCcEEeeeEEEecC-CcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCC
Q 005279 181 V-------ADQWYDIMGVWTGSATILPD-GKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGA 252 (704)
Q Consensus 181 ~-------Pd~~yD~~Gv~SGSavv~~d-G~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~ 252 (704)
. +...++...+.++.++.+++ |+++|+|++........+.+|.|.|. .+|++....+ ....+...
T Consensus 115 ~~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~~~~i~~a~S~D~-----~~W~~~~~~~--~~~~~~~~ 187 (276)
T cd08979 115 VPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDADERGAIGLATSPDL-----IHWTPVPPPP--GPRTGYDD 187 (276)
T ss_pred ceeeeecCCCCCcccccccccEEEEECCCCEEEEEEEeEccCCCcEEEEEECCCC-----CcceECCCCC--CCCCcccC
Confidence 2 22234455778898876544 89999999876544567889999884 8999864333 22222334
Q ss_pred cCccCCeeEEecCCCeEEEEEeee
Q 005279 253 KDFRDPTTAWLTSEGKWRIAIGSR 276 (704)
Q Consensus 253 ~~fRDP~Vvw~~~~g~w~Mv~Gs~ 276 (704)
..+.+|.++. .+|+|+|++.+.
T Consensus 188 ~~~e~P~~~~--~~g~~~l~~~~~ 209 (276)
T cd08979 188 GQLEVPQVVK--IDGRWYLLYSGR 209 (276)
T ss_pred CcCccceEEE--ECCEEEEEEEec
Confidence 5678999543 569999999876
|
This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta |
| >PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety | Back alignment and domain information |
|---|
Probab=99.23 E-value=8.6e-11 Score=126.52 Aligned_cols=159 Identities=23% Similarity=0.273 Sum_probs=109.8
Q ss_pred cceEECCE--EEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecc-cccccCCCCCCCcEEeeeEEEecCCcEEEEEeccc
Q 005279 136 GPVFYKGW--YHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLP-LAMVADQWYDIMGVWTGSATILPDGKLMMLYTGST 212 (704)
Q Consensus 136 G~~y~~G~--YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp-~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~ 212 (704)
|.+.++|. |||+|...-. ..+..+.|.|.|+|.+||+..+ +.|.|+..|+..||....++. .+|+++|+||+..
T Consensus 36 gai~~~~~~R~~l~yr~~~~--~~~~~~iglA~S~DGi~f~~~~~pil~P~~~~e~~GvEDPRVt~-i~d~yymtYta~~ 112 (312)
T PF04041_consen 36 GAIVFDGGLRVYLLYRAYGS--DIGSSRIGLARSDDGIHFERDPEPILYPDTDYEEWGVEDPRVTK-IDDTYYMTYTAYS 112 (312)
T ss_dssp EEEEETTE--EEEEEEEEES--SSSEEEEEEEEESSSSS-EE-SS-SBEE-SSTTHTEEEEEEEEE-ETTEEEEEEEEEE
T ss_pred cEEEECCeeEEEEEEEeECC--CCceeEEEEEEccCCcCceECCCCEEccCCCCcccCccceeEEE-ECCEEEEEEEEec
Confidence 56656666 8888865432 2233489999999999999876 579999999999999999975 6899999999987
Q ss_pred CCceeeEEEEEeCCCCCCccceeEeeCCCceecCCC---CCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeC
Q 005279 213 NESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPP---GIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTK 289 (704)
Q Consensus 213 ~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~---g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~S~ 289 (704)
... ..+++|.|+|. .+|+|+. +++.+.. ......-+|-..+-.+.+|+|+|+.+ .+.+.+-.|+
T Consensus 113 ~~~-~~~~la~s~D~-----~~~~r~g--~~~~~~~~~~~~~~~~~kd~~lfp~ki~Gky~m~~r-----~~~i~la~S~ 179 (312)
T PF04041_consen 113 GKG-PRIGLATSKDF-----KHWERHG--KIFPPFNGNEDYRDFWSKDGALFPEKINGKYAMLHR-----DPSIWLAYSP 179 (312)
T ss_dssp SSS-EEEEEEEESSS-----SSEEEEE--CTTTTTCTS-EEEEEEEECCEEEESEETTEEEEEEE-----SSSBEEEEES
T ss_pred CCC-cccceEEccch-----HhhEEec--cccCcccccccccccccCceEEEEEEECCEEEEEEC-----CCCEEEEecC
Confidence 654 56899999994 9999985 2222111 01111225544222246899999998 3457788899
Q ss_pred CCCCcEEecc-eeccCCCCCceee
Q 005279 290 DFINYELLRG-VLHGVPNTGMWEC 312 (704)
Q Consensus 290 Dl~~W~~~~~-l~~~~~~~gmWEC 312 (704)
|+++|+.... ++. +..++||+
T Consensus 180 Dl~~W~~~~~~~~~--~~~~~~d~ 201 (312)
T PF04041_consen 180 DLIHWGNHREPLLS--PRPGWWDS 201 (312)
T ss_dssp SSSSEEEEBETSB----STTSSCS
T ss_pred Cccccccccccccc--CCCCcChh
Confidence 9999997655 432 33457887
|
On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B. |
| >PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.23 E-value=1e-09 Score=114.94 Aligned_cols=185 Identities=21% Similarity=0.215 Sum_probs=125.5
Q ss_pred CCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCC--CCcE-EeeeEEEecCCcEE
Q 005279 129 NWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYD--IMGV-WTGSATILPDGKLM 205 (704)
Q Consensus 129 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD--~~Gv-~SGSavv~~dG~~~ 205 (704)
+..-||. +++++|.|+||+...+.. ..+..++|+||+||+..+.++.+....+ ..+. |.+.++ ..+|+++
T Consensus 8 ~~~~DP~-i~~~~~~yY~~~t~~~~~-----~~i~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~WAP~i~-~~~g~yy 80 (286)
T PF04616_consen 8 GDYADPS-IVRFGDGYYLYGTTDPEG-----PGIPVWSSKDLVNWTDAGNVLPPPPDWDWANNGNIWAPEIH-YINGKYY 80 (286)
T ss_dssp SSECSEE-EEEETTEEEEEEEEBTCE-----SBEEEEEESSSSSEEEEEECESSTTTTSTTTSETTEEEEEE-EETTEEE
T ss_pred CCCCCCE-EEEECCEEEEEEEcCCCC-----CeEEEEECCCCcccccceeeecccccccccccccccCCeEE-EcCCeEE
Confidence 5667996 788899999998776543 4578999999999999998776654322 3333 999986 5799999
Q ss_pred EEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCC--eeEE
Q 005279 206 MLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINR--TGIT 283 (704)
Q Consensus 206 ~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~--~G~~ 283 (704)
|+|+.......+.+.+|++.+.. ..|+... .+.+. .....||.+++ .++|++||+.+..... .+.+
T Consensus 81 ~y~~~~~~~~~~~~~va~a~~~~----Gp~~~~~-~~~~~------~~~~iD~~vf~-d~dG~~Yl~~~~~~~~~~~~~i 148 (286)
T PF04616_consen 81 MYYSDSGGDAGSGIGVATADSPD----GPWTDPG-KIPIP------GGNSIDPSVFV-DDDGKYYLYYGSWDNGDPGGGI 148 (286)
T ss_dssp EEEEEESTSTTEEEEEEEESSTT----S-EEEEE-EEEEE------SSSSSSEEEEE-ETTSEEEEEEEESTTTSSEEEE
T ss_pred EEEEccCCCCCcceeEEEeCCcc----ccccccc-ceeec------cccccCceEEE-ecCCCcEEeCcccCCCccceeE
Confidence 99993333334668899998753 6888753 22222 23457999655 5669999999986432 2334
Q ss_pred EEEE-eCCCCCcEEec-cee-ccC--CCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCCC
Q 005279 284 FVYD-TKDFINYELLR-GVL-HGV--PNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDR 347 (704)
Q Consensus 284 llY~-S~Dl~~W~~~~-~l~-~~~--~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~~ 347 (704)
.+.+ ++|...+.... ... ... ...+.-|+|-+|+.++ +++|..|.....
T Consensus 149 ~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~g---------------~yYl~~s~~~~~ 202 (286)
T PF04616_consen 149 YIAELDPDGTSLTGEPVVVIFPGDEGWDGGVVEGPFVFKHGG---------------KYYLFYSAGGTG 202 (286)
T ss_dssp EEEEEETTTSSEEEEECEEEEEESGSSTTTBEEEEEEEEETT---------------EEEEEEEESGSS
T ss_pred EeecccCccccccCcccccccccccccCCccccceEEEEcCC---------------CEEEEEeccCCC
Confidence 4444 56777766544 222 221 1335899999999863 678888865433
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B .... |
| >PF08244 Glyco_hydro_32C: Glycosyl hydrolases family 32 C terminal; InterPro: IPR013189 This domain corresponds to the C-terminal domain of glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.9e-11 Score=104.85 Aligned_cols=78 Identities=27% Similarity=0.394 Sum_probs=55.8
Q ss_pred cceEEEEEEcCCCCceeeEEEEEeeCCCCceeEeEEecCCCCCccccccccccceeeEeecCcchhhhhccccccccccc
Q 005279 514 GPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSSTGRREILNESIGEHISCYCPNEHMYMLALSIESSQSIWN 593 (704)
Q Consensus 514 g~fGl~v~a~~~~~e~t~v~f~~~~~~dg~~~~~~~~Dr~rSs~~~~~~~~~G~~~~~~~Pv~~~~~~~l~~e~~~~~~~ 593 (704)
++|||.|+++.+.+|.|.|+|+..+ + .+++||++|+. ......++.+. ...|+. ..++.
T Consensus 9 ~~~g~~l~~s~~~~e~~~i~~d~~~---~----~l~vDR~~s~~-~~~~~~~~~~~-~~~~~~------~~~~~------ 67 (86)
T PF08244_consen 9 DSFGLRLRASNDGGEETSIGYDPAN---G----TLTVDRTNSGI-NDFSEEFGTFV-RSAPLD------LGDKI------ 67 (86)
T ss_dssp CEEEEEEEEETTSSSEEEEEEETTT---T----EEEEEETTSST-TSCCCEEEEEE-EEEETT------TTESE------
T ss_pred CCeEEEEEECCCccEEEEEEEECCC---C----EEEEeCCCCcc-cccccccCcce-EEeecc------CCCCc------
Confidence 3699999998888999999997543 2 38999999983 22223444411 133331 22344
Q ss_pred eEEEEEEEeCCeEEEEEeCC
Q 005279 594 IVYVYLQVDHSIVEGFAQGG 613 (704)
Q Consensus 594 ~l~LrI~VD~SivEvF~n~G 613 (704)
++||||||+|+||||+|||
T Consensus 68 -l~L~i~vD~SsvEiFvNdG 86 (86)
T PF08244_consen 68 -LKLRIFVDRSSVEIFVNDG 86 (86)
T ss_dssp -EEEEEEEETTEEEEEETTT
T ss_pred -EEEEEEEeCCEEEEEECCC
Confidence 7999999999999999997
|
It forms a beta sandwich module [].; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 1W2T_C 1UYP_A 3UGG_A 3UGH_B 3UGF_B .... |
| >cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.2e-09 Score=115.70 Aligned_cols=178 Identities=17% Similarity=0.154 Sum_probs=114.3
Q ss_pred CCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCC--C----CCCcEEeeeEEEecCC
Q 005279 129 NWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQW--Y----DIMGVWTGSATILPDG 202 (704)
Q Consensus 129 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~--y----D~~Gv~SGSavv~~dG 202 (704)
+.+-||. +++++|.|+||...... ...+..++|+||+||++++.+|.+... + ...++|.+.++. .+|
T Consensus 6 ~~~~DP~-i~~~~~~yy~~~t~~~~-----~~~i~~~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g 78 (288)
T cd09000 6 GFYPDPS-ICRVGDDYYLVTSSFEY-----FPGVPIFHSKDLVNWELIGHALTRPSQLDLDGLPDSGGIWAPTIRY-HDG 78 (288)
T ss_pred CCCCCCC-EEEECCEEEEEECCccc-----CCCceEEECCCcCCcEEcccccCCcccccccCCCCCCceEcceEEE-ECC
Confidence 4667997 78889999998532111 235889999999999999988754321 1 345799999865 699
Q ss_pred cEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecC----
Q 005279 203 KLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRIN---- 278 (704)
Q Consensus 203 ~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~---- 278 (704)
+++|+|++........+.+|.+++.. ..|+. |++.. ...+||.+++ .++|++||+.+....
T Consensus 79 ~yy~yy~~~~~~~~~~~~v~~s~~p~----gpw~~----~~~~~------~~~iDp~vf~-d~dG~~Y~~~~~~~~~~~~ 143 (288)
T cd09000 79 TFYLITTNVDGMKDGGNFIVTADDPA----GPWSD----PVWLD------SGGIDPSLFF-DDDGKVYLVGNGWDERRGY 143 (288)
T ss_pred EEEEEEEecCCCCCCceEEEEeCCCC----CCCcC----CEecC------CCccCCceeE-cCCCCEEEEecccCCcccc
Confidence 99999998753323456788887652 45652 33321 1458999665 578999999886421
Q ss_pred -CeeEEEEEEeCCCCCcEEeccee--ccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeC
Q 005279 279 -RTGITFVYDTKDFINYELLRGVL--HGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMD 344 (704)
Q Consensus 279 -~~G~~llY~S~Dl~~W~~~~~l~--~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~ 344 (704)
..+.+.+.+. |...|+..+... .........|+|.+|+.++ +++|..|..
T Consensus 144 ~~~~~i~~~~l-~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~g---------------~YYl~ys~~ 196 (288)
T cd09000 144 NGHGGIWLQEI-DLETGKLLGEPKVIWNGTGGRWPEGPHLYKRDG---------------WYYLLIAEG 196 (288)
T ss_pred CCCCcEEEEEE-ccccCCCCCCcEEEEeCCCCCCcccCeEEEECC---------------EEEEEEecC
Confidence 1223333333 333444433221 1111124689999998752 788877754
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >cd08983 GH43_4 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.7e-09 Score=112.97 Aligned_cols=181 Identities=12% Similarity=0.066 Sum_probs=118.6
Q ss_pred CCccCCCcceEE--CCEEEEEEeeCCCCCCC-CCcEEEEEEeCCCcceeecccccccCCCCCCCcEEeeeEEEec-CCcE
Q 005279 129 NWMNDPNGPVFY--KGWYHLFYQYNPNGAIW-GDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILP-DGKL 204 (704)
Q Consensus 129 gWmNDPNG~~y~--~G~YHLFYQ~nP~~~~w-G~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~-dG~~ 204 (704)
+-+-||. +++. +|+||||+--.-....+ +.....+++|+||+||++...++.... ...++|...++.++ +|++
T Consensus 16 ~~~rDP~-I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~--~~~~~WAPev~~d~~~g~y 92 (276)
T cd08983 16 KGLRDPF-ILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPP--NAGNTWAPEAFWDAERGQY 92 (276)
T ss_pred CCccCCe-EEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCC--CcCcEeCccceEcCCCCeE
Confidence 4567997 5666 89999999754322122 456789999999999999887653211 24578999987654 7999
Q ss_pred EEEEecccCC-----ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCC
Q 005279 205 MMLYTGSTNE-----SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINR 279 (704)
Q Consensus 205 ~~~YTG~~~~-----~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~ 279 (704)
+|+|+..... ....+..|.+.| +.+|+.. .|++. ++ ....|+.++. .+|+|||++....+
T Consensus 93 ~~~~s~~~~~~~~~~~~~~i~~~tt~D-----f~tft~p--~~~~~--~~---~~~ID~~v~~--~~g~~Yl~~k~~~~- 157 (276)
T cd08983 93 VVYWSSRLYDNTGGFYNYRLYATTTSD-----FVTFTEP--KVWID--LG---ANVIDTTVVK--VGGTYYRFYKNEGS- 157 (276)
T ss_pred EEEEecccCCCCCCCccEEEEEEecCc-----ccccCCC--eEeec--CC---CCeEeeEEEE--eCCEEEEEEecCCC-
Confidence 9999987542 122333344434 3788752 56665 22 3568998653 35999999865432
Q ss_pred eeEEEEEEeCCCC-CcEEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEee
Q 005279 280 TGITFVYDTKDFI-NYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASM 343 (704)
Q Consensus 280 ~G~~llY~S~Dl~-~W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~ 343 (704)
+.+.+.+|++|. .|+...... ......-|-|.+|+..+. .+|+|.++.
T Consensus 158 -~~i~~~~s~~l~g~~~~~~~~~--~~~~~~~EgP~v~k~~~~-------------~~y~L~~d~ 206 (276)
T cd08983 158 -KDIELARSKSLTGPWTIVGTGD--AGWGGAVEGPTVFKLNNG-------------GGWYLYGDN 206 (276)
T ss_pred -CcEEEEEeCCCCCCceEecccc--cCCCCceeCCeEEEECCC-------------CEEEEEEEE
Confidence 346677888876 677644321 111236899999999742 267777654
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd09003 GH43_AXH_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.7e-09 Score=116.33 Aligned_cols=186 Identities=15% Similarity=0.265 Sum_probs=121.4
Q ss_pred CCccCCCcceEECCEEEEEEeeCCCCC---------CCCCcEEEEEEeCCCcceeecccccccC--CCCCCCcEEeeeEE
Q 005279 129 NWMNDPNGPVFYKGWYHLFYQYNPNGA---------IWGDIVWGHAVSKDLIHWYHLPLAMVAD--QWYDIMGVWTGSAT 197 (704)
Q Consensus 129 gWmNDPNG~~y~~G~YHLFYQ~nP~~~---------~wG~~~WGHAvS~DLvhW~~lp~AL~Pd--~~yD~~Gv~SGSav 197 (704)
.+.-||. ++.++|+|+||....-... .+....+-..+|+||+||+.++.++.|. ..| ..++|.+.++
T Consensus 7 ~~~aDP~-~~~~~g~yY~~~t~~~~~~~~~~~~~~~~~~~~~i~v~~S~DL~~W~~~g~v~~~~~~~~w-~~~~WAP~v~ 84 (311)
T cd09003 7 RYGADPT-AVVYNGRVYVYTTNDDYEYDSNTIKDNNYYNINDITVISSDDMVNWTDHGEIFVPNGIAKW-AGNSWAPSIA 84 (311)
T ss_pred CccCCCC-eEEECCEEEEEeCCCCccccccccccCCccccCcEEEEECCCCCCcEEcccccCcCCCCCc-ccccCCCceE
Confidence 4567997 5788999999987643321 2223467788999999999999888632 233 3478999986
Q ss_pred EecC----CcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCC-CCCCCcC-ccCCeeEEecCCCeEEE
Q 005279 198 ILPD----GKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPP-PGIGAKD-FRDPTTAWLTSEGKWRI 271 (704)
Q Consensus 198 v~~d----G~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p-~g~~~~~-fRDP~Vvw~~~~g~w~M 271 (704)
. .+ |+++|+|+.. ...+++|+|+++. ..|+...+.|++... ++..... -.||.+++ ++||++||
T Consensus 85 ~-~~~~~~gkyylyy~~~----~~~igva~SdsP~----GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~-DdDG~~Yl 154 (311)
T cd09003 85 V-KKINGKGKFYLYFANG----GGGIGVLTADSPV----GPWTDPLGKPLITGSTPGCAGVVWLFDPAVFV-DDDGQGYL 154 (311)
T ss_pred E-eccCCCCEEEEEEecC----CCeEEEEEcCCCC----CCcccCCCCeeecCCCCCccCCccccCCCeEE-CCCCCEEE
Confidence 4 56 9999999864 2347899987652 579876567877642 3322122 36999655 67899999
Q ss_pred EEeeecC-----CeeEEEEEE-eCCCCCcEEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeC
Q 005279 272 AIGSRIN-----RTGITFVYD-TKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMD 344 (704)
Q Consensus 272 v~Gs~~~-----~~G~~llY~-S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~ 344 (704)
+.|+... ..+.+.+.+ ++|+..-. ++... ......+|.|-+++.++ +++|..|..
T Consensus 155 ~~g~~~~~~~~~~~~~i~i~~l~~D~~~~~--g~~~~-i~~~~~~Egp~~~K~~G---------------~YYL~ys~~ 215 (311)
T cd09003 155 YFGGGVPGGRWANPNTARVIKLGDDMISVD--GSAVT-IDAPYFFEASGLHKING---------------TYYYSYCTN 215 (311)
T ss_pred EECCccCCCccccCCCEEEEEeCCCceecc--CCceE-ccCCCceEeeeEEEECC---------------EEEEEEeCC
Confidence 9985321 112333444 34665422 22211 01124799999998752 677877754
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose |
| >cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins | Back alignment and domain information |
|---|
Probab=99.05 E-value=6e-09 Score=113.48 Aligned_cols=192 Identities=17% Similarity=0.195 Sum_probs=122.3
Q ss_pred CCCCCcccccccccceeecC-CC-C----ccCCCcceEECCEEEEEEeeCCCC-CCCCCcEEEEEEeCCCc-ceeecc-c
Q 005279 108 YPWTNNMLSWQRTAFHFQPQ-KN-W----MNDPNGPVFYKGWYHLFYQYNPNG-AIWGDIVWGHAVSKDLI-HWYHLP-L 178 (704)
Q Consensus 108 ~~~~~~~~~w~Rp~~Hf~P~-~g-W----mNDPNG~~y~~G~YHLFYQ~nP~~-~~wG~~~WGHAvS~DLv-hW~~lp-~ 178 (704)
+..+..+..|.|-..=|.+. .+ | +--|. +++++|+|||||+..-.. ..-+..+.|+|+|.|.. .|+++. +
T Consensus 83 ~A~S~Dgv~W~~~g~~L~~~~~g~Wd~~~vwaP~-Vi~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~GpWtr~d~P 161 (349)
T cd08992 83 HATSKDGWTWKEEGPAIGRGEKGAYDDRSVFTPE-VLEHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPYGPWTKSDEP 161 (349)
T ss_pred EEECCCCCCceECCccccCCCCCCccccceECcE-EEEECCEEEEEEEecccccCCCCcceEEEEEECCcccccccCCCc
Confidence 33345566887766333221 22 3 33464 678899999999953211 11123577999988877 698764 3
Q ss_pred ccccCC------------------CCCCCcEEeeeEEEecCCcEEEEEecccC-------CceeeEEEEEeCCCCCCccc
Q 005279 179 AMVADQ------------------WYDIMGVWTGSATILPDGKLMMLYTGSTN-------ESVQVQNLAYPADPSDPLLI 233 (704)
Q Consensus 179 AL~Pd~------------------~yD~~Gv~SGSavv~~dG~~~~~YTG~~~-------~~~q~q~lA~S~D~~D~~l~ 233 (704)
.|.|.. .+|..++...++ +..+|+++|||+|+.. ...+.+++|+++++- .
T Consensus 162 il~p~~dg~w~~d~~~~~~~~~~g~wD~~~v~~P~v-~~~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~----G 236 (349)
T cd08992 162 ILSPSNDGIWKGDEDNRFLVKKKGSFDSHKVHDPCL-FPFNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPE----G 236 (349)
T ss_pred EecCCcCCceeeccCceeEeccCCCcccCceECCEE-EEECCEEEEEEEccccCcccccCCCCceEEEEEECCCC----C
Confidence 455542 356777777776 4679999999999752 124679999998863 6
Q ss_pred eeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeE-EEEEeeecCCeeEEEEEEeCCCCCcEEecceeccCCCCCceee
Q 005279 234 KWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKW-RIAIGSRINRTGITFVYDTKDFINYELLRGVLHGVPNTGMWEC 312 (704)
Q Consensus 234 ~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w-~Mv~Gs~~~~~G~~llY~S~Dl~~W~~~~~l~~~~~~~gmWEC 312 (704)
.|+|.+.|||+.. .+ ..+ +|... +.+ .|+.. .....|. +..|+|.++|+....+.....-.|..+|
T Consensus 237 Pf~r~~~nPi~~~------~~--~~~-~~~~~-~~~~~~~~~-d~~~~~~--~~~~~dg~~~~~~~~~~~~~~~~~~~~~ 303 (349)
T cd08992 237 PYVKSPYNPITNS------GH--ETC-VWQYK-GGIAAMLTT-DGPEKNT--IQFAPDGINFEIMAHIKGAPEAIGPYRR 303 (349)
T ss_pred CCEeCCCCcccCC------CC--ceE-EEecC-CceEEEEec-cCCCCce--EEeCCCCccEEEeeeccCCCccccCccC
Confidence 7999999999852 12 236 79654 455 45543 2222344 4679999999987766443223456677
Q ss_pred eeeEEc
Q 005279 313 VDFYPV 318 (704)
Q Consensus 313 Pdlf~l 318 (704)
||-+.-
T Consensus 304 ~~~~~~ 309 (349)
T cd08992 304 PDADED 309 (349)
T ss_pred cccccC
Confidence 765544
|
This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08988 GH43_ABN Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.96 E-value=4.2e-08 Score=103.81 Aligned_cols=129 Identities=21% Similarity=0.253 Sum_probs=88.2
Q ss_pred CCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCC-------CCCcEEeeeEEEecCCcEE
Q 005279 133 DPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWY-------DIMGVWTGSATILPDGKLM 205 (704)
Q Consensus 133 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~y-------D~~Gv~SGSavv~~dG~~~ 205 (704)
||. ++.++|+|+||.-. + .+..++|+||+||+..+.+|.+...+ ...++|...++ ..+|+++
T Consensus 2 DP~-vi~~~~~YY~~~T~-~--------g~~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~-~~~G~yy 70 (279)
T cd08988 2 DPV-IIKEGDTWYVFGTG-P--------GITILSSKDLVNWTYSGSAFATEPTWKKRVPPSFDGHLWAPDIY-QHNGKFY 70 (279)
T ss_pred CCE-EEEECCEEEEEEec-C--------CEEEEECCCcCCccccCccccCCCccccccCCCCCCCEecceEE-EECCEEE
Confidence 896 67889999998653 1 36789999999999999888543221 23579999986 4689999
Q ss_pred EEEecccCC-ceeeEEEEEeCCCCCCcc-ceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeee
Q 005279 206 MLYTGSTNE-SVQVQNLAYPADPSDPLL-IKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSR 276 (704)
Q Consensus 206 ~~YTG~~~~-~~q~q~lA~S~D~~D~~l-~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~ 276 (704)
|+|++.... ..+.+++|++++...|-- ..|++ ..|++.+.... ...-.||.+++ ++||++||+.|+.
T Consensus 71 lyys~~~~~~~~~~igva~s~~p~Gp~~~~~w~~--~~~i~~~~~~~-~~~~iDp~~f~-DdDG~~Yl~~g~~ 139 (279)
T cd08988 71 LYYSVSAFGSNTSAIGLAVNKTIDGPSPDYGWEK--GGVVISSDASD-NYNAIDPAIIF-DQHGQPWLSFGSF 139 (279)
T ss_pred EEEEeccCCCCCceEEEEEcCCCCCCCcCcCccc--cCceEecCCCC-CCCccCCceEE-cCCCCEEEEeccc
Confidence 999986532 246678999987532210 12432 25666532111 12347999655 6789999999863
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla |
| >cd08981 GH43_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.94 E-value=5.6e-08 Score=103.74 Aligned_cols=135 Identities=18% Similarity=0.144 Sum_probs=93.3
Q ss_pred CCccCCCcceEE--CCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCC-CCCCCcEEeeeEEEecCCcEE
Q 005279 129 NWMNDPNGPVFY--KGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQ-WYDIMGVWTGSATILPDGKLM 205 (704)
Q Consensus 129 gWmNDPNG~~y~--~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~-~yD~~Gv~SGSavv~~dG~~~ 205 (704)
.++-||. ++++ +|.||||.-............+.+.+|+||+||+..+.++.+.. .+...++|...++ ..+|+++
T Consensus 4 ~~~~DP~-v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~-~~~G~yy 81 (291)
T cd08981 4 IRIRDPF-ILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVH-EYKGRYY 81 (291)
T ss_pred ccccCCE-EEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeee-eeCCEEE
Confidence 4578997 6777 99999998654322111124579999999999999998886543 3345679999985 5799999
Q ss_pred EEEecccCC-ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEee
Q 005279 206 MLYTGSTNE-SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGS 275 (704)
Q Consensus 206 ~~YTG~~~~-~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs 275 (704)
|+|+..... ....+.+|++++.- ..|+.....|+... + ....||.+ +.+++|++||+.+.
T Consensus 82 ly~s~~~~~~~~~~~~va~s~~p~----GP~~~~~~~~~~~~--~---~~~iDp~~-f~DdDG~~Yl~~~~ 142 (291)
T cd08981 82 MFATFHNPGGERRGTAILVSDSPE----GPFVPHSDGPVTPE--D---WMCLDGTL-YVDEDGKPWMVFCH 142 (291)
T ss_pred EEEEeccCCCceeeEEEEECCCCC----CCCEeCCCCccCCC--C---CceEcCce-EEcCCCCEEEEEEe
Confidence 999876543 22346788887642 46876543454321 1 23479985 44678999999874
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=98.79 E-value=4e-07 Score=95.97 Aligned_cols=125 Identities=18% Similarity=0.127 Sum_probs=86.8
Q ss_pred CCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCC------CCCcEEeeeEEEecCC
Q 005279 129 NWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWY------DIMGVWTGSATILPDG 202 (704)
Q Consensus 129 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~y------D~~Gv~SGSavv~~dG 202 (704)
+..-||. +++++|.|+||+..... .......+|+||+||+..+.++...... ...++|...++ ..+|
T Consensus 6 ~~~~DP~-ii~~~~~yY~~~t~~~~-----~~g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~-~~~G 78 (269)
T cd08989 6 GDNPDPS-IIRAGDDYYMASSTFEW-----FPGVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIWAPCLS-YYDG 78 (269)
T ss_pred CCCCCCc-EEEECCeEEEEECcccc-----CCCcEEEECCccCCCEEccccccCccccccccCCCCCcEEcceEE-EECC
Confidence 4566996 78899999999853211 1235678999999999988776532111 23579999885 5799
Q ss_pred cEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEee
Q 005279 203 KLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGS 275 (704)
Q Consensus 203 ~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs 275 (704)
+++|+|+.........+++|++++.. ..|+. |+... ..-.||.+++ +++|+.||+.++
T Consensus 79 ~yy~yy~~~~~~~~~~i~va~sd~~~----Gpw~~----~~~~~------~~~IDp~~f~-D~dG~~Yl~~~~ 136 (269)
T cd08989 79 KFWLIYTAVKVWKDCHNYLFTAEDIT----GPWSR----PIFLN------YGGFDPSLFH-DDDGKKYLINMG 136 (269)
T ss_pred EEEEEEeccccCCCceEEEEEECCCC----CCCcC----CEECC------CCcccCceEE-cCCCCEEEEecC
Confidence 99999998754333567889887653 35653 44331 1347999655 679999999875
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended |
| >cd08980 GH43_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.77 E-value=4.6e-07 Score=96.00 Aligned_cols=187 Identities=14% Similarity=0.089 Sum_probs=111.9
Q ss_pred CCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccc--cCCC-CCCCcEEeeeEEEecCCcEEEEEe
Q 005279 133 DPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMV--ADQW-YDIMGVWTGSATILPDGKLMMLYT 209 (704)
Q Consensus 133 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~--Pd~~-yD~~Gv~SGSavv~~dG~~~~~YT 209 (704)
||. ++.+++.|+||+--.. .....++|+||+||+.....+. +..+ ....++|...+. ..+|+++|+|+
T Consensus 2 DP~-v~~~~d~yY~~~T~~~-------~~~~i~~S~dl~~w~~~~~~~~~~~~~~~~~~~~~WAP~i~-~~~g~yylyys 72 (288)
T cd08980 2 DPW-VIRHDGYYYFTATTGE-------DRIELRRSDTLAGLATAESKVVWTPPDSGPYSGNLWAPELH-YIDGKWYIYFA 72 (288)
T ss_pred CCe-EEEECCEEEEEEEeCC-------CcEEEEecCChhHhhcCCcEEEecCCCCCCccccEECceEE-EECCEEEEEEE
Confidence 896 6778899999975321 4478999999999998754322 2221 234689999986 57899999999
Q ss_pred cccC--CceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecC---CeeEEE
Q 005279 210 GSTN--ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRIN---RTGITF 284 (704)
Q Consensus 210 G~~~--~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~---~~G~~l 284 (704)
.... ...+.+++|.+++..++ +..|+.. .+++... + ..-.||.++. + +|++||+.+.... ....+.
T Consensus 73 ~~~~~~~~~~~~~v~~a~~~~~~-~Gpw~~~--~~~~~~~-~---~~~iDp~~~~-d-dG~~Yl~~~~~~~~~~~~~~i~ 143 (288)
T cd08980 73 AGDGGGNANHRMYVLENAGADPP-TGPWTFK--GRLADPT-D---RWAIDGTVFE-H-NGQLYFVWSGWEGRTNGNQNLY 143 (288)
T ss_pred ccCCCCCcceeEEEEEeCCCCCC-CCCceEe--eEeccCC-C---CeeeeeEEEE-E-CCEEEEEEEccCCCCCCCccEE
Confidence 8764 23466778887652123 4679874 3443211 1 1236999543 3 5999999875421 122344
Q ss_pred EEEeCCCCCcEEecce-eccCCC-------CCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCCCceEEEEE
Q 005279 285 VYDTKDFINYELLRGV-LHGVPN-------TGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIG 354 (704)
Q Consensus 285 lY~S~Dl~~W~~~~~l-~~~~~~-------~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~~~~~Y~iG 354 (704)
+-+.++...+. +.. ....+. .+.-|-|.+++.++ +++|..|........|.+|
T Consensus 144 ~~~l~~~~~~~--g~~~~i~~p~~~we~~~~~~~EgP~~~k~~G---------------~yYl~yS~~~~~~~~Y~v~ 204 (288)
T cd08980 144 IAKMSNPWTLT--GPRVLISRPEYDWERQGPGVNEGPAALKRNG---------------KVFLTYSASGSWTPDYCLG 204 (288)
T ss_pred EEECCCCCccC--CcceEecCCCCCceecCceeeECcEEEEECC---------------EEEEEEECCCCCCCCCEEE
Confidence 44544433332 221 111111 12457777777642 6777777655434456555
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function | Back alignment and domain information |
|---|
Probab=98.73 E-value=8.2e-08 Score=100.70 Aligned_cols=98 Identities=24% Similarity=0.379 Sum_probs=75.5
Q ss_pred eeEEEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCC--CCCCCcCccCCeeEEecCCCeEEE
Q 005279 194 GSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPP--PGIGAKDFRDPTTAWLTSEGKWRI 271 (704)
Q Consensus 194 GSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p--~g~~~~~fRDP~Vvw~~~~g~w~M 271 (704)
..++ ..||+++|+||+........+++|+|.|+ ++|++.+ +|+|.++ ...+...++||.|+. .+|+|+|
T Consensus 3 P~v~-~~~G~y~l~y~~~~~~~~~~ig~A~S~Dg-----~~~~~~~-~~~i~p~~~~~~~~~gv~dP~v~~--~~g~y~m 73 (268)
T cd08993 3 PAVV-YDNGEFYLLYRAAGNDGVIRLGLARSRDG-----LHFEIDP-DPPVWPPPEDGFEEGGVEDPRIVK--IDDTYYI 73 (268)
T ss_pred CeEE-EECCEEEEEEEEECCCCceEEEEEEECCC-----ceEEECC-cceEcCCCCCcccccCccCcEEEE--ECCEEEE
Confidence 3454 57999999999876555678999999995 8999975 5666542 234567889999653 5889999
Q ss_pred EEeeec--CCeeEEEEEEeCCCCCcEEecce
Q 005279 272 AIGSRI--NRTGITFVYDTKDFINYELLRGV 300 (704)
Q Consensus 272 v~Gs~~--~~~G~~llY~S~Dl~~W~~~~~l 300 (704)
++++.. .....+.+++|+|+.+|++.+..
T Consensus 74 ~Yta~~~~~~~~~i~lA~S~D~~~W~~~~~~ 104 (268)
T cd08993 74 TYAARPNAPNGTRIGLATTKDFITFERLGTS 104 (268)
T ss_pred EEEccCCCCCCcEEEEEEeCCcceEEEeccc
Confidence 998865 34457889999999999998654
|
This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=98.72 E-value=4.7e-07 Score=95.44 Aligned_cols=170 Identities=15% Similarity=0.100 Sum_probs=107.4
Q ss_pred CCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCC-----------CCCCcEEeeeEE
Q 005279 129 NWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQW-----------YDIMGVWTGSAT 197 (704)
Q Consensus 129 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~-----------yD~~Gv~SGSav 197 (704)
++.-||. +++++|+|++|.-..-. ...+...+|+||+||+..+.++....+ --..++|...++
T Consensus 9 ~~~~DP~-v~~~~~~yY~~~t~~~~-----~~gi~v~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~WAP~v~ 82 (269)
T cd09001 9 ADYPDPD-VIRVGDDYYMVSTTMHY-----SPGAPILHSKDLVNWEIIGYVYDRLDDGDAYNLENGGNAYGKGQWAPSLR 82 (269)
T ss_pred CCCCCCe-EEEECCEEEEEECCccc-----CCCCEEEEcccccCCeEcccccccccccccccccccCCCCCCCEECCceE
Confidence 4557996 67889999999753211 123567899999999998877643211 013479999986
Q ss_pred EecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec
Q 005279 198 ILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI 277 (704)
Q Consensus 198 v~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~ 277 (704)
. .+|+++|+|+... +.+.+|++++.. ..|+.. +++ ....||.+++ +++|+.||+.++.
T Consensus 83 ~-~~gkyy~yys~~~----~~~~v~~a~~p~----Gpw~~~--~~~---------~~~iDp~~f~-D~dG~~Yl~~~~~- 140 (269)
T cd09001 83 Y-HNGTFYVFFCTNT----GGTYIYTADDPE----GPWTKT--ALD---------GGYHDPSLLF-DDDGTAYLVYGGG- 140 (269)
T ss_pred E-ECCEEEEEEEecC----CCeEEEEcCCCC----CCCcCC--CcC---------CCcccCceEE-cCCCCEEEEeCCC-
Confidence 4 6999999999862 346788877642 457543 111 1347999655 5789999998753
Q ss_pred CCeeEEEEE-EeCCCCCcEEecceeccCCC--CCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCC
Q 005279 278 NRTGITFVY-DTKDFINYELLRGVLHGVPN--TGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDD 345 (704)
Q Consensus 278 ~~~G~~llY-~S~Dl~~W~~~~~l~~~~~~--~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~ 345 (704)
+ +.+. -++|+....-....+...+. .+.-|-|.+++-++ +++|..|...
T Consensus 141 ---~-i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~G---------------~YYl~~S~~~ 192 (269)
T cd09001 141 ---T-IRLVELSPDLTGVGGKDQVIIDAGEEIGLGAEGSHLYKING---------------YYYIFNIAWG 192 (269)
T ss_pred ---c-EEEEEECcccCCcCCCceEEEeCCCccccccccCeEEEECC---------------EEEEEEecCC
Confidence 2 2223 25676655211112211111 23678888887542 6778777543
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.71 E-value=5.8e-07 Score=99.53 Aligned_cols=185 Identities=19% Similarity=0.186 Sum_probs=116.1
Q ss_pred cCCCcceE-ECCEEEEEEeeCCCC----CCCCCcEEEEEEeCCCc----ceeecccccccCCCC-CCCcEEeeeEEEec-
Q 005279 132 NDPNGPVF-YKGWYHLFYQYNPNG----AIWGDIVWGHAVSKDLI----HWYHLPLAMVADQWY-DIMGVWTGSATILP- 200 (704)
Q Consensus 132 NDPNG~~y-~~G~YHLFYQ~nP~~----~~wG~~~WGHAvS~DLv----hW~~lp~AL~Pd~~y-D~~Gv~SGSavv~~- 200 (704)
-|+.|=+. ++|+.-+|-.--|.. ..|+.-|+++.-|++.. +|++.+.++.....+ ...--|||||+++.
T Consensus 63 qd~~G~~~~~~Gy~vvfaL~a~r~~~~~~Rh~~A~I~~fY~k~G~~~~~~W~~~G~vf~~g~~~~~~s~EWSGSA~l~~~ 142 (428)
T PF02435_consen 63 QDADGNVVNYNGYQVVFALTADRHEDPDDRHDDARIYLFYSKDGDNANDGWKNGGPVFPEGASFVPGSREWSGSATLNND 142 (428)
T ss_dssp E-TTSSBEEBTTEEEEEEEEE-TT--GGGCSCGEEEEEEEEETT--SGGG-EEEEESS-TTCCCCGCEEEEEEEEEESTT
T ss_pred ecccccEEEECCEEEEEEEecCCccCCccccCCcEEEEEEecCCCCccCCceECcccCCCCCCCCccCcEecCceEEcCC
Confidence 35666444 699777787766653 35678999999999999 999999877555431 23457999999887
Q ss_pred CCcEEEEEecccC----Cceee---EE--EEEeCCCCCCccceeEeeCCCceecCCCCC--------CCcCccCCeeEEe
Q 005279 201 DGKLMMLYTGSTN----ESVQV---QN--LAYPADPSDPLLIKWVKYPGNPVLVPPPGI--------GAKDFRDPTTAWL 263 (704)
Q Consensus 201 dG~~~~~YTG~~~----~~~q~---q~--lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~--------~~~~fRDP~Vvw~ 263 (704)
||++.||||.... ...|. ++ ++...+. ...+..|.++ ..++. +.|. ....||||+++-.
T Consensus 143 dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~-~v~i~g~~~~--~~lfe-~DG~~Yqt~~Q~~~~afRDP~~f~D 218 (428)
T PF02435_consen 143 DGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDD-GVWITGFSNH--HELFE-GDGKHYQTYEQNPGYAFRDPHVFED 218 (428)
T ss_dssp TSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECST-EEEEEEEEEE--EEEES---SSSB--HHHHHH---EEEEEEEE
T ss_pred CCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCC-ceeEccccce--eEeec-cchhhhhChhhcCCccccCCeeEEC
Confidence 8999999998542 21222 22 3333332 2233445544 34554 4432 1267999996543
Q ss_pred cCCCeEEEEEeeec---C------------------------------CeeEEEEEEeCC--CCCcEEecceeccCCCCC
Q 005279 264 TSEGKWRIAIGSRI---N------------------------------RTGITFVYDTKD--FINYELLRGVLHGVPNTG 308 (704)
Q Consensus 264 ~~~g~w~Mv~Gs~~---~------------------------------~~G~~llY~S~D--l~~W~~~~~l~~~~~~~g 308 (704)
..+|+-||+.-+.. + ..|++.+.+.+| +..|+++++|+.+..=..
T Consensus 219 P~~G~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~~~~w~~~~PL~~a~~v~d 298 (428)
T PF02435_consen 219 PEDGKRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDDGTVWELLPPLLSANGVND 298 (428)
T ss_dssp TTTTEEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTTTSEEEEEEEEEEETTTBS
T ss_pred CCCCcEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCCCCccEEeCcceecccccc
Confidence 36898888874431 0 257777777654 568999999998754345
Q ss_pred ceeeeeeEEcCC
Q 005279 309 MWECVDFYPVST 320 (704)
Q Consensus 309 mWECPdlf~l~~ 320 (704)
+.|=|+++++++
T Consensus 299 e~ERP~iv~~~g 310 (428)
T PF02435_consen 299 ELERPHIVFMNG 310 (428)
T ss_dssp -EEEEEEEEETT
T ss_pred cccCCcEEEECC
Confidence 899999999973
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A .... |
| >cd08986 GH43_7 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.66 E-value=9e-07 Score=93.34 Aligned_cols=130 Identities=19% Similarity=0.191 Sum_probs=85.8
Q ss_pred CccCCCcceEE-CCEEEEEEeeCCCCC----CC-CCcEEEEEEeCCCcceeecccccccCCC------------CCCCcE
Q 005279 130 WMNDPNGPVFY-KGWYHLFYQYNPNGA----IW-GDIVWGHAVSKDLIHWYHLPLAMVADQW------------YDIMGV 191 (704)
Q Consensus 130 WmNDPNG~~y~-~G~YHLFYQ~nP~~~----~w-G~~~WGHAvS~DLvhW~~lp~AL~Pd~~------------yD~~Gv 191 (704)
||-||. ++.. +|.|+|+.-....+. .| ..-..-.++|+||+||+..+.++..... ....++
T Consensus 1 ~~rDP~-v~~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 79 (269)
T cd08986 1 WIRDTY-VTLGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAV 79 (269)
T ss_pred CCcCCe-EEecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCc
Confidence 688997 4555 679999887442221 01 1234668999999999998877754321 124578
Q ss_pred EeeeEEEecCCcEEEEEecccCC-ceeeEEEEEeCCCCCCccceeEeeCCC-ceecCCCCCCCcCccCCeeEEecCCCeE
Q 005279 192 WTGSATILPDGKLMMLYTGSTNE-SVQVQNLAYPADPSDPLLIKWVKYPGN-PVLVPPPGIGAKDFRDPTTAWLTSEGKW 269 (704)
Q Consensus 192 ~SGSavv~~dG~~~~~YTG~~~~-~~q~q~lA~S~D~~D~~l~~W~K~~~n-PVl~~p~g~~~~~fRDP~Vvw~~~~g~w 269 (704)
|...+. ..+|+++|+|+..... ....+.+|++++.. ..|+..... |+ ..-.||.++ .+++|++
T Consensus 80 WAP~v~-~~~g~yyl~~s~~~~~~~~~~i~va~a~~p~----Gp~~~~~~~~~~---------~~~iD~~~f-~D~DG~~ 144 (269)
T cd08986 80 WAPELH-YIKGRWYLVACMNNPGYGGSSILLSTSGKIE----GPYKHITGNKPL---------FPGIDPSLF-EDDDGKV 144 (269)
T ss_pred CCceEE-EECCEEEEEEEccCCCCCceEEEEEeCCCCC----CCcEeccCCCCC---------CCccCCceE-EcCCCCE
Confidence 988885 4689999999976432 23456778776542 457764322 11 124699954 4678999
Q ss_pred EEEEee
Q 005279 270 RIAIGS 275 (704)
Q Consensus 270 ~Mv~Gs 275 (704)
||+.++
T Consensus 145 Yl~~~~ 150 (269)
T cd08986 145 YLVWHN 150 (269)
T ss_pred EEEeeC
Confidence 999875
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases | Back alignment and domain information |
|---|
Probab=98.54 E-value=3.6e-06 Score=89.16 Aligned_cols=211 Identities=16% Similarity=0.278 Sum_probs=130.2
Q ss_pred ccccccceeecCCCC---ccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccc---cCCCCCCC
Q 005279 116 SWQRTAFHFQPQKNW---MNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMV---ADQWYDIM 189 (704)
Q Consensus 116 ~w~Rp~~Hf~P~~gW---mNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~---Pd~~yD~~ 189 (704)
+|--..--.+|..|| +-||- .++++|+||+|--... + ..|+-+-+. |+||...+.|+. .... ...
T Consensus 6 ~w~stg~l~~pk~~~~~~lkDPt-iv~~nGkYyvYgT~~~-~-----~~~~s~~~S-f~~Ws~~g~A~q~~l~~~~-~~~ 76 (303)
T cd08987 6 RWTSTGPLISPKSDWIVAIKDPT-VVYYNGRYHVYATTAD-A-----GNYGSMYFN-FTDWSQAASATQYYLQNGN-MTG 76 (303)
T ss_pred eeccCCccccCCCCCeeeecCCe-EEEECCEEEEEEccCC-C-----CCceeeeec-ccCHhHhccchhhcccCCC-CCc
Confidence 444445567888999 78997 5788999999966543 1 224333333 999998887763 1111 234
Q ss_pred cEEeeeEE-EecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCe
Q 005279 190 GVWTGSAT-ILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGK 268 (704)
Q Consensus 190 Gv~SGSav-v~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~ 268 (704)
+.|...+. +.+++++||+|+- + ..+.|++.|..+| ..|... .|++...........-|++|+ .++++
T Consensus 77 ~fwAPqVfyf~pk~kwYL~Yq~---~---~~~yaTs~dp~~P--~~ws~~--qpl~~~~~~~~~~~~ID~~vI--~Dd~~ 144 (303)
T cd08987 77 YRVAPQVFYFAPQNKWYLIYQW---W---PAAYSTNSDISNP--NGWSAP--QPLFSGTPNGSPGGWIDFWVI--CDDTN 144 (303)
T ss_pred ccccCEEeeeccCCEEEEEEec---C---ceEEEeCCCCCCC--CccCCC--cccccCcccCCCCCccceeEE--eCCCC
Confidence 57888764 2689999999994 1 2568899888776 457653 677653222223456899974 46888
Q ss_pred EEEEEeeecCCeeEEEEEEeC-CCCCcE--Eec--ceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEee
Q 005279 269 WRIAIGSRINRTGITFVYDTK-DFINYE--LLR--GVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASM 343 (704)
Q Consensus 269 w~Mv~Gs~~~~~G~~llY~S~-Dl~~W~--~~~--~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~ 343 (704)
.||+... . .| .+|+++ .+.+.- +.. .+..........|-|..|++.+. .+++|+++.
T Consensus 145 ~YLff~~-d--nG--~iyra~~~~~nFp~~~~~~~~~~~~~~~~~lfEa~~Vykv~G~-------------~~YlmiveA 206 (303)
T cd08987 145 CYLFFSD-D--NG--KLYRSSTTLGNFPNGGTETVIIMSDSNKNNLFEASNVYKVKGQ-------------NQYLLIVEA 206 (303)
T ss_pred EEEEEec-C--CC--eEEEEecchhhCCCCCCccEEEecCCCccccceeeEEEEECCC-------------eEEEEEEEe
Confidence 8888753 2 34 367764 222211 101 11111111248999999999742 378888888
Q ss_pred CCCCceEEEEEEeeC--CceeeecC
Q 005279 344 DDDRHDYYAIGTYHE--KNVTWVPD 366 (704)
Q Consensus 344 ~~~~~~~Y~iG~~d~--~~~~f~p~ 366 (704)
.+..+..|+++ |-. -.+.|+|.
T Consensus 207 ~g~~~~rYfrs-~Ts~Sl~GpWt~~ 230 (303)
T cd08987 207 IGSDGGRYFRS-WTATSLDGPWTPL 230 (303)
T ss_pred cCCCCCCeEEE-EEcCCCCCCceec
Confidence 77644457777 332 23466654
|
The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr |
| >cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins | Back alignment and domain information |
|---|
Probab=98.53 E-value=7.9e-07 Score=94.14 Aligned_cols=107 Identities=23% Similarity=0.350 Sum_probs=80.3
Q ss_pred CCCcceEECCEEEEEEeeCCCC----CCCCCcEEEEEEeCCC-cceeec-ccccccCC-CCCCCcEEeeeEEEecCCcEE
Q 005279 133 DPNGPVFYKGWYHLFYQYNPNG----AIWGDIVWGHAVSKDL-IHWYHL-PLAMVADQ-WYDIMGVWTGSATILPDGKLM 205 (704)
Q Consensus 133 DPNG~~y~~G~YHLFYQ~nP~~----~~wG~~~WGHAvS~DL-vhW~~l-p~AL~Pd~-~yD~~Gv~SGSavv~~dG~~~ 205 (704)
+|. +++++|+|||||..+... ...++...|+|+|+|+ -+|+.+ .++|.|.. .||..+++.++++...+|+++
T Consensus 82 ~P~-vi~~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~g~w~~~~~pvl~~~~~~~~~~~~~~p~v~~~~~g~~~ 160 (291)
T cd08994 82 NPT-IKRFDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLDGPWKRSDQPILEPRPGGWDNLITSNPAVTRRPDGSYL 160 (291)
T ss_pred CCe-EEEECCEEEEEEEcccCCcccccCCCCceEEEEEeCCCCCCcEECCCceecCCCCccccccccCCCeEEeCCCCEE
Confidence 574 577899999999976531 1224578999999994 699984 45566644 367788999998765589999
Q ss_pred EEEecccCC---ceeeEEEEEeCCCCCCccceeEeeCCCcee
Q 005279 206 MLYTGSTNE---SVQVQNLAYPADPSDPLLIKWVKYPGNPVL 244 (704)
Q Consensus 206 ~~YTG~~~~---~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl 244 (704)
|+|+|+... ..+.|++|+|.|.. .+|+|...+||+
T Consensus 161 m~y~g~~~~~~~~~~~~gla~s~d~~----g~~~~~~~~~v~ 198 (291)
T cd08994 161 LVYKGGTYNPTKGNRKYGVAIADSPT----GPYTKVSGPPFI 198 (291)
T ss_pred EEEeccccCCCCCcEEEEEEEeCCCC----CCCEECCCCccc
Confidence 999998642 35779999998852 579998766765
|
This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f |
| >cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.1e-06 Score=93.26 Aligned_cols=121 Identities=16% Similarity=0.198 Sum_probs=84.3
Q ss_pred CccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCCCCcEEeeeEEEecCCcEEEEEe
Q 005279 130 WMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYT 209 (704)
Q Consensus 130 WmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YT 209 (704)
..-||. +++.+|.|+|+..-.. + .....-.+|+||+||+..+.++.+. ..++|...+. ..+|+++|+|+
T Consensus 14 ~~~DP~-i~~~~~~yY~~~t~~~----~-~~gi~i~~S~DL~~W~~~g~~~~~~----~~~~WAP~i~-~~~gkyy~yys 82 (280)
T cd09002 14 DYPDPS-ILRDGEDYYMTHSSFK----Y-TPGLVIWHSRDLVNWTPVGPALPEY----EGDVWAPDLC-KYDGRYYIYFP 82 (280)
T ss_pred CCCCCE-EEEECCEEEEEEcchh----c-CCCEEEEECCCcCCceEccccccCC----CCCEEcCeeE-EECCEEEEEEE
Confidence 345995 7888999999754211 1 1246778999999999988777542 3579998875 58999999999
Q ss_pred cccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEee
Q 005279 210 GSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGS 275 (704)
Q Consensus 210 G~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs 275 (704)
.......+.+.+|++.+.. ..|++ |+... .....||.+++ +++|++||+.+.
T Consensus 83 ~~~~~~~~~~~va~ad~p~----Gpw~~----~~~~~-----~~~~IDp~vf~-DddG~~Yl~~~~ 134 (280)
T cd09002 83 AIPEGGNWTNMVIWADSPE----GPWSK----PIDLK-----IGGCIDPGHVV-DEDGNRYLFLSG 134 (280)
T ss_pred eecCCCCceEEEEEECCCC----CCCcC----CEecC-----CCCccCCceEE-cCCCCEEEEECC
Confidence 8764334567888876542 45754 22111 12236999666 678999999863
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs |
| >COG2152 Predicted glycosylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.51 E-value=9.8e-07 Score=93.31 Aligned_cols=146 Identities=21% Similarity=0.284 Sum_probs=109.8
Q ss_pred cceEECCEEEEEEee------CCCCCCCCCcEEEEEEeCCCcc-eeecc-ccccc-CCCCCCCcEEeeeEEEecCCcEEE
Q 005279 136 GPVFYKGWYHLFYQY------NPNGAIWGDIVWGHAVSKDLIH-WYHLP-LAMVA-DQWYDIMGVWTGSATILPDGKLMM 206 (704)
Q Consensus 136 G~~y~~G~YHLFYQ~------nP~~~~wG~~~WGHAvS~DLvh-W~~lp-~AL~P-d~~yD~~Gv~SGSavv~~dG~~~~ 206 (704)
+++++++++||+|+- .+. +--|.+-|.|+|+++ |+-.+ +.+.| ..+++.-||....++ ..+|+++|
T Consensus 35 av~~~~~~~~~l~Rv~~~yye~~~----~~s~l~ia~s~dgi~~~~~e~ep~~~P~~~~~e~~G~EDPRvt-~I~~~y~m 109 (314)
T COG2152 35 AVVLVGGELLLLYRVVEGYYEDHS----SISHLRIARSDDGIGEFEIEPEPTLWPANYPYEIYGIEDPRVT-KIGGRYYM 109 (314)
T ss_pred eeEEECCEEEEEEEEeccccccCc----cceEEEEEecccCCCceecCCcceEecCCCchhhhcccCceEE-EECCEEEE
Confidence 688899999999987 222 346788899999999 98665 56888 557888999999997 57899999
Q ss_pred EEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEe-cCCCeEEEEEeeec-CC--eeE
Q 005279 207 LYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWL-TSEGKWRIAIGSRI-NR--TGI 282 (704)
Q Consensus 207 ~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~-~~~g~w~Mv~Gs~~-~~--~G~ 282 (704)
.|||.+.. .+..++|.++|- .+|+|. .+++. | ++||-. +++ ..+|+|.|+---.. +. .+-
T Consensus 110 tYTa~s~~-g~~~~la~t~~f-----~n~~ri--g~i~~-p------dn~~~~-lfP~~~ngk~~~lhr~~~~~~~~~~n 173 (314)
T COG2152 110 TYTAYSDK-GPRLALAVTKDF-----LNWERI--GAIFP-P------DNKDAA-LFPKKINGKYALLHRPVLGEYGMKGN 173 (314)
T ss_pred EEEecCCC-Ccccchhhhhhh-----hhhhhc--ccccC-C------CCCCce-EeeEEecCcEEEEEeecccccCccCc
Confidence 99998654 377899999984 789996 33332 2 345544 222 35789999865332 22 367
Q ss_pred EEEEEeCCCCCcEEecceec
Q 005279 283 TFVYDTKDFINYELLRGVLH 302 (704)
Q Consensus 283 ~llY~S~Dl~~W~~~~~l~~ 302 (704)
+.+-.|.|+.+|.....++.
T Consensus 174 iwia~S~dl~~w~~~~~~l~ 193 (314)
T COG2152 174 IWIAFSPDLEHWGIHRKLLG 193 (314)
T ss_pred eEEEEcCCccCCCccceeec
Confidence 88999999999998665554
|
|
| >cd08995 GH32_Aec43_like Glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Probab=98.51 E-value=2e-06 Score=90.51 Aligned_cols=156 Identities=17% Similarity=0.141 Sum_probs=99.2
Q ss_pred CCCCCcccccccccceeecCCCC-----ccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeeccc--cc
Q 005279 108 YPWTNNMLSWQRTAFHFQPQKNW-----MNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPL--AM 180 (704)
Q Consensus 108 ~~~~~~~~~w~Rp~~Hf~P~~gW-----mNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~--AL 180 (704)
...+..+..|.+...-+.|+.++ +-.|+ .++.+|+|||||.-+... ..+....++|+|+|+++|+..+. .+
T Consensus 34 ha~S~Dlv~W~~~~~al~~~~~~~d~~g~~sgs-~~~~~g~~~l~YTg~~~~-~~~~~~i~~A~S~D~~~w~k~~~~pv~ 111 (280)
T cd08995 34 LLTTKDLVNYEDHGEAIPRGGDEDDDDAIGTGS-VIKGEGTYHAFYTGHNLD-GKPKQVVMHATSDDLITWTKDPEFILI 111 (280)
T ss_pred EEEccCcCccEECcceecCCCCcccccCceEeE-EEeeCCEEEEEEEEECCC-CCCcEEEEEEECCCCCccEECCCCeec
Confidence 34455677887766666664332 22343 466799999999865322 11346789999999999998752 23
Q ss_pred ccCCCCCCCcEEeeeEEEec-CCcEEEEEecccC----CceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCc
Q 005279 181 VADQWYDIMGVWTGSATILP-DGKLMMLYTGSTN----ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDF 255 (704)
Q Consensus 181 ~Pd~~yD~~Gv~SGSavv~~-dG~~~~~YTG~~~----~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~f 255 (704)
.+...++...+-...++.+. +|+++|+|.+... .....+.++.|.| |.+|+.. .+++.+..+ ..+
T Consensus 112 ~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~~g~i~~~~S~D-----l~~W~~~--~~~~~~~~~---~~~ 181 (280)
T cd08995 112 ADGEGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRRGCIALFTSKD-----LKNWEYE--EPFYAPGLY---FMP 181 (280)
T ss_pred CCccccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCCCeEEEEEEeCC-----cCcceec--CceecCCCc---cee
Confidence 32333443444466665543 5999999987542 2234567788887 4899875 455543211 234
Q ss_pred cCCeeEEecCCCeEEEEEeeec
Q 005279 256 RDPTTAWLTSEGKWRIAIGSRI 277 (704)
Q Consensus 256 RDP~Vvw~~~~g~w~Mv~Gs~~ 277 (704)
--|.+ + +.+|+|+|+++.+.
T Consensus 182 E~P~l-~-~~~g~~~L~~s~~~ 201 (280)
T cd08995 182 ECPDL-F-KMGDWWYLVYSEFS 201 (280)
T ss_pred ecceE-E-EECCEEEEEEEecc
Confidence 56874 4 46899999998753
|
This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a |
| >cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F | Back alignment and domain information |
|---|
Probab=98.45 E-value=4.9e-06 Score=85.96 Aligned_cols=155 Identities=15% Similarity=0.148 Sum_probs=95.7
Q ss_pred CCCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCCCCcEEeeeEEEecCCcEEEE
Q 005279 128 KNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMML 207 (704)
Q Consensus 128 ~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~ 207 (704)
.+-+-+|. +++++|+|||||..+..+ ......+.|+|+|+.+|........+ . ....++..++++.++||+++|+
T Consensus 56 ~~~~waP~-v~~~~g~yyl~y~~~~~~--~~~~~i~~a~s~d~~g~~~~~~~~~~-~-~~~~~~iDp~vf~d~dg~~yl~ 130 (271)
T cd08978 56 SGGLWAPE-VIYYEGKYYLYYSVSDFD--YNGSGIGVATSEDPTGPFEDKVIRPP-T-SNNGNSIDPTVFKDDDGKYYLY 130 (271)
T ss_pred CCceeCCe-EEEECCEEEEEEEcccCC--CCcccEEEEECCCCCCCccccccCcC-c-cCCCCccCcceEEcCCCCEEEE
Confidence 45677886 788999999999987642 23467899999999999765321111 1 1234678899887777999999
Q ss_pred EecccCC-ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecC--CeeEEE
Q 005279 208 YTGSTNE-SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRIN--RTGITF 284 (704)
Q Consensus 208 YTG~~~~-~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~--~~G~~l 284 (704)
|.+.... ....+.++.+.+. ..|.. ..+++..........+-.|.+ + +.+|+|||++.+... ..-.+.
T Consensus 131 ~~~~~~~~~~~~i~~~~l~~~-----~~~~~--~~~~~~~~~~~~~~~~EgP~~-~-k~~g~yyl~ys~~~~~~~~y~~~ 201 (271)
T cd08978 131 YGSGDPGAGFGGIYISELTDD-----LTKPT--GPPVLSASSGNNNAVTEGPTI-F-KKNGYYYLTYSANGTGDYGYNIG 201 (271)
T ss_pred EecccCCCCCCcEEEEEECcc-----ccccc--CCceeeeeeccCCCceEccEE-E-EECCEEEEEEEeCCCCCCCceEE
Confidence 9876421 1234566666653 22222 233321111111223457984 4 457999999876532 233666
Q ss_pred EEEeCCCC-CcEE
Q 005279 285 VYDTKDFI-NYEL 296 (704)
Q Consensus 285 lY~S~Dl~-~W~~ 296 (704)
+.+|++.. -|+.
T Consensus 202 ~~~s~~~~Gp~~~ 214 (271)
T cd08978 202 YATSDSIDGPYVK 214 (271)
T ss_pred EEECCCCCCCcCc
Confidence 77887763 3444
|
This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma |
| >cd08982 GH43_3 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.42 E-value=9.8e-06 Score=86.85 Aligned_cols=108 Identities=24% Similarity=0.365 Sum_probs=72.7
Q ss_pred cCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCCCCcEEeeeEEEecCCcEEEEEecc
Q 005279 132 NDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGS 211 (704)
Q Consensus 132 NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~ 211 (704)
-||. +++++|+|+||--.. + ++.+|+||+||+..+.++. ..++|..++. ..+|++++.|+..
T Consensus 4 ~DP~-i~~~~g~YY~~~T~~------~----~i~~S~DL~~W~~~g~~~~------~~~~WAP~i~-~~~g~~Y~~~~~~ 65 (295)
T cd08982 4 ADPV-VILFKGEYYLFASMS------G----GYWHSSDLIDWDFIPTNSL------PDEGYAPAVF-VYDGTLYYTASTY 65 (295)
T ss_pred CCCe-EEEECCEEEEEEeCC------C----CeEECCCcCCceECCcccC------CCCcCcCEEE-EECCEEEEEEeCC
Confidence 5996 678899999885431 1 3689999999999987763 4579999986 4689876666532
Q ss_pred cCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeee
Q 005279 212 TNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSR 276 (704)
Q Consensus 212 ~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~ 276 (704)
.+.+|+++|.- .--|... .+ . ......||.+++ ++||++||+.|+.
T Consensus 66 ------~~~v~~s~~p~---gp~w~~~--~~----~---~~~~~IDp~vf~-DdDGk~Yl~~g~~ 111 (295)
T cd08982 66 ------NSRIYKTADPL---SGPWEEV--DK----S---FPPGLADPALFI-DDDGRLYLYYGCS 111 (295)
T ss_pred ------CceEEEeCCCC---CCCcccc--cc----c---cCCCccCCceEE-CCCCCEEEEEecC
Confidence 13477776642 2235442 01 0 112347999655 6789999999753
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08983 GH43_4 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.39 E-value=2.2e-06 Score=90.82 Aligned_cols=91 Identities=27% Similarity=0.394 Sum_probs=64.9
Q ss_pred CCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec-----CCeeEEEEEEeCCCCCcEEecceeccCCCCC-ceee
Q 005279 239 PGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI-----NRTGITFVYDTKDFINYELLRGVLHGVPNTG-MWEC 312 (704)
Q Consensus 239 ~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~-----~~~G~~llY~S~Dl~~W~~~~~l~~~~~~~g-mWEC 312 (704)
.++|||.+.. +...+|||+|++..++|+|||+..... .....+.+|+|+||++|+..+.++...+..+ +| |
T Consensus 4 ~~~pvl~~~~--g~~~~rDP~I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~~~~~~W-A 80 (276)
T cd08983 4 NGNPVLTSTA--GTKGLRDPFILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPPNAGNTW-A 80 (276)
T ss_pred CCceEEeCCc--CCCCccCCeEEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCCCcCcEe-C
Confidence 3689998643 357899999877546899999876542 1123578999999999999877653323333 78 9
Q ss_pred eeeEEcCCCCCCCcccccCCCCcEEEEEEeeCC
Q 005279 313 VDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDD 345 (704)
Q Consensus 313 Pdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~ 345 (704)
|+++..+.. .+|+|.++...
T Consensus 81 Pev~~d~~~-------------g~y~~~~s~~~ 100 (276)
T cd08983 81 PEAFWDAER-------------GQYVVYWSSRL 100 (276)
T ss_pred ccceEcCCC-------------CeEEEEEeccc
Confidence 999988642 27888777643
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08999 GH43_ABN_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.6e-05 Score=83.59 Aligned_cols=173 Identities=17% Similarity=0.194 Sum_probs=102.3
Q ss_pred CcccccccccceeecCCCC-----ccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCc-ceeeccccc-c-cC
Q 005279 112 NNMLSWQRTAFHFQPQKNW-----MNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLI-HWYHLPLAM-V-AD 183 (704)
Q Consensus 112 ~~~~~w~Rp~~Hf~P~~gW-----mNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLv-hW~~lp~AL-~-Pd 183 (704)
..+..|.+...-+.+...| +..|. +++++|+|||||.-+-.+ ..+...|+|+|+|.. .|+..+..+ . +.
T Consensus 38 ~Dl~~W~~~g~~l~~~~~~~~~~~~waP~-v~~~~g~y~~~y~~~~~~--~~~~~i~~a~s~~p~g~~~~~~~~~~~~~~ 114 (287)
T cd08999 38 TDLVNWTYLGDAFPKLPRWWTGGDFWAPD-VSYVNGKYVLYYSARDKG--SGGQCIGVATADSPLGPFTDHGKPPLCCPE 114 (287)
T ss_pred CCCCCcEECCcccCCCCCcccCCCccCce-EEEECCEEEEEEEeecCC--CCCEEEEEEECCCCCCCCccCCcceEecCC
Confidence 3455676554333333332 33453 678899999999876543 235678999999965 898765332 2 22
Q ss_pred CCCCCCcEEeeeEEEecCCcEEEEEecccCC--ceeeEEEE-EeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCee
Q 005279 184 QWYDIMGVWTGSATILPDGKLMMLYTGSTNE--SVQVQNLA-YPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTT 260 (704)
Q Consensus 184 ~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~--~~q~q~lA-~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~V 260 (704)
+..++...+++.++||+++|+|.+.... ..+.+.++ .+.| +.+|+... ..++.+........+--|.+
T Consensus 115 ---~~~~~~Dp~v~~d~dG~~Yl~~~~~~~~~~~~~~i~~~~ls~d-----~~~~~~~~-~~i~~~~~~~~~~~~EgP~i 185 (287)
T cd08999 115 ---GEGGAIDPSFFTDTDGKRYLVWKSDGNSIGKPTPIYLQELSAD-----GLTLTGEP-VRLLRNDEDWEGPLVEAPYL 185 (287)
T ss_pred ---CCCCccCCCeEECCCCCEEEEEeccCCCCCCCceEEEEEeCCC-----CccccCCc-EeeecccccccCCceEeeEE
Confidence 2345677888777799999999764321 11224444 4444 25665421 22333222222233456884
Q ss_pred EEecCCCeEEEEEeeec--CC--eeEEEEEEeCCCC-CcEEec
Q 005279 261 AWLTSEGKWRIAIGSRI--NR--TGITFVYDTKDFI-NYELLR 298 (704)
Q Consensus 261 vw~~~~g~w~Mv~Gs~~--~~--~G~~llY~S~Dl~-~W~~~~ 298 (704)
+ +.+|+|||++.+.. .. .=.+.+++|+|+. .|+..+
T Consensus 186 -~-k~~g~yyl~~S~~~~~~~~~~y~i~~~~s~~~~Gpw~~~~ 226 (287)
T cd08999 186 -V-KRGGYYYLFYSAGGCCSGASTYAVGVARSKSLLGPYVKAP 226 (287)
T ss_pred -E-EECCEEEEEEEcCCccCCCCCEEEEEEEeCCCcCCcCCCC
Confidence 4 45899999997652 11 2256678999876 777643
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68 | Back alignment and domain information |
|---|
Probab=98.28 E-value=2e-05 Score=81.77 Aligned_cols=156 Identities=16% Similarity=0.148 Sum_probs=96.8
Q ss_pred CCccCCCcceEEC-CEEEEEEeeCCCCCCCCCcEEEEEEeCCCcc-eeeccc-ccccCC--CCCCCcEEeeeEEEecCCc
Q 005279 129 NWMNDPNGPVFYK-GWYHLFYQYNPNGAIWGDIVWGHAVSKDLIH-WYHLPL-AMVADQ--WYDIMGVWTGSATILPDGK 203 (704)
Q Consensus 129 gWmNDPNG~~y~~-G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvh-W~~lp~-AL~Pd~--~yD~~Gv~SGSavv~~dG~ 203 (704)
+-+-.|. +++++ |+|+|||.-... ..+....+.|+|+|+.. |+.... .+.+.. ..+...+..++++.++||+
T Consensus 58 ~~~wap~-v~~~~~g~~~l~yt~~~~--~~~~~~i~~a~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~d~dG~ 134 (286)
T cd08772 58 GGIWAPS-IVYIENGKFYLYYTDVSF--TKNQQTIGVATAEDGNGPWTDYIGGPVLPDNPPAADVSNFRDPFVFEDDDGK 134 (286)
T ss_pred CcEecce-EEEcCCCCEEEEEEeecC--CCCceeEEEEEcCCCCCCCccccccccccCCCCccccccccCCeEEEcCCCC
Confidence 3455665 56777 999999987543 23456789999999975 554321 122221 2233467888887776699
Q ss_pred EEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec----CC
Q 005279 204 LMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI----NR 279 (704)
Q Consensus 204 ~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~----~~ 279 (704)
++|+|.+........+.+|.++|. .+|++.+..+++.... ....+--|.++ +.+|+|||++.+.. +.
T Consensus 135 ~y~~~~~~~~~~~~~i~~~~s~d~-----~~w~~~~~~~~~~~~~--~~~~~E~P~~~--~~~g~~yL~~s~~~~~~~~~ 205 (286)
T cd08772 135 WYLVFGSGDHHNFGGIFLYESDDD-----TTWKKGSAELLISEGE--GGKQIEGPGLL--KKNGKYYLFYSINGTGRVDS 205 (286)
T ss_pred EEEEEccccCCCCCeEEEEEcCCC-----CCcccccceeeEeecc--CCCceeccEEE--EECCEEEEEEEcCCCcCCCC
Confidence 999998765433456789999884 7888753222222221 12345679854 45799999998753 12
Q ss_pred eeEEEEEEeCC-CCCcEE
Q 005279 280 TGITFVYDTKD-FINYEL 296 (704)
Q Consensus 280 ~G~~llY~S~D-l~~W~~ 296 (704)
.-.+.+++|++ +-.|+.
T Consensus 206 ~y~~~~~~~~~~~g~~~~ 223 (286)
T cd08772 206 TYSIGYARSESDTGPYVP 223 (286)
T ss_pred CcceEEEEccCCCCCccc
Confidence 23455566654 334443
|
Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32 |
| >PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety | Back alignment and domain information |
|---|
Probab=98.22 E-value=5.8e-06 Score=89.39 Aligned_cols=108 Identities=17% Similarity=0.257 Sum_probs=81.0
Q ss_pred CCCcEEeeeEEEecCC-cEEEEEecccCCcee-eEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEec
Q 005279 187 DIMGVWTGSATILPDG-KLMMLYTGSTNESVQ-VQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLT 264 (704)
Q Consensus 187 D~~Gv~SGSavv~~dG-~~~~~YTG~~~~~~q-~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~ 264 (704)
....||-..|++..++ +++|+|.+....... .+++|.|.|+ ++|++. .+|||.|...++....-||.|+.
T Consensus 28 ~~~~vfNpgai~~~~~~R~~l~yr~~~~~~~~~~iglA~S~DG-----i~f~~~-~~pil~P~~~~e~~GvEDPRVt~-- 99 (312)
T PF04041_consen 28 EPNAVFNPGAIVFDGGLRVYLLYRAYGSDIGSSRIGLARSDDG-----IHFERD-PEPILYPDTDYEEWGVEDPRVTK-- 99 (312)
T ss_dssp TSSEEEEEEEEEETTE--EEEEEEEEESSSSEEEEEEEEESSS-----SS-EE--SS-SBEE-SSTTHTEEEEEEEEE--
T ss_pred CcceEEcCcEEEECCeeEEEEEEEeECCCCceeEEEEEEccCC-----cCceEC-CCCEEccCCCCcccCccceeEEE--
Confidence 3567999999754444 289999887655444 7999999996 899886 58999876556556778999875
Q ss_pred CCCeEEEEEeeecCCeeEEEEEEeCCCCCcEEecceec
Q 005279 265 SEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLH 302 (704)
Q Consensus 265 ~~g~w~Mv~Gs~~~~~G~~llY~S~Dl~~W~~~~~l~~ 302 (704)
.+++|+|++.+.......+.+.+|+|+++|+..+..+.
T Consensus 100 i~d~yymtYta~~~~~~~~~la~s~D~~~~~r~g~~~~ 137 (312)
T PF04041_consen 100 IDDTYYMTYTAYSGKGPRIGLATSKDFKHWERHGKIFP 137 (312)
T ss_dssp ETTEEEEEEEEEESSSEEEEEEEESSSSSEEEEECTTT
T ss_pred ECCEEEEEEEEecCCCcccceEEccchHhhEEeccccC
Confidence 46899999988765556777889999999999886654
|
On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B. |
| >cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.20 E-value=5.2e-05 Score=80.38 Aligned_cols=170 Identities=13% Similarity=0.144 Sum_probs=95.5
Q ss_pred ccccccccceeecCC-----CCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCc-ceeecccccccCCCCC
Q 005279 114 MLSWQRTAFHFQPQK-----NWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLI-HWYHLPLAMVADQWYD 187 (704)
Q Consensus 114 ~~~w~Rp~~Hf~P~~-----gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLv-hW~~lp~AL~Pd~~yD 187 (704)
|..|.+...-+.++. +.+-.|. +++.+|+|||||...... -.....++|+|+|.. .|+..+..+.+..
T Consensus 33 l~~W~~~~~~~~~~~~~~~~~~~waP~-v~~~~g~yyl~ys~~~~~--~~~~~i~~a~s~~p~gp~~~~~~~~~~~~--- 106 (294)
T cd08991 33 LVDWKLHGGALLALDDDWGRRGFWAPE-VYYYNGKFYMYYSANDRD--EKTEHIGVAVSDSPLGPFRDIKKPPIDFE--- 106 (294)
T ss_pred CCCceECCccccCCCCCccCCcEEccE-EEEECCEEEEEEEeccCC--CCcceEEEEEeCCCCCCCCcCCCCcccCC---
Confidence 445544443343322 2344675 788999999999876432 235678999999987 6877654333322
Q ss_pred CCcEEeeeEEEecCCcEEEEEecccCCc--eeeEEEEEeCCCCCCccceeEeeCC---CceecC-------CCC----CC
Q 005279 188 IMGVWTGSATILPDGKLMMLYTGSTNES--VQVQNLAYPADPSDPLLIKWVKYPG---NPVLVP-------PPG----IG 251 (704)
Q Consensus 188 ~~Gv~SGSavv~~dG~~~~~YTG~~~~~--~q~q~lA~S~D~~D~~l~~W~K~~~---nPVl~~-------p~g----~~ 251 (704)
.....++++.++||+++|+|+...... ...+..+.+.|. .+|..... .|+..+ +.. .+
T Consensus 107 -~~~iD~~vf~d~dG~~yl~~~~~~~~~~~~~i~~~~l~~d~-----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 180 (294)
T cd08991 107 -PKSIDAHPFIDDDGKPYLYYSRNNYGNRVSDIYGTELVDDK-----LSIKTELVGPPIPVSAPGIDEIFERWRFGEGKD 180 (294)
T ss_pred -CcccCCceEECCCCCEEEEEEecCCCCcccceEEEEEccce-----eeeccceeecccccccccccccccccccccccc
Confidence 245678888777899999998654321 123344555553 45542111 111111 000 00
Q ss_pred CcCccCCeeEEecCCCeEEEEEeeec-CCee-EEEEEEeCC-CCCcEEe
Q 005279 252 AKDFRDPTTAWLTSEGKWRIAIGSRI-NRTG-ITFVYDTKD-FINYELL 297 (704)
Q Consensus 252 ~~~fRDP~Vvw~~~~g~w~Mv~Gs~~-~~~G-~~llY~S~D-l~~W~~~ 297 (704)
..-.--|.+ . +.+|+|||++.+.. .... .+.+.+|++ +-.|+..
T Consensus 181 ~~~~EgP~~-~-k~~g~yyl~ys~~~~~~~~y~~~~a~s~~~~gp~~~~ 227 (294)
T cd08991 181 WRTNEGPTV-L-KHNGRYYLTYSANHYENEDYGVGYATADSPLGPWTKY 227 (294)
T ss_pred CceeeCcEE-E-EECCEEEEEEECCCCCCCCceEEEEEcCCCCCCcEec
Confidence 111234764 3 46799999987542 1111 355567776 4567763
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase | Back alignment and domain information |
|---|
Probab=98.20 E-value=4.3e-05 Score=80.41 Aligned_cols=149 Identities=13% Similarity=0.082 Sum_probs=90.3
Q ss_pred CCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCc-ceeecccc-cccCCCCCCCcEEeeeEEEecCCcEEE
Q 005279 129 NWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLI-HWYHLPLA-MVADQWYDIMGVWTGSATILPDGKLMM 206 (704)
Q Consensus 129 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLv-hW~~lp~A-L~Pd~~yD~~Gv~SGSavv~~dG~~~~ 206 (704)
+-+--|. +++++|+|||||..... .+....|+|+|+|.. .|+..... +.+ ...+......+++.++.||+++|
T Consensus 62 ~~~wAP~-i~~~~g~yy~yy~~~~~---~~~~~igva~s~~p~Gpw~~~~~~~~~~-~~~~~~~~iDp~vf~d~dG~~yl 136 (274)
T cd08990 62 GQAWAPD-VVEKNGKYYLYFPARDK---DGGFAIGVAVSDSPAGPFKDAGGPILIT-TPSGGWYSIDPAVFIDDDGQAYL 136 (274)
T ss_pred CCcCcCe-EEEECCEEEEEEEeecC---CCceEEEEEEeCCCCCCCCCCCCccccc-cCCCCCCccCCcEEECCCCCEEE
Confidence 4455575 78899999999987643 235678999999976 79987543 222 22233456788887777899999
Q ss_pred EEecccCCceeeEEEEE-eCCCCCCccceeEeeCCCceecCCC---CCCCcCccCCeeEEecCCCeEEEEEeeecCCeeE
Q 005279 207 LYTGSTNESVQVQNLAY-PADPSDPLLIKWVKYPGNPVLVPPP---GIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGI 282 (704)
Q Consensus 207 ~YTG~~~~~~q~q~lA~-S~D~~D~~l~~W~K~~~nPVl~~p~---g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~ 282 (704)
+|.+. +.+.++. +.| +.+|+.. ..+|..+. .....-+-=|.+ + +.+|+|||++.+.. ...
T Consensus 137 ~~~~~-----~~~~~~~l~~d-----~~~~~~~--~~~i~~~~~~~~~~~~~~EgP~i-~-k~~G~YYl~yS~~~--~~~ 200 (274)
T cd08990 137 YWGGG-----LGLRVAKLKPD-----MLSLKGE--PVEIVITDGAGDELRRFFEAPWV-H-KRNGTYYLSYSTGD--PEE 200 (274)
T ss_pred EECCc-----CCEEEEEeCcc-----ccccCCC--cEEEEeccccCCCCCCcccceeE-E-EECCEEEEEEECCC--CcE
Confidence 99864 2234443 334 3667542 22332111 001111234774 4 56899999988643 344
Q ss_pred EEEEEeCCCC-CcEEec
Q 005279 283 TFVYDTKDFI-NYELLR 298 (704)
Q Consensus 283 ~llY~S~Dl~-~W~~~~ 298 (704)
+.+.+|+++. -|+..+
T Consensus 201 ~~~a~s~~p~GP~~~~g 217 (274)
T cd08990 201 IAYATSDSPLGPFTYRG 217 (274)
T ss_pred EEEEEcCCCCCCcccCc
Confidence 5555777754 354433
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of |
| >cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases | Back alignment and domain information |
|---|
Probab=98.18 E-value=2e-05 Score=83.73 Aligned_cols=157 Identities=17% Similarity=0.167 Sum_probs=99.5
Q ss_pred CCCCCcccccccccceeecCCCCccCCCc-----ceEEC-CEEEEEEeeCCCCCCCCCcEEEEEEeC-CCcceeecccc-
Q 005279 108 YPWTNNMLSWQRTAFHFQPQKNWMNDPNG-----PVFYK-GWYHLFYQYNPNGAIWGDIVWGHAVSK-DLIHWYHLPLA- 179 (704)
Q Consensus 108 ~~~~~~~~~w~Rp~~Hf~P~~gWmNDPNG-----~~y~~-G~YHLFYQ~nP~~~~wG~~~WGHAvS~-DLvhW~~lp~A- 179 (704)
+..+..++.|.+...=+.|...+ |.+| .+..+ |+|+|||.-+......+...-++|+|+ |+++|+..+..
T Consensus 36 ha~S~Dlv~W~~~~~al~p~~~~--d~~g~~sGsav~~~~g~~~~~YTg~~~~~~~~~~~~~lA~S~ddg~~w~k~~~~~ 113 (298)
T cd08996 36 HATSKDLVHWEHLPVALAPDDPY--DSGGCFSGSAVVDDNGKLVLFYTGNVKLDGGRRQTQCLAYSTDDGRTFTKYEGNP 113 (298)
T ss_pred EEEecCccceeECCcccCCCCcc--cCCeEEeCeEEEcCCCcEEEEEeceeCCCCCceEEEEEEEEcCCCCEEEECCCCc
Confidence 44556678887655445553222 3333 24456 999999986543211235677899999 89999987532
Q ss_pred cccCCCCCCCcEEeeeEEEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCe
Q 005279 180 MVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPT 259 (704)
Q Consensus 180 L~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~ 259 (704)
+.+....+..+.-...++. .+|+++|+|++...+....+.++.|.|. ++|++. .+++..... ....+--|.
T Consensus 114 ~~~~~~~~~~~~RDP~V~~-~~g~~~m~~g~~~~~~~~~i~ly~S~Dl-----~~W~~~--~~~~~~~~~-~~~~~EcP~ 184 (298)
T cd08996 114 VIPPPDGYTTHFRDPKVFW-HDGKWYMVLGAGTEDGTGRILLYRSDDL-----KNWEYL--GELLTSLGD-FGYMWECPD 184 (298)
T ss_pred eEcCCCCCCCcccCCeEEe-ECCEEEEEEEEEecCCCcEEEEEECCCC-----CCCEEc--ceecccCCC-ccceEeCCc
Confidence 2211222344566777754 5699999999876544456788999884 899985 344321111 123466788
Q ss_pred eEEecCC--CeEEEEEeeec
Q 005279 260 TAWLTSE--GKWRIAIGSRI 277 (704)
Q Consensus 260 Vvw~~~~--g~w~Mv~Gs~~ 277 (704)
+ + +-+ ++|+|+++...
T Consensus 185 l-~-~l~~~~k~vL~~s~~~ 202 (298)
T cd08996 185 L-F-PLDVEGKWVLIFSPQG 202 (298)
T ss_pred E-E-EECCCCeEEEEECCCC
Confidence 4 4 346 99999998763
|
Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal |
| >cd08986 GH43_7 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.5e-05 Score=84.01 Aligned_cols=121 Identities=11% Similarity=0.033 Sum_probs=70.9
Q ss_pred ccCCeeEEecCCCeEEEEEeeecC---------CeeEEEEEEeCCCCCcEEecceeccCC--------------CCCcee
Q 005279 255 FRDPTTAWLTSEGKWRIAIGSRIN---------RTGITFVYDTKDFINYELLRGVLHGVP--------------NTGMWE 311 (704)
Q Consensus 255 fRDP~Vvw~~~~g~w~Mv~Gs~~~---------~~G~~llY~S~Dl~~W~~~~~l~~~~~--------------~~gmWE 311 (704)
||||+|++ ..+|.|||+..+... ..+.+.+|+|+||++|++.+.++...+ ..+..+
T Consensus 2 ~rDP~v~~-~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~W 80 (269)
T cd08986 2 IRDTYVTL-GPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAVW 80 (269)
T ss_pred CcCCeEEe-cCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCcC
Confidence 79999665 567889888765421 124577999999999999887764321 122334
Q ss_pred eeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCC--CceEEEEEEeeCCceeeecCCCccccccceeeccCCCccccee
Q 005279 312 CVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDD--RHDYYAIGTYHEKNVTWVPDNPEIDVGIGIRYDYGLFYASKTF 389 (704)
Q Consensus 312 CPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~--~~~~Y~iG~~d~~~~~f~p~~~~~D~g~g~~lD~G~fYA~qtf 389 (704)
||+++.+++ |++|.++.... ......+..=|...+.|+..... + .+. .-.-+..|
T Consensus 81 AP~v~~~~g---------------~yyl~~s~~~~~~~~~~i~va~a~~p~Gp~~~~~~~-~-----~~~--~~iD~~~f 137 (269)
T cd08986 81 APELHYIKG---------------RWYLVACMNNPGYGGSSILLSTSGKIEGPYKHITGN-K-----PLF--PGIDPSLF 137 (269)
T ss_pred CceEEEECC---------------EEEEEEEccCCCCCceEEEEEeCCCCCCCcEeccCC-C-----CCC--CccCCceE
Confidence 999998862 78887776532 11223333323223456532110 0 000 12346778
Q ss_pred ecCCCCcEEEE
Q 005279 390 YDQNKKRRVLW 400 (704)
Q Consensus 390 ~d~~~gRrIl~ 400 (704)
.|. +|+..|+
T Consensus 138 ~D~-DG~~Yl~ 147 (269)
T cd08986 138 EDD-DGKVYLV 147 (269)
T ss_pred EcC-CCCEEEE
Confidence 885 6766654
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08998 GH43_ABN_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.00018 Score=76.25 Aligned_cols=149 Identities=17% Similarity=0.170 Sum_probs=87.6
Q ss_pred CccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCC--cceeecccccccCCCCCCCcEEeeeEEEecCCcEEEE
Q 005279 130 WMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDL--IHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMML 207 (704)
Q Consensus 130 WmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DL--vhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~ 207 (704)
-+-.|. +++.+|+|||||..+..+. ++...++|+|+|+ -.|+..++.+.++..++...+..+++++++||+++|+
T Consensus 57 ~~wAP~-v~~~~g~yyl~ys~~~~~~--~~~~i~va~s~~~~~gpw~~~~~v~~~~~~~~~~~~iDp~vf~d~dG~~Yl~ 133 (288)
T cd08998 57 NLWAPD-VIYLNGKYYLYYSVSTFGS--NRSAIGLATSDTLPDGPWTDHGIVIESGPGRDDPNAIDPNVFYDEDGKLWLS 133 (288)
T ss_pred CccCCe-EEEECCEEEEEEEEEeCCC--CceEEEEEEeCCCCCCCCEEcceeeecCCCCCCcccccCCEEEcCCCCEEEE
Confidence 344564 6788999999998764331 3456799999998 7999877555554332334567888887779999999
Q ss_pred EecccCCceeeEEEEEe-CCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec-C---Cee-
Q 005279 208 YTGSTNESVQVQNLAYP-ADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI-N---RTG- 281 (704)
Q Consensus 208 YTG~~~~~~q~q~lA~S-~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~-~---~~G- 281 (704)
|..... .+.++.. .|.+.+ ..|... ...++..+.. ..-.-.|++ + +.+|+|||++.+.. . ..+
T Consensus 134 ~~~~~~----~i~~~~l~~~~~~~--~~~~~~-~~~i~~~~~~--~~~~Egp~~-~-k~~g~YYl~~S~~~~~~~~~~~y 202 (288)
T cd08998 134 FGSFWG----GIFLVELDPKTGKP--LYPGGY-GYNIAGRPRG--HGAIEAPYI-I-YRGGYYYLFVSYGGCCAGEDSTY 202 (288)
T ss_pred eeeccC----CEEEEEeCcccCCc--cCCCCc-ceEEeccCCC--CCceeeeEE-E-EeCCEEEEEEEcchhcCCCCCce
Confidence 975321 1233332 222221 222110 0112222211 112347884 4 46899999886432 1 112
Q ss_pred EEEEEEeCCCC
Q 005279 282 ITFVYDTKDFI 292 (704)
Q Consensus 282 ~~llY~S~Dl~ 292 (704)
++.+++|+++.
T Consensus 203 ~v~~~~s~~~~ 213 (288)
T cd08998 203 NIRVGRSKSIT 213 (288)
T ss_pred EEEEEEcCCCC
Confidence 56788888753
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.00015 Score=75.95 Aligned_cols=171 Identities=14% Similarity=0.154 Sum_probs=101.2
Q ss_pred CcccccccccceeecCCCCccCCCc------ceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCc-ceeecccccccCC
Q 005279 112 NNMLSWQRTAFHFQPQKNWMNDPNG------PVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLI-HWYHLPLAMVADQ 184 (704)
Q Consensus 112 ~~~~~w~Rp~~Hf~P~~gWmNDPNG------~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLv-hW~~lp~AL~Pd~ 184 (704)
..|..|......+.+...+....++ +++.+|+|||||...... .....+.|+|++.. .|+.......+
T Consensus 41 ~DL~~W~~~g~~~~~~~~~~~~~~~~~WAP~i~~~~g~yy~y~~~~~~~---~~~~~~va~a~~~~Gp~~~~~~~~~~-- 115 (286)
T PF04616_consen 41 KDLVNWTDAGNVLPPPPDWDWANNGNIWAPEIHYINGKYYMYYSDSGGD---AGSGIGVATADSPDGPWTDPGKIPIP-- 115 (286)
T ss_dssp SSSSSEEEEEECESSTTTTSTTTSETTEEEEEEEETTEEEEEEEEESTS---TTEEEEEEEESSTTS-EEEEEEEEEE--
T ss_pred CCCcccccceeeecccccccccccccccCCeEEEcCCeEEEEEEccCCC---CCcceeEEEeCCcccccccccceeec--
Confidence 4466787777677665444422222 677899999999922111 23558899999986 89987654433
Q ss_pred CCCCCcEEeeeEEEecCCcEEEEEecccCC-ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEe
Q 005279 185 WYDIMGVWTGSATILPDGKLMMLYTGSTNE-SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWL 263 (704)
Q Consensus 185 ~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~-~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~ 263 (704)
...+..+++++++||+.+|+|.+.... ..+.+.+|...+.. .++.......+..........-.--|++ +
T Consensus 116 ---~~~~iD~~vf~d~dG~~Yl~~~~~~~~~~~~~i~~~~l~~d~----~~~~~~~~~~~~~~~~~~~~~~~Egp~~-~- 186 (286)
T PF04616_consen 116 ---GGNSIDPSVFVDDDGKYYLYYGSWDNGDPGGGIYIAELDPDG----TSLTGEPVVVIFPGDEGWDGGVVEGPFV-F- 186 (286)
T ss_dssp ---SSSSSSEEEEEETTSEEEEEEEESTTTSSEEEEEEEEEETTT----SSEEEEECEEEEEESGSSTTTBEEEEEE-E-
T ss_pred ---cccccCceEEEecCCCcEEeCcccCCCccceeEEeecccCcc----ccccCcccccccccccccCCccccceEE-E-
Confidence 234567888888889999999986543 23445555544321 3444322122222111111122234774 4
Q ss_pred cCCCeEEEEEeeec-CCeeEEEEEEeCCCCC-cEE
Q 005279 264 TSEGKWRIAIGSRI-NRTGITFVYDTKDFIN-YEL 296 (704)
Q Consensus 264 ~~~g~w~Mv~Gs~~-~~~G~~llY~S~Dl~~-W~~ 296 (704)
+.+|+|||++.... ...-.+.+++|+|+.. |+.
T Consensus 187 k~~g~yYl~~s~~~~~~~y~v~~~~s~~~~gp~~~ 221 (286)
T PF04616_consen 187 KHGGKYYLFYSAGGTGSPYQVGYARSDSPLGPWEW 221 (286)
T ss_dssp EETTEEEEEEEESGSSTTTEEEEEEESSTTSGGEE
T ss_pred EcCCCEEEEEeccCCCCCceEEEeeccCCCCceee
Confidence 46899999988653 2223566789999765 443
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B .... |
| >TIGR01322 scrB_fam sucrose-6-phosphate hydrolase | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00022 Score=80.70 Aligned_cols=157 Identities=14% Similarity=0.168 Sum_probs=93.6
Q ss_pred CCCCCcccccccccceeecCCCCc----cCCCcceEECCEEEEEEeeCCCCCCCC-CcEEEEEEeCCCcceeecc-cccc
Q 005279 108 YPWTNNMLSWQRTAFHFQPQKNWM----NDPNGPVFYKGWYHLFYQYNPNGAIWG-DIVWGHAVSKDLIHWYHLP-LAMV 181 (704)
Q Consensus 108 ~~~~~~~~~w~Rp~~Hf~P~~gWm----NDPNG~~y~~G~YHLFYQ~nP~~~~wG-~~~WGHAvS~DLvhW~~lp-~AL~ 181 (704)
+.-+..+++|.+-..=+.|..-|- -.++ .+..+|++||||..+.....+. ...-++|+|+|+.+|+..+ +.|.
T Consensus 59 ha~S~Dlv~W~~~~~al~P~~~~d~~G~~sGs-av~~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg~~~~k~~~pvi~ 137 (445)
T TIGR01322 59 HYTSKDLVHWEDEGVALAPDDPYDSHGCYSGS-AVDNNGQLTLMYTGNVRDSDWNRESYQCLATMDDDGHFEKFGIVVIE 137 (445)
T ss_pred EEECCCccccEECCccCcCCCcccCCceEECe-EEeeCCEEEEEEeccccCCCCCeeEEEEEEEcCCCCeEEECCCceEe
Confidence 334556788876444455543221 1333 3457999999999764322232 2334689999999999876 3454
Q ss_pred cCC-CCCCCcEEeeeEEEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCC---CCCCcCccC
Q 005279 182 ADQ-WYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPP---GIGAKDFRD 257 (704)
Q Consensus 182 Pd~-~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~---g~~~~~fRD 257 (704)
+.. .+. .+.-...+. ..+|+++|+|.+..........+..|+| |++|+.. .++..++. +.....+--
T Consensus 138 ~~~~~~~-~~fRDP~V~-~~~g~~~M~~g~~~~~~~g~i~ly~S~D-----l~~W~~~--g~~~~~~~~~~~~~g~~~EC 208 (445)
T TIGR01322 138 LPPAGYT-AHFRDPKVW-KHNGHWYMVIGAQTETEKGSILLYRSKD-----LKNWTFV--GEILGDGQNGLDDRGYMWEC 208 (445)
T ss_pred CCCCCCc-CcCCCCcEE-eECCEEEEEEEEecCCCceEEEEEECCC-----cccCeEe--cccccccccccCCccceEEC
Confidence 432 221 223345553 4689999999876543223446777777 5899986 45544321 111123567
Q ss_pred CeeEEecCCCeEEEEEeee
Q 005279 258 PTTAWLTSEGKWRIAIGSR 276 (704)
Q Consensus 258 P~Vvw~~~~g~w~Mv~Gs~ 276 (704)
|- ++ +-+++|+|+++..
T Consensus 209 Pd-lf-~l~~k~vL~~s~~ 225 (445)
T TIGR01322 209 PD-LF-SLDGQDVLLFSPQ 225 (445)
T ss_pred Ce-EE-EECCcEEEEEecc
Confidence 87 44 4578999998754
|
|
| >cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.0002 Score=76.19 Aligned_cols=79 Identities=16% Similarity=0.289 Sum_probs=56.4
Q ss_pred CCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCcEEecceeccCCCCCceeeeeeEEcC
Q 005279 240 GNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVS 319 (704)
Q Consensus 240 ~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~ 319 (704)
.||||. .++.||.|++ .+++|||+.++.. ..+.+.+|+|+||.+|+..+..+... ..++| +|+++..+
T Consensus 7 ~nPv~~-------~~~~DP~i~~--~~~~yY~~~t~~~-~~~gi~i~~S~DL~~W~~~g~~~~~~-~~~~W-AP~i~~~~ 74 (280)
T cd09002 7 RNPILA-------GDYPDPSILR--DGEDYYMTHSSFK-YTPGLVIWHSRDLVNWTPVGPALPEY-EGDVW-APDLCKYD 74 (280)
T ss_pred eCCccC-------CCCCCCEEEE--ECCEEEEEEcchh-cCCCEEEEECCCcCCceEccccccCC-CCCEE-cCeeEEEC
Confidence 489985 3468999765 4789999765422 22347799999999999988766432 23589 79998875
Q ss_pred CCCCCCcccccCCCCcEEEEEEeeCC
Q 005279 320 TTGEHGLDTSHNGPGVKHVVKASMDD 345 (704)
Q Consensus 320 ~~~~~gl~~~~~g~~~k~VL~~s~~~ 345 (704)
+ |++|.++...
T Consensus 75 g---------------kyy~yys~~~ 85 (280)
T cd09002 75 G---------------RYYIYFPAIP 85 (280)
T ss_pred C---------------EEEEEEEeec
Confidence 2 7888777643
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs |
| >cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00015 Score=76.59 Aligned_cols=78 Identities=19% Similarity=0.268 Sum_probs=56.0
Q ss_pred CceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCcEEecceeccC---------CCCCcee
Q 005279 241 NPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLHGV---------PNTGMWE 311 (704)
Q Consensus 241 nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~S~Dl~~W~~~~~l~~~~---------~~~gmWE 311 (704)
||||. .++.||.++. .++.|||+.++.....| +.+|+|+||.+|+..+..+... ...++|
T Consensus 1 NPvi~-------~~~~DP~ii~--~~~~yY~~~t~~~~~~g-~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~W- 69 (269)
T cd08989 1 NPILK-------GDNPDPSIIR--AGDDYYMASSTFEWFPG-VQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIW- 69 (269)
T ss_pred CCcCC-------CCCCCCcEEE--ECCeEEEEECccccCCC-cEEEECCccCCCEEccccccCccccccccCCCCCcEE-
Confidence 67774 3578999764 57899999765432223 6789999999999988765431 122488
Q ss_pred eeeeEEcCCCCCCCcccccCCCCcEEEEEEeeC
Q 005279 312 CVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMD 344 (704)
Q Consensus 312 CPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~ 344 (704)
||+++..++ ||+|.++..
T Consensus 70 AP~v~~~~G---------------~yy~yy~~~ 87 (269)
T cd08989 70 APCLSYYDG---------------KFWLIYTAV 87 (269)
T ss_pred cceEEEECC---------------EEEEEEecc
Confidence 999998852 788877765
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended |
| >cd08981 GH43_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00046 Score=73.83 Aligned_cols=78 Identities=15% Similarity=0.074 Sum_probs=55.0
Q ss_pred cCccCCeeEEecCCCeEEEEEeeecCC----eeEEEEEEeCCCCCcEEecceeccCC---CCCceeeeeeEEcCCCCCCC
Q 005279 253 KDFRDPTTAWLTSEGKWRIAIGSRINR----TGITFVYDTKDFINYELLRGVLHGVP---NTGMWECVDFYPVSTTGEHG 325 (704)
Q Consensus 253 ~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~----~G~~llY~S~Dl~~W~~~~~l~~~~~---~~gmWECPdlf~l~~~~~~g 325 (704)
..+|||+|++.+.+|+|||+..+.... ...+-+|+|+||++|+..+.++...+ ......+|++...++
T Consensus 4 ~~~~DP~v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~~~G----- 78 (291)
T cd08981 4 IRIRDPFILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHEYKG----- 78 (291)
T ss_pred ccccCCEEEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeeeeeCC-----
Confidence 358999988766689999998764211 12367999999999999888775322 123456799887642
Q ss_pred cccccCCCCcEEEEEEeeCC
Q 005279 326 LDTSHNGPGVKHVVKASMDD 345 (704)
Q Consensus 326 l~~~~~g~~~k~VL~~s~~~ 345 (704)
||+|..+...
T Consensus 79 ----------~yyly~s~~~ 88 (291)
T cd08981 79 ----------RYYMFATFHN 88 (291)
T ss_pred ----------EEEEEEEecc
Confidence 7888776543
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >smart00640 Glyco_32 Glycosyl hydrolases family 32 | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00035 Score=78.92 Aligned_cols=159 Identities=16% Similarity=0.190 Sum_probs=94.1
Q ss_pred CCCCCCcccccccccceeecCCCCccCCCc-----ceEECCEEEEEEeeCC-CCC--CCCCcE-EEEEEeCCCcceeecc
Q 005279 107 SYPWTNNMLSWQRTAFHFQPQKNWMNDPNG-----PVFYKGWYHLFYQYNP-NGA--IWGDIV-WGHAVSKDLIHWYHLP 177 (704)
Q Consensus 107 ~~~~~~~~~~w~Rp~~Hf~P~~gWmNDPNG-----~~y~~G~YHLFYQ~nP-~~~--~wG~~~-WGHAvS~DLvhW~~lp 177 (704)
.+..+..+++|.+..-=+.|... .|.+| .+..+|.||+||.-+- ... ..++.. -.+|+|+|++||+..+
T Consensus 41 gha~S~Dlv~W~~~~~aL~P~~~--~d~~g~~sGsav~~~~~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d~~~w~k~~ 118 (437)
T smart00640 41 GHAVSKDLVHWTHLPVALAPDEW--YDSNGVFSGSAVIDPGNLSLLYTGNVAIDTNVQVQRQAQQLAASDDLGGTWTKYP 118 (437)
T ss_pred EEEEcCCcceeeecCcccCCCCc--CCCCcEEEEEEEECCCceEEEEcCCcccccccCcccEEEEEEEECCCCCeeEECC
Confidence 34556678888754444666542 24455 3445788999998652 111 122332 3678899999999873
Q ss_pred --cccccCCCCCCCcEEeeeEEEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCc
Q 005279 178 --LAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDF 255 (704)
Q Consensus 178 --~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~f 255 (704)
+.|.+...+.....=...++..++|+++|++.+...+..-.+.++.|+| |++|+.. .+++.++.+.....|
T Consensus 119 ~~Pvi~~~p~~~~~~fRDP~Vf~~~~~~~~m~~g~~~~~~~G~i~ly~S~D-----l~~W~~~--~~~~~~~~~~~g~~w 191 (437)
T smart00640 119 GNPVLVPPPGIGTEHFRDPKVFWYDGDKWYMVIGASDEDKTGIALLYRSTD-----LKNWTLL--GELLHSGVGDTGGMW 191 (437)
T ss_pred CCcEEeCCCCCCCCCcCCCCccEECCCEEEEEEEEEecCCCeEEEEEECCC-----cccCeEC--CcccccCCCCccceE
Confidence 4455433222222334455444446999999876544445577888887 4899875 455443212111346
Q ss_pred cCCeeEEecCCC-----eEEEEEeee
Q 005279 256 RDPTTAWLTSEG-----KWRIAIGSR 276 (704)
Q Consensus 256 RDP~Vvw~~~~g-----~w~Mv~Gs~ 276 (704)
-.|- ++ +-++ +|+|+++..
T Consensus 192 ECPd-lf-~l~~~~~~~~~vLi~s~~ 215 (437)
T smart00640 192 ECPD-LF-PLPGDGDTSKHVLKVSPQ 215 (437)
T ss_pred ECCc-EE-EeCCCCCceeEEEEECcC
Confidence 6787 33 2344 899998775
|
|
| >cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0019 Score=70.98 Aligned_cols=174 Identities=15% Similarity=0.137 Sum_probs=101.5
Q ss_pred CCCCCcccccccccceeecCCCCcc-----CCCcceEECCEEEEEEeeCCCCC---CCCCcEEEEEEeCCCccee----e
Q 005279 108 YPWTNNMLSWQRTAFHFQPQKNWMN-----DPNGPVFYKGWYHLFYQYNPNGA---IWGDIVWGHAVSKDLIHWY----H 175 (704)
Q Consensus 108 ~~~~~~~~~w~Rp~~Hf~P~~gWmN-----DPNG~~y~~G~YHLFYQ~nP~~~---~wG~~~WGHAvS~DLvhW~----~ 175 (704)
+-.+..+..|.+ .-++.|+ +|.- -+...+..+|+|||||--+-... .--.+..++|+++|+..|. .
T Consensus 45 h~~S~dlv~W~~-~~~l~p~-~~~d~~g~wSGsa~~~~dg~~~lfYTg~~~~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~ 122 (349)
T cd08997 45 YFYSRAGGNWID-GGKVFPD-GLSPGSREWSGSATLDDDGTVQLFYTAVGRKGEPQPTFTQRLALARGTLSVVNLSGFED 122 (349)
T ss_pred EEEeCCCCcccC-CCccCCC-CcccCCCeEcceEEEeCCCeEEEEEeccccCCCCCCCceEEEEEEECCCcceEecccCc
Confidence 445556667766 4455554 3321 12222223599999999763211 1124678999999985554 3
Q ss_pred cccccccCC-CCCCC-------------cEEeeeEEEec-CCcEEEEEecccCCc-------------------------
Q 005279 176 LPLAMVADQ-WYDIM-------------GVWTGSATILP-DGKLMMLYTGSTNES------------------------- 215 (704)
Q Consensus 176 lp~AL~Pd~-~yD~~-------------Gv~SGSavv~~-dG~~~~~YTG~~~~~------------------------- 215 (704)
....+.++. .|+.. ..=...++.++ +|+.+|++++++...
T Consensus 123 ~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~ 202 (349)
T cd08997 123 HHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPETGKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGAS 202 (349)
T ss_pred cceeeeCCCceEEeccccccccccCccCcccCCEEEecCCCCcEEEEEEeccCCCCCccccccccccccccccccccccc
Confidence 334455554 33211 11234454444 599999999987421
Q ss_pred --eeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecC-------CeeEEEEE
Q 005279 216 --VQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRIN-------RTGITFVY 286 (704)
Q Consensus 216 --~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~-------~~G~~llY 286 (704)
.-+++||.+++. .|.+|+-+ .|++.+. +. ...+-+|.+ + +.+|+|||+..++.. ....+..|
T Consensus 203 ~~~G~IGia~~~s~---dl~~W~~~--~PL~~a~-~v-~d~~E~P~v-~-~~~gk~yL~~s~~~~~~~~~~~~~~~~~g~ 273 (349)
T cd08997 203 YQNGNVGIAVAKND---DLTEWKLL--PPLLEAN-GV-NDELERPHV-V-FHNGKYYLFTISHRSTFAPGLSGPDGLYGF 273 (349)
T ss_pred cccceEEEEEecCC---CCCCcEEc--CccccCC-Cc-CCceEcceE-E-EECCEEEEEEeCCcCccccccCCCCcEEEE
Confidence 134667876642 25789876 6787643 22 234678995 4 469999999775531 11235566
Q ss_pred EeCCCC
Q 005279 287 DTKDFI 292 (704)
Q Consensus 287 ~S~Dl~ 292 (704)
.|+++.
T Consensus 274 vsdsl~ 279 (349)
T cd08997 274 VSDSLR 279 (349)
T ss_pred EeCCCC
Confidence 777764
|
Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n |
| >cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0059 Score=64.27 Aligned_cols=138 Identities=15% Similarity=0.130 Sum_probs=80.5
Q ss_pred CCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCc-ceee-cccccccCCCCCCCcEEeeeEEEecCCcEEEEEec
Q 005279 133 DPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLI-HWYH-LPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTG 210 (704)
Q Consensus 133 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLv-hW~~-lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG 210 (704)
-|. +++++|+|||||.-+ ...|+|+|+|.. .|+. .+..+..... .......++++.+.||+.+|+|.+
T Consensus 68 AP~-v~~~~g~yy~yys~~--------~~i~va~s~~p~gp~~~~~~~p~~~~~~-~~~~~iDp~vf~d~dG~~yl~~~~ 137 (275)
T cd09004 68 APS-VIERNGKYYFYFSAN--------GGIGVAVADSPLGPFKDALGKPLIDKFT-FGAQPIDPDVFIDDDGQAYLYWGG 137 (275)
T ss_pred CCe-EEEECCEEEEEEEcC--------CcEEEEEeCCCCCCCCCCCCCccccCCc-CCCCccCCCeEECCCCCEEEEEcC
Confidence 454 788899999999854 357999999976 6876 3322222211 223456778877789999999965
Q ss_pred ccCCceeeEEEE-EeCCCCCCccceeEeeCCCcee-cCCCCCCCcCccCCeeEEecCCCeEEEEEeeec-C-CeeEEEEE
Q 005279 211 STNESVQVQNLA-YPADPSDPLLIKWVKYPGNPVL-VPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI-N-RTGITFVY 286 (704)
Q Consensus 211 ~~~~~~q~q~lA-~S~D~~D~~l~~W~K~~~nPVl-~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~-~-~~G~~llY 286 (704)
.. ...++ .+.| +.+|+.. ..++ ..+.+ -+--|.+ + +.+|+|||++.+.. . ..-.+.+.
T Consensus 138 ~~-----~~~i~~l~~d-----~~~~~~~--~~~~~~~~~~----~~EgP~i-~-k~~G~yyl~ys~~~~~~~~Y~~~ya 199 (275)
T cd09004 138 WG-----HCNVAKLNED-----MISFDGE--RDGSEITPKN----YFEGPFM-F-KRNGIYYLMWSEGGWTDPDYHVAYA 199 (275)
T ss_pred cC-----CEEEEEECCC-----cccccCc--ceeeeccCCC----ceecceE-E-EECCEEEEEEECCCCCCCCceEEEE
Confidence 31 12222 3344 2556432 1121 11111 2345884 4 46899999887653 1 12255556
Q ss_pred EeCCCC-CcEEec
Q 005279 287 DTKDFI-NYELLR 298 (704)
Q Consensus 287 ~S~Dl~-~W~~~~ 298 (704)
+|++.. -|+..+
T Consensus 200 ~s~~~~GP~~~~~ 212 (275)
T cd09004 200 MADSPLGPFERPG 212 (275)
T ss_pred EcCCCCCCcccCC
Confidence 777753 365543
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.014 Score=60.87 Aligned_cols=181 Identities=17% Similarity=0.255 Sum_probs=102.8
Q ss_pred cccccceeecC--CCCccCCCcceE-ECCEEEEEEeeCCCCCCCCCcEEEEEEeCC-CcceeecccccccCCCCCCCcEE
Q 005279 117 WQRTAFHFQPQ--KNWMNDPNGPVF-YKGWYHLFYQYNPNGAIWGDIVWGHAVSKD-LIHWYHLPLAMVADQWYDIMGVW 192 (704)
Q Consensus 117 w~Rp~~Hf~P~--~gWmNDPNG~~y-~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~D-LvhW~~lp~AL~Pd~~yD~~Gv~ 192 (704)
|-.|+.=+.++ ..=..||. +++ .+|+.||||........|......+.+|+| ..+|.... .|.+.......+..
T Consensus 32 Ws~~~~v~~~~~~~~~~~~p~-~~~~~~g~l~l~~~~~~~~~~~~~~~~~~~~S~D~G~TWs~~~-~l~~~~~~~~~~~~ 109 (275)
T PF13088_consen 32 WSEPRIVADGPKPGRRYGNPS-LVVDPDGRLWLFYSAGSSGGGWSGSRIYYSRSTDGGKTWSEPT-DLPPGWFGNFSGPG 109 (275)
T ss_dssp EEEEEEEETSTBTTCEEEEEE-EEEETTSEEEEEEEEEETTESCCTCEEEEEEESSTTSS-EEEE-EEHHHCCCSCEECS
T ss_pred eCCCEEEeeccccCCcccCcE-EEEeCCCCEEEEEEEccCCCCCCceeEEEEEECCCCCCCCCcc-ccccccccceeccc
Confidence 44444434444 22334675 444 499999999766665555555555599999 89999754 33333222233445
Q ss_pred eeeEEEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEE
Q 005279 193 TGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIA 272 (704)
Q Consensus 193 SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv 272 (704)
.+..+...+|++++-+.... .......+.+|.|++ .+|+... ++.. ....--|.++ ...+|+.+|+
T Consensus 110 ~~~~i~~~~G~l~~~~~~~~-~~~~~~~~~~S~D~G----~tW~~~~--~~~~------~~~~~e~~~~-~~~dG~l~~~ 175 (275)
T PF13088_consen 110 RGPPIQLPDGRLIAPYYHES-GGSFSAFVYYSDDGG----KTWSSGS--PIPD------GQGECEPSIV-ELPDGRLLAV 175 (275)
T ss_dssp EEEEEEECTTEEEEEEEEES-SCEEEEEEEEESSTT----SSEEEEE--ECEC------SEEEEEEEEE-EETTSEEEEE
T ss_pred eeeeeEecCCCEEEEEeecc-ccCcceEEEEeCCCC----ceeeccc--cccc------cCCcceeEEE-ECCCCcEEEE
Confidence 55556667998777533222 223567788999986 9998852 2210 1122345533 3578888888
Q ss_pred EeeecCCeeEEEEEEeCC-CCCcEEecceeccCCCCCceeeeeeEEcC
Q 005279 273 IGSRINRTGITFVYDTKD-FINYELLRGVLHGVPNTGMWECVDFYPVS 319 (704)
Q Consensus 273 ~Gs~~~~~G~~llY~S~D-l~~W~~~~~l~~~~~~~gmWECPdlf~l~ 319 (704)
+... .. +.+.+++|.| ..+|+.....-. +.. =.++.++++.
T Consensus 176 ~R~~-~~-~~~~~~~S~D~G~TWs~~~~~~~--~~~--~~~~~~~~~~ 217 (275)
T PF13088_consen 176 FRTE-GN-DDIYISRSTDGGRTWSPPQPTNL--PNP--NSSISLVRLS 217 (275)
T ss_dssp EEEC-SS-TEEEEEEESSTTSS-EEEEEEEC--SSC--CEEEEEEECT
T ss_pred EEcc-CC-CcEEEEEECCCCCcCCCceeccc--Ccc--cCCceEEEcC
Confidence 7654 21 2566677766 899997443222 211 1445556654
|
... |
| >cd08988 GH43_ABN Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0081 Score=63.73 Aligned_cols=143 Identities=15% Similarity=0.160 Sum_probs=79.0
Q ss_pred cCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCc------ceeecccccccCCCCCCCcEEeeeEEEecCCcEE
Q 005279 132 NDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLI------HWYHLPLAMVADQWYDIMGVWTGSATILPDGKLM 205 (704)
Q Consensus 132 NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLv------hW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~ 205 (704)
.-|. +.|++|+|||||.-...+. .....|.|+|++.. .|+.....+.++.. +......+++++++||+.+
T Consensus 58 WAP~-v~~~~G~yylyys~~~~~~--~~~~igva~s~~p~Gp~~~~~w~~~~~i~~~~~~-~~~~~iDp~~f~DdDG~~Y 133 (279)
T cd08988 58 WAPD-IYQHNGKFYLYYSVSAFGS--NTSAIGLAVNKTIDGPSPDYGWEKGGVVISSDAS-DNYNAIDPAIIFDQHGQPW 133 (279)
T ss_pred ecce-EEEECCEEEEEEEeccCCC--CCceEEEEEcCCCCCCCcCcCccccCceEecCCC-CCCCccCCceEEcCCCCEE
Confidence 3443 6788999999998765432 23578999999864 25543333333322 1234578888888899999
Q ss_pred EEEecccCCceeeEEEEEeCCCCCCccceeEeeCCC--ceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec-----C
Q 005279 206 MLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGN--PVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI-----N 278 (704)
Q Consensus 206 ~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~n--PVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~-----~ 278 (704)
|+|-... ... +..-.+.|.. ... ..+. .++..+.. ..-.-=|+ ++ +.+|+|||+..... +
T Consensus 134 l~~g~~~-~gi--~~~eL~~d~~-----~~~-~~~~~~~i~~~~~~--~~~~Egp~-i~-k~~g~YYl~~S~g~~~~~~~ 200 (279)
T cd08988 134 LSFGSFW-GGI--KLFELDKDTM-----KPA-EPGELHSIAGRERS--SAAIEAPF-IL-YRGDYYYLFVSFGLCCRGGD 200 (279)
T ss_pred EEecccC-CCE--EEEEECcccC-----Ccc-CCCcceEEeccCCC--CCceEeeE-EE-EcCCeEEEEEEcCcccCCCC
Confidence 9995421 111 1222333321 110 0111 12221110 11223577 45 46899999876532 1
Q ss_pred CeeEEEEEEeCCC
Q 005279 279 RTGITFVYDTKDF 291 (704)
Q Consensus 279 ~~G~~llY~S~Dl 291 (704)
..-.+.+++|+++
T Consensus 201 ~~y~v~~arS~~~ 213 (279)
T cd08988 201 STYKIAVGRSKNI 213 (279)
T ss_pred CCeEEEEEEeCCC
Confidence 2235777888875
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla |
| >cd08985 GH43_6 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0083 Score=63.32 Aligned_cols=140 Identities=14% Similarity=0.129 Sum_probs=83.4
Q ss_pred ceEE--CCEEEEEEeeCCCCCCCCCcEEEEEEeCCCc-ceeecccccccCCCCCCCcEEeeeEEEecCCcEEEEEecccC
Q 005279 137 PVFY--KGWYHLFYQYNPNGAIWGDIVWGHAVSKDLI-HWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTN 213 (704)
Q Consensus 137 ~~y~--~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLv-hW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~ 213 (704)
++|. +|+|||||..+..+ .+....|+|+|++.. -|+.++..+ |. ..+...+++.+++||+.+|+|....+
T Consensus 70 v~y~~~~g~Y~m~~~~~~~~--~~~~~igvA~Sd~p~Gpf~~~~~~~-~~----~~~~~Dp~vf~DdDG~~Yl~~~~~~~ 142 (265)
T cd08985 70 VIYNAKTGKYVMWMHIDSSD--YSDARVGVATSDTPTGPYTYLGSFR-PL----GYQSRDFGLFVDDDGTAYLLYSDRDN 142 (265)
T ss_pred EEEeCCCCEEEEEEEeCCCC--CcceeEEEEEeCCCCCCCEECCccC-CC----CCCccCCceEEcCCCCEEEEEecCCC
Confidence 4554 59999999987522 346789999999865 477665333 21 23456788888889999999986432
Q ss_pred CceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCC-eeEEEEEEeCCCC
Q 005279 214 ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINR-TGITFVYDTKDFI 292 (704)
Q Consensus 214 ~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~-~G~~llY~S~Dl~ 292 (704)
+...++.-.+. +.++ .+.+..... ...+-.|. ++ +.+|.|||+....... ...+..++|+++.
T Consensus 143 ---~~i~i~~L~~d----~~~~---~~~~~~~~~----~~~~EaP~-i~-K~~g~YYL~~S~~t~~~~~~~~y~~s~s~~ 206 (265)
T cd08985 143 ---SDLYIYRLTDD----YLSV---TGEVTTVFV----GAGREAPA-IF-KRNGKYYLLTSGLTGWNPNDARYATATSIL 206 (265)
T ss_pred ---CceEEEEeCCC----cccc---cceEEEccC----CCccccce-EE-EECCEEEEEEccCCCccCCceEEEEecCCC
Confidence 23445543321 2333 233332211 12345788 55 5689999998654211 1235566777753
Q ss_pred -CcEEecc
Q 005279 293 -NYELLRG 299 (704)
Q Consensus 293 -~W~~~~~ 299 (704)
-|+..+.
T Consensus 207 GP~~~~~~ 214 (265)
T cd08985 207 GPWTDLGN 214 (265)
T ss_pred CCccccCc
Confidence 4555443
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >COG2152 Predicted glycosylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0011 Score=70.65 Aligned_cols=105 Identities=22% Similarity=0.347 Sum_probs=81.5
Q ss_pred cEEeeeEEEecCCcEEEEEecc-----cCCceeeEEEEEeCCCCCCccce-eEeeCCCceecC-CCCCCCcCccCCeeEE
Q 005279 190 GVWTGSATILPDGKLMMLYTGS-----TNESVQVQNLAYPADPSDPLLIK-WVKYPGNPVLVP-PPGIGAKDFRDPTTAW 262 (704)
Q Consensus 190 Gv~SGSavv~~dG~~~~~YTG~-----~~~~~q~q~lA~S~D~~D~~l~~-W~K~~~nPVl~~-p~g~~~~~fRDP~Vvw 262 (704)
.+|.++++ ..++++.|+|-.. .........+|.|+|+ .+ |++.+ +|++.| ...++....-||.|.
T Consensus 30 ~vFNpav~-~~~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dg-----i~~~~~e~-ep~~~P~~~~~e~~G~EDPRvt- 101 (314)
T COG2152 30 SVFNPAVV-LVGGELLLLYRVVEGYYEDHSSISHLRIARSDDG-----IGEFEIEP-EPTLWPANYPYEIYGIEDPRVT- 101 (314)
T ss_pred EEecceeE-EECCEEEEEEEEeccccccCccceEEEEEecccC-----CCceecCC-cceEecCCCchhhhcccCceEE-
Confidence 68999886 4689999999872 2234567889999996 45 99874 899987 334455667899965
Q ss_pred ecCCCeEEEEEeeecCCeeEEEEEEeCCCCCcEEecceecc
Q 005279 263 LTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLHG 303 (704)
Q Consensus 263 ~~~~g~w~Mv~Gs~~~~~G~~llY~S~Dl~~W~~~~~l~~~ 303 (704)
+.+++|+|.+.+..+.+-...+..++|+.+|++.+.++..
T Consensus 102 -~I~~~y~mtYTa~s~~g~~~~la~t~~f~n~~rig~i~~p 141 (314)
T COG2152 102 -KIGGRYYMTYTAYSDKGPRLALAVTKDFLNWERIGAIFPP 141 (314)
T ss_pred -EECCEEEEEEEecCCCCcccchhhhhhhhhhhhcccccCC
Confidence 4679999999987665556678889999999999887653
|
|
| >cd08980 GH43_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0074 Score=64.04 Aligned_cols=145 Identities=17% Similarity=0.189 Sum_probs=83.3
Q ss_pred cCCCCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccc-cccCCCCCCC--cEEeeeEEEecCC
Q 005279 126 PQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLA-MVADQWYDIM--GVWTGSATILPDG 202 (704)
Q Consensus 126 P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~A-L~Pd~~yD~~--Gv~SGSavv~~dG 202 (704)
+...+..||+ ++.++|+++|||-..-.....+.--|....+.| ..+...+.. ..|...++.. ++.-|..++..+|
T Consensus 108 ~~~~~~iDp~-~~~ddG~~Yl~~~~~~~~~~~~~~i~~~~l~~~-~~~~g~~~~i~~p~~~we~~~~~~~EgP~~~k~~G 185 (288)
T cd08980 108 PTDRWAIDGT-VFEHNGQLYFVWSGWEGRTNGNQNLYIAKMSNP-WTLTGPRVLISRPEYDWERQGPGVNEGPAALKRNG 185 (288)
T ss_pred CCCCeeeeeE-EEEECCEEEEEEEccCCCCCCCccEEEEECCCC-CccCCcceEecCCCCCceecCceeeECcEEEEECC
Confidence 4466778996 566789988888532211111222344333433 345433333 3344444443 5678888888899
Q ss_pred cEEEEEecccC-CceeeEEEEEeCCCCCCcc-ceeEeeCCCceecCCC--CCCCcCccCCeeEEecCCCe-EEEEEeee
Q 005279 203 KLMMLYTGSTN-ESVQVQNLAYPADPSDPLL-IKWVKYPGNPVLVPPP--GIGAKDFRDPTTAWLTSEGK-WRIAIGSR 276 (704)
Q Consensus 203 ~~~~~YTG~~~-~~~q~q~lA~S~D~~D~~l-~~W~K~~~nPVl~~p~--g~~~~~fRDP~Vvw~~~~g~-w~Mv~Gs~ 276 (704)
.++|+|.+..- .....+++|+++...+++. ..|+|. .+|||...+ ++. .--...+ ....+|+ |+|++=+.
T Consensus 186 ~yYl~yS~~~~~~~~Y~v~~a~~~~~~~~~~~~~~~~~-~~pil~~~~~~~~~--g~GH~~i-v~~~~G~~~~~~yH~~ 260 (288)
T cd08980 186 KVFLTYSASGSWTPDYCLGLLTADGGADLLDPASWTKS-PTPVFQSSPENGVY--GPGHNSF-TKSPDGTEDWIVYHAR 260 (288)
T ss_pred EEEEEEECCCCCCCCCEEEEEEEcCCCCCCChhhCcCC-CCCceecCCCCccC--cCCccce-EECCCCCEEEEEEccc
Confidence 99999997653 3344567888765433322 358886 479887543 211 1113443 3356776 88886443
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.012 Score=63.99 Aligned_cols=167 Identities=20% Similarity=0.259 Sum_probs=99.6
Q ss_pred ccccccceeecC--CCCccCCCcceEEC-CEEEEEEeeCCCCC-------CCCCcEEEEEEeCCC-cceeecccccccCC
Q 005279 116 SWQRTAFHFQPQ--KNWMNDPNGPVFYK-GWYHLFYQYNPNGA-------IWGDIVWGHAVSKDL-IHWYHLPLAMVADQ 184 (704)
Q Consensus 116 ~w~Rp~~Hf~P~--~gWmNDPNG~~y~~-G~YHLFYQ~nP~~~-------~wG~~~WGHAvS~DL-vhW~~lp~AL~Pd~ 184 (704)
.|..|+.--... ...+.||. ++... |+-+|||...+... .+...+-.+..|.|- ..|.. |..|.+..
T Consensus 59 tW~~~~~i~~~~~~~~~~~~p~-~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~-p~~l~~~~ 136 (351)
T cd00260 59 TWSPSTVISDGDGKSSRVKDPT-VVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDDGITWSS-PRDLTPSV 136 (351)
T ss_pred cccccEEehhcCCCCCcEEcce-EEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcCCceecC-CccCCccc
Confidence 455554333332 24566886 66776 99999998887642 233556678888886 89975 43443332
Q ss_pred C-CCCCcEE--eeeEEEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeE
Q 005279 185 W-YDIMGVW--TGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTA 261 (704)
Q Consensus 185 ~-yD~~Gv~--SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vv 261 (704)
. .+-...+ .|..++..+|++++.+.+....+.....+.+|+|+| .+|+... +. ++ ......|.++
T Consensus 137 ~~~~~~~~~~~~g~gi~l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G----~tW~~~~--~~--~~----~~~~~e~~i~ 204 (351)
T cd00260 137 KGDNWAALFTGPGSGIQMKDGRLVFPVYGGNAGGRVSSAIIYSDDSG----KTWKLGE--GV--ND----AGGCSECSVV 204 (351)
T ss_pred cCcceeEEEecCcCeEEecCCcEEEEEEEEcCCCCEEEEEEEECCCC----CCcEECC--CC--CC----CCCCcCCEEE
Confidence 1 0111222 233455678998876555443334556778999876 8997632 11 11 0223468865
Q ss_pred EecCCCeEEEEEeeecCCeeEEEEEEeCC-CCCcEEecc
Q 005279 262 WLTSEGKWRIAIGSRINRTGITFVYDTKD-FINYELLRG 299 (704)
Q Consensus 262 w~~~~g~w~Mv~Gs~~~~~G~~llY~S~D-l~~W~~~~~ 299 (704)
- -++|+.+|+..... .+...+|.|.| ...|+....
T Consensus 205 e-l~dG~l~~~~R~~~--~~~~~~~~S~D~G~tWs~~~~ 240 (351)
T cd00260 205 E-LSDGKLYMYTRDNS--GGRRPVYESRDMGTTWTEALG 240 (351)
T ss_pred E-ecCCEEEEEEeeCC--CCcEEEEEEcCCCcCcccCcC
Confidence 3 35898888776542 35566778876 589986443
|
They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. |
| >cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.011 Score=62.47 Aligned_cols=127 Identities=14% Similarity=0.085 Sum_probs=74.2
Q ss_pred CCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCc-ceeecccccccCCCCCCCcEEeeeEEEecCCcEEEEEecc
Q 005279 133 DPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLI-HWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGS 211 (704)
Q Consensus 133 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLv-hW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~ 211 (704)
-|. +.|.+|+|||||-.+. ..-+.|+|++.. .|+..+... ....+++.+++||+.+|+|.+.
T Consensus 78 AP~-v~~~~gkyy~yys~~~-------~~~~v~~a~~p~Gpw~~~~~~~---------~~iDp~~f~D~dG~~Yl~~~~~ 140 (269)
T cd09001 78 APS-LRYHNGTFYVFFCTNT-------GGTYIYTADDPEGPWTKTALDG---------GYHDPSLLFDDDGTAYLVYGGG 140 (269)
T ss_pred CCc-eEEECCEEEEEEEecC-------CCeEEEEcCCCCCCCcCCCcCC---------CcccCceEEcCCCCEEEEeCCC
Confidence 453 6888999999998751 124678887754 676654221 3456778778899999999643
Q ss_pred cCCceeeEEEEE-eCCCCCCccceeEeeCCCc-eecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeC
Q 005279 212 TNESVQVQNLAY-PADPSDPLLIKWVKYPGNP-VLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTK 289 (704)
Q Consensus 212 ~~~~~q~q~lA~-S~D~~D~~l~~W~K~~~nP-Vl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~S~ 289 (704)
.+.++. +.|. .... ...+ ++..+. ......--|++ + +.+|+|||++.+..+....+.+++|+
T Consensus 141 ------~i~~~~l~~d~-----~~~~--~~~~~~~~~~~-~~~~~~Egp~i-~-k~~G~YYl~~S~~~~~~~~~~~~~s~ 204 (269)
T cd09001 141 ------TIRLVELSPDL-----TGVG--GKDQVIIDAGE-EIGLGAEGSHL-Y-KINGYYYIFNIAWGGGGRTQTCLRSK 204 (269)
T ss_pred ------cEEEEEECccc-----CCcC--CCceEEEeCCC-ccccccccCeE-E-EECCEEEEEEecCCCCCceEEEEEeC
Confidence 234443 3332 2221 1223 333321 11122345874 4 56899999987653222355678888
Q ss_pred CCC
Q 005279 290 DFI 292 (704)
Q Consensus 290 Dl~ 292 (704)
++.
T Consensus 205 ~~~ 207 (269)
T cd09001 205 SLT 207 (269)
T ss_pred CCC
Confidence 754
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >cd09003 GH43_AXH_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.031 Score=60.50 Aligned_cols=168 Identities=14% Similarity=0.265 Sum_probs=90.9
Q ss_pred cccccccccceeec--CCCCc---cCCCcceEEC----CEEEEEEeeCCCCCCCCCcEEEEEEeCCCc-ceeec-ccccc
Q 005279 113 NMLSWQRTAFHFQP--QKNWM---NDPNGPVFYK----GWYHLFYQYNPNGAIWGDIVWGHAVSKDLI-HWYHL-PLAMV 181 (704)
Q Consensus 113 ~~~~w~Rp~~Hf~P--~~gWm---NDPNG~~y~~----G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLv-hW~~l-p~AL~ 181 (704)
.|..|+....-|.| ...|. --|. +++++ |+|+|||--. ....|.|+|++.. .|+.. +..|.
T Consensus 55 DL~~W~~~g~v~~~~~~~~w~~~~WAP~-v~~~~~~~~gkyylyy~~~-------~~~igva~SdsP~GP~~~~~g~~l~ 126 (311)
T cd09003 55 DMVNWTDHGEIFVPNGIAKWAGNSWAPS-IAVKKINGKGKFYLYFANG-------GGGIGVLTADSPVGPWTDPLGKPLI 126 (311)
T ss_pred CCCCcEEcccccCcCCCCCcccccCCCc-eEEeccCCCCEEEEEEecC-------CCeEEEEEcCCCCCCcccCCCCeee
Confidence 35566554444432 22332 2353 57777 9999999532 3457999999965 79874 32222
Q ss_pred -cCC-CCC-CCcEEeeeEEEecCCcEEEEEecccC----CceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcC
Q 005279 182 -ADQ-WYD-IMGVWTGSATILPDGKLMMLYTGSTN----ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKD 254 (704)
Q Consensus 182 -Pd~-~yD-~~Gv~SGSavv~~dG~~~~~YTG~~~----~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~ 254 (704)
+.. ..+ ......+++++++||+.+|+|.+... ...+.+.+|.-.+. +.+ ..+.++....+ ..
T Consensus 127 ~~~~~~~~~~~~~iDp~~f~DdDG~~Yl~~g~~~~~~~~~~~~~i~i~~l~~D----~~~---~~g~~~~i~~~----~~ 195 (311)
T cd09003 127 TGSTPGCAGVVWLFDPAVFVDDDGQGYLYFGGGVPGGRWANPNTARVIKLGDD----MIS---VDGSAVTIDAP----YF 195 (311)
T ss_pred cCCCCCccCCccccCCCeEECCCCCEEEEECCccCCCccccCCCEEEEEeCCC----cee---ccCCceEccCC----Cc
Confidence 111 111 11246888888889999999975321 11133445544321 122 22333332211 12
Q ss_pred ccCCeeEEecCCCeEEEEEeeec-------CCeeEEEEEEeCCCC-CcEEeccee
Q 005279 255 FRDPTTAWLTSEGKWRIAIGSRI-------NRTGITFVYDTKDFI-NYELLRGVL 301 (704)
Q Consensus 255 fRDP~Vvw~~~~g~w~Mv~Gs~~-------~~~G~~llY~S~Dl~-~W~~~~~l~ 301 (704)
+-=|. ++ +.+|+|||++.+.- .....+.+.+|++.. -|+..++++
T Consensus 196 ~Egp~-~~-K~~G~YYL~ys~~~~~~~~~~~~~y~v~y~~s~~~~GP~~~~g~il 248 (311)
T cd09003 196 FEASG-LH-KINGTYYYSYCTNFGGRDPGKPPPGRIAYMTSKNPMGPFTYKGIIL 248 (311)
T ss_pred eEeee-EE-EECCEEEEEEeCCCCccCCCCCCceeEEEEEcCCCCCCcccCCEec
Confidence 34577 44 57899999886541 223455556777643 466544443
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose |
| >COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.014 Score=66.90 Aligned_cols=141 Identities=21% Similarity=0.381 Sum_probs=79.8
Q ss_pred EEEEeCCCcceeecccccccCC------C-CCCCcEEeeeEEEecCCcEEEEEecccCCc---eeeEEEEEeCCCCCCcc
Q 005279 163 GHAVSKDLIHWYHLPLAMVADQ------W-YDIMGVWTGSATILPDGKLMMLYTGSTNES---VQVQNLAYPADPSDPLL 232 (704)
Q Consensus 163 GHAvS~DLvhW~~lp~AL~Pd~------~-yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~---~q~q~lA~S~D~~D~~l 232 (704)
.-+.|+||+||+...-.|.+.. . -+..|||..++. .+||+++|+||-..... .-..+..++.+..+
T Consensus 56 ~i~hS~DL~nW~~v~tpl~~~~~ld~kgn~~~S~giWAPdl~-y~dGkfwl~ytdvk~~~g~~k~~~nyl~t~~s~~--- 131 (549)
T COG3507 56 AIHHSRDLVNWTLVSTPLIRTSQLDLKGNFPYSGGIWAPDLS-YHDGKFWLYYTDVKRSGGPYKNAGNYLVTAESID--- 131 (549)
T ss_pred eeeccccccCcEEecccccCcchhhhhcccCCCCceecccee-cCCCcEEEEEecccccCCcccccccEEEEecCCC---
Confidence 3477999999998876555543 2 146789999986 79999999998654321 11122233322211
Q ss_pred ceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCC------eeEEEEEEeCCCCCcEEecc----eec
Q 005279 233 IKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINR------TGITFVYDTKDFINYELLRG----VLH 302 (704)
Q Consensus 233 ~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~------~G~~llY~S~Dl~~W~~~~~----l~~ 302 (704)
..|.. |+..+-. .--||.+ +++++|+-+|+.|+-..+ .|+++ +-.|-..-++.+. ++.
T Consensus 132 G~WsD----pi~l~~~-----~~iDPsl-f~D~dGr~wlv~~~w~~~~~~~~~~~i~l--~~~~~~~~~l~g~~~~~~~~ 199 (549)
T COG3507 132 GPWSD----PIKLNGS-----NAIDPSL-FFDKDGRKWLVNGSWDGGIFMHSFAGIIL--QEYDKTTQKLVGQGYKIIFD 199 (549)
T ss_pred CCccc----ceecCCc-----CccCCce-eecCCCCEEEEecccCCCcccccccceee--eeccccccccCCccceeEec
Confidence 35643 4443221 1249995 457788888888876421 23433 3333222223232 332
Q ss_pred cCCCCCceeeeeeEEcCC
Q 005279 303 GVPNTGMWECVDFYPVST 320 (704)
Q Consensus 303 ~~~~~gmWECPdlf~l~~ 320 (704)
. .+.+.-|-|-+++.++
T Consensus 200 G-~~~~~~EGPhl~k~~g 216 (549)
T COG3507 200 G-GNGGLTEGPHLYKKTG 216 (549)
T ss_pred c-CCCccccCceeeccCC
Confidence 2 1123678888877653
|
|
| >cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.034 Score=59.06 Aligned_cols=142 Identities=16% Similarity=0.095 Sum_probs=80.2
Q ss_pred cCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCc-ceeecccccccCCCCCCCcEEeeeEEEecCCcEEEEEec
Q 005279 132 NDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLI-HWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTG 210 (704)
Q Consensus 132 NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLv-hW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG 210 (704)
.-|. ++|++|+|||||-..... +...-+.|+|+|.- -|++ +. +.+. .+..++++.++||+++|+|-.
T Consensus 69 WAP~-v~~~~g~yy~yy~~~~~~---~~~~~~v~~s~~p~gpw~~-~~-~~~~------~~iDp~vf~d~dG~~Y~~~~~ 136 (288)
T cd09000 69 WAPT-IRYHDGTFYLITTNVDGM---KDGGNFIVTADDPAGPWSD-PV-WLDS------GGIDPSLFFDDDGKVYLVGNG 136 (288)
T ss_pred Ecce-EEEECCEEEEEEEecCCC---CCCceEEEEeCCCCCCCcC-CE-ecCC------CccCCceeEcCCCCEEEEecc
Confidence 3464 688899999999876432 23345678898873 6764 22 2221 456788877779999998865
Q ss_pred ccCC----ceeeEEEEEeCCCCCCccceeEeeCCCce-ecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec-CCeeEEE
Q 005279 211 STNE----SVQVQNLAYPADPSDPLLIKWVKYPGNPV-LVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI-NRTGITF 284 (704)
Q Consensus 211 ~~~~----~~q~q~lA~S~D~~D~~l~~W~K~~~nPV-l~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~-~~~G~~l 284 (704)
.... ..+.+.++.... ..++- .+.|+ +..... ..-.--|. ++ +.+|+|||++.... ...-.+.
T Consensus 137 ~~~~~~~~~~~~i~~~~l~~------~~~~~-~~~~~~~~~~~~--~~~~Egp~-v~-k~~g~YYl~ys~~~~~~~~~v~ 205 (288)
T cd09000 137 WDERRGYNGHGGIWLQEIDL------ETGKL-LGEPKVIWNGTG--GRWPEGPH-LY-KRDGWYYLLIAEGGTGYGHSVT 205 (288)
T ss_pred cCCccccCCCCcEEEEEEcc------ccCCC-CCCcEEEEeCCC--CCCcccCe-EE-EECCEEEEEEecCCCCCCeEEE
Confidence 4221 113344553322 11211 12221 111100 01123587 44 46899999986432 2223577
Q ss_pred EEEeCCCC-CcEE
Q 005279 285 VYDTKDFI-NYEL 296 (704)
Q Consensus 285 lY~S~Dl~-~W~~ 296 (704)
+++|+++. -|+.
T Consensus 206 ~~~s~~~~Gp~~~ 218 (288)
T cd09000 206 VARSRSITGPYEP 218 (288)
T ss_pred EEEeCCCCCCCcc
Confidence 88999876 5655
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.1 Score=54.31 Aligned_cols=161 Identities=15% Similarity=0.098 Sum_probs=86.5
Q ss_pred CEEEEEEeeCCCCCCCCCcEEEEEEe--CCC-cceeecccccccCCCCCCCcEEeeeEEEecCCcEEEEEecccCCc---
Q 005279 142 GWYHLFYQYNPNGAIWGDIVWGHAVS--KDL-IHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNES--- 215 (704)
Q Consensus 142 G~YHLFYQ~nP~~~~wG~~~WGHAvS--~DL-vhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~--- 215 (704)
|....|+.- +...|...-.-.+| +|. .+|...-. +.... .....+..++.+.+++|+++|+|+......
T Consensus 1 G~l~a~~~~---~~~~~~~d~~i~~S~s~D~G~tWs~~~~-v~~~~-~~~~~~~~p~~~~~~~g~l~l~~~~~~~~~~~~ 75 (275)
T PF13088_consen 1 GRLLAVWEG---GSDEGAIDIVIRRSRSTDGGKTWSEPRI-VADGP-KPGRRYGNPSLVVDPDGRLWLFYSAGSSGGGWS 75 (275)
T ss_dssp SEEEEEEEE---SSCSCCEEEEEEEECCCCCTTEEEEEEE-EETST-BTTCEEEEEEEEEETTSEEEEEEEEEETTESCC
T ss_pred CeEEEEEEC---CcccCCCCEEEEEEEeeCCCCeeCCCEE-Eeecc-ccCCcccCcEEEEeCCCCEEEEEEEccCCCCCC
Confidence 455666655 44455555555555 987 88987543 33332 123456777777778999999995543221
Q ss_pred eeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEe-CCCCCc
Q 005279 216 VQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDT-KDFINY 294 (704)
Q Consensus 216 ~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~S-~Dl~~W 294 (704)
.......+|.|+| ++|.... .|...+........+.+-+. -.+|++++..-........+.++.| +..+.|
T Consensus 76 ~~~~~~~~S~D~G----~TWs~~~--~l~~~~~~~~~~~~~~~~i~--~~~G~l~~~~~~~~~~~~~~~~~~S~D~G~tW 147 (275)
T PF13088_consen 76 GSRIYYSRSTDGG----KTWSEPT--DLPPGWFGNFSGPGRGPPIQ--LPDGRLIAPYYHESGGSFSAFVYYSDDGGKTW 147 (275)
T ss_dssp TCEEEEEEESSTT----SS-EEEE--EEHHHCCCSCEECSEEEEEE--ECTTEEEEEEEEESSCEEEEEEEEESSTTSSE
T ss_pred ceeEEEEEECCCC----CCCCCcc--ccccccccceeccceeeeeE--ecCCCEEEEEeeccccCcceEEEEeCCCCcee
Confidence 1122238999976 9999863 22222111111222333222 3588887763222222344444445 557899
Q ss_pred EEecceeccCCCCCceeeeeeEEcC
Q 005279 295 ELLRGVLHGVPNTGMWECVDFYPVS 319 (704)
Q Consensus 295 ~~~~~l~~~~~~~gmWECPdlf~l~ 319 (704)
+....+. ...+.+| |.+++++
T Consensus 148 ~~~~~~~---~~~~~~e-~~~~~~~ 168 (275)
T PF13088_consen 148 SSGSPIP---DGQGECE-PSIVELP 168 (275)
T ss_dssp EEEEECE---CSEEEEE-EEEEEET
T ss_pred ecccccc---ccCCcce-eEEEECC
Confidence 9866543 1112344 4555555
|
... |
| >PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.4 Score=50.15 Aligned_cols=213 Identities=17% Similarity=0.311 Sum_probs=107.8
Q ss_pred cccccceeecCCCCc--cCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCCCCcEEee
Q 005279 117 WQRTAFHFQPQKNWM--NDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTG 194 (704)
Q Consensus 117 w~Rp~~Hf~P~~gWm--NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SG 194 (704)
|--..--.+|..||. -||- .++++|+||+|.-..-.+..||-|.. ..+-+|.....|= ...-+. +.-..
T Consensus 9 WtStg~L~~Pk~g~~slKD~T-~V~ynGk~~VyAtt~d~~~~y~sm~f-----~~Ftdws~~~sA~--q~~m~~-~~vAP 79 (271)
T PF03664_consen 9 WTSTGPLAQPKSGWVSLKDFT-IVPYNGKHHVYATTADTGGGYGSMNF-----GPFTDWSQMASAS--QNYMDQ-SAVAP 79 (271)
T ss_pred eccCCccccCCCCceeccCce-EEeECCEEEEEEEeccCCCccceEee-----eccCCHHHhhccc--cccCCc-ccccc
Confidence 333344567888996 6996 79999999999987755555544433 3455777665431 111111 11111
Q ss_pred eEE-EecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecC-CCCCCCcCccCCeeEEecCCCeEEEE
Q 005279 195 SAT-ILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVP-PPGIGAKDFRDPTTAWLTSEGKWRIA 272 (704)
Q Consensus 195 Sav-v~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~-p~g~~~~~fRDP~Vvw~~~~g~w~Mv 272 (704)
.+. ..+....||.|--.... -.-..+.|..+| ..|... .|++.. ..+. ....-|..|+- .+..-||+
T Consensus 80 ~vFYFaPk~~W~L~yQwg~~~----fsY~Ts~Dptnp--ngWSap--q~lf~g~i~~~-~~g~iD~~vI~--D~~n~yLF 148 (271)
T PF03664_consen 80 QVFYFAPKNIWYLAYQWGPAA----FSYSTSSDPTNP--NGWSAP--QPLFSGSISGS-GTGPIDQWVIC--DDTNMYLF 148 (271)
T ss_pred eEEEecCCcEEEEEEecCCCc----ceeecCCCCCCC--ccCCCC--cccccccccCC-CCCceeeEEEe--cCCceEEE
Confidence 111 25677788888522110 112345566665 457653 455432 1221 23457888775 23334555
Q ss_pred EeeecCCeeEEEEEEeCC-CCCc----EEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCCC
Q 005279 273 IGSRINRTGITFVYDTKD-FINY----ELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDR 347 (704)
Q Consensus 273 ~Gs~~~~~G~~llY~S~D-l~~W----~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~~ 347 (704)
.... + |. +|+|.- +-++ .-...+..........|.++.|+|.+. .+++|++..-+..
T Consensus 149 fa~D-n--Gk--iYRs~~~i~nFP~~fgs~~~vvmsd~~~nLFEA~~VYkv~G~-------------~~YLmiVEaiGs~ 210 (271)
T PF03664_consen 149 FAGD-N--GK--IYRSSMPIGNFPGGFGSSYTVVMSDTRNNLFEAVQVYKVKGQ-------------NQYLMIVEAIGSD 210 (271)
T ss_pred EcCC-C--Cc--EEEeccchhhCCCCCCCceEEEEecCccceeeeeEEEEEcCC-------------ceEEEEEEEecCC
Confidence 4432 2 44 588753 2221 100111111122348999999999752 2666666544433
Q ss_pred ceEEEEEEeeCCceeeecCC
Q 005279 348 HDYYAIGTYHEKNVTWVPDN 367 (704)
Q Consensus 348 ~~~Y~iG~~d~~~~~f~p~~ 367 (704)
+.||.-=+=..-.+.|+|..
T Consensus 211 gRyFRSfTa~sL~G~Wtp~A 230 (271)
T PF03664_consen 211 GRYFRSFTATSLDGPWTPQA 230 (271)
T ss_pred CcEEEeeecCCCCCcceecc
Confidence 33332211111124677653
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process |
| >cd08982 GH43_3 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.089 Score=56.60 Aligned_cols=135 Identities=17% Similarity=0.194 Sum_probs=73.9
Q ss_pred CCCCccCCCcceEE-CCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccc----cCCCCC----------CCcE
Q 005279 127 QKNWMNDPNGPVFY-KGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMV----ADQWYD----------IMGV 191 (704)
Q Consensus 127 ~~gWmNDPNG~~y~-~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~----Pd~~yD----------~~Gv 191 (704)
...+.-||+ ++.+ +|+.+|+|-.. .++ .-|+--.+.|+..=.-.+..+. |+..+. ..++
T Consensus 87 ~~~~~IDp~-vf~DdDGk~Yl~~g~~----~~~-~i~~~eL~~d~~~~~g~~~~l~~~~~~~~~We~~g~~~~~~~~~~~ 160 (295)
T cd08982 87 FPPGLADPA-LFIDDDGRLYLYYGCS----NNY-PLRGVEVDPDTFRPIGEPVELIPGNPDKHGWERFGENNDNPDKTPW 160 (295)
T ss_pred cCCCccCCc-eEECCCCCEEEEEecC----CCC-CeEEEEECcccCCccCcceEEEeCCCCCcCeEecCcccccccCCcc
Confidence 345677996 4554 59999998421 111 1244444445432111121111 111111 2346
Q ss_pred EeeeEEEecCCcEEEEEecccCC-ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEE
Q 005279 192 WTGSATILPDGKLMMLYTGSTNE-SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWR 270 (704)
Q Consensus 192 ~SGSavv~~dG~~~~~YTG~~~~-~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~ 270 (704)
.-|..++..+|+++|+|++.... ..-.+.+|+|++. +..|++...|||+..+.+. ...--...++ ...+|+|+
T Consensus 161 ~EGP~i~k~~G~YYL~yS~~~~~~~~Y~v~~a~s~~p----~GP~~~~~~~pil~~~~~~-~~g~GH~s~v-~~~~G~~~ 234 (295)
T cd08982 161 MEGAWMTKHNGKYYLQYAAPGTEFNTYADGVYVSDSP----LGPFTYQPHNPFSYKPGGF-ITGAGHGSTF-QDKYGNYW 234 (295)
T ss_pred ccccEEEEECCEEEEEEeCCCcccCcEeEEEEEeCCC----CCCCCcCCCCccccCCCCe-EecCCcccEE-ECCCCCEE
Confidence 77888888899999999865322 2235778888764 4567776678988654321 0011123333 35678888
Q ss_pred EEE
Q 005279 271 IAI 273 (704)
Q Consensus 271 Mv~ 273 (704)
++.
T Consensus 235 ~~y 237 (295)
T cd08982 235 HVG 237 (295)
T ss_pred EEE
Confidence 775
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure [] | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.21 Score=53.90 Aligned_cols=140 Identities=21% Similarity=0.307 Sum_probs=88.6
Q ss_pred CCCCCcccccccccceeecCCCCccCCCcc-----eEECCEEEEEEeeCCCCCCCCCcEEEEEEe-CCCcceeecc---c
Q 005279 108 YPWTNNMLSWQRTAFHFQPQKNWMNDPNGP-----VFYKGWYHLFYQYNPNGAIWGDIVWGHAVS-KDLIHWYHLP---L 178 (704)
Q Consensus 108 ~~~~~~~~~w~Rp~~Hf~P~~gWmNDPNG~-----~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS-~DLvhW~~lp---~ 178 (704)
..-+..++.|++...=+.|... .|.+|. +..++.+|+||.-+-... ...-..|+| .|.+||+..+ +
T Consensus 42 Ha~S~Dlv~W~~~~~aL~P~~~--~d~~g~~SGs~~~~~~~~~~~YTg~~~~~---~~~q~~A~s~d~~~~w~k~~~~~p 116 (308)
T PF00251_consen 42 HATSKDLVHWEHLPVALPPDEE--YDADGCFSGSAVVDDDNLVLFYTGNNRDG---KQVQCLAYSTDDGITWTKYPQGNP 116 (308)
T ss_dssp EEEESSSSSEEEEEEEE-SSSG--GGTTEEEEEEEEEETTCEEEEEEEEETTT---EEEEEEEEESSTTSSEEE-TTTCE
T ss_pred EEECCCCCCceeCCceEccccc--CCcCccCcceEEEECCEEEEEEeccCCCC---CeEEEEEEECCCCCceEEcCCCCc
Confidence 3445678899876666666643 366772 335789999998765421 345678999 8899999853 3
Q ss_pred ccccCCCCCCCcEEeeeEEEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCC
Q 005279 179 AMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDP 258 (704)
Q Consensus 179 AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP 258 (704)
.|......+..+.=...++...+|+++|+..+... ......+..|+| |++|+.. .++...... ....+--|
T Consensus 117 vi~~~p~~~~~~~RDP~v~~~~~~~~~m~~g~~~~-~~g~i~~y~S~D-----l~~W~~~--~~l~~~~~~-~g~~~ECP 187 (308)
T PF00251_consen 117 VIPEPPPGDTTDFRDPKVFWREDGRWYMLLGAGRD-GRGCILLYTSDD-----LIHWEYL--GPLFIPGDN-GGGMWECP 187 (308)
T ss_dssp SBESSSTTSCTSEEEEEEEEECTTEEEEEEEEEET-TEEEEEEEEESS-----SSSEEEE--EEESEEETT-TSSEEEEE
T ss_pred EEEecccCCCCccccCeEEEecCCEEEEEEecccc-CcceEEEEEcCC-----cccCcee--Ccccccccc-cccccccc
Confidence 34321112556677888866778999999877655 345566778877 5899886 344332221 12345567
Q ss_pred eeE
Q 005279 259 TTA 261 (704)
Q Consensus 259 ~Vv 261 (704)
-.+
T Consensus 188 dlf 190 (308)
T PF00251_consen 188 DLF 190 (308)
T ss_dssp EEE
T ss_pred eEE
Confidence 743
|
; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A .... |
| >cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.99 Score=48.67 Aligned_cols=142 Identities=11% Similarity=0.139 Sum_probs=75.4
Q ss_pred CCCcceEE--CCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcc---eeecccccccCCCCCCCcEEeeeEEEecCCcEEEE
Q 005279 133 DPNGPVFY--KGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIH---WYHLPLAMVADQWYDIMGVWTGSATILPDGKLMML 207 (704)
Q Consensus 133 DPNG~~y~--~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvh---W~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~ 207 (704)
-|. ++|+ +++|+||||+.+ ...++|+|..+ |...-........-...|...-.+ +.+|+++|||
T Consensus 80 APq-Vfyf~pk~kwYL~Yq~~~---------~~yaTs~dp~~P~~ws~~qpl~~~~~~~~~~~~ID~~v-I~Dd~~~YLf 148 (303)
T cd08987 80 APQ-VFYFAPQNKWYLIYQWWP---------AAYSTNSDISNPNGWSAPQPLFSGTPNGSPGGWIDFWV-ICDDTNCYLF 148 (303)
T ss_pred cCE-EeeeccCCEEEEEEecCc---------eEEEeCCCCCCCCccCCCcccccCcccCCCCCccceeE-EeCCCCEEEE
Confidence 564 5555 699999999732 45899999764 764322222111112234445555 6789999999
Q ss_pred EecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCC--eEEEEEeeecCCee-EEE
Q 005279 208 YTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEG--KWRIAIGSRINRTG-ITF 284 (704)
Q Consensus 208 YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g--~w~Mv~Gs~~~~~G-~~l 284 (704)
+.+.+. .+..|-... .+|-..-.+++....++-...-|-=|.| + +.+| +|+|++-+.....+ -..
T Consensus 149 f~~dnG----~iyra~~~~------~nFp~~~~~~~~~~~~~~~~~lfEa~~V-y-kv~G~~~YlmiveA~g~~~~rYfr 216 (303)
T cd08987 149 FSDDNG----KLYRSSTTL------GNFPNGGTETVIIMSDSNKNNLFEASNV-Y-KVKGQNQYLLIVEAIGSDGGRYFR 216 (303)
T ss_pred EecCCC----eEEEEecch------hhCCCCCCccEEEecCCCccccceeeEE-E-EECCCeEEEEEEEecCCCCCCeEE
Confidence 987542 233343222 1122111123222110111234566884 4 3445 99999977642112 222
Q ss_pred EEEeCCCC-CcEEe
Q 005279 285 VYDTKDFI-NYELL 297 (704)
Q Consensus 285 lY~S~Dl~-~W~~~ 297 (704)
-++|++|. .|+..
T Consensus 217 s~Ts~Sl~GpWt~~ 230 (303)
T cd08987 217 SWTATSLDGPWTPL 230 (303)
T ss_pred EEEcCCCCCCceec
Confidence 36777764 68865
|
The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr |
| >cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions | Back alignment and domain information |
|---|
Probab=94.02 E-value=9.3 Score=41.44 Aligned_cols=146 Identities=17% Similarity=0.175 Sum_probs=84.5
Q ss_pred CcEEEEEEeCC-CcceeecccccccCCCCCCCcEEeeeEEEecCCcEEEEEecccCC----------ceeeEEEEEeCCC
Q 005279 159 DIVWGHAVSKD-LIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNE----------SVQVQNLAYPADP 227 (704)
Q Consensus 159 ~~~WGHAvS~D-LvhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~----------~~q~q~lA~S~D~ 227 (704)
.+....++|+| ..+|... .++..... ....++.++.+.+.+|+++|||...... ....+.+.+|.|.
T Consensus 45 ~~~iv~~~S~D~G~tW~~~-~~i~~~~~-~~~~~~~p~~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~ 122 (351)
T cd00260 45 AIDIVARRSTDGGKTWSPS-TVISDGDG-KSSRVKDPTVVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDD 122 (351)
T ss_pred ccceeEEEeccCCCccccc-EEehhcCC-CCCcEEcceEEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcC
Confidence 56677788887 5899885 44444332 2356788888776559999999865431 2356778899887
Q ss_pred CCCccceeEeeCCCceecCC--CCCCCcCccCC--eeEEecCCCeEEEEEeeecC--CeeEEEEEEeCCCCCcEEeccee
Q 005279 228 SDPLLIKWVKYPGNPVLVPP--PGIGAKDFRDP--TTAWLTSEGKWRIAIGSRIN--RTGITFVYDTKDFINYELLRGVL 301 (704)
Q Consensus 228 ~D~~l~~W~K~~~nPVl~~p--~g~~~~~fRDP--~Vvw~~~~g~w~Mv~Gs~~~--~~G~~llY~S~Dl~~W~~~~~l~ 301 (704)
+ .+|.+. ..+.... ..+ ..-++-| -+. -++|+++|.+-.... ..-..++|..++.+.|++... .
T Consensus 123 G----~tW~~p--~~l~~~~~~~~~-~~~~~~~g~gi~--l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G~tW~~~~~-~ 192 (351)
T cd00260 123 G----ITWSSP--RDLTPSVKGDNW-AALFTGPGSGIQ--MKDGRLVFPVYGGNAGGRVSSAIIYSDDSGKTWKLGEG-V 192 (351)
T ss_pred C----ceecCC--ccCCccccCcce-eEEEecCcCeEE--ecCCcEEEEEEEEcCCCCEEEEEEEECCCCCCcEECCC-C
Confidence 6 899763 1222111 111 1112233 122 247888776654432 223455565666899986332 2
Q ss_pred ccCCCCCceeeeeeEEcC
Q 005279 302 HGVPNTGMWECVDFYPVS 319 (704)
Q Consensus 302 ~~~~~~gmWECPdlf~l~ 319 (704)
.. ..++.| |.+++++
T Consensus 193 ~~--~~~~~e-~~i~el~ 207 (351)
T cd00260 193 ND--AGGCSE-CSVVELS 207 (351)
T ss_pred CC--CCCCcC-CEEEEec
Confidence 21 134566 5677875
|
They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. |
| >PF13859 BNR_3: BNR repeat-like domain; PDB: 3B69_A | Back alignment and domain information |
|---|
Probab=92.27 E-value=0.63 Score=50.67 Aligned_cols=87 Identities=22% Similarity=0.460 Sum_probs=49.9
Q ss_pred eeEEEecCCcEEEEEecccCCce-eeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeE-EecCCCeEEE
Q 005279 194 GSATILPDGKLMMLYTGSTNESV-QVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTA-WLTSEGKWRI 271 (704)
Q Consensus 194 GSavv~~dG~~~~~YTG~~~~~~-q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vv-w~~~~g~w~M 271 (704)
||-|+.+||++++=-.+..++.. .+-.|-||+|.+ .+|+-..+ ......+||.|+ | ++|+-.|
T Consensus 124 GSGV~m~dGTLVFPv~a~~~~~~~~~SlIiYS~d~g----~~W~lskg---------~s~~gC~~psv~EW--e~gkLlM 188 (310)
T PF13859_consen 124 GSGVVMEDGTLVFPVQATKKNGDGTVSLIIYSTDDG----KTWKLSKG---------MSPAGCSDPSVVEW--EDGKLLM 188 (310)
T ss_dssp EE-EE-TTS-EEEEEEEEETT---EEEEEEEESSTT----SS-EE-S-------------TT-EEEEEEEE---TTEEEE
T ss_pred CCceEEcCCCEEEEEeeeccCccceEEEEEEECCCc----cceEeccc---------cCCCCcceEEEEec--cCCeeEE
Confidence 45566789999887777666555 367789999965 89986432 223456899987 6 5788777
Q ss_pred EEeeecCCeeEEEEEEeCCC-CCcEEec
Q 005279 272 AIGSRINRTGITFVYDTKDF-INYELLR 298 (704)
Q Consensus 272 v~Gs~~~~~G~~llY~S~Dl-~~W~~~~ 298 (704)
+.... .|.--+|+|.|. ..|+..-
T Consensus 189 ~~~c~---~g~rrVYeS~DmG~tWtea~ 213 (310)
T PF13859_consen 189 MTACD---DGRRRVYESGDMGTTWTEAL 213 (310)
T ss_dssp EEE-T---TS---EEEESSTTSS-EE-T
T ss_pred EEecc---cceEEEEEEcccceehhhcc
Confidence 75432 255568999885 6799733
|
|
| >COG3940 Predicted beta-xylosidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.06 E-value=3.8 Score=42.27 Aligned_cols=113 Identities=24% Similarity=0.379 Sum_probs=69.2
Q ss_pred CccCCCcceEECCE-EEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccc-cCCCCCCCcEE--eeeEEEecCCcEE
Q 005279 130 WMNDPNGPVFYKGW-YHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMV-ADQWYDIMGVW--TGSATILPDGKLM 205 (704)
Q Consensus 130 WmNDPNG~~y~~G~-YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~-Pd~~yD~~Gv~--SGSavv~~dG~~~ 205 (704)
+.=|-. .++++|+ |+++-|-.|.- -|+...-.|.-.+-.+-+-.|+.|. |.-+|+..|.| .|-||+..+|++.
T Consensus 131 fsldat-tfeh~gk~yyvwaqkdp~i--~gnsniyiaemenpwtikgepvmlskpe~dwe~~gfwvnegpav~k~ngkif 207 (324)
T COG3940 131 FSLDAT-TFEHNGKLYYVWAQKDPNI--KGNSNIYIAEMENPWTIKGEPVMLSKPELDWEIKGFWVNEGPAVLKKNGKIF 207 (324)
T ss_pred ceeeee-eeeeCCEEEEEEeccCCCc--cCCcceEEEeccCCceecCceEEecCCCcccEEEEEEecCCceEEEECCEEE
Confidence 333442 4667775 88888888853 3555555666555433344455443 44456667766 6888888999999
Q ss_pred EEEecccCCceeeEEEEEeCCCCCCc-cceeEeeCCCceecC
Q 005279 206 MLYTGSTNESVQVQNLAYPADPSDPL-LIKWVKYPGNPVLVP 246 (704)
Q Consensus 206 ~~YTG~~~~~~q~q~lA~S~D~~D~~-l~~W~K~~~nPVl~~ 246 (704)
+-|.+...+-.-+.+|-+....+|++ -.+|+|.+ .||+..
T Consensus 208 i~ysasatd~nycmgllwanen~dlldpaswtksp-tpvf~t 248 (324)
T COG3940 208 ITYSASATDVNYCMGLLWANENSDLLDPASWTKSP-TPVFKT 248 (324)
T ss_pred EEEeccccccceeeeeeeecccCCcCCchhcccCC-Ccceee
Confidence 99998654323344444443333221 16899974 788863
|
|
| >PTZ00334 trans-sialidase; Provisional | Back alignment and domain information |
|---|
Probab=86.69 E-value=5 Score=48.77 Aligned_cols=123 Identities=21% Similarity=0.355 Sum_probs=70.7
Q ss_pred CC-CcEEEEEEeC-----CCcceeecccccccCC-CCCC---CcEE--eeeEEEecCCcEEEEEecccCCceeeEEEEEe
Q 005279 157 WG-DIVWGHAVSK-----DLIHWYHLPLAMVADQ-WYDI---MGVW--TGSATILPDGKLMMLYTGSTNESVQVQNLAYP 224 (704)
Q Consensus 157 wG-~~~WGHAvS~-----DLvhW~~lp~AL~Pd~-~yD~---~Gv~--SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S 224 (704)
|+ ...+|+++-. .-|+|.+ +.+|.... .... .+.+ =||.|+..||++++=-.+..++...+-.+-||
T Consensus 215 ~~l~Lv~G~Vt~~~~~~~k~I~W~~-~~~l~~~~~~~~~~~l~~~iggGGSGI~medGTLVFPv~a~~~~g~~vslIiYS 293 (780)
T PTZ00334 215 WGLLVAVGNVSNDGSSGKKKIYWKD-ASVIPWTDFEKQHESLTRLIGGGGSGVQMKDGTLVFPVEGTKKDGKAVSLIIYS 293 (780)
T ss_pred CccEEEEEEeecCCCCCcceEECcC-cccCCccccccccccceeecCCCcCeEEecCCeEEEEEEEEcCCCCEEEEEEEe
Confidence 44 3666877632 2499977 33331111 1011 0110 14456678999887666655444445567899
Q ss_pred CCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeE-EecCCCeEEEEEeeecCCeeEEEEEEeCCC-CCcEEecc
Q 005279 225 ADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTA-WLTSEGKWRIAIGSRINRTGITFVYDTKDF-INYELLRG 299 (704)
Q Consensus 225 ~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vv-w~~~~g~w~Mv~Gs~~~~~G~~llY~S~Dl-~~W~~~~~ 299 (704)
+|.+ +|+-.. +....+.+||.|+ | ++|+-.|+.... .|.-.+|+|.|. ..|+..-.
T Consensus 294 ~d~g-----~W~ls~---------g~s~~gC~~P~I~EW--e~gkLlM~t~C~---dG~RrVYES~DmG~tWtEAlG 351 (780)
T PTZ00334 294 SATE-----SGNLSK---------GMSADGCSDPSVVEW--KEGKLMMMTACD---DGRRRVYESGDKGDSWTEALG 351 (780)
T ss_pred cCCC-----CeEEcC---------CCCCCCCCCCEEEEE--cCCeEEEEEEeC---CCCEEEEEECCCCCChhhCCC
Confidence 8863 485322 2233457999977 6 357777765433 255568999885 67986433
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 704 | ||||
| 3ugf_A | 546 | Crystal Structure Of A 6-Sst6-Sft From Pachysandra | 0.0 | ||
| 2ac1_A | 541 | Crystal Structure Of A Cell-Wall Invertase From Ara | 1e-129 | ||
| 2xqr_A | 537 | Crystal Structure Of Plant Cell Wall Invertase In C | 1e-129 | ||
| 2oxb_A | 537 | Crystal Structure Of A Cell-Wall Invertase (E203q) | 1e-129 | ||
| 2qqv_A | 537 | Crystal Structure Of A Cell-Wall Invertase (E203a) | 1e-128 | ||
| 2qqw_A | 537 | Crystal Structure Of A Cell-Wall Invertase (D23a) F | 1e-128 | ||
| 2qqu_A | 535 | Crystal Structure Of A Cell-Wall Invertase (D239a) | 1e-128 | ||
| 1st8_A | 543 | Crystal Structure Of Fructan 1-Exohydrolase Iia Fro | 1e-128 | ||
| 2aez_A | 543 | Crystal Structure Of Fructan 1-Exohydrolase Iia (E2 | 1e-127 | ||
| 1uyp_A | 432 | The Three-Dimensional Structure Of Beta-Fructosidas | 1e-37 | ||
| 1w2t_A | 432 | Beta-Fructosidase From Thermotoga Maritima In Compl | 4e-37 | ||
| 1y9m_A | 518 | Crystal Structure Of Exo-Inulinase From Aspergillus | 2e-29 | ||
| 3pig_A | 526 | Beta-Fructofuranosidase From Bifidobacterium Longum | 5e-25 | ||
| 3sc7_X | 516 | First Crystal Structure Of An Endo-Inulinase, From | 2e-23 | ||
| 3kf5_A | 512 | Structure Of Invertase From Schwanniomyces Occident | 5e-20 | ||
| 3kf3_A | 509 | Structure Of Fructofuranosidase From Schwanniomyces | 6e-20 | ||
| 3u75_A | 535 | Structure Of E230a-Fructofuranosidase From Schwanni | 6e-20 | ||
| 3u14_A | 535 | Structure Of D50a-Fructofuranosidase From Schwannio | 5e-19 | ||
| 4ffg_A | 492 | Crystal Structure Of Levan Fructotransferase From A | 7e-09 | ||
| 4fff_A | 490 | Crystal Structure Of Levan Fructotransferase From A | 7e-09 | ||
| 4ffh_A | 492 | Crystal Structure Of Levan Fructotransferase D54n M | 3e-08 |
| >pdb|3UGF|A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra Terminalis Length = 546 | Back alignment and structure |
|
| >pdb|2AC1|A Chain A, Crystal Structure Of A Cell-Wall Invertase From Arabidopsis Thaliana Length = 541 | Back alignment and structure |
|
| >pdb|2XQR|A Chain A, Crystal Structure Of Plant Cell Wall Invertase In Complex With A Specific Protein Inhibitor Length = 537 | Back alignment and structure |
|
| >pdb|2OXB|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203q) From Arabidopsis Thaliana In Complex With Sucrose Length = 537 | Back alignment and structure |
|
| >pdb|2QQV|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203a) From Arabidopsis Thaliana In Complex With Sucrose Length = 537 | Back alignment and structure |
|
| >pdb|2QQW|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D23a) From Arabidopsis Thaliana In Complex With Sucrose Length = 537 | Back alignment and structure |
|
| >pdb|2QQU|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D239a) From Arabidopsis Thaliana In Complex With Sucrose Length = 535 | Back alignment and structure |
|
| >pdb|1ST8|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From Cichorium Intybus Length = 543 | Back alignment and structure |
|
| >pdb|2AEZ|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia (E201q) From Cichorium Intybus In Complex With 1-Kestose Length = 543 | Back alignment and structure |
|
| >pdb|1UYP|A Chain A, The Three-Dimensional Structure Of Beta-Fructosidase (Invertase) From Thermotoga Maritima Length = 432 | Back alignment and structure |
|
| >pdb|1W2T|A Chain A, Beta-Fructosidase From Thermotoga Maritima In Complex With Raffinose Length = 432 | Back alignment and structure |
|
| >pdb|1Y9M|A Chain A, Crystal Structure Of Exo-Inulinase From Aspergillus Awamori In Spacegroup P212121 Length = 518 | Back alignment and structure |
|
| >pdb|3PIG|A Chain A, Beta-Fructofuranosidase From Bifidobacterium Longum Length = 526 | Back alignment and structure |
|
| >pdb|3SC7|X Chain X, First Crystal Structure Of An Endo-Inulinase, From Aspergillus Ficuum: Structural Analysis And Comparison With Other Gh32 Enzymes. Length = 516 | Back alignment and structure |
|
| >pdb|3KF5|A Chain A, Structure Of Invertase From Schwanniomyces Occidentalis Length = 512 | Back alignment and structure |
|
| >pdb|3KF3|A Chain A, Structure Of Fructofuranosidase From Schwanniomyces Occidentalis Complexed With Fructose Length = 509 | Back alignment and structure |
|
| >pdb|3U75|A Chain A, Structure Of E230a-Fructofuranosidase From Schwanniomyces Occidentalis Complexed With Fructosylnystose Length = 535 | Back alignment and structure |
|
| >pdb|3U14|A Chain A, Structure Of D50a-Fructofuranosidase From Schwanniomyces Occidentalis Complexed With Inulin Length = 535 | Back alignment and structure |
|
| >pdb|4FFG|A Chain A, Crystal Structure Of Levan Fructotransferase From Arthrobacter Ureafaciens In Complex With Dfa-Iv Length = 492 | Back alignment and structure |
|
| >pdb|4FFF|A Chain A, Crystal Structure Of Levan Fructotransferase From Arthrobacter Ureafaciens Length = 490 | Back alignment and structure |
|
| >pdb|4FFH|A Chain A, Crystal Structure Of Levan Fructotransferase D54n Mutant From Arthrobacter Ureafaciens In Complex With Sucrose Length = 492 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 704 | |||
| 3ugf_A | 546 | Sucrose:(sucrose/fructan) 6-fructosyltransferase; | 0.0 | |
| 1st8_A | 543 | Fructan 1-exohydrolase IIA; five fold beta propell | 0.0 | |
| 2ac1_A | 541 | Invertase; five fold beta propeller, hydrolase; HE | 0.0 | |
| 1y4w_A | 518 | EXO-inulinase; glycoside hydrolase FAMI crystallog | 0.0 | |
| 3sc7_X | 516 | Inulinase; glycoside hydrolase family 32, glycosyl | 1e-175 | |
| 3pij_A | 526 | Beta-fructofuranosidase; five-bladed beta-propelle | 1e-173 | |
| 4ffh_A | 492 | Levan fructotransferase; glycoside hydrolase; HET: | 1e-161 | |
| 3kf3_A | 509 | Invertase; GH32, glycoprotein, glycosidase, hydrol | 1e-156 | |
| 1w2t_A | 432 | Beta fructosidase; hydrolase, glycosidase, inverta | 1e-148 | |
| 3lig_A | 634 | Fructosyltransferase; five bladed beta-propeller f | 1e-130 | |
| 3p2n_A | 408 | 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-p | 2e-16 | |
| 4ak5_A | 404 | Anhydro-alpha-L-galactosidase; hydrolase, marine g | 6e-13 | |
| 3r4z_A | 374 | Glycosyl hydrolase family 32, N terminal; AGAR met | 7e-13 | |
| 3qc2_A | 364 | Glycosyl hydrolase; 5-bladed beta propeller fold, | 6e-10 | |
| 3qc2_A | 364 | Glycosyl hydrolase; 5-bladed beta propeller fold, | 3e-05 | |
| 3taw_A | 356 | Hypothetical glycoside hydrolase; 5-bladed beta-pr | 2e-09 | |
| 3taw_A | 356 | Hypothetical glycoside hydrolase; 5-bladed beta-pr | 2e-04 | |
| 2yfr_A | 571 | Levansucrase, inulosucrase; fructosyltransferase, | 6e-08 | |
| 1oyg_A | 447 | Levansucrase; glycoside hydrolase, beta-propeller, | 3e-06 | |
| 1vkd_A | 338 | Conserved hypothetical protein TM1225; structural | 3e-04 |
| >3ugf_A Sucrose:(sucrose/fructan) 6-fructosyltransferase; glycoside hydrolase family 32; HET: NAG FUC BMA MAN; 1.70A {Pachysandra terminalis} PDB: 3ugg_A* 3ugh_A* Length = 546 | Back alignment and structure |
|---|
Score = 728 bits (1880), Expect = 0.0
Identities = 349/561 (62%), Positives = 437/561 (77%), Gaps = 17/561 (3%)
Query: 101 FGSRTASYPWTNNMLSWQRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDI 160
F YPW+N LSWQRTAFHFQP+++WM+DP+GP+FYKGWYH FYQYNP+ +WG+
Sbjct: 1 FPDNAVPYPWSNAQLSWQRTAFHFQPERSWMSDPDGPIFYKGWYHFFYQYNPDNPVWGNN 60
Query: 161 VWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQN 220
WGH VS+DLIHW +LPLA+ ADQWYD+ GV++GSAT LPDG++MMLYTG T E V++ +
Sbjct: 61 TWGHTVSRDLIHWLYLPLALAADQWYDMQGVFSGSATCLPDGRIMMLYTGVTKEMVEMLS 120
Query: 221 LAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRT 280
LAYPAD SDPLL++WVKYPGNP+L PPG+ +FRD +T W S G WRIAIG++ N T
Sbjct: 121 LAYPADLSDPLLVEWVKYPGNPILSAPPGVSPTEFRDASTGWYVSNGTWRIAIGAKYNTT 180
Query: 281 GITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVK 340
GI VY+TKDF +++LL +LH VP+TG+WECVD YPVSTTGE GL+TS NGP VKHV+K
Sbjct: 181 GIAMVYETKDFKSFKLLEELLHAVPDTGLWECVDLYPVSTTGEKGLETSVNGPKVKHVLK 240
Query: 341 ASMDDDRHDYYAIGTYHEKNVTWVPDNPEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLW 400
AS+D+ + DYYAIGTY W PDNPE DVGIG+RYD+G +YASKTFYD K+RRV+W
Sbjct: 241 ASIDEQQRDYYAIGTYDLGTNKWTPDNPEEDVGIGLRYDWGKYYASKTFYDPKKQRRVVW 300
Query: 401 GWIGESDSEIADVKKGWASLQGIPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIEL 460
W E DSE+AD +KGWA++Q IPRTV LD KTG+N+L WPVEEV+SLRL+SKEF K++
Sbjct: 301 AWTKELDSEVADREKGWANVQTIPRTVLLDQKTGTNVLLWPVEEVESLRLSSKEFSKVKA 360
Query: 461 KPGSVMPLDVGSATQLDIVAEFELDKAALEKTAESNVEFSCSSSEGSAERGALGPFGLLV 520
GSV+PLDVG+ATQLDI+AEFE+DK ALE T E+++ ++C++S G+AERG LGPFGLLV
Sbjct: 361 GAGSVVPLDVGTATQLDIIAEFEIDKEALEGTIEADMGYNCTTSGGAAERGVLGPFGLLV 420
Query: 521 LADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSSTGRREILNESIGEHISCYCPNEHMYM 580
A ++LSEQTPVYFYIAKG DG+ KT+FC D+S + + +++ + E M
Sbjct: 421 SATENLSEQTPVYFYIAKGTDGNFKTFFCLDESRSSKASDVSKQVKGFTVPVLDGEKFTM 480
Query: 581 LALSIESSQSIWNIVYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNAT 640
L VDHSIVE FAQGGR+ ITSRVYPT+AIYGAA++FLFNNAT
Sbjct: 481 -----------------RLLVDHSIVESFAQGGRSCITSRVYPTEAIYGAAKLFLFNNAT 523
Query: 641 GASVTSSLKAWQMNSAFIRPY 661
GAS+T+SLK W+MNSAFI+P+
Sbjct: 524 GASITASLKIWEMNSAFIQPF 544
|
| >1st8_A Fructan 1-exohydrolase IIA; five fold beta propeller; HET: NDG NAG MAN; 2.35A {Cichorium intybus} PDB: 2add_A* 2ade_A* 2aey_A* 2aez_A* Length = 543 | Back alignment and structure |
|---|
Score = 673 bits (1739), Expect = 0.0
Identities = 232/555 (41%), Positives = 316/555 (56%), Gaps = 24/555 (4%)
Query: 114 MLSWQRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGD-IVWGHAVSKDLIH 172
+ RT +HFQP NWMNDPNGP+ Y+G YH FYQYNP A +GD I+WGHAVS DL++
Sbjct: 3 IEQPYRTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLVN 62
Query: 173 WYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLL 232
W HL A+ Q D W+GSATILP MLYTGS ++S QVQ+LA+P + SDP L
Sbjct: 63 WIHLDPAIYPTQEADSKSCWSGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFL 122
Query: 233 IKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFI 292
+WVK+P NP++ PP G+ FRDP+TAWL +G WRI +G + G+ F+Y + DF+
Sbjct: 123 REWVKHPKNPLITPPEGVKDDCFRDPSTAWLGPDGVWRIVVGGDRDNNGMAFLYQSTDFV 182
Query: 293 NYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYA 352
N++ L TG WEC DFYPV +GLDTS G V+HV+KA + HD+Y
Sbjct: 183 NWKRYDQPLSSADATGTWECPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGF--EGHDWYT 240
Query: 353 IGTYHEKNVTWVPDNPEIDVG--IGIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEI 410
IGTY ++P N G + +RYDYG FYASK+F+D K RRVLW W+ E+DS+
Sbjct: 241 IGTYSPDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQA 300
Query: 411 ADVKKGWASLQGIPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDV 470
D++KGWA LQ PR + +D + G L+QWPVEE++ LR + LKPGSV+ +
Sbjct: 301 DDIEKGWAGLQSFPRALWID-RNGKQLIQWPVEEIEELRQNQVNLQNKNLKPGSVLEIHG 359
Query: 471 GSATQLDIVAEFELD--KAALEKTAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSE 528
+A+Q D+ F+L+ K A + + G++ RGALGPFGLL +A L E
Sbjct: 360 IAASQADVTISFKLEGLKEAEVLDTTLVDPQALCNERGASSRGALGPFGLLAMASKDLKE 419
Query: 529 QTPVYFYIAKGKDGSLKTYFCTDQSSTGRREILNESIGEHISCYCPNEHMYMLALSIESS 588
Q+ ++F + + + G C+D S + R ++ + P L
Sbjct: 420 QSAIFFRVFQNQLGRYSVLMCSDLSRSTVRSNIDTTSYGAFVDIDPRSEEISL------- 472
Query: 589 QSIWNIVYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSL 648
+DHSI+E F GG+T ITSR+YP A +F+FNN T S +
Sbjct: 473 ---------RNLIDHSIIESFGAGGKTCITSRIYPKFVNNEEAHLFVFNNGTQNVKISEM 523
Query: 649 KAWQMNSAFIRPYPD 663
AW M +A
Sbjct: 524 SAWSMKNAKFVVDQS 538
|
| >2ac1_A Invertase; five fold beta propeller, hydrolase; HET: NAG MAN; 2.15A {Arabidopsis thaliana} PDB: 2xqr_A* 2oxb_A* 2qqw_A* 2qqv_A* 2qqu_A* Length = 541 | Back alignment and structure |
|---|
Score = 662 bits (1708), Expect = 0.0
Identities = 250/559 (44%), Positives = 336/559 (60%), Gaps = 30/559 (5%)
Query: 111 TNNMLSWQRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDL 170
+ ++ RT FHFQP KNWMNDPNGP+ YKG YHLFYQ+NP GA+WG+IVW H+ S DL
Sbjct: 1 SPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDL 60
Query: 171 IHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDP 230
I+W P A+ +DI G W+GSATILP+GK ++LYTG ++ QVQN+A P + SDP
Sbjct: 61 INWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDP 120
Query: 231 LLIKWVKYPGNPVLVPPP--GIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDT 288
L +W K P NP++ P GI A FRDPTTAWL + KWR+ IGS+I+R G+ Y +
Sbjct: 121 YLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTS 180
Query: 289 KDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGP---GVKHVVKASMDD 345
KDF+ +E LH +GMWEC DF+PV+ G +G++TS G +KHV+K S+DD
Sbjct: 181 KDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDD 240
Query: 346 DRHDYYAIGTYHEKNVTWVPDNPEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGE 405
+HDYY IGTY +VPDN G RYDYG +YASKTF+D K RR+LWGW E
Sbjct: 241 TKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNE 300
Query: 406 SDSEIADVKKGWASLQGIPRTVALDTKTGSNLLQWPVEEVDSLRLTS-KEFKKIELKPGS 464
S S DV+KGW+ +Q IPR + LD ++G L+QWPV EV+ LR K + LK GS
Sbjct: 301 SSSVEDDVEKGWSGIQTIPRKIWLD-RSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGS 359
Query: 465 VMPLDVGSATQLDIVAEFE---LDKAALEKTAESNVEFSCSSSEGSAERGALGPFGLLVL 521
+ + +A Q D+ F+ L+KA + + + ++ + CS + + LGPFGL+VL
Sbjct: 360 RLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKM-NVSVKSGLGPFGLMVL 418
Query: 522 ADDSLSEQTPVYFYIAKGKDGSLK--TYFCTDQSSTGRREILNESIGEHISCYCPNEHMY 579
A +L E T VYF I K + S K C+DQS + +E +++ P++
Sbjct: 419 ASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQP-- 476
Query: 580 MLALSIESSQSIWNIVYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNA 639
L+L +DHS+VE F GR ITSRVYP AI ++ +F FN
Sbjct: 477 -LSLRAL--------------IDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYG 521
Query: 640 TGASVTSSLKAWQMNSAFI 658
+ +L AW MNSA I
Sbjct: 522 YQSVDVLNLNAWSMNSAQI 540
|
| >1y4w_A EXO-inulinase; glycoside hydrolase FAMI crystallographic structure, native structure, hydrolase; HET: NAG; 1.55A {Aspergillus awamori} SCOP: b.29.1.19 b.67.2.3 PDB: 1y9g_A* 1y9m_A* Length = 518 | Back alignment and structure |
|---|
Score = 540 bits (1394), Expect = 0.0
Identities = 130/581 (22%), Positives = 211/581 (36%), Gaps = 101/581 (17%)
Query: 113 NMLSWQRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIH 172
N R +HF PQKNWMNDPNG +++ G YHLF+QYNP G WG+I WGHA+S+DL H
Sbjct: 2 NYDQPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTH 61
Query: 173 WYHLPLAMVADQWYDIM--GVWTGSATILPDGK----------LMMLYTG---------- 210
W P+A++A + + ++GSA + L+ +YT
Sbjct: 62 WEEKPVALLARGFGSDVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPS 121
Query: 211 --STNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPG---IGAKDFRDPTTAWLTS 265
+ E Q Q++AY D L NPV+ PP ++FRDP W
Sbjct: 122 GQTVQEDQQSQSIAY---SLDDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDE 178
Query: 266 EGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHG 325
KW + I +Y + + +++L+ G+WEC +
Sbjct: 179 SQKWVVVTS--IAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDS--- 233
Query: 326 LDTSHNGPGVKHVVKASMDDD-------RHDYYAIGTYHEKNVTWVPDNPEIDVGIGIRY 378
G K V+ + ++ Y +G + T D
Sbjct: 234 ------GNSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGTTFTPDADTVYPGNSTANWM 287
Query: 379 DYGL-FYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQGIPRTVALDT-KTGSN 436
D+G FYA+ + + V GW+ W S IPR +AL T + +
Sbjct: 288 DWGPDFYAAAGYNGLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKAT 347
Query: 437 LLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVAEFELDKAALEKTAESN 496
L+Q P E S+ + + + + F
Sbjct: 348 LVQQPQEAWSSISNKRPIYSRTFKTLSEGSTNTTTTGETFKVDLSFSA------------ 395
Query: 497 VEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSSTG 556
+ F + + A + +EQT V + AK + D++ +G
Sbjct: 396 -------------KSKASTFAIALRASANFTEQTLVGYDFAKQQ-------IFLDRTHSG 435
Query: 557 RREILNESIGEHISCYCPNEHMYMLALSIESSQSIWNIVYVYLQVDHSIVEGFAQGGRTT 616
+E+ + ++ LSI VD S VE F G TT
Sbjct: 436 DVS-FDETFASVYHGPLTPDSTGVVKLSI-------------F-VDRSSVEVFGGQGETT 480
Query: 617 ITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNSAF 657
+T++++P+ A L + G + +++ S +
Sbjct: 481 LTAQIFPSS---DAVHARLASTG-GTTEDVRADIYKIASTW 517
|
| >3sc7_X Inulinase; glycoside hydrolase family 32, glycosylation cytosol, hydrolase; HET: MAN NAG EPE; 1.50A {Aspergillus ficuum} Length = 516 | Back alignment and structure |
|---|
Score = 509 bits (1313), Expect = e-175
Identities = 117/584 (20%), Positives = 204/584 (34%), Gaps = 110/584 (18%)
Query: 101 FGSRTASYPWTNNMLSWQRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDI 160
+ + + + R ++HF P + WMN+PNG + +HLF+Q+NP +WG+I
Sbjct: 11 WMTCLGLTLPSQAQSNDYRPSYHFTPDQYWMNEPNGLIKIGSTWHLFFQHNPTANVWGNI 70
Query: 161 VWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDG----------KLMMLYTG 210
WGHA S DL+HW H P A+ + + +TG+A P+ + +TG
Sbjct: 71 CWGHATSTDLMHWAHKPTAIADENGVEA---FTGTAYYDPNNTSGLGDSANPPYLAWFTG 127
Query: 211 STNES-VQVQNLAYPADPSDPLLIKWVKYPGNPVL-----VPPPGIGAKDFRDPTTAWLT 264
T S Q Q LA+ D W K+ GNP++ P G + RDP +
Sbjct: 128 YTTSSQTQDQRLAFSVDNG----ATWTKFQGNPIISTSQEAPHDITGGLESRDPKVFFHR 183
Query: 265 SEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLHGVPN-----TGMWECVDFYPVS 319
G W + + + + D IN+ + N WE D + +
Sbjct: 184 QSGNWIMVLAHG--GQDKLSFWTSADTINWTWQSDLKSTSINGLSSDITGWEVPDMFELP 241
Query: 320 TTGEHGLDTSHNGPGVKHVVKAS-----MDDDRHDYYAIGTYHEKNVTWVPDNPEIDVGI 374
G VV + G++ K+ T P +
Sbjct: 242 VEGT---------EETTWVVMMTPAEGSPAGGNGVLAITGSFDGKSFTADPVDASTM--- 289
Query: 375 GIRYDYGL-FYASKTFYD--QNKKRRVLWGWIGESDSEIADVKKGWASLQGIPRTVALDT 431
D G F + ++ + + RR++ + S W + PRT++L
Sbjct: 290 --WLDNGRDFDGALSWVNVPASDGRRIIAAVMNSYGSNPPT--TTWKGMLSFPRTLSLKK 345
Query: 432 -KTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVAEFELDKAALE 490
T + +Q P+ E+D++ + + + PG + + T LD+ F D
Sbjct: 346 VGTQQHFVQQPITELDTISTSLQILANQTITPGQTLLSSI-RGTALDVRVAFYPDAG--- 401
Query: 491 KTAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCT 550
L V SEQT + + +
Sbjct: 402 -----------------------SVLSLAVRKGA--SEQTVIKYTQSDAT-------LSV 429
Query: 551 DQSSTGRREILNESIGEHISCYCPNEHMYMLALSIESSQSIWNIVYVYLQVDHSIVEGFA 610
D++ +G + G H + + ++++ + L VD VE F
Sbjct: 430 DRTESGDISYDPAAGGVH-TAKLEEDGTGLVSIRV-------------L-VDTCSVEVFG 474
Query: 611 QGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMN 654
G I+ ++P+ + G A NA S+ ++
Sbjct: 475 GQGEAVISDLIFPSDSSDGLALEVTGGNAVL----QSVDVRSVS 514
|
| >3pij_A Beta-fructofuranosidase; five-bladed beta-propeller and beta-sandwich domains, glycos hydrolase family 32, probiotic bacteria, fructose; HET: FRU; 1.80A {Bifidobacterium longum} PDB: 3pig_A* Length = 526 | Back alignment and structure |
|---|
Score = 505 bits (1303), Expect = e-173
Identities = 116/556 (20%), Positives = 199/556 (35%), Gaps = 90/556 (16%)
Query: 119 RTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPL 178
+H W+NDPNG FYKG +H+FYQ +P G WG + WGH S D+++W P+
Sbjct: 40 YPKYHIASNGGWINDPNGLCFYKGRWHVFYQLHPYGTQWGPMHWGHVSSTDMLNWKREPI 99
Query: 179 AMVADQWYDIMGVWTGSATILPDGKLMMLYTG--------STNESVQVQNLAYPADPSDP 230
+ GV++GSA I +G L YTG +T QVQ A P +
Sbjct: 100 MFAPSLEQEKDGVFSGSAVIDDNGDLRFYYTGHRWANGHDNTGGDWQVQMTALPDND--- 156
Query: 231 LLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSR-INRTGITFVYDTK 289
++ P +RDP + W + G ++ G +++ +K
Sbjct: 157 --ELTSATKQGMIIDCPTDKVDHHYRDPKVWK--TGDTWYMTFGVSSADKRGQMWLFSSK 212
Query: 290 DFINYELLRGVL-HGVPNTGMWECVDFYPVS---TTGEHGLDTSHNGPGVKHVVKASMDD 345
D + +E R + H P+ M EC DF P+ + + S G + ++
Sbjct: 213 DMVRWEYERVLFQHPDPDVFMLECPDFSPIKDKDGNEKWVIGFSAMGSKPSGFMNRNVS- 271
Query: 346 DRHDYYAIGTYHEKNVTWVPDNPEIDVGIGIRYDYGL-FYASKTFYDQNKKRRVLWGWIG 404
+ Y IGT+ + P+ +D G +YA ++F R++++GW+
Sbjct: 272 --NAGYMIGTWEPGG-EFKPETE------FRLWDCGHNYYAPQSFNVDG--RQIVYGWMS 320
Query: 405 ESDSEIADVKKGWASLQGIPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGS 464
I GW +PR + L +++ PV E++ LR + + + L
Sbjct: 321 PFVQPIPMEDDGWCGQLTLPREITLGDDG--DVVTAPVAEMEGLREDTLDHGSVTLDMDG 378
Query: 465 VMPLDVGSATQLDIVAEFELDKAALEKTAESNVEFSCSSSEGSAERGALGPFGLLVLADD 524
+ A ++I +L GL + A +
Sbjct: 379 E-QIIADDAEAVEIEMTIDLAA------------------------STAERAGLKIHATE 413
Query: 525 SLSEQTPVYFYIAKGKDGSLKTYFCTDQSSTGRREILNESIGEHISCYCPNEHMYMLALS 584
T V + DG + D+ + + + + + +
Sbjct: 414 D-GAYTYVAY------DGQIGR-VVVDRQAMANGDRGYRAAPLT-DAELASGKLDLRVF- 463
Query: 585 IESSQSIWNIVYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASV 644
VD VE + GG ++S Y ++ G + L + V
Sbjct: 464 ----------------VDRGSVEVYVNGGHQVLSSYSYASE---GPRAIKLVAESGSLKV 504
Query: 645 TSSLKAWQMNSAFIRP 660
SLK M S +
Sbjct: 505 -DSLKLHHMKSIGLEL 519
|
| >4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A Length = 492 | Back alignment and structure |
|---|
Score = 473 bits (1218), Expect = e-161
Identities = 103/572 (18%), Positives = 175/572 (30%), Gaps = 119/572 (20%)
Query: 121 AFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAM 180
+H P W+ +P PV G Y L+Y ++ G W HA + D + + H M
Sbjct: 3 VYHMTPPSGWLCNPQRPVTTHGAYQLYYLHSDQN--NGPGGWDHASTTDGVAFTHHGTVM 60
Query: 181 VADQWYDIMGVWTGSATILPDGKLMMLYTGST----------NESVQVQNLAYPADP--- 227
+ + W+GSA + G+ Q Q L + D
Sbjct: 61 PLRPDFPV---WSGSAVVD-TANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDGGFT 116
Query: 228 ----SDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGIT 283
DP+++ G P A+ FRDP W T+ G+W IG
Sbjct: 117 FTALPDPVIVNT---DGRAATTPAEIENAEWFRDPKIHWDTARGEWVCVIGRL----RYA 169
Query: 284 FVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASM 343
Y + + ++ L R + G EC D + ++ + V+ ASM
Sbjct: 170 AFYTSPNLRDWTLRRNFDYPNHALGGIECPDLFEITA----------DDGTRHWVLAASM 219
Query: 344 DDDRHDY-----YAIGTYHEKNVTWVPDNPEIDVGIGIRYDYGL-FYASKTF--YDQNKK 395
D Y GT W + D D+G +YA+ T+ D +
Sbjct: 220 DAYGIGLPMTYAYWTGT-------WDGEQFHADDLTPQWLDWGWDWYAAVTWPSIDAPET 272
Query: 396 RRVLWGWIGESDSEIADV----KKGWASLQGIPRTVALDTKTGS--NLLQWPVEEVDSLR 449
+R+ W+ DV G+ I R + L + G LL PV + +
Sbjct: 273 KRLAIAWMNNWKYAARDVPTDASDGYNGQNSIVRELRLARQPGGWYTLLSTPVAALTNYV 332
Query: 450 LTSKEFKKIELKPGSVMPLDVGSATQLDIVAEFELDKAALEKTAESNVEFSCSSSEGSAE 509
+ + +V+P + +I + D A
Sbjct: 333 TATTTLPDRTVDGSAVLPWN---GRAYEIELDIAWDTA---------------------- 367
Query: 510 RGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSSTGRREILNESIGEHI 569
G+ V + T + Y D+ +
Sbjct: 368 ----TNVGISVGRSPDGTRHTNIGKY---------GADLYVDRGPSDLAGYSLAPYSRAA 414
Query: 570 SCYCPNEHMYMLALSIESSQSIWNIVYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYG 629
+ P L I+ VD VE F G T ++ +V+ + G
Sbjct: 415 APIDPGARSVHL-----------RIL-----VDTQSVEVFVNAGHTVLSQQVHFAE---G 455
Query: 630 AARVFLFNNATGASVTSSLKAWQMNSAFIRPY 661
+ L+ + A T + ++ A + +
Sbjct: 456 DTGISLYTDGGPAHFT-GIVVREIGQAILEHH 486
|
| >3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A* Length = 509 | Back alignment and structure |
|---|
Score = 461 bits (1187), Expect = e-156
Identities = 105/570 (18%), Positives = 200/570 (35%), Gaps = 99/570 (17%)
Query: 116 SWQRTAFHFQPQKNWMNDPNGPVFYK--GWYHLFYQYNPNGAIWGD-IVWGHAVSKDLIH 172
+ R HF P+K WMNDPNG + K +HL++QYNPN WG + WGHA S DL+H
Sbjct: 7 EYNRPLIHFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATSNDLVH 66
Query: 173 WYHLPLAMVADQWYDIMGVWTGSATILPDG-------------KLMMLYTGSTNESVQVQ 219
W +A+ + +D G+++GS + + +++ +YT + ++ Q Q
Sbjct: 67 WDEHEIAIGPE--HDNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIPDN-QTQ 123
Query: 220 NLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINR 279
++A+ D + KY NPV + + FRDP W +W + + ++
Sbjct: 124 DIAFSLDGG----YTFTKYENNPV----IDVSSNQFRDPKVFWHEDSNQWIMVVSK--SQ 173
Query: 280 TGITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVV 339
++ + + N+ L +EC V K V+
Sbjct: 174 EYKIQIFGSANLKNWVLN-SNFSSGYYGNQYECPGLIEVPIEN---------SDKSKWVM 223
Query: 340 KAS-----MDDDRHDYYAIGTYHEKNVTWVPDNPEIDVGIGIRYDYGL-FYASKTFYDQN 393
+ + Y +G + +VPD+ + D G FYA +TF +
Sbjct: 224 FLAINPGSPLGGSINQYFVGDFDGF--QFVPDDSQTR-----FVDIGKDFYAFQTFSEV- 275
Query: 394 KKRRVLWGWIGESDSEIADVKKGWASLQGIPRTVALDT------KTGSNLLQWPVEEVDS 447
+ + W W S + R L L+Q PV
Sbjct: 276 EHGVLGLAWASNWQYADQVPTNPWRSSTSLARNYTLRYVHTNAETKQLTLIQNPVLPDSI 335
Query: 448 LRLTSKEFKKIELKPGSVMPLDV-GSATQLDIVAEFELDKAALEKTAESNVEFSCSSSEG 506
+ + K ++L + + GS D F++ +
Sbjct: 336 NVVDKLKKKNVKLTNKKPIKTNFKGSTGLFDFNITFKVLNLNVSPGK------------- 382
Query: 507 SAERGALGPFGLLVLADDSLS--EQTPVYFYIAKGKDGSLKTYFCTDQSSTGRREILNES 564
F +L+ + + S + + F ++ F D+ +
Sbjct: 383 -------THFDILINSQELNSSVDSIKIGFDSSQSS-------FYIDRHIPNVEFPRKQF 428
Query: 565 IGEHISCYCPNEHMYMLALSIESSQSIWNIVYVYLQVDHSIVEGFAQGGRTTITSRVYPT 624
+ ++ Y + L + +++ +Y VD +I+E + G +T+ +
Sbjct: 429 FTDKLAAY-------LEPLDYDQDLRVFS---LYGIVDKNIIELYFNDGTVAMTNTFFMG 478
Query: 625 KAIYGAARVFLFNNATGASVTSSLKAWQMN 654
+ Y + + S+ ++N
Sbjct: 479 EGKYPHDIQIVTDTEEPLFELESVIIRELN 508
|
| >1w2t_A Beta fructosidase; hydrolase, glycosidase, invertase, raffinose; HET: SUC GLA CIT; 1.87A {Thermotoga maritima} SCOP: b.29.1.19 b.67.2.3 PDB: 1uyp_A* Length = 432 | Back alignment and structure |
|---|
Score = 437 bits (1126), Expect = e-148
Identities = 126/549 (22%), Positives = 215/549 (39%), Gaps = 128/549 (23%)
Query: 119 RTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPL 178
+ +HF P WMNDPNG +F+KG YH+FYQYNP WG+I WGHAVS DL+HW HLP+
Sbjct: 3 KPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPV 62
Query: 179 AMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNES-----VQVQNLAYPADPSDPLLI 233
A+ D + GV++GSA + DGK+ ++YT + + + Q + + +
Sbjct: 63 ALYPDD--ETHGVFSGSA-VEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSEN-----GL 114
Query: 234 KWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI-NRTGITFVYDTKDFI 292
+VKY GNPV+ PP G FRDP S G+WR+ +GS + G +Y + D
Sbjct: 115 DFVKYDGNPVISKPPEEGTHAFRDPKVNR--SNGEWRMVLGSGKDEKIGRVLLYTSDDLF 172
Query: 293 NYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYA 352
+++ G + T +C D + G K ++ S+ ++
Sbjct: 173 HWKYE-GAIFEDETTKEIDCPDLVRI---------------GEKDILIYSITSTNSVLFS 216
Query: 353 IGTYHEKNVTWVPDNPEIDVGIGIRYDYGL-FYASKTFYDQNKKRRVLWGWIGE--SDSE 409
+G +++V D+G FYA++TF+ + R V+ GW+
Sbjct: 217 MGEL---------KEGKLNVEKRGLLDHGTDFYAAQTFFGTD--RVVVIGWLQSWLRTGL 265
Query: 410 IADVKKGWASLQGIPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLD 469
++GW + +PR + ++ + L PV+E+ +LR +K+ S L
Sbjct: 266 YPTKREGWNGVMSLPRELYVE---NNELKVKPVDELLALRK-----RKVFETAKSGTFLL 317
Query: 470 VGSATQLDIVAEFELDKAALEKTAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQ 529
+IV EF +E +E
Sbjct: 318 DVKENSYEIVCEF-----------SGEIELRMG------------------------NES 342
Query: 530 TPVYFYIAKGKDGSLKTYFCTDQSSTGRREILNESIGEHISCYCPNEHMYMLALSIESSQ 589
V ++ + D + +G GE +E +
Sbjct: 343 EEVVITKSRDE-------LIVDTTRSGVSG------GEVRKSTVEDEATNRI-------- 381
Query: 590 SIWNIVYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLK 649
+D VE F + R++P + + +N L+
Sbjct: 382 ---RAF-----LDSCSVEFFFNDS-IAFSFRIHPENV---YNILSVKSN------QVKLE 423
Query: 650 AWQMNSAFI 658
+++ + ++
Sbjct: 424 VFELENIWL 432
|
| >3lig_A Fructosyltransferase; five bladed beta-propeller fold, hydrolase; 1.80A {Aspergillus japonicus} PDB: 3ldk_A* 3lem_A* 3ldr_A 3lih_A* 3lf7_A 3lfi_A* Length = 634 | Back alignment and structure |
|---|
Score = 398 bits (1024), Expect = e-130
Identities = 94/640 (14%), Positives = 182/640 (28%), Gaps = 122/640 (19%)
Query: 112 NNMLSWQRTAFHFQPQKNWMNDPNGPVF--YKGWYHLFYQYNPNGAIWGDIVWGHAVSKD 169
N + R H P + + DP G +H+ + ++ +G A + +
Sbjct: 20 NTLFHLWRPRAHILPAEGQIGDPCAHYTDPSTGLFHVGFLHDGDG-------IAGATTAN 72
Query: 170 LIHWYHL----PLAMVADQWYDIMGVWTGSAT-ILPDGKLMMLYTGST----------NE 214
L + + D + V+ G+ + + +LYT +
Sbjct: 73 LATYTDTSDNGSFLIQPGGKNDPVAVFDGAVIPVGVNNTPTLLYTSVSFLPIHWSIPYTR 132
Query: 215 SVQVQNLAYPADPSDPLLIKWVKYPGNPVLV-PPPGIGAKDFRDP--------------- 258
+ Q+LA + ++ K PV+ P + FR P
Sbjct: 133 GSETQSLAV----ARDGGRRFDKLDQGPVIADHPFAVDVTAFRAPFVFRSARLDVLLSLD 188
Query: 259 -------------TTAWLTSEGKWRIAIGSRINRTGITFV------YDTKDFINYELLRG 299
W W +A+ ++ G + +F +E L
Sbjct: 189 EEVARNETAVQQAVDGWTEKNAPWYVAVSGGVHGVGPAQFLYRQNGGNASEFQYWEYLGE 248
Query: 300 VLHGVPNTG-------------MWECVDFYPVSTTGEHGLDTSH---NGPGVKHVVKASM 343
N+ +E + ++ G G +
Sbjct: 249 WWQEATNSSWGDEGTWAGRWGFNFETGNVLFLTEEGHDPQTGEVFVTLGTEGSGLPIVPQ 308
Query: 344 DDDRHDYYAIGTYHEKNVTWVPDNPEIDVGIGIRYDYGL-FYASKTFYD----------- 391
HD E + D+G YA+
Sbjct: 309 VSSIHDMLWAAGEVGVGSEQEGAKVEFSPSMAGFLDWGFSAYAAAGKVLPASSAVSKTSG 368
Query: 392 QNKKRRVLWGWIGESDSEIAD----VKKGWASLQGIPRTVALDT--------KTGSNLLQ 439
R V + W+ E AD ++GW +PR + + T +
Sbjct: 369 VEVDRYVSFVWLTGDQYEQADGFPTAQQGWTGSLLLPRELKVQTVENVVDNELVREEGVS 428
Query: 440 WPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVAEFELDKAALEKTAESNVEF 499
W V E D+ T + + L GS T + ++ S
Sbjct: 429 WVVGESDNQTATLRTLGITIARETKAALLANGSVTAEEDRTLQTAAVVPFAQSPSSKFFV 488
Query: 500 SCSSSEGSAE-RGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSSTGRR 558
+ E A R + G +LA + E+T +Y+ + D+S T
Sbjct: 489 LTAQLEFPASARSSPLQSGFEILASE--LERTAIYYQFSNES-------LVVDRSQTSAA 539
Query: 559 EILNESIGEHISCYCPNEHMYMLALSIESSQSIWNIVYVYLQVDHSIVEGFAQGGRTTIT 618
N + L IE+ Q + + + VD+++VE +A GR ++
Sbjct: 540 APTNPGLDS-----FTESGKLRLFDVIENGQEQVETLDLTVVVDNAVVEVYA-NGRFALS 593
Query: 619 SRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQ-MNSAF 657
+ + ++ F+N G ++ + + +A+
Sbjct: 594 TWARSWYD--NSTQIRFFHNGEGEVQFRNVSVSEGLYNAW 631
|
| >3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} Length = 408 | Back alignment and structure |
|---|
Score = 81.1 bits (199), Expect = 2e-16
Identities = 53/376 (14%), Positives = 102/376 (27%), Gaps = 49/376 (13%)
Query: 58 NNNVNDNAKNGLNDVSSSSKEPERLRPFTSASSAGVSEKSNRRF-GSRTASYPWTNNMLS 116
+ K+ + + PE++ + +S S R W
Sbjct: 20 SPKTTKEMKSTDDCPEKVTFTPEQIDHLGITDTNHLSAASKRALKWPTDLGNEWFIQFGP 79
Query: 117 WQRTAFHFQPQKN-WMNDPNGPVFYKGWYHLFYQYNP-------------NGAIWGDIVW 162
Q ++ DP+ + G Y+++Y + W
Sbjct: 80 LQPLKGDLAYEEGVVRRDPSAIIKENGKYYVWYSKSTGPTQGFGGDIEKDKVFPWDRCDI 139
Query: 163 GHAVSKDLIHWYHLPLAMVADQ--WYDIMGVWTGSATILPDGKLMMLYTG----STNESV 216
+A S+D W A+ + YD V+T + + K + Y
Sbjct: 140 WYATSEDGWTWKEEGPAVTRGEKGAYDDRSVFTVEI-MKWEDKYYLCYQTVKSPYNVRVK 198
Query: 217 QVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSR 276
LA+ +D W K + G+ + +D +
Sbjct: 199 NQVGLAW----ADSPDGPWTKSEEPILSPADNGVWKGEEQDRFAVIKKGDFDSHKVHDPC 254
Query: 277 INRTG--------ITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDT 328
I + + F ++ GV G + + P+S +G
Sbjct: 255 IIPYKGKFYLYYKGEQMGEAITFGGRQIRHGVAIADNPKGPYVKSPYNPISNSGHEICVW 314
Query: 329 SHNGPGVKHVVKASMDDDRHDYYAIGTYHEKNVTWVPD--NPEIDVGIGIRYDYGLFYAS 386
+NG G+ ++ G + W PD N EI I + +
Sbjct: 315 PYNG-GIASLI-----------TTDGPEKN-TIQWAPDGINFEIKSVIPGVNAHAIGLNR 361
Query: 387 KTFYDQNKKRRVLWGW 402
++ + WG
Sbjct: 362 TADVEKEPTEILRWGL 377
|
| >4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A Length = 404 | Back alignment and structure |
|---|
Score = 70.2 bits (171), Expect = 6e-13
Identities = 52/335 (15%), Positives = 101/335 (30%), Gaps = 57/335 (17%)
Query: 104 RTASYPWTNNMLSWQRTAFHFQPQKNWMN--------DPNGPVFYKGWYHLFYQY----- 150
R + +N + +P K + DP+ + Y+++Y
Sbjct: 58 RAMKWENHDNKW---FFEYKMEPLKGDLAYEEGVVRRDPSAMLKIGDTYYVWYSKSYGPT 114
Query: 151 --------NPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVA--DQWYDIMGVWTGSATILP 200
W +A SKD + W +A+ YD V+T +
Sbjct: 115 QGFAGDIEKDKVFPWDRCDIWYATSKDGLTWKEQGIAVKRGEKGAYDDRSVFTPEV-MEW 173
Query: 201 DGKLMMLYTG----STNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFR 256
GK + Y T +A P W PVL P +
Sbjct: 174 KGKYYLCYQAVKSPYTVRVKNTIGMACADSPEGL----W-TKTDKPVLEPSDTGEWEGDE 228
Query: 257 DPTTAWLTSEGKWRIAIG--SRINRTGITFVYDTKDFINYELLRG---VLHGVPN----T 307
D ++ + I G ++Y + + E+ G + HGV
Sbjct: 229 DNRFKVVSKGDFDSHKVHDPCIIPYNGKFYMYYKGERMGEEITWGGREIKHGVAIAENPM 288
Query: 308 GMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIGTYHEKNVTWVPDN 367
G + ++ P+S +G + G G+ ++ + D + + + +
Sbjct: 289 GPYVKSEYNPISNSGHEVCVWPYKG-GIASLI--TTDGPEKNTLQ---WSPDGINFEI-- 340
Query: 368 PEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGW 402
+ V G + GL ++ ++ + WG
Sbjct: 341 --MSVVKGAPHAIGLNRSA--DAEKEPTEILRWGL 371
|
| >3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* Length = 374 | Back alignment and structure |
|---|
Score = 69.8 bits (170), Expect = 7e-13
Identities = 52/370 (14%), Positives = 106/370 (28%), Gaps = 60/370 (16%)
Query: 94 SEKSNRRF---GSRTASYPWTNNMLSWQRTAFHFQPQKNWM--------NDPNGPVFYKG 142
K N++ R + W F P K + DP+ +
Sbjct: 3 DSKVNKKLSKASLRAIERGYDEKGPEW-LFEFDITPLKGDLAYEEGVIRRDPSAVLKVDD 61
Query: 143 WYHLFYQYNPNGAI-------------WGDIVWGHAVSKDLIHWYHLPLAMVADQ--WYD 187
YH++Y + W HA SKD I W + A+ YD
Sbjct: 62 EYHVWYTKGEGETVGFGSDNPEDKVFPWDKTEVWHATSKDKITWKEIGPAIQRGAAGAYD 121
Query: 188 IMGVWTGSATILPDGKLMMLYTGSTNESVQVQN----LAYPADPSDPLLIKWVKYPGNPV 243
V+T +G ++Y + +AY P P W P+
Sbjct: 122 DRAVFTPEVLRH-NGTYYLVYQTVKAPYLNRSLEHIAIAYSDSPFGP----W-TKSDAPI 175
Query: 244 LVPPPGIGAKDFRDPTTAWLTSEGKW---RIAIGSRINRTGI-------TFVYDTKDFIN 293
L P G D + + +G + ++ + + ++ +
Sbjct: 176 LSPEND-GVWDTDEDNRFLVKEKGSFDSHKVHDPCLMFFNNRFYLYYKGETMGESMNMGG 234
Query: 294 YELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKAS--------MDD 345
E+ GV G + ++ P++ +G + G G+ ++ +
Sbjct: 235 REIKHGVAIADSPLGPYTKSEYNPITNSGHEVAVWPYKG-GMATMLTTDGPEKNTCQWAE 293
Query: 346 DRHDYYAIGTYHEKNV---TWVPDNPEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGW 402
D ++ + + P++ D GI + Y + ++ +
Sbjct: 294 DGINFDIMSHIKGAPEAVGFFRPESDSDDPISGIEWGLSHKYDASWNWNYLCFFKTRRQV 353
Query: 403 IGESDSEIAD 412
+ +
Sbjct: 354 LDAGSYQQTG 363
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} Length = 364 | Back alignment and structure |
|---|
Score = 60.5 bits (146), Expect = 6e-10
Identities = 25/168 (14%), Positives = 45/168 (26%), Gaps = 18/168 (10%)
Query: 136 GPVFYKGWYHLFY---QYNPNGAIWGDIVWGHAVSKDLIHWYHLPL-AMVADQWYDIMGV 191
Y G + Y + G G+A S D H+ D
Sbjct: 57 AATLYNGEIVVLYRAEDKSGVGIGHRTSRLGYATSTDGTHFQREKTPVFYPDNDSQKELE 116
Query: 192 WTGSA-----TILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVP 246
W G + DG +M+YT ++ +A + L W K+
Sbjct: 117 WPGGCEDPRIAVTDDGLYVMMYTQWNRHVPRLA-VATSRN-----LKDWTKH---GPAFA 167
Query: 247 PPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINY 294
G + + +E + ++N + + F
Sbjct: 168 KAFDGKFFNLGCKSGSILTEVVKGKQVIKKVNGKYFMYWGEEHVFAAT 215
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} Length = 364 | Back alignment and structure |
|---|
Score = 45.9 bits (108), Expect = 3e-05
Identities = 17/158 (10%), Positives = 41/158 (25%), Gaps = 20/158 (12%)
Query: 172 HWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTG------STNESVQVQNLAYPA 225
++ PL ++ + +A L +G++++LY A
Sbjct: 35 TKFYCPLTKD-SIAWESNDTFNPAA-TLYNGEIVVLYRAEDKSGVGIGHRTSRLGYATST 92
Query: 226 DPSDPLLIKWVKYPGNPVLVPPP-----GIGAKDFRDPTTAWLTSEGKWRIAIGSRINRT 280
D + + PV P DP +T +G + +
Sbjct: 93 D-----GTHFQREK-TPVFYPDNDSQKELEWPGGCEDP-RIAVTDDGLYVMMYTQWNRHV 145
Query: 281 GITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPV 318
V +++ ++ + +
Sbjct: 146 PRLAVATSRNLKDWTKHGPAFAKAFDGKFFNLGCKSGS 183
|
| >3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* Length = 356 | Back alignment and structure |
|---|
Score = 59.4 bits (143), Expect = 2e-09
Identities = 34/245 (13%), Positives = 64/245 (26%), Gaps = 36/245 (14%)
Query: 136 GPVFYKGWYHLFY---QYNPNGAIWGDIVWGHAVSKDLIHW--YHLPLAMVADQWYDIMG 190
Y G + Y + G G+A S D IH+ P A
Sbjct: 54 AATIYDGKIVVMYRAEDNSAQGIGSRTSRLGYATSTDGIHFERDTKPAFYPAKDNQAENE 113
Query: 191 VWTGS----ATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVP 246
G+ + DG ++LYT + ++ +A D L W K+
Sbjct: 114 CPGGTEDPRIAMTEDGTYVLLYTQWNRKVPRLA-VATSKD-----LKHWTKFGPAFEKAY 167
Query: 247 PPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINR--------------TGITFVYDTKDFI 292
+ + A L + K + +++N T +
Sbjct: 168 NGKFKDEATKS---ASLVTTLKGDKQVIAKVNGKYFMYWGEKNVYAATSDNLIDWDPLLD 224
Query: 293 NYELLRGVLHGVPNTGMWECVDFYPVSTTGEHG-LDTSHNGPGVKHVVKASMDDDRHDYY 351
L + + + P + + G + + G + + Y
Sbjct: 225 ENGELLKLFSPRSGYFDSQLTECGPPAILTKDGIVLLYN---GKNEPGEKGDTAYPANSY 281
Query: 352 AIGTY 356
G
Sbjct: 282 CAGQA 286
|
| >3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* Length = 356 | Back alignment and structure |
|---|
Score = 42.8 bits (100), Expect = 2e-04
Identities = 36/211 (17%), Positives = 60/211 (28%), Gaps = 32/211 (15%)
Query: 110 WTNNMLSWQRTAFHFQPQKNWM----NDPNGPVFYKGWYHLFYQYNPNG---AIWGDIVW 162
+ ++ W + F+ N + + NG WG+
Sbjct: 149 TSKDLKHWTKFGPAFEKAYNGKFKDEATKSASLVTTLKGDKQVIAKVNGKYFMYWGEKNV 208
Query: 163 GHAVSKDLIHWY--------HLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNE 214
A S +LI W L L ++D G IL +++LY G NE
Sbjct: 209 YAATSDNLIDWDPLLDENGELLKLFSPRSGYFDSQLTECGPPAILTKDGIVLLYNG-KNE 267
Query: 215 SVQVQNLAYPA----------DPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDP----TT 260
+ + AYPA D ++P + P L P
Sbjct: 268 PGEKGDTAYPANSYCAGQALFDVNNPTKLIGR--LDKPFLQPTDDFEKSGQYPAGTVFVE 325
Query: 261 AWLTSEGKWRIAIGSRINRTGITFVYDTKDF 291
+ KW + G + + +F
Sbjct: 326 GLVYYRNKWYLYYGCADSFVAVAVSDKQLNF 356
|
| >2yfr_A Levansucrase, inulosucrase; fructosyltransferase, glycoside hydrolase family GH68, trans sugar utilization; 1.75A {Lactobacillus johnsonii} PDB: 2yft_A* 2yfs_A* Length = 571 | Back alignment and structure |
|---|
Score = 54.9 bits (131), Expect = 6e-08
Identities = 28/182 (15%), Positives = 54/182 (29%), Gaps = 19/182 (10%)
Query: 57 DNNNVNDNAKNGLNDVSSSSKEPERLRPFTSASSAGVSEKSNRRFGSRTASY----PWTN 112
D + + ++ N LN ++ S KE + T +++ + + N
Sbjct: 50 DTSKLTNDQINELNKINFS-KEAKSGTQLTYNDFKKIAKTLIEQDARYAIPFFNASKIKN 108
Query: 113 NMLSWQRTAFHFQPQKNWMND--------PNGPVFYKGWYHLFYQYNPNGAIWGDIVW-- 162
+ A + + + D + G+ + I
Sbjct: 109 MPAAKTLDAQSGKVEDLEIWDSWPVQDAKTGYVSNWNGYQLVIGMMGVPNVNDNHIYLLY 168
Query: 163 GHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGST--NESVQVQN 220
D HW + W+GSAT+ DG + + YT + + Q
Sbjct: 169 NKYGDNDFNHWKNAGPIFGLGTPVI--QQWSGSATLNKDGSIQLYYTKVDTSDNNTNHQK 226
Query: 221 LA 222
LA
Sbjct: 227 LA 228
|
| >1oyg_A Levansucrase; glycoside hydrolase, beta-propeller, TR; 1.50A {Bacillus subtilis} SCOP: b.67.2.2 PDB: 1pt2_A* 3byl_A 3byn_A* 3byk_A 3byj_A 2vdt_A 3om4_A* 3om7_C* 3om6_A* 3om5_A* 3om2_A* Length = 447 | Back alignment and structure |
|---|
Score = 49.5 bits (117), Expect = 3e-06
Identities = 31/190 (16%), Positives = 48/190 (25%), Gaps = 31/190 (16%)
Query: 144 YHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGK 203
++FYQ +I G V KD + + W+GSAT DGK
Sbjct: 95 IYMFYQKVGETSIDSWKNAGR-VFKDSDKFDANDSILKDQTQ-----EWSGSATFTSDGK 148
Query: 204 LMMLYTGSTNESVQVQNLA-----YPADPSDPLLIKWVK-----------YPGNPVLVPP 247
+ + YT + + Q L A S + Y +
Sbjct: 149 IRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDE 208
Query: 248 PGIGAKD---------FRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLR 298
+ D D +L E G + + Y K +
Sbjct: 209 GNYSSGDNHTLRDPHYVEDKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQES 268
Query: 299 GVLHGVPNTG 308
L
Sbjct: 269 QKLLQSDKKR 278
|
| >1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 Length = 338 | Back alignment and structure |
|---|
Score = 42.7 bits (100), Expect = 3e-04
Identities = 10/82 (12%), Positives = 23/82 (28%), Gaps = 8/82 (9%)
Query: 136 GPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLP----LAMVADQWYDIMGV 191
V Y G + ++ + SKD I+W P V + +
Sbjct: 60 AVVPYNGEFVGVFRIDHKN---TRPFLHFGRSKDGINWEIEPEEIQWVDVNGEPFQPSYA 116
Query: 192 WTGSATILPDGKLMMLYTGSTN 213
+ + + + + +
Sbjct: 117 YDPRVVKI-EDTYYITFCTDDH 137
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 704 | |||
| 3ugf_A | 546 | Sucrose:(sucrose/fructan) 6-fructosyltransferase; | 100.0 | |
| 2ac1_A | 541 | Invertase; five fold beta propeller, hydrolase; HE | 100.0 | |
| 1st8_A | 543 | Fructan 1-exohydrolase IIA; five fold beta propell | 100.0 | |
| 3pij_A | 526 | Beta-fructofuranosidase; five-bladed beta-propelle | 100.0 | |
| 1y4w_A | 518 | EXO-inulinase; glycoside hydrolase FAMI crystallog | 100.0 | |
| 3sc7_X | 516 | Inulinase; glycoside hydrolase family 32, glycosyl | 100.0 | |
| 3kf3_A | 509 | Invertase; GH32, glycoprotein, glycosidase, hydrol | 100.0 | |
| 4ffh_A | 492 | Levan fructotransferase; glycoside hydrolase; HET: | 100.0 | |
| 3lig_A | 634 | Fructosyltransferase; five bladed beta-propeller f | 100.0 | |
| 1w2t_A | 432 | Beta fructosidase; hydrolase, glycosidase, inverta | 100.0 | |
| 2yfr_A | 571 | Levansucrase, inulosucrase; fructosyltransferase, | 99.97 | |
| 1oyg_A | 447 | Levansucrase; glycoside hydrolase, beta-propeller, | 99.97 | |
| 1w18_A | 493 | Levansucrase; transferase, fructosyl transferase, | 99.92 | |
| 3r4z_A | 374 | Glycosyl hydrolase family 32, N terminal; AGAR met | 99.92 | |
| 1vkd_A | 338 | Conserved hypothetical protein TM1225; structural | 99.9 | |
| 3p2n_A | 408 | 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-p | 99.9 | |
| 4ak5_A | 404 | Anhydro-alpha-L-galactosidase; hydrolase, marine g | 99.9 | |
| 3qz4_A | 311 | Endo-1,4-beta-xylanase D; 5-bladed beta-propeller | 99.87 | |
| 3qc2_A | 364 | Glycosyl hydrolase; 5-bladed beta propeller fold, | 99.85 | |
| 3vss_A | 496 | Beta-fructofuranosidase; glycoside hydrolase famil | 99.84 | |
| 3qee_A | 307 | Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; | 99.83 | |
| 1gyh_A | 318 | Arabinan endo-1,5-alpha-L-arabinosidase A; arabina | 99.8 | |
| 1uv4_A | 293 | Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hy | 99.79 | |
| 3taw_A | 356 | Hypothetical glycoside hydrolase; 5-bladed beta-pr | 99.78 | |
| 3kst_A | 306 | Endo-1,4-beta-xylanase; structural genomics, joint | 99.78 | |
| 3cu9_A | 314 | Intracellular arabinanase; glycosyl hydrolase, hig | 99.74 | |
| 3p2n_A | 408 | 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-p | 99.7 | |
| 1yrz_A | 528 | Xylan beta-1,4-xylosidase; structural genomics, ny | 99.61 | |
| 3taw_A | 356 | Hypothetical glycoside hydrolase; 5-bladed beta-pr | 99.57 | |
| 3c7f_A | 487 | Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta- | 99.54 | |
| 1yif_A | 533 | Beta-1,4-xylosidase; glycosidase, xylan, structura | 99.49 | |
| 3qc2_A | 364 | Glycosyl hydrolase; 5-bladed beta propeller fold, | 99.49 | |
| 3r4z_A | 374 | Glycosyl hydrolase family 32, N terminal; AGAR met | 99.48 | |
| 2exh_A | 535 | Beta-D-xylosidase; glykosidase, hydrolsase, family | 99.47 | |
| 1vkd_A | 338 | Conserved hypothetical protein TM1225; structural | 99.45 | |
| 3nqh_A | 441 | Glycosyl hydrolase; structural genomics, joint cen | 99.44 | |
| 4ak5_A | 404 | Anhydro-alpha-L-galactosidase; hydrolase, marine g | 99.4 | |
| 3vsf_A | 526 | Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana | 99.25 | |
| 3c2u_A | 538 | Xylosidase/arabinosidase; tetramer, glycoside hydr | 99.13 | |
| 2x8s_A | 470 | Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; | 98.93 | |
| 3cpn_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 98.7 | |
| 3akh_A | 468 | Putative secreted alpha L-arabinofuranosidase II; | 98.59 | |
| 3zxk_A | 542 | Hiaxhd3; hydrolase, sugar binding protein; HET: XY | 98.57 | |
| 3k1u_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 98.43 | |
| 3qz4_A | 311 | Endo-1,4-beta-xylanase D; 5-bladed beta-propeller | 98.34 | |
| 1uv4_A | 293 | Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hy | 98.16 | |
| 1w2t_A | 432 | Beta fructosidase; hydrolase, glycosidase, inverta | 98.04 | |
| 3kst_A | 306 | Endo-1,4-beta-xylanase; structural genomics, joint | 98.02 | |
| 1gyh_A | 318 | Arabinan endo-1,5-alpha-L-arabinosidase A; arabina | 98.02 | |
| 3cu9_A | 314 | Intracellular arabinanase; glycosyl hydrolase, hig | 97.71 | |
| 3qee_A | 307 | Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; | 97.54 | |
| 3vsf_A | 526 | Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana | 97.54 | |
| 3c2u_A | 538 | Xylosidase/arabinosidase; tetramer, glycoside hydr | 97.52 | |
| 1yif_A | 533 | Beta-1,4-xylosidase; glycosidase, xylan, structura | 97.46 | |
| 1yrz_A | 528 | Xylan beta-1,4-xylosidase; structural genomics, ny | 97.45 | |
| 3nqh_A | 441 | Glycosyl hydrolase; structural genomics, joint cen | 97.39 | |
| 3c7f_A | 487 | Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta- | 97.27 | |
| 3cpn_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 97.27 | |
| 2exh_A | 535 | Beta-D-xylosidase; glykosidase, hydrolsase, family | 97.24 | |
| 1w18_A | 493 | Levansucrase; transferase, fructosyl transferase, | 97.22 | |
| 3akh_A | 468 | Putative secreted alpha L-arabinofuranosidase II; | 97.17 | |
| 2x8s_A | 470 | Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; | 97.15 | |
| 3pij_A | 526 | Beta-fructofuranosidase; five-bladed beta-propelle | 97.06 | |
| 3ugf_A | 546 | Sucrose:(sucrose/fructan) 6-fructosyltransferase; | 96.61 | |
| 1st8_A | 543 | Fructan 1-exohydrolase IIA; five fold beta propell | 96.59 | |
| 1oyg_A | 447 | Levansucrase; glycoside hydrolase, beta-propeller, | 96.21 | |
| 2ac1_A | 541 | Invertase; five fold beta propeller, hydrolase; HE | 96.18 | |
| 4ffh_A | 492 | Levan fructotransferase; glycoside hydrolase; HET: | 96.07 | |
| 2yfr_A | 571 | Levansucrase, inulosucrase; fructosyltransferase, | 95.98 | |
| 1y4w_A | 518 | EXO-inulinase; glycoside hydrolase FAMI crystallog | 95.89 | |
| 3zxk_A | 542 | Hiaxhd3; hydrolase, sugar binding protein; HET: XY | 95.82 | |
| 3k1u_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 95.42 | |
| 3a72_A | 355 | EXO-arabinanase; arabinase, glycosyl hydrolase, hy | 95.03 | |
| 4fj6_A | 523 | Glycoside hydrolase family 33, candidate sialidas; | 94.89 | |
| 3a72_A | 355 | EXO-arabinanase; arabinase, glycosyl hydrolase, hy | 94.66 | |
| 2ydt_A | 367 | EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; | 94.65 | |
| 2ydt_A | 367 | EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; | 94.47 | |
| 1w8o_A | 601 | Bacterial sialidase; 3D-structure, glycosidase, hy | 93.88 | |
| 3lig_A | 634 | Fructosyltransferase; five bladed beta-propeller f | 93.39 | |
| 2bf6_A | 449 | Sialidase, EXO-alpha-sialidase; sialic acid, hydro | 92.53 | |
| 2xzi_A | 386 | KDNAse, extracellular sialidase/neuraminidase, put | 92.34 | |
| 3sc7_X | 516 | Inulinase; glycoside hydrolase family 32, glycosyl | 92.31 | |
| 4fj6_A | 523 | Glycoside hydrolase family 33, candidate sialidas; | 92.18 | |
| 3vss_A | 496 | Beta-fructofuranosidase; glycoside hydrolase famil | 92.0 | |
| 1ms9_A | 648 | Trans-sialidase; trans-glycosylation, protein-acrb | 91.72 | |
| 3kf3_A | 509 | Invertase; GH32, glycoprotein, glycosidase, hydrol | 91.1 | |
| 2sli_A | 679 | Intramolecular trans-sialidase; hydrolase, neurami | 89.52 | |
| 4azz_A | 172 | Levanase; hydrolase; 1.70A {Bacillus subtilis} | 88.58 | |
| 2w20_A | 471 | Sialidase A; secreted, cell WALL, hydrolase, glyco | 88.9 | |
| 3sil_A | 379 | Sialidase; glycosidase, hydrolase; HET: PO4 GOL; 1 | 88.12 | |
| 1w8o_A | 601 | Bacterial sialidase; 3D-structure, glycosidase, hy | 86.71 | |
| 2xzi_A | 386 | KDNAse, extracellular sialidase/neuraminidase, put | 84.89 | |
| 4b1m_A | 185 | Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacil | 83.75 | |
| 2bf6_A | 449 | Sialidase, EXO-alpha-sialidase; sialic acid, hydro | 81.72 |
| >3ugf_A Sucrose:(sucrose/fructan) 6-fructosyltransferase; glycoside hydrolase family 32; HET: NAG FUC BMA MAN; 1.70A {Pachysandra terminalis} PDB: 3ugg_A* 3ugh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-145 Score=1228.76 Aligned_cols=540 Identities=65% Similarity=1.193 Sum_probs=497.0
Q ss_pred CCCCCCCcccccccccceeecCCCCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCC
Q 005279 106 ASYPWTNNMLSWQRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQW 185 (704)
Q Consensus 106 ~~~~~~~~~~~w~Rp~~Hf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~ 185 (704)
.+|||+|+||+||||+|||+|+.||||||||++|++|+|||||||||+++.||+|+||||+|+|||||+++|+||.|+++
T Consensus 6 ~~~~~~~~~~~~~Rp~yH~~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHa~S~DLvhW~~~p~AL~P~~~ 85 (546)
T 3ugf_A 6 VPYPWSNAQLSWQRTAFHFQPERSWMSDPDGPIFYKGWYHFFYQYNPDNPVWGNNTWGHTVSRDLIHWLYLPLALAADQW 85 (546)
T ss_dssp -CCCCCHHHHHHTSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEESSCSSSCSCEEEEEEESSSSSCEECCCCBCSCSG
T ss_pred cCcCcchhhhhhcCCeEEEeCCCCCccCCceeEEECCEEEEEEecCCCCCCCCCcEEEEEEcCCcCccccCCCCCCCCcc
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEeeeEEEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecC
Q 005279 186 YDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTS 265 (704)
Q Consensus 186 yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~ 265 (704)
||.+|||||||++++||+++|||||+.++..|+||+|+|+|++||+|++|+|+++||||.+|++++..+||||+|+|.++
T Consensus 86 ~D~~G~~SGSavv~~dg~~~l~YTg~~~~~~q~q~lA~S~D~~d~~l~~w~K~~~nPVi~~p~g~~~~~fRDPkVvw~~~ 165 (546)
T 3ugf_A 86 YDMQGVFSGSATCLPDGRIMMLYTGVTKEMVEMLSLAYPADLSDPLLVEWVKYPGNPILSAPPGVSPTEFRDASTGWYVS 165 (546)
T ss_dssp GGTTCEEEEEEEECTTSCEEEEEEEECTTCCEEEEEEEESCTTCTTCCCEEECTTCCCBCCCTTSCTTSCCCBCCCEECS
T ss_pred cccCCcCcceEEEeeCCeEEEEEEeccCCCcEEEEEEEECCCCCCccceeEEcCCCceEeCCCCCCcceeeccceEeECC
Confidence 99999999999888899999999999877789999999999999999999999999999988888788999999889878
Q ss_pred CCeEEEEEeeecCCeeEEEEEEeCCCCCcEEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCC
Q 005279 266 EGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDD 345 (704)
Q Consensus 266 ~g~w~Mv~Gs~~~~~G~~llY~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~ 345 (704)
+|+|+|++|++.++.|++++|+|+||++|++.+.+++..++.|||||||||+|++++.+||++|++|+++||||+.|.++
T Consensus 166 ~g~w~MviGa~~~~~G~vllY~S~DL~~W~~~~~~~~~~~~~gmwECPDlf~l~~~~~~gl~~s~~g~~~k~Vl~~s~~~ 245 (546)
T 3ugf_A 166 NGTWRIAIGAKYNTTGIAMVYETKDFKSFKLLEELLHAVPDTGLWECVDLYPVSTTGEKGLETSVNGPKVKHVLKASIDE 245 (546)
T ss_dssp TTCEEEEEEEEETTEEEEEEEEESSSSSCEECSSCSEEETTCCCEEEEEEEEEESSCSSCCCTTCCSTTEEEEEEEEETT
T ss_pred CCEEEEEEEEccCCcceEEEEECCCCCCceEcccccccCCCCCeEECCeEEEECCcCccceeecccCCceeEEEEecccC
Confidence 99999999998878899999999999999999999876566789999999999998888999999999999999999998
Q ss_pred CCceEEEEEEeeCCceeeecCCCccccccceeeccCCCcccceeecCCCCcEEEEEeeCCCCCccccccCCCCCCCCccE
Q 005279 346 DRHDYYAIGTYHEKNVTWVPDNPEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQGIPR 425 (704)
Q Consensus 346 ~~~~~Y~iG~~d~~~~~f~p~~~~~D~g~g~~lD~G~fYA~qtf~d~~~gRrIl~GW~~~~d~~~~~~~~gWag~lslPR 425 (704)
.++++|++|+||+++.+|+|++.++|+|+++++|||+|||+|||+|+.++||||||||+++++++++.++||+|+|||||
T Consensus 246 ~~~~~Y~iG~~d~~~~~f~~~~~~~d~g~~~~lD~GdfYA~qtf~d~~~gRril~gWm~~~d~~~~~~~~gW~g~ltlPR 325 (546)
T 3ugf_A 246 QQRDYYAIGTYDLGTNKWTPDNPEEDVGIGLRYDWGKYYASKTFYDPKKQRRVVWAWTKELDSEVADREKGWANVQTIPR 325 (546)
T ss_dssp TTEEEEEEEEEETTTTEEEESCGGGCTTTSCBSCSSSCEEEEEEEETTTTEEEEEEEECCCSCHHHHHHHTEECEECCCE
T ss_pred CCceEEEEeeecCCCCeeecCCcccccCccccccCCCccCcceeecCCCCCEEEEEeCCCCCcCCCCcccCccCcceeCE
Confidence 88899999999998889999998999999999999999999999997679999999999999988888999999999999
Q ss_pred EEEEccCCCceEEeecHHHHHhhhcccccccceEeCCCceeeccCCCccceeeEEEEEechhhhhhcccccceeeecCCC
Q 005279 426 TVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVAEFELDKAALEKTAESNVEFSCSSSE 505 (704)
Q Consensus 426 el~L~~~~G~~L~q~Pv~Ele~LR~~~~~~~~~~~~~gs~~~l~~~~~~~ldi~a~f~~~~~~l~~~~~~~~~~~~~~~~ 505 (704)
||+|++++|.+|+|+||+||++||.+...+.++.+++|++++++...+.|+||+++|+++.+.++...+++.+++|++++
T Consensus 326 el~l~~~~g~~L~q~Pv~El~~LR~~~~~~~~~~~~~g~~~~l~~~~~~q~di~~~f~~~~~~l~~~~~~~~~~~c~~~~ 405 (546)
T 3ugf_A 326 TVLLDQKTGTNVLLWPVEEVESLRLSSKEFSKVKAGAGSVVPLDVGTATQLDIIAEFEIDKEALEGTIEADMGYNCTTSG 405 (546)
T ss_dssp EEEECTTTSSSEEEEECGGGGGGEEEEEEEEEEEECTTEEEECCCSCCSEEEEEEEEEECC-----------CCCGGGSC
T ss_pred EEEEEeCCCCEEEEEehHHHHHHhcCcceecceEecCCCeEEecCCCccEEEEEEEEEeccccccccccccccccccccc
Confidence 99998666668999999999999999999999999999999999888899999999999877777766778899999999
Q ss_pred CCcccccccceEEEEEEcCCCCceeeEEEEEeeCCCCceeEeEEecCCCCCcccccc-ccccceeeEeecCcchhhhhcc
Q 005279 506 GSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSSTGRREILN-ESIGEHISCYCPNEHMYMLALS 584 (704)
Q Consensus 506 ga~~rg~~g~fGl~v~a~~~~~e~t~v~f~~~~~~dg~~~~~~~~Dr~rSs~~~~~~-~~~G~~~~~~~Pv~~~~~~~l~ 584 (704)
||+.||.+|||||.|+++++++|+|+|+|++.|+.+|.++++||+||+|||.+.++. ++||. .+|+ ++
T Consensus 406 ga~~~g~~g~fgl~v~a~~~~~E~T~v~f~~~~~~~~~~~~~~~~D~srSs~~~~~~~~~~~~----~v~v-------~~ 474 (546)
T 3ugf_A 406 GAAERGVLGPFGLLVSATENLSEQTPVYFYIAKGTDGNFKTFFCLDESRSSKASDVSKQVKGF----TVPV-------LD 474 (546)
T ss_dssp GGGSCBTTBCEEEEEEECTTCSSCEEEEEEEEC----CCEEEEEEECTTSCSCSSSCCCEEEE----ECCC-------CT
T ss_pred CccccCcccceEEEEEeCCCCceEEEEEEEeeccCCCcceEEEeeccccccCCcCCcccccce----Eeec-------CC
Confidence 999999999999999999999999999999999888999999999999999999987 77887 7887 56
Q ss_pred ccccccccceEEEEEEEeCCeEEEEEeCCeeEEEEeeecCcccCCccEEEEEeCCCCcEEEEEEEEeecccccccCCCC
Q 005279 585 IESSQSIWNIVYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNSAFIRPYPD 663 (704)
Q Consensus 585 ~e~~~~~~~~l~LrI~VD~SivEvF~n~Gr~v~TsRvYP~~~~~~~~~v~lf~~~~~~~v~~sl~iw~m~s~~~~~~~~ 663 (704)
+|+ ++|||||||||||+|+||||+|||+||||+++++++++|+|||||+++.++++|++|+|+|++++|||+
T Consensus 475 ~~~-------lsLRilvD~SiVE~F~~~Gr~~iTsrvYP~~~~~~~~~l~~fnn~~~~~~~~sl~~W~m~~~~~~~~~~ 546 (546)
T 3ugf_A 475 GEK-------FTMRLLVDHSIVESFAQGGRSCITSRVYPTEAIYGAAKLFLFNNATGASITASLKIWEMNSAFIQPFHR 546 (546)
T ss_dssp TCC-------EEEEEEEETTEEEEEETTTTEEEEEECCCSSSCGGGCEEEEEECCSSCCEEEEEEEEEECCCCCEECC-
T ss_pred CCc-------EEEEEEEecceeeeeccCCeEEEEEEecCCcccCCCcEEEEEeCCCCceEEEEEEEeccccccCccCCC
Confidence 777 999999999999999999999999999999999999999999999988887899999999999999874
|
| >2ac1_A Invertase; five fold beta propeller, hydrolase; HET: NAG MAN; 2.15A {Arabidopsis thaliana} PDB: 2xqr_A* 2oxb_A* 2qqw_A* 2qqv_A* 2qqu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-119 Score=1019.32 Aligned_cols=520 Identities=47% Similarity=0.844 Sum_probs=455.7
Q ss_pred ccccceeecCCCCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCCCCcEEeeeEE
Q 005279 118 QRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSAT 197 (704)
Q Consensus 118 ~Rp~~Hf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSav 197 (704)
+||+|||+|+.||||||||++|++|+|||||||||+++.||+|+||||+|+|||||+++|+||.|+++||.+|||||||+
T Consensus 8 ~Rp~~H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~G~~SGsav 87 (541)
T 2ac1_A 8 YRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAPFDINGCWSGSAT 87 (541)
T ss_dssp TSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESSSSSBEEEEEEECCCSGGGTTCEEEEEEE
T ss_pred cccceeecCccCCeeCCCccEEECCEEEEEEeeCCCCCCCCCcEEEEEECCCccceEECceeecCCCccccCCEEcceEE
Confidence 49999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCC--CCCCCcCccCCeeEEecCCCeEEEEEee
Q 005279 198 ILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPP--PGIGAKDFRDPTTAWLTSEGKWRIAIGS 275 (704)
Q Consensus 198 v~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p--~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs 275 (704)
+++||+++|||||+.....|.||+|+|.|++||+|.+|+|++.||||.+| +++...+||||+|+|.+++|+|+|++|+
T Consensus 88 ~~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPVi~~~~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga 167 (541)
T 2ac1_A 88 ILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGS 167 (541)
T ss_dssp ECTTSCEEEEEEEECTTSCEEEEEEEESCTTCTTCCCEEECTTCCSBCCCTTTCCCTTSEECCCCCEECTTSCEEEEEEE
T ss_pred EeeCCEEEEEEEEeCCCCcEEEEEEEECCCCCCCceeEEecCCCcEEcCCCCCCCCCCceECCeEEeEeCCCeEEEEEEE
Confidence 87799999999996544579999999999999999999999999999887 7877789999998897669999999999
Q ss_pred ecCCeeEEEEEEeCCCCCcEEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCC---cEEEEEEeeCCCCceEEE
Q 005279 276 RINRTGITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPG---VKHVVKASMDDDRHDYYA 352 (704)
Q Consensus 276 ~~~~~G~~llY~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~---~k~VL~~s~~~~~~~~Y~ 352 (704)
+.+..|++++|+|+||++|++.+.+++.....+||||||||+|++++..+|++|++|.. +||||+.|.++...++|+
T Consensus 168 ~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~mwECPdlf~l~~~g~~~l~~s~~g~~~~~~~~vl~~s~~~~~~~~Y~ 247 (541)
T 2ac1_A 168 KIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYT 247 (541)
T ss_dssp EETTEEEEEEEEESSSSSCEECSSCSEEEETSCCEEEEEEEEEESSCSCCCCTTCCCBTTBCEEEEEEEEETTTTEEEEE
T ss_pred ecCCceEEEEEECCCCCCcEEcccccccCCCCCcccCCcEEEECCCCcceeEecCCCCCcccceeEEEeeecCCcceEEE
Confidence 87778999999999999999998887654456899999999999877779999999976 799999999888889999
Q ss_pred EEEeeCCceeeecCCCccccccceeeccCCCcccceeecCCCCcEEEEEeeCCCCCccccccCCCCCCCCccEEEEEccC
Q 005279 353 IGTYHEKNVTWVPDNPEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQGIPRTVALDTK 432 (704)
Q Consensus 353 iG~~d~~~~~f~p~~~~~D~g~g~~lD~G~fYA~qtf~d~~~gRrIl~GW~~~~d~~~~~~~~gWag~lslPRel~L~~~ 432 (704)
+|+||+++.+|+|++..+|.+++.++|||+|||+|||.|++++||||||||+++++..++.++||+|+|||||||.|++
T Consensus 248 ~G~~d~~~~~f~~~~~~~~~~~~~~lD~GdfYA~qtf~d~~~grri~~gW~~~~~~~~~~~~~gW~g~ltlPRel~l~~- 326 (541)
T 2ac1_A 248 IGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWLDR- 326 (541)
T ss_dssp EEEEETTTTEEEECTTCCSSTTSCBSCSSSCEEEEEEEETTTTEEEEEEEECCSSCHHHHHHHTEECEECCCEEEEECT-
T ss_pred EEEEecCCCeEeeCCccccccceeeecCCCcccccEEecCCCCCEEEEEEeCCCCcCCCCCCCCcccccccCEEEEEEc-
Confidence 9999998789999988888888889999999999999997679999999999999887788899999999999999973
Q ss_pred CCceEEeecHHHHHhhhcccc-cccceEeCCCceeeccCCCccceeeEEEEEech----hhhhhcccccceeeecCCCCC
Q 005279 433 TGSNLLQWPVEEVDSLRLTSK-EFKKIELKPGSVMPLDVGSATQLDIVAEFELDK----AALEKTAESNVEFSCSSSEGS 507 (704)
Q Consensus 433 ~G~~L~q~Pv~Ele~LR~~~~-~~~~~~~~~gs~~~l~~~~~~~ldi~a~f~~~~----~~l~~~~~~~~~~~~~~~~ga 507 (704)
+|.+|+|+||+||++||.+.. .+.++.+.+++.+.+....+.++||+++|++.. ..++.. ..+.++.|+. .|+
T Consensus 327 ~g~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~g~ 404 (541)
T 2ac1_A 327 SGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPS-WTDPQLICSK-MNV 404 (541)
T ss_dssp TSSSEEEEECGGGGGGBCSSCEEEEEEEECTTEEEECCSSCTTEEEEEEEEECSCGGGSEECCTT-CCCHHHHHHH-TCT
T ss_pred CCCEEEEeeHHHHHHhhccccccccceEecCCceeEecCCccceeeeEEEEeccccccccccccc-cccccccccc-ccc
Confidence 676799999999999999877 777788888877777777788999999998863 111111 0134456876 678
Q ss_pred cccccccceEEEEEEcCCCCceeeEEEEEeeCCC--CceeEeEEecCCCCCcccccc-ccccceeeEeecCcchhhhhcc
Q 005279 508 AERGALGPFGLLVLADDSLSEQTPVYFYIAKGKD--GSLKTYFCTDQSSTGRREILN-ESIGEHISCYCPNEHMYMLALS 584 (704)
Q Consensus 508 ~~rg~~g~fGl~v~a~~~~~e~t~v~f~~~~~~d--g~~~~~~~~Dr~rSs~~~~~~-~~~G~~~~~~~Pv~~~~~~~l~ 584 (704)
+.||.+++|||.|+++++++|+|.|+|++.++.+ +++.+++|+||+||+...++. ..+|. .+|++ +
T Consensus 405 ~~~~~~~~fgl~~~~~~~~~e~t~i~~~~~~~~~~~~~~~~~~~~Dr~rs~~~~~~~~~~~~~----~~~~~------~- 473 (541)
T 2ac1_A 405 SVKSGLGPFGLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGA----FVDIN------P- 473 (541)
T ss_dssp TSCCSEEEEEEEEEECTTSSSCEEEEEEEEESSTTCSCEEEEEEEECTTSCSCTTSCCCCEEE----EECCC------T-
T ss_pred ccccCccceEEEEEccCCCcccEEEEEEeccCcccCCceEEEEEeecCccCccccccccccce----EEEec------C-
Confidence 8889999999999999998999999999987644 667778999999998765543 44555 56662 2
Q ss_pred ccccccccceEEEEEEEeCCeEEEEEeCCeeEEEEeeecCcccCCccEEEEEeCCCCcEEEEEEEEeecccccc
Q 005279 585 IESSQSIWNIVYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNSAFI 658 (704)
Q Consensus 585 ~e~~~~~~~~l~LrI~VD~SivEvF~n~Gr~v~TsRvYP~~~~~~~~~v~lf~~~~~~~v~~sl~iw~m~s~~~ 658 (704)
+++ ++||||||+|+||||+||||+|||+||||+++++++++|++|+++++.....++++|+|+++++
T Consensus 474 ~~~-------~~Lri~vD~S~vEvF~n~G~~~~Tsrvyp~~~~~~~~~~~~~~~g~~~~~~~~~~~w~l~~~~~ 540 (541)
T 2ac1_A 474 HQP-------LSLRALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQI 540 (541)
T ss_dssp TSC-------EEEEEEEETTEEEEEETTTTEEEEEECCCSSSCGGGCEEEEEECSSSCEEEEEEEEEEBCCCCB
T ss_pred CCc-------eEEEEEEeCCEEEEEECCCEEEEEEEeeCCCccCCcceEEEEeCCCceEEEEEEEEEecceeec
Confidence 456 9999999999999999999999999999999876678999999875432223899999999976
|
| >1st8_A Fructan 1-exohydrolase IIA; five fold beta propeller; HET: NDG NAG MAN; 2.35A {Cichorium intybus} PDB: 2add_A* 2ade_A* 2aey_A* 2aez_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-118 Score=1015.40 Aligned_cols=521 Identities=44% Similarity=0.854 Sum_probs=454.4
Q ss_pred ccccceeecCCCCccCCCcceEECCEEEEEEeeCCCCCCCCC-cEEEEEEeCCCcceeecccccccCCCCCCCcEEeeeE
Q 005279 118 QRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGD-IVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSA 196 (704)
Q Consensus 118 ~Rp~~Hf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~-~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSa 196 (704)
+||+|||+|+.||||||||++|++|+|||||||||+++.||+ |+||||+|+|||||+++|+||.|+++||.+|||||||
T Consensus 7 ~Rp~~H~~p~~gw~NDPnG~~~~~G~yHlFYQ~~P~~~~~g~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~Gv~SGsa 86 (543)
T 1st8_A 7 YRTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLVNWIHLDPAIYPTQEADSKSCWSGSA 86 (543)
T ss_dssp TSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEESSCSSCCSCCEEEEEEESSSSSEEECCCSBCCCSGGGTTEEEEEEE
T ss_pred ccccccccCCcCCeECCcccEEECCEEEEEEeeCCCCCCCCCccEEEEEECCCccceEECCeeccCCCccccCCEEcceE
Confidence 499999999999999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred EEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeee
Q 005279 197 TILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSR 276 (704)
Q Consensus 197 vv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~ 276 (704)
++++||+++|||||......|.||+|+|.|++||+|.+|+|++.||||.+|+++...+||||+|+|.+++|+|+|++|++
T Consensus 87 v~~~dg~~~l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPVi~~~~g~~~~~fRDP~vvw~~~~g~w~mv~ga~ 166 (543)
T 1st8_A 87 TILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFLREWVKHPKNPLITPPEGVKDDCFRDPSTAWLGPDGVWRIVVGGD 166 (543)
T ss_dssp EEETTTEEEEEEEEECTTSCEEEEEEEESCTTCTTCCCEEECTTCCSBCCCTTCCTTSEECCCCCEECTTSCEEEEEEEE
T ss_pred EEeeCCEEEEEEEEeCCCCcEEEEEEEECCCCCCCcceeEEcCCCcEEeCCCCCCcCccCCCeEEEECCCCcEEEEEEEe
Confidence 88789999999999644457999999999999999999999989999988888878999999988976799999999998
Q ss_pred cCCeeEEEEEEeCCCCCcEEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCCCceEEEEEEe
Q 005279 277 INRTGITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIGTY 356 (704)
Q Consensus 277 ~~~~G~~llY~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~~~~~Y~iG~~ 356 (704)
.+..|++++|+|+||++|++.+.+++..+..+||||||||+|+.++..+|++|++|...||||+.|. ..+++|++|+|
T Consensus 167 ~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~mwECPdlf~l~~~g~~~l~~s~~g~~~~~vl~~s~--~~~~~Y~iG~~ 244 (543)
T 1st8_A 167 RDNNGMAFLYQSTDFVNWKRYDQPLSSADATGTWECPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGF--EGHDWYTIGTY 244 (543)
T ss_dssp ETTEEEEEEEEESSSSSCEECSSCSEEETTCCCCEEEEEEEEETTCSCCCCTTCCSTTEEEEEEEEE--TTEEEEEEEEE
T ss_pred cCCceEEEEEECCCCCCcEECccccccCCCCCceeCCcEEEECCCCccceEecCCCCCceEEEEecc--CCccEEEEEEE
Confidence 7778999999999999999998887755556899999999999877779999999988999999987 46789999999
Q ss_pred eCCceeeecCCCcc--ccccceeeccCCCcccceeecCCCCcEEEEEeeCCCCCccccccCCCCCCCCccEEEEEccCCC
Q 005279 357 HEKNVTWVPDNPEI--DVGIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQGIPRTVALDTKTG 434 (704)
Q Consensus 357 d~~~~~f~p~~~~~--D~g~g~~lD~G~fYA~qtf~d~~~gRrIl~GW~~~~d~~~~~~~~gWag~lslPRel~L~~~~G 434 (704)
|+++++|+|+.... |.++++++|||+|||+|||+|+.++||||||||+++++..++.++||+|+|||||||.|++ +|
T Consensus 245 d~~~~~f~~~~~~~~~d~~~~~~lD~GdfYA~qtf~~~~~grri~~gW~~~~~~~~~~~~~gW~g~ltlPRel~l~~-~g 323 (543)
T 1st8_A 245 SPDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQADDIEKGWAGLQSFPRALWIDR-NG 323 (543)
T ss_dssp ETTTTEEEETTCCCCCSSTTSEESBSSSCEEEEEEEETTTTEEEEEEEECCCSCHHHHHHHTEECEECCCEEEEECT-TS
T ss_pred eCCCCeEeeCCccccccccceeeccCCCcccccEeecCCCCCEEEEEecCCCCcCCCCCCCCccceeeeCEEEEEEe-CC
Confidence 99878999987655 8888889999999999999997679999999999999888888899999999999999973 67
Q ss_pred ceEEeecHHHHHhhhcccccccceEeCCCceeeccCCCccceeeEEEEEechhhhhhcccc---cceeeecCCCCCcccc
Q 005279 435 SNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVAEFELDKAALEKTAES---NVEFSCSSSEGSAERG 511 (704)
Q Consensus 435 ~~L~q~Pv~Ele~LR~~~~~~~~~~~~~gs~~~l~~~~~~~ldi~a~f~~~~~~l~~~~~~---~~~~~~~~~~ga~~rg 511 (704)
.+|+|+||+||++||.+...+.++.+..++.+.+....+.++||+++|++....-....++ +....|+. .+++.+|
T Consensus 324 ~~L~q~Pv~El~~LR~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 402 (543)
T 1st8_A 324 KQLIQWPVEEIEELRQNQVNLQNKNLKPGSVLEIHGIAASQADVTISFKLEGLKEAEVLDTTLVDPQALCNE-RGASSRG 402 (543)
T ss_dssp SSEEEEECGGGGGGEEEEEEEEEEEECTTEEEECCSSCTTEEEEEEEEEECCGGGSEECCCSSCCHHHHHHH-SCTTSCC
T ss_pred CEEEEeEhHHHHHhhcCcccceeEEecCCceEEecccccceeeEEEEEeecccccccccccccccccccccc-ccccccc
Confidence 6799999999999999888888888888887777777788999999998862100000111 22345766 5677788
Q ss_pred cccceEEEEEEcCCCCceeeEEEEEeeCCCCceeEeEEecCCCCCcccccc-ccccceeeEeecCcchhhhhcccccccc
Q 005279 512 ALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSSTGRREILN-ESIGEHISCYCPNEHMYMLALSIESSQS 590 (704)
Q Consensus 512 ~~g~fGl~v~a~~~~~e~t~v~f~~~~~~dg~~~~~~~~Dr~rSs~~~~~~-~~~G~~~~~~~Pv~~~~~~~l~~e~~~~ 590 (704)
..++|||.|+++++++|+|.|+|++.++.++++.+.+|+||+||+...+.. ..+|. .+|++ +.+++
T Consensus 403 ~~~~fgl~~~~~~~~~e~t~i~~~~~~~~~~~~~~~~~~Dr~rs~~~~~~~~~~~~~----~~~~~------~~~~~--- 469 (543)
T 1st8_A 403 ALGPFGLLAMASKDLKEQSAIFFRVFQNQLGRYSVLMCSDLSRSTVRSNIDTTSYGA----FVDID------PRSEE--- 469 (543)
T ss_dssp SSCCEEEEEEECTTSSSCEEEEEEEEECTTSCEEEEEEEECTTSCSCSSCCCCCEEE----EECCC------TTTSC---
T ss_pred cccceEEEEEccCCCcccEEEEEEeecccCCeEEEEEEecccccCccccccccccce----EEEEe------ccCCe---
Confidence 899999999999998999999999998877888888999999998765543 44554 56652 34566
Q ss_pred ccceEEEEEEEeCCeEEEEEeCCeeEEEEeeecCcccCCccEEEEEeCCCCcEEEEEEEEeeccccccc
Q 005279 591 IWNIVYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNSAFIR 659 (704)
Q Consensus 591 ~~~~l~LrI~VD~SivEvF~n~Gr~v~TsRvYP~~~~~~~~~v~lf~~~~~~~v~~sl~iw~m~s~~~~ 659 (704)
++||||||+|+||||+||||+|||+||||+++++++.+|++|+++++.....++++|+|++++++
T Consensus 470 ----~~LrI~vD~SsvEvF~n~G~~~~TsRvyp~~~~~~~~~i~~~~~g~~~~~~~~l~~w~l~~~~~~ 534 (543)
T 1st8_A 470 ----ISLRNLIDHSIIESFGAGGKTCITSRIYPKFVNNEEAHLFVFNNGTQNVKISEMSAWSMKNAKFV 534 (543)
T ss_dssp ----EEEEEEEETTEEEEEEGGGTEEEEEECCCSGGGTSCCEEEEEECSSSCEEEEEEEEEEECCCCEE
T ss_pred ----EEEEEEEeCCEEEEEECCCEEEEEEEeecCCccCCcceEEEEeCCCceEEEEEEEEEechhheec
Confidence 99999999999999999999999999999998767889999998754322238999999999976
|
| >3pij_A Beta-fructofuranosidase; five-bladed beta-propeller and beta-sandwich domains, glycos hydrolase family 32, probiotic bacteria, fructose; HET: FRU; 1.80A {Bifidobacterium longum} PDB: 3pig_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-105 Score=902.93 Aligned_cols=460 Identities=26% Similarity=0.467 Sum_probs=377.8
Q ss_pred ccccceeecCCCCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCCCCcEEeeeEE
Q 005279 118 QRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSAT 197 (704)
Q Consensus 118 ~Rp~~Hf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSav 197 (704)
+||+|||+|+.||||||||++|++|+|||||||||+++.||+|+||||+|+|||||+++|+||.|+.+||.+|||||||+
T Consensus 39 ~Rp~~H~~p~~gwmNDPNG~~y~~G~YHlFYQ~~P~~~~wg~~~WgHa~S~DLvhW~~~~~aL~P~~~~d~~g~~SGSav 118 (526)
T 3pij_A 39 WYPKYHIASNGGWINDPNGLCFYKGRWHVFYQLHPYGTQWGPMHWGHVSSTDMLNWKREPIMFAPSLEQEKDGVFSGSAV 118 (526)
T ss_dssp SCCSSSCBCSSEEEEEEEEEEEETTEEEEEEEEETTCSSSCSBEEEEEEESSSSSEEECCCCBCCCBGGGTTEEEEEEEE
T ss_pred ccccEeEeCCcCCeeCCeEEEEECCEEEEEEEcCCCCCCcCCcEEEEEEeCCCCCceeCeeccCCCCccccCCeEeceEE
Confidence 49999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCcEEEEEecccC--------CceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeE
Q 005279 198 ILPDGKLMMLYTGSTN--------ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKW 269 (704)
Q Consensus 198 v~~dG~~~~~YTG~~~--------~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w 269 (704)
+++||+++|+|||+.. ...|.||+|+|+|++ |++|+|++ |||..|++....+||||+| |. .+|+|
T Consensus 119 ~~~dg~~~l~YTg~~~~~~~~~~~~~~q~q~lA~S~D~g---l~~w~K~~--pvi~~P~~~~~~~fRDP~V-~~-~~g~w 191 (526)
T 3pij_A 119 IDDNGDLRFYYTGHRWANGHDNTGGDWQVQMTALPDNDE---LTSATKQG--MIIDCPTDKVDHHYRDPKV-WK-TGDTW 191 (526)
T ss_dssp ECTTSCEEEEEEEEEETTSSSGGGCEEEEEEEEEESSTT---CSCEEEEE--EEECCCGGGEEEEEEEEEE-EE-ETTEE
T ss_pred EccCCEEEEEEecccCcccccCCCCceeEEEEEEECCCC---cceEEECC--ccccCCCCccccccccCEE-EE-ECCEE
Confidence 8888999999999842 125999999999864 68999984 8888665445689999996 53 68999
Q ss_pred EEEEeeec-CCeeEEEEEEeCCCCCcEEeccee-ccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCC--
Q 005279 270 RIAIGSRI-NRTGITFVYDTKDFINYELLRGVL-HGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDD-- 345 (704)
Q Consensus 270 ~Mv~Gs~~-~~~G~~llY~S~Dl~~W~~~~~l~-~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~-- 345 (704)
+|++|++. +..|++++|+|+||++|++.++++ ......+||||||||+|++.. ...||||.+|..+
T Consensus 192 ~mv~ga~~~~~~G~i~ly~S~Dl~~W~~~g~l~~~~~~~g~mwECPdlf~l~~~~----------g~~k~vL~~s~~g~~ 261 (526)
T 3pij_A 192 YMTFGVSSADKRGQMWLFSSKDMVRWEYERVLFQHPDPDVFMLECPDFSPIKDKD----------GNEKWVIGFSAMGSK 261 (526)
T ss_dssp EEEEEEEETTSCEEEEEEEESSSSSCEEEEEEEECSCTTCCEEEEEEEEEEECTT----------SCEEEEEEEEEESCC
T ss_pred EEEEEEecCCCCcEEEEEECCCCCcceEcCcccccCCCccCeEECCEEEEECCCC----------CceeEEEEEeccccC
Confidence 99999764 678999999999999999999954 333345699999999998522 2469999877532
Q ss_pred --------CCceEEEEEEeeCCceeeecCCCccccccceeeccC-CCcccceeecCCCCcEEEEEeeCCCCCccccccCC
Q 005279 346 --------DRHDYYAIGTYHEKNVTWVPDNPEIDVGIGIRYDYG-LFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKG 416 (704)
Q Consensus 346 --------~~~~~Y~iG~~d~~~~~f~p~~~~~D~g~g~~lD~G-~fYA~qtf~d~~~gRrIl~GW~~~~d~~~~~~~~g 416 (704)
..+++|++|+||.. .+|+|+.. ..++||| +|||+|||. + ++||||||||+++++..++.++|
T Consensus 262 ~~~~~~~~~~~~~Y~vG~~d~~-~~f~~~~~------~~~lD~G~dfYA~qtf~-~-~gRri~~gW~~~~~~~~~~~~~g 332 (526)
T 3pij_A 262 PSGFMNRNVSNAGYMIGTWEPG-GEFKPETE------FRLWDCGHNYYAPQSFN-V-DGRQIVYGWMSPFVQPIPMEDDG 332 (526)
T ss_dssp CBTTBSCSSSEEEEEEEEECTT-SCEEESSC------CEESCCSSSCEEEEEEE-E-TTEEEEEEEECCCSSCCGGGGGT
T ss_pred CCccccccccceeEEEEEEcCC-CcEEECCc------ceeeeeCCCccccceeC-C-CCCEEEEEecCCCcccCCCCCCC
Confidence 23578999999942 47998753 3579999 799999998 4 79999999999999988888999
Q ss_pred CCCCCCccEEEEEccCCCceEEeecHHHHHhhhcccccccceEeCCCceeeccCCCccceeeEEEEEechhhhhhccccc
Q 005279 417 WASLQGIPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVAEFELDKAALEKTAESN 496 (704)
Q Consensus 417 Wag~lslPRel~L~~~~G~~L~q~Pv~Ele~LR~~~~~~~~~~~~~gs~~~l~~~~~~~ldi~a~f~~~~~~l~~~~~~~ 496 (704)
|+|+|||||||.|++ +| +|+|+|++||++||.+...+.++.+..+....+.. .+.+++|+++|++...
T Consensus 333 W~g~ltlPRel~l~~-~g-~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~-~~~~~el~~~~~~~~~--------- 400 (526)
T 3pij_A 333 WCGQLTLPREITLGD-DG-DVVTAPVAEMEGLREDTLDHGSVTLDMDGEQIIAD-DAEAVEIEMTIDLAAS--------- 400 (526)
T ss_dssp EECEECCCEEEEECT-TS-SEEEEECGGGGGGBSCCEEEEEEEECSSEEEEEES-CCSSEEEEEEEETTTC---------
T ss_pred ccceEEeCEEEEEEe-CC-cEEEeecHHHHHhhhCcccccceEeccCCceEecC-CCcEEEEEEEEEECCC---------
Confidence 999999999999975 45 69999999999999988777777776553333332 3567888888876421
Q ss_pred ceeeecCCCCCcccccccceEEEEEEcCCCCceeeEEEEEeeCCCCceeEeEEecCCCCCccccccccccceeeEeecCc
Q 005279 497 VEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSSTGRREILNESIGEHISCYCPNE 576 (704)
Q Consensus 497 ~~~~~~~~~ga~~rg~~g~fGl~v~a~~~~~e~t~v~f~~~~~~dg~~~~~~~~Dr~rSs~~~~~~~~~G~~~~~~~Pv~ 576 (704)
..++|||.|+++++. |+|.|+|+..+ + .+++||++|+... ..++..+ .+|+
T Consensus 401 ---------------~~~~~gl~l~~~~~~-e~t~i~yd~~~---~----~l~~DR~~s~~~~---~~~~~~~--~~~~- 451 (526)
T 3pij_A 401 ---------------TAERAGLKIHATEDG-AYTYVAYDGQI---G----RVVVDRQAMANGD---RGYRAAP--LTDA- 451 (526)
T ss_dssp ---------------CCSEEEEEEEECTTS-CCEEEEEETTT---T----EEEEECTTCSSSC---CCEEEEE--CCHH-
T ss_pred ---------------CcceEEEEEEECCCC-cEEEEEEEeCC---C----EEEEECCCCCCCC---CccceEE--Eeee-
Confidence 123699999988875 89999997643 2 3789999997642 2233211 2333
Q ss_pred chhhhhccccccccccceEEEEEEEeCCeEEEEEeCCeeEEEEeeecCcccCCccEEEEEeCCCCcEEEEEEEEeecccc
Q 005279 577 HMYMLALSIESSQSIWNIVYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNSA 656 (704)
Q Consensus 577 ~~~~~~l~~e~~~~~~~~l~LrI~VD~SivEvF~n~Gr~v~TsRvYP~~~~~~~~~v~lf~~~~~~~v~~sl~iw~m~s~ 656 (704)
.+..++ ++||||||+|+||||+||||+|||+||||+++ ..+|.+|++++.+.+. ++++|+|+++
T Consensus 452 -----~~~~~~-------~~LrI~vD~SsvEvF~n~G~~v~Tsrvyp~~~---~~~i~l~a~gg~~~~~-~l~~~~l~~~ 515 (526)
T 3pij_A 452 -----ELASGK-------LDLRVFVDRGSVEVYVNGGHQVLSSYSYASEG---PRAIKLVAESGSLKVD-SLKLHHMKSI 515 (526)
T ss_dssp -----HHHHSE-------EEEEEEECSSEEEEEETTTTEEEEEECCCCSS---CCEEEEEEESSCEEEE-EEEEEEBCCC
T ss_pred -----cCCCCc-------EEEEEEEeCCEEEEEECCCeEEEEEEEcCCCC---CceEEEEEcCCeEEEE-EEEEEecccc
Confidence 123445 99999999999999999999999999999875 3578888877665554 8999999999
Q ss_pred cccC
Q 005279 657 FIRP 660 (704)
Q Consensus 657 ~~~~ 660 (704)
++..
T Consensus 516 ~~~~ 519 (526)
T 3pij_A 516 GLEL 519 (526)
T ss_dssp SSSC
T ss_pred hhhh
Confidence 8753
|
| >1y4w_A EXO-inulinase; glycoside hydrolase FAMI crystallographic structure, native structure, hydrolase; HET: NAG; 1.55A {Aspergillus awamori} SCOP: b.29.1.19 b.67.2.3 PDB: 1y9g_A* 1y9m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-104 Score=896.50 Aligned_cols=468 Identities=27% Similarity=0.481 Sum_probs=379.9
Q ss_pred ccccceeecCCCCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeeccccc----ccCCCCCCCcEEe
Q 005279 118 QRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAM----VADQWYDIMGVWT 193 (704)
Q Consensus 118 ~Rp~~Hf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL----~Pd~~yD~~Gv~S 193 (704)
+||+|||+|+.||||||||++|++|+|||||||||+++.||+|+||||+|+|||||+++|+|| .|+ +|.+||||
T Consensus 7 ~Rp~~H~~P~~gw~NDPnG~~~~~G~yHlfyQ~~P~~~~wg~~~WgHa~S~Dlv~W~~~~~al~~~g~P~--~d~~g~~S 84 (518)
T 1y4w_A 7 YRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWEEKPVALLARGFGS--DVTEMYFS 84 (518)
T ss_dssp TCCSSSCCCSSEEEEEEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESSSSSCEEEEEEECCBTTTS--CCCBEEEE
T ss_pred ccccEeeeCCcCceECCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCccEEECCceEecCCCCC--CCCCceEe
Confidence 499999999999999999999999999999999999999999999999999999999999999 776 57899999
Q ss_pred eeEEEecCC----------cEEEEEecccCC------------ceeeEEEEEeCCCCCCccceeEee-CCCceecCCCC-
Q 005279 194 GSATILPDG----------KLMMLYTGSTNE------------SVQVQNLAYPADPSDPLLIKWVKY-PGNPVLVPPPG- 249 (704)
Q Consensus 194 GSavv~~dG----------~~~~~YTG~~~~------------~~q~q~lA~S~D~~D~~l~~W~K~-~~nPVl~~p~g- 249 (704)
|||+++++| +++|||||+.+. ..|.||+|+|.|++ .+|+|+ ++||||.+++.
T Consensus 85 Gsav~~~~~~~g~~~~~~~~~~l~YTg~~~~~~~~~~~~~~~~~~q~q~lA~s~D~g----~~w~k~~~~~pvi~~~~~~ 160 (518)
T 1y4w_A 85 GSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQEDQQSQSIAYSLDDG----LTWTTYDAANPVIPNPPSP 160 (518)
T ss_dssp EEEEECTTCTTSCCCSSSCCEEEEEEEEESSCEECTTSCEECTTEEEEEEEEESSTT----SSCEECTTTCCSBCSCCTT
T ss_pred eeEEEcCCCccccccCCCccEEEEEeeeeccccccccccccccceeEEEEEEEcCCC----ceEEEcCCCCCeEecCCcc
Confidence 999987665 899999998642 25999999999864 899999 78999986543
Q ss_pred --CCCcCccCCeeEEecCCCeEEEE--EeeecCCeeEEEEEEeCCCCCcEEecceeccCCCCCceeeeeeEEcCCCCCCC
Q 005279 250 --IGAKDFRDPTTAWLTSEGKWRIA--IGSRINRTGITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHG 325 (704)
Q Consensus 250 --~~~~~fRDP~Vvw~~~~g~w~Mv--~Gs~~~~~G~~llY~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~g 325 (704)
....+||||+|+|.+++|+|+|+ +|++. .+++|+|+||++|++.+++.+.....+||||||||+|..+++
T Consensus 161 y~~~~~~fRDP~V~~~~~~g~w~mv~~~g~~~----~i~ly~S~DL~~W~~~~~~~~~~~~~~mwECPdlf~l~~~g~-- 234 (518)
T 1y4w_A 161 YEAEYQNFRDPFVFWHDESQKWVVVTSIAELH----KLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDSG-- 234 (518)
T ss_dssp CGGGTTSEEEEEEEEETTTTEEEEEEEEGGGT----EEEEEEESSSSSCEEEEEECCCSCCSSEEEEEEEEEEEBTTS--
T ss_pred cccCCCCcCCCcEeEECCCCcEEEEEEecCCC----eEEEEECCCCCCCeECccccccCCCCCeEECCeEEEeecCCC--
Confidence 24589999998887678999999 66542 589999999999999999876444457999999999965432
Q ss_pred cccccCCCCcEEEEEEeeCCC-------CceEEEEEEeeCCceeeecCCCcccc--ccceeeccC-CCcccceeecCCCC
Q 005279 326 LDTSHNGPGVKHVVKASMDDD-------RHDYYAIGTYHEKNVTWVPDNPEIDV--GIGIRYDYG-LFYASKTFYDQNKK 395 (704)
Q Consensus 326 l~~~~~g~~~k~VL~~s~~~~-------~~~~Y~iG~~d~~~~~f~p~~~~~D~--g~g~~lD~G-~fYA~qtf~d~~~g 395 (704)
.+.||||++|.++. .+++|++|+||+. +|+|+...+.. +...++||| +|||+|||.|.+++
T Consensus 235 -------~~~k~vL~~s~~~~~~~~~~~~~~~Y~vG~~d~~--~f~~~~~~~~~~~~~~~~lD~G~dfYA~qtf~d~~~g 305 (518)
T 1y4w_A 235 -------NSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGT--TFTPDADTVYPGNSTANWMDWGPDFYAAAGYNGLSLN 305 (518)
T ss_dssp -------SCEEEEEEEEEESCCSTTCCSCEEEEEEEEECSS--CEEECTTTSCSSSSCCEESCSSSSCEEEEECBSCCGG
T ss_pred -------CceeEEEEeccCCCCccccccCCcEEEEEEeeCC--EEEeCCcccccccccceEEccCCCCccccccccCCCC
Confidence 24699999998653 3678999999985 79988633211 124799999 89999999985589
Q ss_pred cEEEEEeeCCCCCccccccCCCCCCCCccEEEEEccCCC-ceEEeecHHHHHhhhcccccccceEeCCCceeeccCCCcc
Q 005279 396 RRVLWGWIGESDSEIADVKKGWASLQGIPRTVALDTKTG-SNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSAT 474 (704)
Q Consensus 396 RrIl~GW~~~~d~~~~~~~~gWag~lslPRel~L~~~~G-~~L~q~Pv~Ele~LR~~~~~~~~~~~~~gs~~~l~~~~~~ 474 (704)
||||||||++|+++...+++||+|+|||||||.|++.+| .+|+|+||+||++||.+...+....+..++...+....+.
T Consensus 306 Rri~~gWm~~~~~~~~~pt~gW~g~ltlPRel~l~~~~g~~~L~q~Pv~el~~lr~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (518)
T 1y4w_A 306 DHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQPQEAWSSISNKRPIYSRTFKTLSEGSTNTTTTGE 385 (518)
T ss_dssp GCEEEEECSCTTTGGGCCCSSEECCBCCCEEEEEEEETTEEEEEEEECSCGGGTBCSSCSEEEEEEEECSEECCCEECCS
T ss_pred CEEEEEecCCCccccccCCCCcCcccccCeEEEEEecCCcCeEEEeehHHHHhhhccceeccceeeccccceeecCCCCe
Confidence 999999999999876566789999999999999985344 4899999999999999887666666665554444444566
Q ss_pred ceeeEEEEE-echhhhhhcccccceeeecCCCCCcccccccceEEEEEEcCCCCceeeEEEEEeeCCCCceeEeEEecCC
Q 005279 475 QLDIVAEFE-LDKAALEKTAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQS 553 (704)
Q Consensus 475 ~ldi~a~f~-~~~~~l~~~~~~~~~~~~~~~~ga~~rg~~g~fGl~v~a~~~~~e~t~v~f~~~~~~dg~~~~~~~~Dr~ 553 (704)
+++|+++|+ ... .++|||.|+++++++|.|.|+|+..++ .+|+||+
T Consensus 386 ~~el~~~~~~~~~--------------------------~~~~gl~l~~~~~~~e~~~i~~~~~~~-------~l~~dr~ 432 (518)
T 1y4w_A 386 TFKVDLSFSAKSK--------------------------ASTFAIALRASANFTEQTLVGYDFAKQ-------QIFLDRT 432 (518)
T ss_dssp SEEEEEEEETTCS--------------------------SSEEEEEEEECTTSSSCEEEEEETTTT-------EEEEECT
T ss_pred EEEEEEEEecCCC--------------------------CccEEEEEEcCCCCceeEEEEEEecCC-------EEEEecC
Confidence 888887776 210 136999999998888999999986543 3899999
Q ss_pred CCCccccccccccceeeEeecCcchhhhhccccccccccceEEEEEEEeCCeEEEEEeCCeeEEEEeeecCcccCCccEE
Q 005279 554 STGRREILNESIGEHISCYCPNEHMYMLALSIESSQSIWNIVYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARV 633 (704)
Q Consensus 554 rSs~~~~~~~~~G~~~~~~~Pv~~~~~~~l~~e~~~~~~~~l~LrI~VD~SivEvF~n~Gr~v~TsRvYP~~~~~~~~~v 633 (704)
+|+.. ++...++..+ .+|++ ...+++ ++||||||+|+||||+||||+|||+||||++. +.+|
T Consensus 433 ~s~~~-~~~~~~~~~~--~~~~~-----~~~~~~-------~~lri~vD~SsvEvF~n~G~~~~T~rvyp~~~---~~~i 494 (518)
T 1y4w_A 433 HSGDV-SFDETFASVY--HGPLT-----PDSTGV-------VKLSIFVDRSSVEVFGGQGETTLTAQIFPSSD---AVHA 494 (518)
T ss_dssp TSSCC-TTCTTTSCEE--EEECC-----CCTTSE-------EEEEEEEETTEEEEEETTTTEEEEEECCCCTT---CCEE
T ss_pred CCCCC-cccCcccceE--EEEee-----cCCCCe-------EEEEEEEeCCEEEEEECCCEEEEEEEecCCCC---CCEE
Confidence 99763 2223344433 44441 023455 89999999999999999999999999999864 5789
Q ss_pred EEEeCCCCcEEEEEEEEeecccccc
Q 005279 634 FLFNNATGASVTSSLKAWQMNSAFI 658 (704)
Q Consensus 634 ~lf~~~~~~~v~~sl~iw~m~s~~~ 658 (704)
++|++++.+++. ++++|+|+|+|.
T Consensus 495 ~~~~~~g~~~~~-~~~~~~l~s~w~ 518 (518)
T 1y4w_A 495 RLASTGGTTEDV-RADIYKIASTWN 518 (518)
T ss_dssp EEEEESSCEEEE-EEEEEEBCCCC-
T ss_pred EEEECCCeEEEE-EEEEEecccccC
Confidence 999987555554 899999999983
|
| >3sc7_X Inulinase; glycoside hydrolase family 32, glycosylation cytosol, hydrolase; HET: MAN NAG EPE; 1.50A {Aspergillus ficuum} PDB: 3rwk_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-103 Score=889.30 Aligned_cols=455 Identities=25% Similarity=0.466 Sum_probs=368.1
Q ss_pred ccccceeecCCCCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCCCCcE--Eeee
Q 005279 118 QRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGV--WTGS 195 (704)
Q Consensus 118 ~Rp~~Hf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv--~SGS 195 (704)
+||+|||+|+.||||||||++|++|+|||||||||+++.||+|+||||+|+|||||+++|+|| | |.+|| ||||
T Consensus 28 ~Rp~yH~~P~~gwmNDPNG~~y~~G~YHlFYQ~~P~~~~wg~~~WgHa~S~DLvhW~~~~~aL-~----d~~g~~~~SGS 102 (516)
T 3sc7_X 28 YRPSYHFTPDQYWMNEPNGLIKIGSTWHLFFQHNPTANVWGNICWGHATSTDLMHWAHKPTAI-A----DENGVEAFTGT 102 (516)
T ss_dssp TCCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEETTCSTTCCCEEEEEEESSSSSCEEEEEEE-C----CBTTEEEEEEE
T ss_pred ccccEeecCCcCCcCCCeeeEEECCEEEEEEeCCCCCCccCCCEEEEEEeCCCCcceecCccc-c----CCCCceeEece
Confidence 599999999999999999999999999999999999999999999999999999999999999 4 34566 9999
Q ss_pred EEEecCC----------cEEEEEecccC-CceeeEEEEEeCCCCCCccceeEeeCCCceecCCC----CCC-CcCccCCe
Q 005279 196 ATILPDG----------KLMMLYTGSTN-ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPP----GIG-AKDFRDPT 259 (704)
Q Consensus 196 avv~~dG----------~~~~~YTG~~~-~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~----g~~-~~~fRDP~ 259 (704)
|++++++ .++|||||+.+ .+.|.||+|+|.|.+ ++|+|+++||||.+++ ++. ..+||||+
T Consensus 103 av~~~~~~~g~~~~~~~~l~l~YTg~~~~~~~q~q~lA~s~D~g----~~w~k~~~nPVi~~~~~~~~~~~~~~~fRDPk 178 (516)
T 3sc7_X 103 AYYDPNNTSGLGDSANPPYLAWFTGYTTSSQTQDQRLAFSVDNG----ATWTKFQGNPIISTSQEAPHDITGGLESRDPK 178 (516)
T ss_dssp EEECTTCTTSSSCSSSCCEEEEEEEEETTTTEEEEEEEEESSTT----SCCEECTTCCSBCHHHHTTTCTTSSSSCEEEE
T ss_pred EEEeCCcccccccCCCCeEEEEEeeeeCCCCceEEEEEEecCCC----ceEEEcCCCceEcCCCcccccccCCCcccCCe
Confidence 9987654 59999999865 457999999999864 8999999999998543 332 24899999
Q ss_pred eEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCcEEecceeccCC-C----CCceeeeeeEEcCCCCCCCcccccCCCC
Q 005279 260 TAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLHGVP-N----TGMWECVDFYPVSTTGEHGLDTSHNGPG 334 (704)
Q Consensus 260 Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~S~Dl~~W~~~~~l~~~~~-~----~gmWECPdlf~l~~~~~~gl~~~~~g~~ 334 (704)
|+|.+++|+|+|++|++ ..|.+++|+|+||++|++.+++..... + .+||||||||+|+.++. .+
T Consensus 179 V~~~~~~g~w~mv~g~~--~~~~i~ly~S~DL~~W~~~~~l~~~~~~g~~~~~~mwECPdlf~l~~~g~---------~~ 247 (516)
T 3sc7_X 179 VFFHRQSGNWIMVLAHG--GQDKLSFWTSADTINWTWQSDLKSTSINGLSSDITGWEVPDMFELPVEGT---------EE 247 (516)
T ss_dssp EEEETTTTEEEEEEECB--TTCEEEEEEESSSSSCEEEEEEEGGGSTTCCTTCCCBCCCEEEEEECSSS---------SC
T ss_pred EEEECCCCeEEEEEEEC--CCCEEEEEECCCCCCceEcccccccCCCCcccccceEECCcEEEecccCC---------CC
Confidence 88877789999999864 346899999999999999999876421 1 24999999999986552 24
Q ss_pred cEEEEEEeeCCC-----CceEEEEEEeeCCceeeecCCCccccccceeeccC-CCcccceeec--CCCCcEEEEEeeCCC
Q 005279 335 VKHVVKASMDDD-----RHDYYAIGTYHEKNVTWVPDNPEIDVGIGIRYDYG-LFYASKTFYD--QNKKRRVLWGWIGES 406 (704)
Q Consensus 335 ~k~VL~~s~~~~-----~~~~Y~iG~~d~~~~~f~p~~~~~D~g~g~~lD~G-~fYA~qtf~d--~~~gRrIl~GW~~~~ 406 (704)
.||||++|.++. ..++|++|+||+. +|+++..... .+++||| +|||+|||++ ..++|||+||||+++
T Consensus 248 ~k~VL~~s~~~~~~~~~~~~~Y~vG~~d~~--~f~~~~~~~~---~~~lD~G~DfYA~qtf~~~~~~~gRri~w~w~~~~ 322 (516)
T 3sc7_X 248 TTWVVMMTPAEGSPAGGNGVLAITGSFDGK--SFTADPVDAS---TMWLDNGRDFDGALSWVNVPASDGRRIIAAVMNSY 322 (516)
T ss_dssp EEEEEEECCSSCCTTSSSCCEEEEEEECSS--CEEECCCCTT---TSBSCSSSSCEEEEECBSCCTTTCCCEEEEEECCS
T ss_pred ceEEEEECCCCCCCCCCCceEEEEEEccCC--eeEeCCCCcc---ceeEEcCCCccccccccCCcCCCCCEEEEEECCCc
Confidence 699999998642 4678999999986 6776532111 3589999 6999999984 247999999999887
Q ss_pred CCccccccCCCCCCCCccEEEEEccCCC-ceEEeecHHHHHhhhcccccccceEeCCCceeeccCCCccceeeEEEEEec
Q 005279 407 DSEIADVKKGWASLQGIPRTVALDTKTG-SNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVAEFELD 485 (704)
Q Consensus 407 d~~~~~~~~gWag~lslPRel~L~~~~G-~~L~q~Pv~Ele~LR~~~~~~~~~~~~~gs~~~l~~~~~~~ldi~a~f~~~ 485 (704)
+... +++||+|+|||||||+|++++| .+|+|+||+||++||.+...+.+..+.+++.. +....+.++||+++|++.
T Consensus 323 ~~~~--pt~gW~g~ltlPRel~l~~~~~~~~L~q~Pv~El~~Lr~~~~~~~~~~~~~~~~~-l~~~~~~~~el~~~~~~~ 399 (516)
T 3sc7_X 323 GSNP--PTTTWKGMLSFPRTLSLKKVGTQQHFVQQPITELDTISTSLQILANQTITPGQTL-LSSIRGTALDVRVAFYPD 399 (516)
T ss_dssp TTCS--SCSSEECEECCCEEEEEEEETTEEEEEEEECGGGGGGEEEEEEEEEEEECTTCCB-STTCCCSSEEEEEEEEEC
T ss_pred cCCC--CCCCcccccccCEEEEEEecCCceEEEeCCHHHHHhhhccceeecceEecCCceE-ccCCCceEEEEEEEEEcC
Confidence 6543 4579999999999999986444 48999999999999998877777778776654 333456789999888763
Q ss_pred hhhhhhcccccceeeecCCCCCcccccccceEEEEEEcCCCCceeeEEEEEeeCCCCceeEeEEecCCCCCccccccccc
Q 005279 486 KAALEKTAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSSTGRREILNESI 565 (704)
Q Consensus 486 ~~~l~~~~~~~~~~~~~~~~ga~~rg~~g~fGl~v~a~~~~~e~t~v~f~~~~~~dg~~~~~~~~Dr~rSs~~~~~~~~~ 565 (704)
. + .+|||.|++++ +|+|.|+|+..++ .+|+||++|+.. ...+.+
T Consensus 400 ~-------------------~-------~~fgl~l~~~~--~e~t~i~~d~~~~-------~l~~DR~~sg~~-~~~~~~ 443 (516)
T 3sc7_X 400 A-------------------G-------SVLSLAVRKGA--SEQTVIKYTQSDA-------TLSVDRTESGDI-SYDPAA 443 (516)
T ss_dssp T-------------------T-------CEEEEEEEECS--SCCEEEEEETTTT-------EEEEECTTSSCC-CSCTTS
T ss_pred C-------------------C-------CEEEEEEecCC--CcEEEEEEEccCC-------EEEEecCCCCCc-cccCCc
Confidence 2 0 15999999886 6899999987542 379999998642 122345
Q ss_pred cceeeEeecCcchhhhhccccccccccceEEEEEEEeCCeEEEEEeCCeeEEEEeeecCcccCCccEEEEEeCCCCcEEE
Q 005279 566 GEHISCYCPNEHMYMLALSIESSQSIWNIVYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVT 645 (704)
Q Consensus 566 G~~~~~~~Pv~~~~~~~l~~e~~~~~~~~l~LrI~VD~SivEvF~n~Gr~v~TsRvYP~~~~~~~~~v~lf~~~~~~~v~ 645 (704)
+..+ .+|+. ...+++ ++||||||+||||||+||||+|||+||||+++ +.+|.+|+.++.++++
T Consensus 444 ~~~~--~~~l~-----~~~~~~-------~~Lri~vD~SsvEvF~n~G~~v~Tsrvyp~~~---~~~i~l~a~gG~~~~~ 506 (516)
T 3sc7_X 444 GGVH--TAKLE-----EDGTGL-------VSIRVLVDTCSVEVFGGQGEAVISDLIFPSDS---SDGLALEVTGGNAVLQ 506 (516)
T ss_dssp SSEE--EEECC-----CCTTSC-------EEEEEEEETTEEEEEETTTTEEEEEECCCCTT---CCEEEEEEESSCEEEE
T ss_pred ceEE--Eeeec-----cCCCCc-------EEEEEEEeCcEEEEEECCCEEEEEEEecCCCC---CCeEEEEEcCCcEEEE
Confidence 5533 44441 012456 99999999999999999999999999999874 5789999988777665
Q ss_pred EEEEEeecc
Q 005279 646 SSLKAWQMN 654 (704)
Q Consensus 646 ~sl~iw~m~ 654 (704)
+++||+|+
T Consensus 507 -~l~v~~l~ 514 (516)
T 3sc7_X 507 -SVDVRSVS 514 (516)
T ss_dssp -EEEEEEEC
T ss_pred -EEEEEEee
Confidence 89999986
|
| >3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-100 Score=856.76 Aligned_cols=467 Identities=22% Similarity=0.379 Sum_probs=366.4
Q ss_pred ccccccceeecCCCCccCCCcceEE--CCEEEEEEeeCCCCCCCCC-cEEEEEEeCCCcceeecccccccCCCCCCCcEE
Q 005279 116 SWQRTAFHFQPQKNWMNDPNGPVFY--KGWYHLFYQYNPNGAIWGD-IVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVW 192 (704)
Q Consensus 116 ~w~Rp~~Hf~P~~gWmNDPNG~~y~--~G~YHLFYQ~nP~~~~wG~-~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~ 192 (704)
+.+||+|||+|+.||||||||++|+ +|+|||||||||+++.||+ |+||||+|+|||||+++|+||.|+. |.+|||
T Consensus 7 ~~~Rp~~H~~P~~gwmNDPNG~~y~~~~G~YHlFYQ~nP~~~~wg~~~~WGHa~S~DLvhW~~~~~aL~P~~--d~~G~~ 84 (509)
T 3kf3_A 7 EYNRPLIHFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATSNDLVHWDEHEIAIGPEH--DNEGIF 84 (509)
T ss_dssp HHHSCSSSCCCSSEEEEEEEEEEEETTTTEEEEEEEEETTCSSCCSSBEEEEEEESSSSSCEECSCCBCCSS--TTCEEE
T ss_pred ccccccEeecCCcCCeeCCcceEEeCCCCEEEEEEecCCCCCCCCCcCEEEEEEccCCCCcEECcccccccc--cCCCEE
Confidence 4679999999999999999999999 4999999999999999995 9999999999999999999999997 789999
Q ss_pred eeeEEEec-------------CCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCe
Q 005279 193 TGSATILP-------------DGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPT 259 (704)
Q Consensus 193 SGSavv~~-------------dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~ 259 (704)
|||||++. +|+++|+|||+... .|.||+|+|.|++ .+|+|++.||||..+ ..+||||+
T Consensus 85 SGSav~d~~~t~g~~~~~~~p~~~l~~~YTg~~~~-~q~q~lA~S~D~g----~~~~k~~~nPVi~~~----~~~fRDPk 155 (509)
T 3kf3_A 85 SGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIPD-NQTQDIAFSLDGG----YTFTKYENNPVIDVS----SNQFRDPK 155 (509)
T ss_dssp EEEEEECTTCTTSCCCTTSCGGGCEEEEEEEEETT-EEEEEEEEESSSS----SSCEECTTCCSBCCS----CSSCEEEE
T ss_pred eceEEEeCCccccccccccCCCCceEEEECCCCCC-CeeEEEEEECCCC----cceEEcCCCceEcCC----CCcccCCe
Confidence 99998754 36899999998654 6999999999964 799999999999642 47999999
Q ss_pred eEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCcEEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEE
Q 005279 260 TAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVV 339 (704)
Q Consensus 260 Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL 339 (704)
|+|.+++|+|+|++|+.. .|.+++|+|+||++|++.+.+.+. ...+||||||||+|+.++. .+.||||
T Consensus 156 Vfw~~~~g~w~Mv~g~~~--~g~i~ly~S~DL~~W~~~~~~~~~-~~G~mwECPdlf~l~~~~~---------~~~k~vL 223 (509)
T 3kf3_A 156 VFWHEDSNQWIMVVSKSQ--EYKIQIFGSANLKNWVLNSNFSSG-YYGNQYECPGLIEVPIENS---------DKSKWVM 223 (509)
T ss_dssp EEEETTTTEEEEEEEEGG--GTEEEEEEESSSSSCEEEEEECCB-CCCSCEEEEEEEEEEBTTS---------SCEEEEE
T ss_pred EEEECCCCEEEEEEEECC--CCEEEEEECCCCCCceEccccccC-CccceeECCeEEEECccCC---------CCceEEE
Confidence 889878899999998653 478999999999999999998872 2224999999999986542 3579999
Q ss_pred EEeeCC-----CCceEEEEEEeeCCceeeecCCCccccccceeeccC-CCcccceeecCCCCcEEEEEeeCCCCCccccc
Q 005279 340 KASMDD-----DRHDYYAIGTYHEKNVTWVPDNPEIDVGIGIRYDYG-LFYASKTFYDQNKKRRVLWGWIGESDSEIADV 413 (704)
Q Consensus 340 ~~s~~~-----~~~~~Y~iG~~d~~~~~f~p~~~~~D~g~g~~lD~G-~fYA~qtf~d~~~gRrIl~GW~~~~d~~~~~~ 413 (704)
++|.++ ...++|++|+||+. +|+|++.. ..++||| +|||+|||.+ +++|||+||||++|++..+.+
T Consensus 224 ~~s~~~~~p~g~~~~~Y~vG~~d~~--~f~~~~~~-----~~~lD~G~DfYA~qtf~~-~~grri~igWm~~~~~~~~~p 295 (509)
T 3kf3_A 224 FLAINPGSPLGGSINQYFVGDFDGF--QFVPDDSQ-----TRFVDIGKDFYAFQTFSE-VEHGVLGLAWASNWQYADQVP 295 (509)
T ss_dssp EEEECSCCTTSSCEEEEEEEEECSS--CEEESSCB-----CEESCCSSSCEEEEECBS-CSSSEEEEEECSCTTTTTTSS
T ss_pred EEccCCCCCCCCCceEEEEEEEeCC--EEEecCcc-----ceeeccCCcceeeceeeC-CCCCEEEEEecCCcccccCCC
Confidence 998764 24579999999975 79987643 3579999 6999999965 489999999999999877777
Q ss_pred cCCCCCCCCccEEEEEcc------CCCceEEeecHH-HHHhhhcccccccceEeCCCceeeccCCC-ccceeeEEEEEec
Q 005279 414 KKGWASLQGIPRTVALDT------KTGSNLLQWPVE-EVDSLRLTSKEFKKIELKPGSVMPLDVGS-ATQLDIVAEFELD 485 (704)
Q Consensus 414 ~~gWag~lslPRel~L~~------~~G~~L~q~Pv~-Ele~LR~~~~~~~~~~~~~gs~~~l~~~~-~~~ldi~a~f~~~ 485 (704)
++||+|+|||||||.|++ +++.+|+|+||+ ||++||.... +.++.+.+++.+.+.... ..++||+++|++.
T Consensus 296 ~~~W~g~~tlPRel~l~~~~~~~~~~~~~L~q~Pv~~el~~lr~~~~-~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~ 374 (509)
T 3kf3_A 296 TNPWRSSTSLARNYTLRYVHTNAETKQLTLIQNPVLPDSINVVDKLK-KKNVKLTNKKPIKTNFKGSTGLFDFNITFKVL 374 (509)
T ss_dssp CCSEECCBCCCEEEEEEEEESSSSCEEEEEEEEECCCTTSEEEEEEE-EEEEECCTTSCEECCCSCCCSEEEEEEEEEEC
T ss_pred CCCcccccccCEEEEEEecccCCCCCccEEEEEEcHHHHHHhhCcce-ecceEecCCceeEEecCCCCceEEEEEEEecc
Confidence 899999999999999985 223489999999 9999995543 777788777655554332 2378888888764
Q ss_pred hh-hhhhcccccceeeecCCCCCcccccccceEEEEEEcCCCCceeeEEEEEeeCCCCceeEeEEecCCCCCcccccccc
Q 005279 486 KA-ALEKTAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSSTGRREILNES 564 (704)
Q Consensus 486 ~~-~l~~~~~~~~~~~~~~~~ga~~rg~~g~fGl~v~a~~~~~e~t~v~f~~~~~~dg~~~~~~~~Dr~rSs~~~~~~~~ 564 (704)
.. .+. .+....|+|.++.+.+..|.|.|.|+... + .+.+||++|+.... ...
T Consensus 375 ~~~~~~-------------------~~~~~~~~l~l~~~~~~~e~~~i~yd~~~---~----~l~~DR~~sg~~~~-~~~ 427 (509)
T 3kf3_A 375 NLNVSP-------------------GKTHFDILINSQELNSSVDSIKIGFDSSQ---S----SFYIDRHIPNVEFP-RKQ 427 (509)
T ss_dssp SCCCCG-------------------GGSEEEEEEEECCSSSCCCEEEEEEETTT---T----EEEEECCCTTCCCT-TGG
T ss_pred cccccc-------------------cccceeEEEEEEecCCCCcEEEEEEECCC---C----EEEEECCCCCCCcc-cCc
Confidence 31 000 00011377877656666789999997643 2 37899999975210 111
Q ss_pred ccceeeEeecCcchhhhhc--cccccccccceEEEEEEEeCCeEEEEEeCCeeEEEEeeecCcccCCccEEEEEeCCCC-
Q 005279 565 IGEHISCYCPNEHMYMLAL--SIESSQSIWNIVYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATG- 641 (704)
Q Consensus 565 ~G~~~~~~~Pv~~~~~~~l--~~e~~~~~~~~l~LrI~VD~SivEvF~n~Gr~v~TsRvYP~~~~~~~~~v~lf~~~~~- 641 (704)
++..+ ..+++.. ... ..++ ++||||||+|+||||+|||+.|||+||||++.. ....|.++++.++
T Consensus 428 ~~~~~-~~~~~~p---~~~~~~~~~-------~~L~i~vD~ssvEvF~ndG~~v~T~~iFP~~~~-~~~~l~~~s~~~g~ 495 (509)
T 3kf3_A 428 FFTDK-LAAYLEP---LDYDQDLRV-------FSLYGIVDKNIIELYFNDGTVAMTNTFFMGEGK-YPHDIQIVTDTEEP 495 (509)
T ss_dssp GCCCE-EEEECCC---SEEETTEEE-------EEEEEEEETTEEEEEETTTTEEEEEECCCSTTC-CEEEEEEEECCSSC
T ss_pred cccce-eEEeecc---ccccccCCe-------EEEEEEEeccEEEEEECCCEEEEEEEEcCCCCC-CCceEEEEEcCCCe
Confidence 22211 1222200 000 1234 899999999999999999999999999998752 1357888886333
Q ss_pred -cEEEEEEEEeecc
Q 005279 642 -ASVTSSLKAWQMN 654 (704)
Q Consensus 642 -~~v~~sl~iw~m~ 654 (704)
.+|+ +++|.+|+
T Consensus 496 ~~~i~-~~~~~~l~ 508 (509)
T 3kf3_A 496 LFELE-SVIIRELN 508 (509)
T ss_dssp SEEEE-EEEEEEEE
T ss_pred EEEEE-EEEEEecC
Confidence 5564 89999875
|
| >4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-100 Score=854.34 Aligned_cols=448 Identities=22% Similarity=0.358 Sum_probs=363.0
Q ss_pred cccceeecCCCCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCCCCcEEeeeEEE
Q 005279 119 RTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATI 198 (704)
Q Consensus 119 Rp~~Hf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSavv 198 (704)
.|+|||+|+.||||||||++|++|+|||||||||+++.||+ ||||+|+|||||+++|+||.|++ .+||||||||+
T Consensus 1 ~P~~H~~p~~gwmNDPNG~~y~~G~YHlFYQ~~P~~~~~g~--WgHa~S~DLvhW~~~~~aL~P~~---~~g~~SGSav~ 75 (492)
T 4ffh_A 1 MAVYHMTPPSGWLCNPQRPVTTHGAYQLYYLHSDQNNGPGG--WDHASTTDGVAFTHHGTVMPLRP---DFPVWSGSAVV 75 (492)
T ss_dssp -CCSSCCCSSEEEEEEEEEEEETTEEEEEEEEESSTTCCCE--EEEEEESSSSSCEEEEEEECCBT---TBCCCCEEEEE
T ss_pred CCcEeEcCCCCCeeCCeeeEEECCEEEEEEECCCCCCCCCc--EEEEEeCCCCccEECCCCCCCCC---CCCEEeceEEE
Confidence 48999999999999999999999999999999999999998 99999999999999999999985 68999999998
Q ss_pred ecCCc-------EEEEEecccC--CceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcC------------ccC
Q 005279 199 LPDGK-------LMMLYTGSTN--ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKD------------FRD 257 (704)
Q Consensus 199 ~~dG~-------~~~~YTG~~~--~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~------------fRD 257 (704)
+++|+ ++|||||+.+ ...|.||+|+|+|++ ++|+|+ +||||.+|.. .+ |||
T Consensus 76 ~~~~~~g~~~~~~~l~YTg~~~~~~~~q~q~lA~S~D~g----~~w~k~-~nPvi~~p~~---~~~~~~~~~~~~~~fRD 147 (492)
T 4ffh_A 76 DTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDGG----FTFTAL-PDPVIVNTDG---RAATTPAEIENAEWFRD 147 (492)
T ss_dssp ETTCSSSSCTTEEEEEEEEEGGGCGGGEEEEEEEESSSS----SSCEEC-SSCSBCCTTT---TTCCSHHHHHHHTCEEE
T ss_pred eCCCccccCCCcEEEEEeecccCCCCcEEEEEEEeCCCC----ceEEEc-CccccCCCCc---cccccccccccCCCCcC
Confidence 87775 9999999864 356999999999964 899999 8999986533 35 999
Q ss_pred CeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCcEEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEE
Q 005279 258 PTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKH 337 (704)
Q Consensus 258 P~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~ 337 (704)
|+|+|.+++|+|+|++ ++ .+++++|+|+||++|++.+++.+.....+||||||||+|++++ .+.||
T Consensus 148 P~V~~~~~~g~w~mv~-a~---~~~i~ly~S~DL~~W~~~~~~~~~~~~g~mwECPdlf~l~~~~----------~~~k~ 213 (492)
T 4ffh_A 148 PKIHWDTARGEWVCVI-GR---LRYAAFYTSPNLRDWTLRRNFDYPNHALGGIECPDLFEITADD----------GTRHW 213 (492)
T ss_dssp EEEEEETTTTEEEEEE-EE---TTEEEEEEESSSSSCEECCCEECSCGGGCCCEEEEEEEEECTT----------SCEEE
T ss_pred CEEEEECCCCEEEEEE-EC---CCeEEEEECCCCCCceEeccccccCCccceEECCeEEEECCCC----------CCceE
Confidence 9988866789999999 44 3689999999999999999988754345699999999998642 24699
Q ss_pred EEEEeeCC-----CCceEEEEEEeeCCceeeecCCCccccccceeeccC-CCcccceee--cCCCCcEEEEEeeCCCCCc
Q 005279 338 VVKASMDD-----DRHDYYAIGTYHEKNVTWVPDNPEIDVGIGIRYDYG-LFYASKTFY--DQNKKRRVLWGWIGESDSE 409 (704)
Q Consensus 338 VL~~s~~~-----~~~~~Y~iG~~d~~~~~f~p~~~~~D~g~g~~lD~G-~fYA~qtf~--d~~~gRrIl~GW~~~~d~~ 409 (704)
||++|.++ ...++|++|+||+ .+|+|+..+ ..++||| +|||+|||. |.+++|||+||||++|++.
T Consensus 214 vL~~s~~~~~~~~~~~~~Y~vG~~d~--~~f~~~~~~-----~~~lD~G~dfYA~qtf~~~~~~~grri~~gW~~~~~~~ 286 (492)
T 4ffh_A 214 VLAASMDAYGIGLPMTYAYWTGTWDG--EQFHADDLT-----PQWLDWGWDWYAAVTWPSIDAPETKRLAIAWMNNWKYA 286 (492)
T ss_dssp EEEEECCCGGGTCCSSEEEEEEEECS--SCEEESCSS-----CEESCCSSCCEEEEEEECSSCTTTCEEEEEECCCTTTC
T ss_pred EEEEccCCCCCCCccceEEEEEEeeC--CEEEeCCCC-----ccceeeCCCcccCCeEccCCCCCCCEEEEEecCCCccc
Confidence 99999765 3467899999995 489988643 3589999 799999999 3458999999999999864
Q ss_pred ---cccc-cCCCCCCCCccEEEEEccCCC--ceEEeecHHHHHhhhcccccccceEeCCCceeeccCCCccceeeEEEEE
Q 005279 410 ---IADV-KKGWASLQGIPRTVALDTKTG--SNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVAEFE 483 (704)
Q Consensus 410 ---~~~~-~~gWag~lslPRel~L~~~~G--~~L~q~Pv~Ele~LR~~~~~~~~~~~~~gs~~~l~~~~~~~ldi~a~f~ 483 (704)
.++. .+||+|+|||||||+|++++| .+|+|+||+||++||.+...+.++.+..+.. +.. .+.+++|+++|+
T Consensus 287 ~~~~pt~~~~gW~g~~tlPRel~l~~~~~g~~~L~q~Pv~el~~lr~~~~~~~~~~~~~~~~--~~~-~~~~~el~~~~~ 363 (492)
T 4ffh_A 287 ARDVPTDASDGYNGQNSIVRELRLARQPGGWYTLLSTPVAALTNYVTATTTLPDRTVDGSAV--LPW-NGRAYEIELDIA 363 (492)
T ss_dssp SSCCHHHHHHSEECCBCCCEEEEEEECTTSCEEEEEEECGGGGGGEEEEEEECCEEESSEEE--CSC-CCSSEEEEEEEE
T ss_pred cccCCcccccCcccccccCEEEEEEEcCCCeeEEEEeehHHHHHhhccceeecceeccCcee--ecC-CCceEEEEEEEc
Confidence 4444 489999999999999986445 4899999999999999887777666654322 222 345677777665
Q ss_pred echhhhhhcccccceeeecCCCCCcccccccceEEEEEEcCCCCceeeEEEEEeeCCCCceeEeEEecCCCCCccccccc
Q 005279 484 LDKAALEKTAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSSTGRREILNE 563 (704)
Q Consensus 484 ~~~~~l~~~~~~~~~~~~~~~~ga~~rg~~g~fGl~v~a~~~~~e~t~v~f~~~~~~dg~~~~~~~~Dr~rSs~~~~~~~ 563 (704)
... .+.|||.|+.+++ +.+.|+|+...+ .+++||++|+... +..
T Consensus 364 ~~~--------------------------~~~~gl~l~~~~~--~~~~i~yd~~~~-------~l~ldR~~sg~~~-~~~ 407 (492)
T 4ffh_A 364 WDT--------------------------ATNVGISVGRSPD--GTRHTNIGKYGA-------DLYVDRGPSDLAG-YSL 407 (492)
T ss_dssp ESS--------------------------CSEEEEEEEECTT--SSCCEEEEEETT-------EEEEECGGGCCTT-SCC
T ss_pred cCC--------------------------ccEEEEEEEECCC--CeEEEEEECcCC-------EEEEEccCCCCcc-ccc
Confidence 421 1248999998876 467899987642 3789999987532 112
Q ss_pred cccceeeEeecCcchhhhhccccccccccceEEEEEEEeCCeEEEEEeCCeeEEEEeeecCcccCCccEEEEEeCCCCcE
Q 005279 564 SIGEHISCYCPNEHMYMLALSIESSQSIWNIVYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGAS 643 (704)
Q Consensus 564 ~~G~~~~~~~Pv~~~~~~~l~~e~~~~~~~~l~LrI~VD~SivEvF~n~Gr~v~TsRvYP~~~~~~~~~v~lf~~~~~~~ 643 (704)
.++..+ .+|+. +.+++ ++||||||+|+||||+||||.|||+||||++. +.+|.+|++++.+.
T Consensus 408 ~~~~~~--~~~~~------~~~~~-------~~L~I~vD~SsvEvFvndG~~v~T~rifp~~~---~~~i~~~a~gg~~~ 469 (492)
T 4ffh_A 408 APYSRA--AAPID------PGARS-------VHLRILVDTQSVEVFVNAGHTVLSQQVHFAEG---DTGISLYTDGGPAH 469 (492)
T ss_dssp TTCCEE--EEECC------TTCCE-------EEEEEEEETTEEEEEETTTTEEEEEECCCCTT---CCEEEEEEESSCEE
T ss_pred cCCceE--EEEec------CCCCc-------EEEEEEEeCCEEEEEECCCEEEEEEEEeCCCC---CCeEEEEEcCCeEE
Confidence 233322 44551 23455 99999999999999999999999999999874 57899999877776
Q ss_pred EEEEEEEeecccccc
Q 005279 644 VTSSLKAWQMNSAFI 658 (704)
Q Consensus 644 v~~sl~iw~m~s~~~ 658 (704)
+. ++++|+|+++-.
T Consensus 470 ~~-~l~v~~l~~~~~ 483 (492)
T 4ffh_A 470 FT-GIVVREIGQAIL 483 (492)
T ss_dssp EE-EEEEEEECCC--
T ss_pred EE-EEEEEeCchhhh
Confidence 65 999999988643
|
| >3lig_A Fructosyltransferase; five bladed beta-propeller fold, hydrolase; 1.80A {Aspergillus japonicus} PDB: 3ldk_A* 3lem_A* 3ldr_A 3lih_A* 3lf7_A 3lfi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-97 Score=851.82 Aligned_cols=477 Identities=19% Similarity=0.284 Sum_probs=363.9
Q ss_pred CCcccccccccceeecCCCCccCCCcceE--ECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeec----ccccccCC
Q 005279 111 TNNMLSWQRTAFHFQPQKNWMNDPNGPVF--YKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHL----PLAMVADQ 184 (704)
Q Consensus 111 ~~~~~~w~Rp~~Hf~P~~gWmNDPNG~~y--~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~l----p~AL~Pd~ 184 (704)
++.+++.+||+|||+|+.|||||||||+| ++|+|||||||||+ | ||||+|+|||||+++ |+||.|++
T Consensus 19 ~~~~~~~~Rp~~H~~p~~gwmNDPnG~~yD~~~G~YHlFYQ~~P~----g---WgHa~S~DLvhW~~~~~~~~~aL~P~~ 91 (634)
T 3lig_A 19 NNTLFHLWRPRAHILPAEGQIGDPCAHYTDPSTGLFHVGFLHDGD----G---IAGATTANLATYTDTSDNGSFLIQPGG 91 (634)
T ss_dssp TTTTTTTSCCSSSCCCSSEEEEEECCCEECTTTCCEEEEEEETTS----C---EEEEEESSSSCCEESCSTTCEEECSCS
T ss_pred hcccccccCccEeEcCCCCcccCCccceEeCCCCEEEEEEecCCC----c---eeEEEecCcCceeECcCCCCceecCCC
Confidence 34456677999999999999999999999 99999999999994 4 999999999999999 89999999
Q ss_pred CCCCCcEEeeeEEEe-cCCcEEEEEecccC----------CceeeEEEEEeCCCCCCccceeEeeCCCceec-CCCCCCC
Q 005279 185 WYDIMGVWTGSATIL-PDGKLMMLYTGSTN----------ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLV-PPPGIGA 252 (704)
Q Consensus 185 ~yD~~Gv~SGSavv~-~dG~~~~~YTG~~~----------~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~-~p~g~~~ 252 (704)
+||.+||||||||++ .+|+++|||||+.+ ...|.||+|+|.|+ +++|+|++.||||. +|+++..
T Consensus 92 ~~D~~G~~SGSav~~~~~g~~~~~YTg~~~~~~~~~~~~~~~~q~Q~lA~S~D~----g~~w~K~~~nPVi~~~p~g~~~ 167 (634)
T 3lig_A 92 KNDPVAVFDGAVIPVGVNNTPTLLYTSVSFLPIHWSIPYTRGSETQSLAVARDG----GRRFDKLDQGPVIADHPFAVDV 167 (634)
T ss_dssp SSCSSEEEEEEEESSCGGGSCEEEEEEECSCCCCTTSCCCTTSEEEEEEEEEGG----GTEEEECSSSCSBCSSSTTCCE
T ss_pred CCCCCCcEeeEEEEECCCCEEEEEEEecccccccccCcCCCCcEEEEEEEECCC----CCEEEECCCCceEcCCCcccCC
Confidence 999999999999764 37999999999853 23699999999985 38999999999998 4667777
Q ss_pred cCccCCeeEE----------------------------ecCCCeEEEEEeeec-CCeeEEEEEE--eCC---CCCcEEec
Q 005279 253 KDFRDPTTAW----------------------------LTSEGKWRIAIGSRI-NRTGITFVYD--TKD---FINYELLR 298 (704)
Q Consensus 253 ~~fRDP~Vvw----------------------------~~~~g~w~Mv~Gs~~-~~~G~~llY~--S~D---l~~W~~~~ 298 (704)
.+||||+|+| .+.+|+|||++|++. +.+|+++||+ |+| |++|++++
T Consensus 168 ~~fRDPkV~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ymvlg~~~~~~~g~v~lY~~~s~dd~~l~~W~~~g 247 (634)
T 3lig_A 168 TAFRAPFVFRSARLDVLLSLDEEVARNETAVQQAVDGWTEKNAPWYVAVSGGVHGVGPAQFLYRQNGGNASEFQYWEYLG 247 (634)
T ss_dssp EEEEEEEEECCHHHHHHHHSCTTTTTSHHHHHHHHHTCCGGGCCCEEEEEEEETTTEEEEEEEEEGGGCTTCCSCEEEEE
T ss_pred CccCCCeEccccCccccccccccccccccccccccccccCCCCeEEEEEEEecCCCCCEEEEEEeCCCCccccCCceEec
Confidence 8999999766 226799999999986 5689999999 788 99999999
Q ss_pred ceeccC------------CCCC-ceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCC-----------CceEEEEE
Q 005279 299 GVLHGV------------PNTG-MWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDD-----------RHDYYAIG 354 (704)
Q Consensus 299 ~l~~~~------------~~~g-mWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~-----------~~~~Y~iG 354 (704)
++.... ...| ||||||||+|++++.. ....||||.++.++. ....|++|
T Consensus 248 ~l~~~~~~~~~g~~~~~~~~~G~~wECPdlf~l~~~g~~-------~~~~~~vl~~~~~g~~~~~~~~~~~~~~~~y~~G 320 (634)
T 3lig_A 248 EWWQEATNSSWGDEGTWAGRWGFNFETGNVLFLTEEGHD-------PQTGEVFVTLGTEGSGLPIVPQVSSIHDMLWAAG 320 (634)
T ss_dssp EEEECCTTCCSSSSSCSSCCCCSEEEEEEEEEECSSSBC-------TTTSEEEEEEEEEECCSSCCTTCCCEEEEEEEEE
T ss_pred ccccccccccccccccccCceeeEEECCCEEEECCcccC-------CCCCcEEEEECCCCCCCccccccccccccEEEEE
Confidence 987531 1223 9999999999976420 012589998886432 13468999
Q ss_pred Eee--CC----ceeeecCCCccccccceeeccC-CCcccceeecCC----------C-CcEEEEEeeCCCCCc----ccc
Q 005279 355 TYH--EK----NVTWVPDNPEIDVGIGIRYDYG-LFYASKTFYDQN----------K-KRRVLWGWIGESDSE----IAD 412 (704)
Q Consensus 355 ~~d--~~----~~~f~p~~~~~D~g~g~~lD~G-~fYA~qtf~d~~----------~-gRrIl~GW~~~~d~~----~~~ 412 (704)
+|+ .+ +.+|+|+. ++++||| +|||+|||.++. + |||||||||++++++ .++
T Consensus 321 ~~~~d~~~~~~~~~f~~~~-------~~~lD~G~dfYA~qtf~~~~~~~~~~~~~~~~gRri~igWm~~~~~~~~~~~pt 393 (634)
T 3lig_A 321 EVGVGSEQEGAKVEFSPSM-------AGFLDWGFSAYAAAGKVLPASSAVSKTSGVEVDRYVSFVWLTGDQYEQADGFPT 393 (634)
T ss_dssp EEEECTTSSSCSEEEEEEE-------EEEEECCTTEEEEEEEEECTTSHHHHHHTCCSCEEEEEEEECSSTTTTCSSCCH
T ss_pred EEecCcccccCceeEecCC-------ccccccCcCceecceecccccccccccccCCCCCEEEEEeCCCCcccccccCCC
Confidence 994 43 45676543 5689999 699999999973 2 999999999999865 356
Q ss_pred ccCCCCCCCCccEEEEEcc----------------------CCC----ceEEeecHHHH-Hhhhccccccc--ceEeCCC
Q 005279 413 VKKGWASLQGIPRTVALDT----------------------KTG----SNLLQWPVEEV-DSLRLTSKEFK--KIELKPG 463 (704)
Q Consensus 413 ~~~gWag~lslPRel~L~~----------------------~~G----~~L~q~Pv~El-e~LR~~~~~~~--~~~~~~g 463 (704)
.+.||+|+|||||||+|++ .+| .+|+|+||+|| ++||.+...+. +..+...
T Consensus 394 ~~~gW~g~ltlPReL~l~~~~~v~~~~l~~~~~~s~~~~~~~~G~~t~~~L~q~Pv~El~~~Lr~~~~~~~~~~~~~~~~ 473 (634)
T 3lig_A 394 AQQGWTGSLLLPRELKVQTVENVVDNELVREEGVSWVVGESDNQTATLRTLGITIARETKAALLANGSVTAEEDRTLQTA 473 (634)
T ss_dssp HHHSEECEECCCEEEEEEEEEEEECSHHHHCSSCSCEEEEECSSEEEEEEEEEEECHHHHHHHHHTCEEEEECCEEECSE
T ss_pred CCCCCccccccCEEEEEEEecCccCccccccccccceeccccCCccccCEEEEeecHHHHHHhhccceeecccceecccc
Confidence 6789999999999999952 122 27999999999 99998774322 2333322
Q ss_pred ceeecc-CCCccceeeEEEEEechhhhhhcccccceeeecCCCCCcccccccceEEEEEEcCCCCceeeEEEEEeeCCCC
Q 005279 464 SVMPLD-VGSATQLDIVAEFELDKAALEKTAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGKDG 542 (704)
Q Consensus 464 s~~~l~-~~~~~~ldi~a~f~~~~~~l~~~~~~~~~~~~~~~~ga~~rg~~g~fGl~v~a~~~~~e~t~v~f~~~~~~dg 542 (704)
..+++. ...+.+++|+++|+..... |+....|||.|+++++ |.|.|+|+..+ +
T Consensus 474 ~~~~~~~~~~~~~~El~~~i~~~~~~---------------------~~~a~~~Gl~L~~s~~--e~T~I~Yd~~~---~ 527 (634)
T 3lig_A 474 AVVPFAQSPSSKFFVLTAQLEFPASA---------------------RSSPLQSGFEILASEL--ERTAIYYQFSN---E 527 (634)
T ss_dssp EEEECSSCCSSSEEEEEEEEECCGGG---------------------TTSCCEEEEEEEESSS--CCEEEEEETTT---T
T ss_pred ceecccccCCCcEEEEEEEEecCCCC---------------------cCcccEEEEEEEeCCC--cEEEEEEECCC---C
Confidence 222221 1345678888877653210 1112258999998864 88999997653 2
Q ss_pred ceeEeEEecCCCCCccc----ccc--ccccceeeEeecCcchhhhhccccccccccceEEEEEEEeCCeEEEEEeCCeeE
Q 005279 543 SLKTYFCTDQSSTGRRE----ILN--ESIGEHISCYCPNEHMYMLALSIESSQSIWNIVYVYLQVDHSIVEGFAQGGRTT 616 (704)
Q Consensus 543 ~~~~~~~~Dr~rSs~~~----~~~--~~~G~~~~~~~Pv~~~~~~~l~~e~~~~~~~~l~LrI~VD~SivEvF~n~Gr~v 616 (704)
.+++||++|+... ++. ..+|..|. +++... .....++ ++||||||+|+||||+|| |+|
T Consensus 528 ----~l~vDRs~Sg~~~~~~~~~~~~~e~g~~R~--~~~~~~--~~~~~e~-------l~LrIfVD~SSVEVFvNd-e~v 591 (634)
T 3lig_A 528 ----SLVVDRSQTSAAAPTNPGLDSFTESGKLRL--FDVIEN--GQEQVET-------LDLTVVVDNAVVEVYANG-RFA 591 (634)
T ss_dssp ----EEEEECTTSCTTTTTCTTSCCCCEEEECCC--CEEESS--SSEEECC-------EEEEEEEETTEEEEEETT-TEE
T ss_pred ----EEEEECCCCCCcccccccccccccccceEE--EeecCc--ccccCCc-------eEEEEEEECCEEEEEECC-cEE
Confidence 3789999998642 221 33454332 222000 0011345 999999999999999998 999
Q ss_pred EEEeeecCcccCCccEEEEEeCC-CCcEEEEEEEEee-ccccc
Q 005279 617 ITSRVYPTKAIYGAARVFLFNNA-TGASVTSSLKAWQ-MNSAF 657 (704)
Q Consensus 617 ~TsRvYP~~~~~~~~~v~lf~~~-~~~~v~~sl~iw~-m~s~~ 657 (704)
||+||||..+ ++.+|.+|+++ +.+.+. ++++|+ |..||
T Consensus 592 mTsRIyP~~~--~s~gI~l~a~G~G~a~~~-~l~vw~gl~~aw 631 (634)
T 3lig_A 592 LSTWARSWYD--NSTQIRFFHNGEGEVQFR-NVSVSEGLYNAW 631 (634)
T ss_dssp EEEECCCCCT--TTTEEEEEEESSSCEEEE-EEEEEECCCCSC
T ss_pred EEEEecCCCC--CCCcEEEEECCCccEEEE-EEEEecCccccC
Confidence 9999999833 36799999987 666554 899998 67777
|
| >1w2t_A Beta fructosidase; hydrolase, glycosidase, invertase, raffinose; HET: SUC GLA CIT; 1.87A {Thermotoga maritima} SCOP: b.29.1.19 b.67.2.3 PDB: 1uyp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-92 Score=785.74 Aligned_cols=421 Identities=29% Similarity=0.525 Sum_probs=347.7
Q ss_pred ccccceeecCCCCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCCCCcEEeeeEE
Q 005279 118 QRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSAT 197 (704)
Q Consensus 118 ~Rp~~Hf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSav 197 (704)
+||+|||+|+.||||||||++|++|+|||||||+|+++.||+++||||+|+||+||+++|+||.|+++ .+|||||||+
T Consensus 2 ~Rp~~H~~p~~gw~nDPng~~~~~G~yhlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~~~aL~p~~~--~~g~~sgsav 79 (432)
T 1w2t_A 2 FKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPDDE--THGVFSGSAV 79 (432)
T ss_dssp CSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEETTSSSCCSCEEEEEEESSSSSCEEEEEEECCSST--TEEEEEEEEE
T ss_pred CCcCCcccCCCCCeECCCcCeEECCEEEEEEecCCCCCCCCCcEEEEEEcCCCcCeEECCccCCCCCC--CCCEEeeEEE
Confidence 49999999999999999999999999999999999999999999999999999999999999999876 6799999997
Q ss_pred EecCCcEEEEEecccC-----CceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEE
Q 005279 198 ILPDGKLMMLYTGSTN-----ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIA 272 (704)
Q Consensus 198 v~~dG~~~~~YTG~~~-----~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv 272 (704)
+ .+|+++|||||+.. ...|.||+|+|+|+ .+|+|++.||||..+++....+||||+| |. .+|+|||+
T Consensus 80 ~-~~g~~~l~YTg~~~~~~~~~~~~~q~lA~S~D~-----~~w~k~~~~Pvi~~~p~~~~~~fRDP~V-f~-~dg~~~m~ 151 (432)
T 1w2t_A 80 E-KDGKMFLVYTYYRDPTHNKGEKETQCVVMSENG-----LDFVKYDGNPVISKPPEEGTHAFRDPKV-NR-SNGEWRMV 151 (432)
T ss_dssp E-ETTEEEEEEEEEECCCSSCCCEEEEEEEEESSS-----SCCEECTTCCSBCSCSSTTEEEEEEEEE-EE-CSSSEEEE
T ss_pred E-ECCEEEEEEecCccCCCCCCceEEEEEEEeCCC-----CeEEecCCCceEeCCCccccccccCCEE-EE-ECCEEEEE
Confidence 6 79999999999865 24689999999984 7999998899998654323689999995 53 48999999
Q ss_pred Eeeec-CCeeEEEEEEeCCCCCcEEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCCCceEE
Q 005279 273 IGSRI-NRTGITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYY 351 (704)
Q Consensus 273 ~Gs~~-~~~G~~llY~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~~~~~Y 351 (704)
+|++. +..|.+++|+|+||++|++.+++... ...+|||||+||++++ ||||++|.++...+.|
T Consensus 152 ~g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~-~~g~~~EcP~lf~~~g---------------~~vL~~s~~g~~~~~Y 215 (432)
T 1w2t_A 152 LGSGKDEKIGRVLLYTSDDLFHWKYEGAIFED-ETTKEIDCPDLVRIGE---------------KDILIYSITSTNSVLF 215 (432)
T ss_dssp EEEEETTTEEEEEEEEESSSSSCEEEEEEEEE-TTCSCCEEEEEEEETT---------------EEEEEEEETTTTEEEE
T ss_pred EEEecCCCCcEEEEEECCCCCCceEccccccC-CCCCEEECCeEEEECC---------------EEEEEEeCCCCcceEE
Confidence 99885 56789999999999999999988765 3346999999999962 8999999988778899
Q ss_pred EEEEeeCCceeeecCCCccccccceeeccC-CCcccceeecCCCCcEEEEEeeCCCCC--ccccccCCCCCCCCccEEEE
Q 005279 352 AIGTYHEKNVTWVPDNPEIDVGIGIRYDYG-LFYASKTFYDQNKKRRVLWGWIGESDS--EIADVKKGWASLQGIPRTVA 428 (704)
Q Consensus 352 ~iG~~d~~~~~f~p~~~~~D~g~g~~lD~G-~fYA~qtf~d~~~gRrIl~GW~~~~d~--~~~~~~~gWag~lslPRel~ 428 (704)
++|+|| + ..|.++. ..++||| +|||+|||.|+ + ||||||||+++++ ..++.++||+|+|||||||.
T Consensus 216 ~~G~~d-~-~~~~~~~-------~~~lD~G~dfYA~qtf~~~-~-rri~~gW~~~~~~~~~~pt~~~gW~g~~tlPR~l~ 284 (432)
T 1w2t_A 216 SMGELK-E-GKLNVEK-------RGLLDHGTDFYAAQTFFGT-D-RVVVIGWLQSWLRTGLYPTKREGWNGVMSLPRELY 284 (432)
T ss_dssp EEEEEE-T-TEEEEEE-------EEESCCSSSCEEEEECBSC-S-SEEEEEESSCTTTGGGCCGGGGTEECCBCCCEEEE
T ss_pred EEEEec-C-CEEcCCc-------cceeccCCCccccceecCC-C-CEEEEEEecCcccccccCcccCCCcCceeccEEEE
Confidence 999999 5 4554432 4689999 89999999997 5 9999999999988 56677799999999999999
Q ss_pred EccCCCceEEeecHHHHHhhhcccccccceEeCCCceeeccCCCccceeeEEEEEechhhhhhcccccceeeecCCCCCc
Q 005279 429 LDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVAEFELDKAALEKTAESNVEFSCSSSEGSA 508 (704)
Q Consensus 429 L~~~~G~~L~q~Pv~Ele~LR~~~~~~~~~~~~~gs~~~l~~~~~~~ldi~a~f~~~~~~l~~~~~~~~~~~~~~~~ga~ 508 (704)
|+ +| +|+|+||+||++||.+...+.+ .+ + ..+....+.+++|+++|+.
T Consensus 285 l~--~g-~L~q~Pv~el~~lr~~~~~~~~-~~--~--~~~~~~~~~~~e~~~~~~~------------------------ 332 (432)
T 1w2t_A 285 VE--NN-ELKVKPVDELLALRKRKVFETA-KS--G--TFLLDVKENSYEIVCEFSG------------------------ 332 (432)
T ss_dssp EE--TT-EEEEEECGGGGGGEEEEEEEES-SC--E--EEECCCSSSCEEEEEEEEE------------------------
T ss_pred Ee--CC-EEEEEEcHHHHHhhccceeccc-cc--e--eEecCCCCeEEEEEEEEec------------------------
Confidence 95 56 8999999999999997654432 11 1 2333334567777666542
Q ss_pred ccccccceEEEEEEcCCCCceeeEEEEEeeCCCCceeEeEEecCCCCCccccccccccceeeEeecCcchhhhhcccccc
Q 005279 509 ERGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSSTGRREILNESIGEHISCYCPNEHMYMLALSIESS 588 (704)
Q Consensus 509 ~rg~~g~fGl~v~a~~~~~e~t~v~f~~~~~~dg~~~~~~~~Dr~rSs~~~~~~~~~G~~~~~~~Pv~~~~~~~l~~e~~ 588 (704)
+|||.+..+ .|.|.|+|+ + + .+|+||++|+.. +|..+ .+|+ ..+++
T Consensus 333 ------~~~l~~~~~---~~~~~i~~~--~---~----~~~~dr~~~~~~------~g~~~--~~~~-------~~~~~- 378 (432)
T 1w2t_A 333 ------EIELRMGNE---SEEVVITKS--R---D----ELIVDTTRSGVS------GGEVR--KSTV-------EDEAT- 378 (432)
T ss_dssp ------EEEEEEECS---SCEEEEEEE--T---T----EEEEECTTSSTT------CCCEE--EEEC-------CCCSS-
T ss_pred ------eEEEEEeCC---CCeEEEEEE--C---C----EEEEEcCCCCCC------CCeEE--EEEe-------CCCCe-
Confidence 288888532 378999997 2 2 379999988653 24422 4555 23455
Q ss_pred ccccceEEEEEEEeCCeEEEEEeCCeeEEEEeeecCcccCCccEEEEEeCCCCcEEEEEEEEeeccccc
Q 005279 589 QSIWNIVYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNSAF 657 (704)
Q Consensus 589 ~~~~~~l~LrI~VD~SivEvF~n~Gr~v~TsRvYP~~~~~~~~~v~lf~~~~~~~v~~sl~iw~m~s~~ 657 (704)
++||||||+|+||||+|||+ |||+||||++. +.+|.+++++ .++++|+|+++|
T Consensus 379 ------~~l~i~vD~s~vEvF~n~G~-~~t~r~yp~~~---~~~i~~~~~~------~~~~~~~l~~~w 431 (432)
T 1w2t_A 379 ------NRIRAFLDSCSVEFFFNDSI-AFSFRIHPENV---YNILSVKSNQ------VKLEVFELENIW 431 (432)
T ss_dssp ------EEEEEEEETTEEEEEETTTE-EEEEECCCSSC---CCEEEEEEEE------EEEEEEEECCSC
T ss_pred ------eEEEEEEcCCEEEEEECCCE-EEEEEEeCCCC---CCeEEEEeCC------cEEEEEEchhhc
Confidence 89999999999999999999 99999999864 4678887631 378999999998
|
| >2yfr_A Levansucrase, inulosucrase; fructosyltransferase, glycoside hydrolase family GH68, trans sugar utilization; 1.75A {Lactobacillus johnsonii} PDB: 2yft_A* 2yfs_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-30 Score=290.76 Aligned_cols=271 Identities=16% Similarity=0.159 Sum_probs=182.3
Q ss_pred ccCC-CcceE-ECCEEEEEEe-eCCCCCCCCCcEEEEEEeC----CCcceeecccccccCCCCCCCcEEeeeEEEecCCc
Q 005279 131 MNDP-NGPVF-YKGWYHLFYQ-YNPNGAIWGDIVWGHAVSK----DLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGK 203 (704)
Q Consensus 131 mNDP-NG~~y-~~G~YHLFYQ-~nP~~~~wG~~~WGHAvS~----DLvhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~ 203 (704)
++|| +|-++ ++|+||+||+ ..|+ ++..||.|..++ ||+||+++|.++.|+.++ .|||||||++..||+
T Consensus 133 l~D~~~G~v~~~~G~~vvf~L~~dP~---~~d~Hi~~~ys~~g~~DLvhW~~~G~~~~~~~~~--~g~WSGSAi~~~DG~ 207 (571)
T 2yfr_A 133 VQDAKTGYVSNWNGYQLVIGMMGVPN---VNDNHIYLLYNKYGDNDFNHWKNAGPIFGLGTPV--IQQWSGSATLNKDGS 207 (571)
T ss_dssp BBCTTTCCBCCBTTEEEEEEEEECTT---SCCCEEEEEEEETTCCCGGGCEEEEETTCSCCTT--EEEEEEEEEECTTSC
T ss_pred EEecCCCcEEEecCceEEEEEccCCC---CCCcEEEEEECcCCccccCCccCCCeEcCCCCCC--CceECCeeEECcCCE
Confidence 4788 88887 7999999999 5555 688999999988 779999999999887544 799999998767999
Q ss_pred EEEEEecccCC--ceeeEEEEE-----e--CCCCCCccceeEeeCC-CceecCCC-C-------------CCCcCccCCe
Q 005279 204 LMMLYTGSTNE--SVQVQNLAY-----P--ADPSDPLLIKWVKYPG-NPVLVPPP-G-------------IGAKDFRDPT 259 (704)
Q Consensus 204 ~~~~YTG~~~~--~~q~q~lA~-----S--~D~~D~~l~~W~K~~~-nPVl~~p~-g-------------~~~~~fRDP~ 259 (704)
++|||||+... ..+.|++|. . .+.. ..+++|.+. .+|+.+++ . ....+||||+
T Consensus 208 l~LFYTG~~~~~~~~~~Q~Ia~a~~~l~~~~s~d---gv~~~kw~~~~~l~~~dg~~Yqt~~q~~~~~~~~~~~~FRDP~ 284 (571)
T 2yfr_A 208 IQLYYTKVDTSDNNTNHQKLASATVYLNLEKDQD---KISIAHVDNDHIVFEGDGYHYQTYDQWKETNKGADNIAMRDAH 284 (571)
T ss_dssp EEEEEEEEECTTTTCCEEEEEEEEEEEEEEGGGT---EEEEEEEEEEEEEECCCSSSBCCHHHHHHHCSSCCCCCCEEEE
T ss_pred EEEEEeccccCCCCcccceEEEEEeeeeecccCC---CcceecccCCCceecCCCcccccccccccccccCCcccCcCCe
Confidence 99999997642 224556554 2 1111 144444332 45554432 1 1468999999
Q ss_pred eEEecCCCeEEEEEeeecC------------------------------------------CeeEEEEEEeCCC----CC
Q 005279 260 TAWLTSEGKWRIAIGSRIN------------------------------------------RTGITFVYDTKDF----IN 293 (704)
Q Consensus 260 Vvw~~~~g~w~Mv~Gs~~~------------------------------------------~~G~~llY~S~Dl----~~ 293 (704)
||.+++|+|||++|++.. ..|+|.+|+|+|+ .+
T Consensus 285 -Vf~d~dG~~YMVfgA~t~~~~~~G~~~ly~w~~yg~~~~f~~~~~~~v~~~~~~~~~a~~~~G~IgL~~s~dl~~n~~~ 363 (571)
T 2yfr_A 285 -VIDDDNGNRYLVFEASTGTENYQGDDQIYQWLNYGGTNKDNLGDFFQILSNSDIKDRAKWSNAAIGIIKLNDDVKNPSV 363 (571)
T ss_dssp -EEECTTCCEEEEEEEEBCTTSCCSGGGGGBGGGTCSCHHHHHHHHHHHHHCHHHHHHHHHCCEEEEEEEECSCTTSCCE
T ss_pred -EEEeCCCCEEEEEEeccCCCCcccchhhccccccccccccchhhhccccccccccccchhccceEEEEEcCCCcCCccc
Confidence 564446999999999842 2599999999765 58
Q ss_pred cEEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCCC-----------------ceEE-EEEE
Q 005279 294 YELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDR-----------------HDYY-AIGT 355 (704)
Q Consensus 294 W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~~-----------------~~~Y-~iG~ 355 (704)
|++.++|..+.....|||||++|++++ +|||++|....+ ...| ++.
T Consensus 364 We~~~pL~~~~~v~dm~EcP~lf~~dG---------------~yyL~~S~q~~~~t~~~~~~~A~g~~g~~~~~y~~vS- 427 (571)
T 2yfr_A 364 AKVYSPLISAPMVSDEIERPDVVKLGN---------------KYYLFAATRLNRGSNDDAWMATNKAVGDNVAMIGYVS- 427 (571)
T ss_dssp EEECCCSEECTTTBSCCEEEEEEEETT---------------EEEEEEEEEGGGBSCHHHHHHHHHHHSCCEEEEEEEE-
T ss_pred ceeccccccCCCcCceeecCcEEEECC---------------EEEEEEeCCCCcccccccccccccCcCCceEEEEEEe-
Confidence 999999876533345999999999973 788888754311 2333 444
Q ss_pred eeCCceeeecCCCc-cccccceeeccC------CCcccceeecCCCCcEEEEEeeCCCCCccccccCCCCCCCCccEEEE
Q 005279 356 YHEKNVTWVPDNPE-IDVGIGIRYDYG------LFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQGIPRTVA 428 (704)
Q Consensus 356 ~d~~~~~f~p~~~~-~D~g~g~~lD~G------~fYA~qtf~d~~~gRrIl~GW~~~~d~~~~~~~~gWag~lslPRel~ 428 (704)
|.-.+.|.|-+.. + | ++..+..+ .|||.++..+ .+++++++||...... ...+|.|.++-+..|.
T Consensus 428 -dsl~GPy~plng~gl-V-L~~~~P~~~~~~tyS~Ya~p~~~~--~~~~lv~s~i~~r~~~---~~~~~~GTlap~~~vq 499 (571)
T 2yfr_A 428 -DNLTHGYVPLNESGV-V-LTASVPANWRTATYSYYAVPVEGR--DDQLLITSYITNRGEV---AGKGMHATWAPSFLLQ 499 (571)
T ss_dssp -SSSSSCCEETTTTSE-E-EECCSCTTSTTCEEEEEEEEETTE--EEEEEEEEEESCSTTT---TCTTCCCEECEEEEEE
T ss_pred -CCCCCCCeeCCCCce-e-ecCCCCCccccccceeEEEecccC--CCcEEEEEEeCCcCCC---CCcccceeecCcEEEE
Confidence 2224577763210 0 0 00001122 2566554332 3568899999987643 2467999999666566
Q ss_pred EccCCCc
Q 005279 429 LDTKTGS 435 (704)
Q Consensus 429 L~~~~G~ 435 (704)
++. +|+
T Consensus 500 ~~~-dgt 505 (571)
T 2yfr_A 500 INP-DNT 505 (571)
T ss_dssp EET-TTE
T ss_pred EcC-CCC
Confidence 753 554
|
| >1oyg_A Levansucrase; glycoside hydrolase, beta-propeller, TR; 1.50A {Bacillus subtilis} SCOP: b.67.2.2 PDB: 1pt2_A* 3byl_A 3byn_A* 3byk_A 3byj_A 2vdt_A 3om4_A* 3om7_C* 3om6_A* 3om5_A* 3om2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-29 Score=275.84 Aligned_cols=266 Identities=14% Similarity=0.148 Sum_probs=182.2
Q ss_pred cCCCcce-EECCEEEEEEeeCCCCCCCCCcEEEEEEeC----CCcceeecccccccC-------CCCC--CCcEEeeeEE
Q 005279 132 NDPNGPV-FYKGWYHLFYQYNPNGAIWGDIVWGHAVSK----DLIHWYHLPLAMVAD-------QWYD--IMGVWTGSAT 197 (704)
Q Consensus 132 NDPNG~~-y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~----DLvhW~~lp~AL~Pd-------~~yD--~~Gv~SGSav 197 (704)
.||+|-+ .++|++++||+..+... ++..||+|+.|+ ||+||++.+. +.|+ .+|| .+|||||||+
T Consensus 65 ~d~~G~~~~~~g~~lif~L~~dp~~-~~~~hi~~~ys~~g~~dl~~W~~~G~-vfp~~~~~~~~~~~~~~~~g~WSGSAi 142 (447)
T 1oyg_A 65 QNADGTVANYHGYHIVFALAGDPKN-ADDTSIYMFYQKVGETSIDSWKNAGR-VFKDSDKFDANDSILKDQTQEWSGSAT 142 (447)
T ss_dssp ECTTSSBCCBTTEEEEEEEEECTTC-TTCCEEEEEEEETTCCSGGGCEEEEE-SCCTTHHHHTTCTTGGGCCEEEEEEEE
T ss_pred ECCCCCEEEecCcEEEEEEcCCCCC-CCceEEEEEECcCCCcccCCccCCCe-ecCCCccccccccccCCCCCEECCceE
Confidence 4567755 46889999999875433 578999999999 6699999998 4455 3553 6899999998
Q ss_pred EecCCcEEEEEecccCC--ceeeEEEEE-----eCCCCCCccceeEeeCC-CceecCCC-C---------------CCCc
Q 005279 198 ILPDGKLMMLYTGSTNE--SVQVQNLAY-----PADPSDPLLIKWVKYPG-NPVLVPPP-G---------------IGAK 253 (704)
Q Consensus 198 v~~dG~~~~~YTG~~~~--~~q~q~lA~-----S~D~~D~~l~~W~K~~~-nPVl~~p~-g---------------~~~~ 253 (704)
++.||+++|||||+... ..|+++.|. +.|+ ++|++.+. ++|+.+.+ . -...
T Consensus 143 ~~~dG~i~LfYTg~~~~~~~~q~I~~a~~~l~~~~dg-----v~~~~~~~~~~l~~~Dg~~Yq~~~q~~~~~~~~~~~~~ 217 (447)
T 1oyg_A 143 FTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSS-----LNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNH 217 (447)
T ss_dssp ECTTSCEEEEEEEEEGGGTTEEEEEEEEEEEEECSSC-----EEEEEEEEEEEEECCCSSSBCCHHHHHHHTGGGGTCCC
T ss_pred ECcCCEEEEEEEeecCCCCCceEEEEEecceeecCCC-----cceecccCCCceEcCCCccccccccccccccccCCCcc
Confidence 76899999999998643 345544443 3432 45555432 56665432 1 1246
Q ss_pred CccCCeeEEecCCCeEEEEEeeecCC------------------------------------------eeEEEEE-EeCC
Q 005279 254 DFRDPTTAWLTSEGKWRIAIGSRINR------------------------------------------TGITFVY-DTKD 290 (704)
Q Consensus 254 ~fRDP~Vvw~~~~g~w~Mv~Gs~~~~------------------------------------------~G~~llY-~S~D 290 (704)
+||||+| |. .+|+|||++|++... .|+|.++ .|+|
T Consensus 218 ~fRDP~V-f~-d~G~~ymvfgA~t~~~~g~~~~~~l~~w~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~G~Igl~~~s~D 295 (447)
T 1oyg_A 218 TLRDPHY-VE-DKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDD 295 (447)
T ss_dssp CCEEEEE-EE-ETTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEEEEEECTT
T ss_pred ccCCCeE-Ee-ECCEEEEEEeeecCCCCcccchhhhcchhhcccCcccchhhhhhcccccccccchhcCcEEEEEEcCCC
Confidence 9999995 63 479999999998521 3788777 7999
Q ss_pred CCCcEEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCC--------CceEEEEE-EeeCCce
Q 005279 291 FINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDD--------RHDYYAIG-TYHEKNV 361 (704)
Q Consensus 291 l~~W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~--------~~~~Y~iG-~~d~~~~ 361 (704)
+.+|++.++|..+.....|||||++|++++ ||||++|.... ....|++| .=|.-.+
T Consensus 296 l~~W~~~~pL~~~~~v~d~~EcPdlfk~dG---------------kyyLf~S~~~s~~~~~g~~~~~vy~~g~vsdsl~G 360 (447)
T 1oyg_A 296 YTLKKVMKPLIASNTVTDEIERANVFKMNG---------------KWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTG 360 (447)
T ss_dssp SSEEEEEEEEEECTTTCSCCEEEEEEEETT---------------EEEEEEEEEGGGCCCTTCCTTCEEEEEEEESSTTC
T ss_pred CCCceEccccccCCCCCCceEcCcEEEECC---------------EEEEEEecCCCcccccCcCCCcEEEEEEEcCCCCC
Confidence 999999999876543345999999999973 88998886432 12467666 2233346
Q ss_pred eeecCCCc-cccc----cceeeccC-CCcccceeecCCCCcEEEEEeeCCCCCccccccCCCCCCCCccEEEEEc
Q 005279 362 TWVPDNPE-IDVG----IGIRYDYG-LFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQGIPRTVALD 430 (704)
Q Consensus 362 ~f~p~~~~-~D~g----~g~~lD~G-~fYA~qtf~d~~~gRrIl~GW~~~~d~~~~~~~~gWag~lslPRel~L~ 430 (704)
.|.|-+.. +=++ ...+++ + .+||.++. + .+++++++||...... ..|.|.++-+..|.++
T Consensus 361 Py~plngsGlVl~~~~p~~~~~~-~ys~ya~p~~-~--~~~~~v~sf~~~~~~~-----~~~ggtlap~~~v~~~ 426 (447)
T 1oyg_A 361 PYKPLNKTGLVLKMDLDPNDVTF-TYSHFAVPQA-K--GNNVVITSYMTNRGFY-----ADKQSTFAPSFLLNIK 426 (447)
T ss_dssp CCEEGGGTSEEEEECCCTTCTTC-EEEEEEECCS-S--SSEEEEEEEESCTTSC-----SSCCCEECBCEEEEEE
T ss_pred CCeeCCCCceeecCCCCCccccc-cceeEEEecC-C--CCeEEEEEEeCCCCcc-----cccceeecCcEEEEEc
Confidence 77763210 0000 000222 3 37888776 4 3589999999986432 4699999977777776
|
| >1w18_A Levansucrase; transferase, fructosyl transferase, glycosyltransferase; 2.5A {Gluconacetobacter diazotrophicus} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.6e-25 Score=244.29 Aligned_cols=197 Identities=15% Similarity=0.153 Sum_probs=144.7
Q ss_pred ccCCCc-ceEECCEEEEEEeeCCCCC--CCCCcEE----EEEEeCC---------CcceeecccccccCC--------CC
Q 005279 131 MNDPNG-PVFYKGWYHLFYQYNPNGA--IWGDIVW----GHAVSKD---------LIHWYHLPLAMVADQ--------WY 186 (704)
Q Consensus 131 mNDPNG-~~y~~G~YHLFYQ~nP~~~--~wG~~~W----GHAvS~D---------LvhW~~lp~AL~Pd~--------~y 186 (704)
++||+| +++++|+||+|||+.|... .|+.+|| ||+.|+| |+||++.+.+|.+.. .+
T Consensus 78 l~D~dg~~v~~~G~~~vF~L~a~r~~~~~~~drH~~a~I~~~yskdg~~~~~~~~l~~W~~~G~vf~~g~~~~~~~~~~~ 157 (493)
T 1w18_A 78 LIDKHADQFSYNGWEVIFCLTADPNAGYGFDDRHVHARIGFFYRRAGIPASRRPVNGGWTYGGHLFPDGASAQVYAGQTY 157 (493)
T ss_dssp EECTTCCBEEETTEEEEEEEEECTTSSCCGGGCGGGCEEEEEEEESSCCGGGSCTTCCCEEEEESSCTTGGGGGSTTSCC
T ss_pred EECCCCCEEEECCeEEEEEEecCCccCCCccCCCccceeeeEEecCccccccccccCCceECCccccCCCcccccccccc
Confidence 478999 8889999999999998865 4555555 4999999 899999998885543 35
Q ss_pred CCCcEEeeeEEEe--cCCcEEEEEecccC----C----ceeeEEEEEeC-----CCCCCccceeEeeCCCceecCCC-CC
Q 005279 187 DIMGVWTGSATIL--PDGKLMMLYTGSTN----E----SVQVQNLAYPA-----DPSDPLLIKWVKYPGNPVLVPPP-GI 250 (704)
Q Consensus 187 D~~Gv~SGSavv~--~dG~~~~~YTG~~~----~----~~q~q~lA~S~-----D~~D~~l~~W~K~~~nPVl~~p~-g~ 250 (704)
+..++|||||++. .||+++|||||... . ....|+||.+. +..+.-+.+|+|. .+|+.+.. .|
T Consensus 158 d~~~~WSGSAi~~~~~dG~i~LFYTg~~~~~~~~g~~~~~~~Q~Ia~a~~~l~a~~dgv~~~~w~k~--~~l~~~DG~~Y 235 (493)
T 1w18_A 158 TNQAEWSGSSRLMQIHGNTVSVFYTDVAFNRDANANNITPPQAIITQTLGRIHADFNHVWFTGFTAH--TPLLQPDGVLY 235 (493)
T ss_dssp SEEEEEEEEEEESSTTSCEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEE--EEEECCCSSSB
T ss_pred CcCCeEcCceEEeccCCCEEEEEEEecccccccccccCCcceeEEEEeccceeccCCCccccccccC--CceeecCcccc
Confidence 6789999999876 79999999999853 1 11357776332 2212246788886 56765421 12
Q ss_pred ------CCcCccCCeeEEecC-CCeEEEEEeeec--C---------------------------------CeeEEEE--E
Q 005279 251 ------GAKDFRDPTTAWLTS-EGKWRIAIGSRI--N---------------------------------RTGITFV--Y 286 (704)
Q Consensus 251 ------~~~~fRDP~Vvw~~~-~g~w~Mv~Gs~~--~---------------------------------~~G~~ll--Y 286 (704)
...+||||+|+..+. +|+|||+++++. + ..|++.+ +
T Consensus 236 qt~~q~~~~~fRDP~vf~D~~~dG~~YmvFeant~~~~g~~~~~~~~~~y~~~~~~~~~~~~~~~~~a~~~~g~IGLa~~ 315 (493)
T 1w18_A 236 QNGAQNEFFNFRDPFTFEDPKHPGVNYMVFEGNTAGQRGVANCTEADLGFRPNDPNAETLQEVLDSGAYYQKANIGLAIA 315 (493)
T ss_dssp CCTTTCTTCCCEEEEEEECTTSTTCEEEEEEEEBSSCTTCCCCCHHHHCCCTTCTTCCCHHHHHHTTGGGCCEEEEEEEE
T ss_pred ccccccCCccccCCEEEecCCCCCCEEEEEEeccCCCCcccccccccccccCCccccchhhhcccccchhccceEEEEEe
Confidence 247999999655432 499999999864 1 2466744 4
Q ss_pred EeCCCCCcEEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeC
Q 005279 287 DTKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMD 344 (704)
Q Consensus 287 ~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~ 344 (704)
+++|+.+|++.++++.+.....|||||++|++++ ||+|+.|..
T Consensus 316 ~s~Dl~~We~~~PL~~a~~v~deiErP~V~~~~G---------------kyYLFtSs~ 358 (493)
T 1w18_A 316 TDSTLSKWKFLSPLISANCVNDQTERPQVYLHNG---------------KYYIFTISH 358 (493)
T ss_dssp SSTTSCCEEEEEEEEECTTTBSCCEEEEEEEETT---------------EEEEEEEEC
T ss_pred CCCCCccceecCccccCCCCCCcEECCeEEEECC---------------EEEEEEEcc
Confidence 5579999999999887654456999999999973 888887643
|
| >3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4e-24 Score=232.88 Aligned_cols=171 Identities=21% Similarity=0.296 Sum_probs=138.7
Q ss_pred cccceeecCCC--------CccCCCcceEECCEEEEEEeeCCCCC-------------CCCCcEEEEEEeCCCcceeecc
Q 005279 119 RTAFHFQPQKN--------WMNDPNGPVFYKGWYHLFYQYNPNGA-------------IWGDIVWGHAVSKDLIHWYHLP 177 (704)
Q Consensus 119 Rp~~Hf~P~~g--------WmNDPNG~~y~~G~YHLFYQ~nP~~~-------------~wG~~~WGHAvS~DLvhW~~lp 177 (704)
|++||++|..| ||||||++++++|+||||||++|... .|+.++|+||+|+||+||++++
T Consensus 30 f~~~~~~P~~g~~~~~e~~~~~DP~~v~~~dG~Yymfyt~~~~~~~G~~~~~~~~~~~~w~~~~i~~a~S~DLv~W~~~g 109 (374)
T 3r4z_A 30 LFEFDITPLKGDLAYEEGVIRRDPSAVLKVDDEYHVWYTKGEGETVGFGSDNPEDKVFPWDKTEVWHATSKDKITWKEIG 109 (374)
T ss_dssp CEEEEEEECEETTSCCTTEEEECCCCBEEETTEEEEEEEEEESCCCCSSCSCTTSCSSTTTTCEEEEEEESSSSEEEEEE
T ss_pred HHhcccccccCCccccCCcCcCCCCeEEEECCEEEEEEEcCCCcccccccccccccccccCccEEEEEECCCCcCcEeCc
Confidence 88999999999 99999999999999999999987421 3788999999999999999999
Q ss_pred cccccCC--CCCCCcEEeeeEEEecCCcEEEEEecccCC----ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCC--
Q 005279 178 LAMVADQ--WYDIMGVWTGSATILPDGKLMMLYTGSTNE----SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPG-- 249 (704)
Q Consensus 178 ~AL~Pd~--~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~----~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g-- 249 (704)
.+|.|+. .||..+||+|+++. .+|+++||||++... ..+.|++|+|.|.. ..|+|. ++|||.+.+.
T Consensus 110 ~~l~~~~~~~~d~~gvwaPsvi~-~dGkyyL~Yt~~~~~~~~~~~~~igvA~Sdd~~----Gpw~~~-~~Pvi~~~~~~~ 183 (374)
T 3r4z_A 110 PAIQRGAAGAYDDRAVFTPEVLR-HNGTYYLVYQTVKAPYLNRSLEHIAIAYSDSPF----GPWTKS-DAPILSPENDGV 183 (374)
T ss_dssp EEECCCCTTSTTSSEEEEEEEEE-ETTEEEEEEEEECSSCCTTCCBEEEEEEESSTT----CCCEEC-SSCSBCCCCCSE
T ss_pred ccCCCCCCCCccCCCEECCEEEE-ECCEEEEEEEeccCCCCCCCcceEEEEEECCCC----CCeEEC-CCCEeCCCcCCc
Confidence 9998864 78899999999965 699999999997642 24789999998853 689996 7899986432
Q ss_pred ----------------CCCcCccCCeeEEecCCCeEEEEEeeecC-----Ce---eEEEEEEeCCCC-CcEEe
Q 005279 250 ----------------IGAKDFRDPTTAWLTSEGKWRIAIGSRIN-----RT---GITFVYDTKDFI-NYELL 297 (704)
Q Consensus 250 ----------------~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~-----~~---G~~llY~S~Dl~-~W~~~ 297 (704)
++...++||.| + +.+|+|||++++... .. -.+.+.+|+++. .|+..
T Consensus 184 w~~ddd~~~~~~~~~~~d~~~~~~P~v-~-~~~g~yyl~Y~~~~~~~~~~~~~~~~~igvA~sds~~Gpw~~~ 254 (374)
T 3r4z_A 184 WDTDEDNRFLVKEKGSFDSHKVHDPCL-M-FFNNRFYLYYKGETMGESMNMGGREIKHGVAIADSPLGPYTKS 254 (374)
T ss_dssp ECSSSSCTTCEEECCSTTSSEEEEEEE-E-EETTEEEEEEEEECTTCCEETTEECEEEEEEEESSTTCCCEEC
T ss_pred eeecCCceEEEecCCccccCccccceE-E-EECCEEEEEEEecCCCCccccCCCcceEEEEEECCCCCCCEEC
Confidence 12345789995 4 468999999987631 11 157778888754 68875
|
| >1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 | Back alignment and structure |
|---|
Probab=99.90 E-value=3e-23 Score=222.83 Aligned_cols=188 Identities=15% Similarity=0.098 Sum_probs=146.1
Q ss_pred CCCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeec-ccccccC--CCCCCCcE-EeeeEEEecCCc
Q 005279 128 KNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHL-PLAMVAD--QWYDIMGV-WTGSATILPDGK 203 (704)
Q Consensus 128 ~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~l-p~AL~Pd--~~yD~~Gv-~SGSavv~~dG~ 203 (704)
.|.+| +|+++++|+||||||+++. ++.++||||+|+|++||++. +++|.|+ ..++..|| |+++++. .+|+
T Consensus 54 ~gv~n--~~~i~~~g~~~lfY~~~~~---~~~~~~~~A~S~Dgi~w~~~~~pvl~p~~~~~~~~~g~~yDP~v~~-~~d~ 127 (338)
T 1vkd_A 54 ARVFN--SAVVPYNGEFVGVFRIDHK---NTRPFLHFGRSKDGINWEIEPEEIQWVDVNGEPFQPSYAYDPRVVK-IEDT 127 (338)
T ss_dssp EEEEE--EEEEEETTEEEEEEEEEET---TSCEEEEEEEESSSSSCEECSSCCCEECTTSCBCCCSSEEEEEEEE-ETTE
T ss_pred CeEEc--cEEEEECCEEEEEEEEECC---CCcEEEEEEEeCCCCccEECCCCEEeCCCCCccccCCEEeCcEEEE-ECCE
Confidence 46666 5889999999999999985 56799999999999999987 5788888 77888999 9999964 6889
Q ss_pred EEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEec-CCCeEEEEEeeec---CC
Q 005279 204 LMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLT-SEGKWRIAIGSRI---NR 279 (704)
Q Consensus 204 ~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~-~~g~w~Mv~Gs~~---~~ 279 (704)
++|+||+ .. ..+.|++|.|+|. ++|+|. ++++ .| ++|||. +|.+ .+|+|+|+++.+. +.
T Consensus 128 yym~yt~-~~-~~~~i~la~S~Dl-----~~W~~~--~~i~-~~------~~rd~~-~fp~~i~Gky~m~~~~q~~~~~~ 190 (338)
T 1vkd_A 128 YYITFCT-DD-HGPTIGVGMTKDF-----KTFVRL--PNAY-VP------FNRNGV-LFPRKINGKYVMLNRPSDNGHTP 190 (338)
T ss_dssp EEEEEEE-ES-SSEEEEEEEESSS-----SSEEEE--CCSS-SS------SEEEEE-ECSSCBTTBEEEEEEECCSSSCS
T ss_pred EEEEEEE-cC-CcceEEEEEECCC-----CeEEEC--CccC-CC------cCCceE-EEEEEECCEEEEEEEecCCCCCC
Confidence 9999999 65 3578999999984 899996 3443 21 469997 6653 3899999998753 35
Q ss_pred eeEEEEEEeCCCCCcEEecceeccCCCCC-cee------eeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCC--CCceE
Q 005279 280 TGITFVYDTKDFINYELLRGVLHGVPNTG-MWE------CVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDD--DRHDY 350 (704)
Q Consensus 280 ~G~~llY~S~Dl~~W~~~~~l~~~~~~~g-mWE------CPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~--~~~~~ 350 (704)
.|.+.+++|+||.+|+..+.++.. ..+ ||| ||+.|++++ .|+|..+... .....
T Consensus 191 ~~~I~~a~S~Dl~~W~~~~~l~~~--~~~~~wE~~~ig~gp~~i~~~~---------------gwll~y~G~~~~~~~~~ 253 (338)
T 1vkd_A 191 FGDIFLSESPDMIHWGNHRFVLGR--SSYNWWENLKIGAGPYPIETSE---------------GWLLIYHGVTLTCNGYV 253 (338)
T ss_dssp CCCEEEEEESSSSCBEEEEEEECC--CSSCGGGSSEEEECSCCEEETT---------------EEEEEEEEEEEETTEEE
T ss_pred CcEEEEEEcCCcccCCcCceEEcC--CCCCCcccCccccCCCcEEeCC---------------cEEEEEecccCCCCCcE
Confidence 678999999999999987776542 334 999 799998863 3777664321 12345
Q ss_pred EEEEE
Q 005279 351 YAIGT 355 (704)
Q Consensus 351 Y~iG~ 355 (704)
|.+|-
T Consensus 254 Y~~G~ 258 (338)
T 1vkd_A 254 YSFGA 258 (338)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77764
|
| >3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.9e-23 Score=227.40 Aligned_cols=176 Identities=20% Similarity=0.207 Sum_probs=136.6
Q ss_pred cccc-eeecCCC--------CccCCCcceEECCEEEEEEeeCCC-------------CCCCCCcEEEEEEeCCCcceeec
Q 005279 119 RTAF-HFQPQKN--------WMNDPNGPVFYKGWYHLFYQYNPN-------------GAIWGDIVWGHAVSKDLIHWYHL 176 (704)
Q Consensus 119 Rp~~-Hf~P~~g--------WmNDPNG~~y~~G~YHLFYQ~nP~-------------~~~wG~~~WGHAvS~DLvhW~~l 176 (704)
||.| |++|..| ++|||||+++++|+||||||++|. ...|+.++|+||+|+||+||++.
T Consensus 74 ~~~~~~~~p~~g~~~~~~~v~~~DP~~vi~~dG~Yylfyt~~~~~~~G~~~~~~~~~~~p~~~~~i~~A~S~Dlv~W~~~ 153 (408)
T 3p2n_A 74 FIQFGPLQPLKGDLAYEEGVVRRDPSAIIKENGKYYVWYSKSTGPTQGFGGDIEKDKVFPWDRCDIWYATSEDGWTWKEE 153 (408)
T ss_dssp CEEECCCEECEETTSCCTTEEEECCCCBEEETTEEEEEEEEEESCCCCSSSCTTTSCCSTTTTCEEEEEEESSSSEEEEE
T ss_pred hhcccccCCcCCCccccCCcEeCCCCEEEEECCEEEEEEEeCCCcccccccccccccccccccceEEEEEcCCCCeeeEe
Confidence 9999 9999999 999999999999999999998762 12356899999999999999999
Q ss_pred ccccccCC--CCCCCcEEeeeEEEecCCcEEEEEecccCC---c-eeeEEEEEeCCCCCCccceeEeeCCCceecCC---
Q 005279 177 PLAMVADQ--WYDIMGVWTGSATILPDGKLMMLYTGSTNE---S-VQVQNLAYPADPSDPLLIKWVKYPGNPVLVPP--- 247 (704)
Q Consensus 177 p~AL~Pd~--~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~---~-~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p--- 247 (704)
+.+|.|.. .||..++|+++++. .+|+++||||++... . .+.+++|++.... +. |++. ++||+.+.
T Consensus 154 g~~l~~~~~~~wd~~gv~aPsVi~-~dGkYyL~Yt~~~~~~~~~~~~~i~va~A~S~D---G~-W~~~-~~pli~~~~~~ 227 (408)
T 3p2n_A 154 GPAVTRGEKGAYDDRSVFTVEIMK-WEDKYYLCYQTVKSPYNVRVKNQVGLAWADSPD---GP-WTKS-EEPILSPADNG 227 (408)
T ss_dssp EEEECCCSTTSTTSSEEEEEEEEE-ETTEEEEEEEEECSSCCTTCCCEEEEEEESSTT---CC-CEEC-SSCSBCCCSCC
T ss_pred CceeCCCCCCCcccCceEeeEEEE-ECCEEEEEEEeecCCCCCcCCCceEEEEEECCC---CC-EEEC-CcceeCCCCCc
Confidence 99998865 78899999999864 799999999997421 1 2455666654321 35 9997 58888653
Q ss_pred ---------------CCCCCcCccCCeeEEecCCCeEEEEEeeecC------C--eeEEEEEEeCCCC-CcEEec--cee
Q 005279 248 ---------------PGIGAKDFRDPTTAWLTSEGKWRIAIGSRIN------R--TGITFVYDTKDFI-NYELLR--GVL 301 (704)
Q Consensus 248 ---------------~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~------~--~G~~llY~S~Dl~-~W~~~~--~l~ 301 (704)
..++...+++|.|+. .+|+|||++.+... . .-.+.+.+|+|+. .|+... +++
T Consensus 228 ~~~~e~d~~~~~~~~~~wd~~~v~~P~v~~--~~G~yyl~Ys~~~~g~~~~~~~~~~~igvA~Sdd~~Gpw~k~~~nPVl 305 (408)
T 3p2n_A 228 VWKGEEQDRFAVIKKGDFDSHKVHDPCIIP--YKGKFYLYYKGEQMGEAITFGGRQIRHGVAIADNPKGPYVKSPYNPIS 305 (408)
T ss_dssp EECSSSCCTTCEEECCSTTSSEEEEEEEEE--ETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTTCCCEECTTCCSC
T ss_pred eEEEecCCcccccccceecCCCeEcceEEE--ECCEEEEEEEcccCccccccCCCccEEEEEEECCCCCCcEECCCCCcc
Confidence 234445679999653 58999999987641 1 1356788999987 899854 454
Q ss_pred c
Q 005279 302 H 302 (704)
Q Consensus 302 ~ 302 (704)
.
T Consensus 306 ~ 306 (408)
T 3p2n_A 306 N 306 (408)
T ss_dssp S
T ss_pred c
Confidence 4
|
| >4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A | Back alignment and structure |
|---|
Probab=99.90 E-value=6.1e-23 Score=225.59 Aligned_cols=171 Identities=20% Similarity=0.236 Sum_probs=134.2
Q ss_pred cccceeecCC-------CCc-cCCCcceEECCEEEEEEeeCCCCC-------------CCCCcEEEEEEeCCCcceeecc
Q 005279 119 RTAFHFQPQK-------NWM-NDPNGPVFYKGWYHLFYQYNPNGA-------------IWGDIVWGHAVSKDLIHWYHLP 177 (704)
Q Consensus 119 Rp~~Hf~P~~-------gWm-NDPNG~~y~~G~YHLFYQ~nP~~~-------------~wG~~~WGHAvS~DLvhW~~lp 177 (704)
+++||..|.. ||+ |||||+++++|+||||||++|... .|+.++|+||+|+||+||++.+
T Consensus 70 f~r~~~~Pi~g~~~~~~g~~~~DP~~v~~~dG~yymfY~~~~~~~~G~~~~~~~~~~~~~~~~~i~~a~S~Dlv~W~~~g 149 (404)
T 4ak5_A 70 FFEYKMEPLKGDLAYEEGVVRRDPSAMLKIGDTYYVWYSKSYGPTQGFAGDIEKDKVFPWDRCDIWYATSKDGLTWKEQG 149 (404)
T ss_dssp CCEEEEEECEETTSCCTTEEEECCCCBEEETTEEEEEEEEEESCCCCSSSCTTTSCCSTTTTCEEEEEEESSSSEEEEEE
T ss_pred hhhcccccccCCcccccceeecCCcEEEEECCEEEEEEEeCCCcccccccccccccccccCccEEEEEECCCCCCceeCc
Confidence 5555555554 588 999999999999999999998411 3778999999999999999999
Q ss_pred cccccC--CCCCCCcEEeeeEEEecCCcEEEEEecccCC----ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCC--
Q 005279 178 LAMVAD--QWYDIMGVWTGSATILPDGKLMMLYTGSTNE----SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPG-- 249 (704)
Q Consensus 178 ~AL~Pd--~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~----~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g-- 249 (704)
.+|.|+ ..||..+||+++++. .+|+++|+||+.... ..+.+++|+|.+.. ..|++. ++|||.+.++
T Consensus 150 ~~L~~~~~~~wd~~gv~aP~Vi~-~~Gkyym~Yt~~~~~~~~~~~~~IgvA~Sdsp~----Gpwt~~-~~Pvl~~~~~~~ 223 (404)
T 4ak5_A 150 IAVKRGEKGAYDDRSVFTPEVME-WKGKYYLCYQAVKSPYTVRVKNTIGMACADSPE----GLWTKT-DKPVLEPSDTGE 223 (404)
T ss_dssp EEECCCSTTSTTSSEEEEEEEEE-ETTEEEEEEEEECSCCCTTCCCEEEEEEESSTT----CCCEEC-SSCSBCCCSCCE
T ss_pred eEeecCCCCccccCCEEeeEEEE-ECCEEEEEEEeccCCCCCCCcceEEEEEEeCCC----CCceEC-CCceecCCCCcc
Confidence 999885 478899999999964 699999999997642 34678999998642 479995 6899986432
Q ss_pred ----------------CCCcCccCCeeEEecCCCeEEEEEeeec-C----C---eeEEEEEEeCCCC-CcEEe
Q 005279 250 ----------------IGAKDFRDPTTAWLTSEGKWRIAIGSRI-N----R---TGITFVYDTKDFI-NYELL 297 (704)
Q Consensus 250 ----------------~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~-~----~---~G~~llY~S~Dl~-~W~~~ 297 (704)
++...++||.|+. .+|+|||++.+.. + . .-++.+..|+|+. .|+..
T Consensus 224 W~~ddd~~~~~~~~~~wD~~~~~~P~v~~--~~g~yyl~Ysg~~~~~~~~~~~~~~~igvA~Sdd~~Gpw~k~ 294 (404)
T 4ak5_A 224 WEGDEDNRFKVVSKGDFDSHKVHDPCIIP--YNGKFYMYYKGERMGEEITWGGREIKHGVAIAENPMGPYVKS 294 (404)
T ss_dssp ECSSSSCTTCEEECCSTTSSEEEEEEEEE--ETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTTCCCEEC
T ss_pred eeeccCceeeeccCCcccCCcEECCEEEE--ECCEEEEEEECCCCCCccccCCCcceEEEEEECCCCCCcEEC
Confidence 2234578999653 6899999998763 1 1 1267888999986 79875
|
| >3qz4_A Endo-1,4-beta-xylanase D; 5-bladed beta-propeller fold, xylan degradation, structural joint center for structural genomics, JCSG; HET: EPE; 1.74A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.2e-21 Score=205.37 Aligned_cols=190 Identities=15% Similarity=0.192 Sum_probs=144.3
Q ss_pred CCccCCCcceEEC--CEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCC--CCCCCcEEeeeEEEec---C
Q 005279 129 NWMNDPNGPVFYK--GWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQ--WYDIMGVWTGSATILP---D 201 (704)
Q Consensus 129 gWmNDPNG~~y~~--G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~--~yD~~Gv~SGSavv~~---d 201 (704)
||++||+ +++.+ |+||||+++.++ +.|+.++|.|++|+||+||+..+.+|.+.. .++..++|+++++..+ +
T Consensus 13 g~~~DP~-i~~~~~dg~yyl~~t~~~~-~~~~~~~~~~~~S~DLv~W~~~g~~l~~~~~~~~~~~~~wAP~v~~~~~~~~ 90 (311)
T 3qz4_A 13 GFHADPE-VLYSHQTKRYYIYPTSDGF-PGWGGSYFKVFSSKNLKTWKEETVILEMGKNVSWANGNAWAPCIEEKKIDGK 90 (311)
T ss_dssp SSEEEEE-EEEETTTTEEEEEEEECSS-GGGCCCEECCEEESSSSSCEECCCCEEBTTTBTTEEEEEEEEEEEEEEETTE
T ss_pred CCcCCce-EEEECCCCEEEEEEecCCC-CCCCCcEEEEEECCCCCCcEECceecccccCCCcccCCcCCCeeEEeeecCC
Confidence 7899999 88887 999999998776 568889999999999999999999998764 5667899999997643 9
Q ss_pred CcEEEEEecccCC-ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecC-CCeEEEEEeeecCC
Q 005279 202 GKLMMLYTGSTNE-SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTS-EGKWRIAIGSRINR 279 (704)
Q Consensus 202 G~~~~~YTG~~~~-~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~-~g~w~Mv~Gs~~~~ 279 (704)
|+++|+||+.... ..+.+++|+|+|.. ..|++ .++||+...+. +..++|||.+++ ++ +|++||++|+
T Consensus 91 Gkyylyyt~~~~~~~~~~i~va~s~~p~----Gpw~~-~~~p~~~~~~~-g~~~~iDp~vf~-dd~dG~~yl~~g~---- 159 (311)
T 3qz4_A 91 YKYFFYYSANPTTNKGKQIGVAVADSPT----GPFTD-LGKPIITSSPT-GRGQQIDVDVFT-DPVSGKSYLYWGN---- 159 (311)
T ss_dssp EEEEEEEEEEETTCSSCEEEEEEESSTT----CCCEE-CSSCSBCSCTT-SSSBSCCCEEEE-CTTTCCEEEEECB----
T ss_pred CEEEEEEEeccCCCCCeeEEEEEECCCC----CCceE-CCcceEcCCCC-CCcccccccEEE-ECCCCcEEEEEcC----
Confidence 9999999997542 24789999998753 58998 46788874321 135789999655 55 8999999986
Q ss_pred eeEEEEEE-eCCCCCcEEecceeccCCC-----CCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCCC
Q 005279 280 TGITFVYD-TKDFINYELLRGVLHGVPN-----TGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDR 347 (704)
Q Consensus 280 ~G~~llY~-S~Dl~~W~~~~~l~~~~~~-----~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~~ 347 (704)
|.+.+.+ ++|+.+|.-....+....+ ..++|||.+|+.++ +++|..|.....
T Consensus 160 -~~i~~~~l~~d~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~g---------------~YyL~~s~~~~~ 217 (311)
T 3qz4_A 160 -GYMAGAELNDDMLSIKEETTVVLTPKGGTLQTYAYREAPYVIYRKG---------------IYYFFWSVDDTG 217 (311)
T ss_dssp -SSCEEEEBCTTSSSBCGGGCEECCCCCCCTTTTCCCEEEEEEEETT---------------EEEEEEEESCTT
T ss_pred -CCEEEEEeCCcccccCCCceEEeCCCCCcccccceeeccEEEEECC---------------EEEEEEEcCCCC
Confidence 2234455 7888887643322222111 23899999999853 788888876543
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-20 Score=205.05 Aligned_cols=149 Identities=17% Similarity=0.223 Sum_probs=116.5
Q ss_pred cceEECCEEEEEEeeCCCCCC---CCCcEEEEEEeCCCcceeecc-cccccCCCCCC-----CcEEeeeEEEecCCcEEE
Q 005279 136 GPVFYKGWYHLFYQYNPNGAI---WGDIVWGHAVSKDLIHWYHLP-LAMVADQWYDI-----MGVWTGSATILPDGKLMM 206 (704)
Q Consensus 136 G~~y~~G~YHLFYQ~nP~~~~---wG~~~WGHAvS~DLvhW~~lp-~AL~Pd~~yD~-----~Gv~SGSavv~~dG~~~~ 206 (704)
++++++|+||||||+++.... ++.++||||+|+|++||++.+ ++|.|+..++. .||++++++..+||+++|
T Consensus 57 ~ai~~dGky~LfY~~~~~~~~~~~~~~~~ig~A~S~DGi~w~~~~~Pvl~P~~~~~~~~e~~~gv~DP~v~~~edG~yym 136 (364)
T 3qc2_A 57 AATLYNGEIVVLYRAEDKSGVGIGHRTSRLGYATSTDGTHFQREKTPVFYPDNDSQKELEWPGGCEDPRIAVTDDGLYVM 136 (364)
T ss_dssp EEEEETTEEEEEEEEECSSSSSTTCSCEEEEEEEESSSSSCEECSSCSBCCCSSTTHHHHTTTEEEEEEEEECTTSCEEE
T ss_pred eEEEECCEEEEEEEEECCCCcccCCCceEEEEEEeCCCceeeEcCcCeEcCCCccccccccCCcEECCEEEEeCCCEEEE
Confidence 578899999999999998654 478999999999999999864 67889987764 799999997656899999
Q ss_pred EEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCC--CCCCcCccCCeeE--------E-ecCCCeEEEEEee
Q 005279 207 LYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPP--GIGAKDFRDPTTA--------W-LTSEGKWRIAIGS 275 (704)
Q Consensus 207 ~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~--g~~~~~fRDP~Vv--------w-~~~~g~w~Mv~Gs 275 (704)
+||+.... .+.|++|+|+|. ++|+|. .+++.+.. .+....++|+.++ + .+.+|+|+|+.|.
T Consensus 137 ~Yta~~~~-~~~i~lA~S~Dl-----~~W~k~--g~i~~p~~~g~f~~~~~kd~~i~~~~r~~~lfp~ki~GkY~M~~g~ 208 (364)
T 3qc2_A 137 MYTQWNRH-VPRLAVATSRNL-----KDWTKH--GPAFAKAFDGKFFNLGCKSGSILTEVVKGKQVIKKVNGKYFMYWGE 208 (364)
T ss_dssp EEEEECSS-CEEEEEEEESSS-----SSCEEE--EETTSSHHHHTTTTCCCCCEEEEEEEETTEEEECEETTEEEEEECS
T ss_pred EEEecCCC-CeEEEEEEECCC-----CEEEEe--eeccCccccccccccccccceeeeeccccceeeEEECCEEEEEEcC
Confidence 99997643 578999999994 899997 35553310 1112244677632 1 2578999999862
Q ss_pred ecCCeeEEEEEEeCCCCCcEEe
Q 005279 276 RINRTGITFVYDTKDFINYELL 297 (704)
Q Consensus 276 ~~~~~G~~llY~S~Dl~~W~~~ 297 (704)
+.+.+++|+||++|+..
T Consensus 209 -----~~I~la~S~Dl~~W~~~ 225 (364)
T 3qc2_A 209 -----EHVFAATSDDLIHWTPI 225 (364)
T ss_dssp -----SSBEEEEESSSSSEEEC
T ss_pred -----CeEEEEeCCCcccceEc
Confidence 56778999999999974
|
| >3vss_A Beta-fructofuranosidase; glycoside hydrolase family 68, beta-propeller, hydrolase; HET: FRU; 1.97A {Arthrobacter} PDB: 3vsr_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-20 Score=211.05 Aligned_cols=198 Identities=16% Similarity=0.157 Sum_probs=139.8
Q ss_pred ccCCCc-ceEECCEEEEEEeeCCCCCCCC----CcEEEEEE---------eCCCcceeecccccccCC--------CCCC
Q 005279 131 MNDPNG-PVFYKGWYHLFYQYNPNGAIWG----DIVWGHAV---------SKDLIHWYHLPLAMVADQ--------WYDI 188 (704)
Q Consensus 131 mNDPNG-~~y~~G~YHLFYQ~nP~~~~wG----~~~WGHAv---------S~DLvhW~~lp~AL~Pd~--------~yD~ 188 (704)
+.|+.| ++-++|++|+|++..|....|. ....||.. |.|+.||++.+.++.+.. .++.
T Consensus 80 lqd~~g~~~~~~Gy~lvf~L~a~~~~~~~drH~~a~iglfy~k~G~~~~~s~d~~~W~~~G~vf~~~~~~~~~~~~~~~~ 159 (496)
T 3vss_A 80 LTDEDANQYSVNGWEIIFSLVADRNLGFDDRHVFAKIGYFYRPAGVPAAERPENGGWTYGGLVFKEGVTGQIFEDQSFSH 159 (496)
T ss_dssp EECTTCCBEEETTEEEEEEEEEETTSCGGGGGGGCEEEEEEEESSCCTTTSCTTCCCEEEEESSCTTSGGGGCSCTTCSE
T ss_pred eECCCCCEEEECCEEEEEEEEcCCCCCCCcCcceeEEeeeeccCCcccccCcccCCcEECccccCCCCCcccccCCCccC
Confidence 467887 6778999999999876554443 45668855 456779999987775432 2333
Q ss_pred CcEEeeeEEEecCCcEEEEEecccC--------CceeeEEEEEeCCC--CCCccceeEeeCCCceecCCCCC--------
Q 005279 189 MGVWTGSATILPDGKLMMLYTGSTN--------ESVQVQNLAYPADP--SDPLLIKWVKYPGNPVLVPPPGI-------- 250 (704)
Q Consensus 189 ~Gv~SGSavv~~dG~~~~~YTG~~~--------~~~q~q~lA~S~D~--~D~~l~~W~K~~~nPVl~~p~g~-------- 250 (704)
..-|||||++..||++.||||+... ...+.|+||.+... .|...++|++++.+++|..+++.
T Consensus 160 ~~eWSGSAi~~~DG~i~LFYT~v~~~~~~~g~~~~~~~Q~ia~A~~~i~~d~dgv~~~~~~~~~~l~~~DG~~Yqt~~q~ 239 (496)
T 3vss_A 160 QTQWSGSARVSKNGEIKLFFTDVAFYRNSDGTNIKPYDPRIALSVGKVKANKKGVTLTGFNKVTDLLQADGTYYQTGAQN 239 (496)
T ss_dssp EEEEEEEEEECTTCEEEEEEEEEEECBCTTSCBSSCCEEEEEEEEEEEEEETTEEEEEEEEEEEEEECCCSSSBCCTTTC
T ss_pred CceEecceEECCCCeEEEEEEEeecccCCCccccccceeEEEEEeeeeeecCCcceEeccCCCcccccCChhhhhccccc
Confidence 4579999998899999999998731 12356666654310 11123788888878877654431
Q ss_pred CCcCccCCeeEEe-cCCCeEEEEEeeecC-----------------------------------CeeEEEE--EEeCCCC
Q 005279 251 GAKDFRDPTTAWL-TSEGKWRIAIGSRIN-----------------------------------RTGITFV--YDTKDFI 292 (704)
Q Consensus 251 ~~~~fRDP~Vvw~-~~~g~w~Mv~Gs~~~-----------------------------------~~G~~ll--Y~S~Dl~ 292 (704)
...+||||+|+++ +.+|.+||++.+... ..|++.| ++|+|+.
T Consensus 240 ~~~~fRDP~vf~DP~~dG~~YLVFEgnT~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~anG~IGLa~~~s~D~~ 319 (496)
T 3vss_A 240 EFFNFRDPFTFEDPAHPGETFMVFEGNSAMQRETATCNEADLGYRQGDPYAETVDDVNASGATYQIGNVGLAKAKNKQLT 319 (496)
T ss_dssp TTCCCEEEEEECCTTSTTCCEEEEEEEBSSCGGGCCCCHHHHCCCTTCTTCCCHHHHHHHTGGGCEEEEEEEEESSTTSC
T ss_pred cccccCCCeeEecCCCCCcEEEEEecccCCcCccccccccccccccccccccccccccccccccccceEEEEEccCCCCC
Confidence 3468999996543 247889999866421 1466654 4689999
Q ss_pred CcEEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEee
Q 005279 293 NYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASM 343 (704)
Q Consensus 293 ~W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~ 343 (704)
.|++.++|+.+....+|||||++|++++ ||+|+.+.
T Consensus 320 ~We~~~PL~~a~~v~deiErP~vf~~dG---------------KyYLFt~s 355 (496)
T 3vss_A 320 EWEFLPPILSANCVTDQTERPQIYFKDG---------------KSYLFTIS 355 (496)
T ss_dssp CEEEEEEEEEEETTBSCCEEEEEEEETT---------------EEEEEEEE
T ss_pred ccEEeCccccCCCCCCceeCCcEEEECC---------------EEEEEEec
Confidence 9999999987655556999999999973 89998864
|
| >3qee_A Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; 5-bladed beta propeller, hydrolase; 1.64A {Cellvibrio japonicus} PDB: 3qed_A* 3qef_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.4e-19 Score=191.57 Aligned_cols=198 Identities=14% Similarity=0.120 Sum_probs=145.6
Q ss_pred CCccCCCcceEECCEEEEEEeeCCCC---CCCCCcEEEEEEeCCCcceeecccccccC-CCCCCCcEEeeeEEEecCCcE
Q 005279 129 NWMNDPNGPVFYKGWYHLFYQYNPNG---AIWGDIVWGHAVSKDLIHWYHLPLAMVAD-QWYDIMGVWTGSATILPDGKL 204 (704)
Q Consensus 129 gWmNDPNG~~y~~G~YHLFYQ~nP~~---~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd-~~yD~~Gv~SGSavv~~dG~~ 204 (704)
.+.+||+.+ .++|+||||+++.+.. +.++...|.+++|+||+||+..+.+|.+. ..++..++|+++++. .+|++
T Consensus 10 ~~~~DP~i~-~~~g~yYl~~t~~~~~~~~~~~~~~~~~v~~S~DLv~W~~~g~~l~~~~~~~~~~~~WAP~i~~-~~Gky 87 (307)
T 3qee_A 10 VFTADPAAL-VHKGRVYLYAGRDEAPDNTTFFVMNEWLVYSSDDMANWEAHGPGLRAKDFTWAKGDAWASQVIE-RNGKF 87 (307)
T ss_dssp SEEEEEEEE-EETTEEEEEEEEECCSSSSSCCCEEEEEEEEESSSSSCEEEEEEEEGGGSTTEEEEEEEEEEEE-ETTEE
T ss_pred CccCCCceE-EECCEEEEEEccCcccCCccccccCcEEEEECCCCCCceECccccccCCCCcccCCccCceEEE-ECCEE
Confidence 356999965 5899999999988764 46777899999999999999999998864 356678999999964 79999
Q ss_pred EEEEecccCCc--eeeEEEEEeCCCCCCccceeEeeCCCceecCC-CCC--CCcCccCCeeEEecCCCeEEEEEeeecCC
Q 005279 205 MMLYTGSTNES--VQVQNLAYPADPSDPLLIKWVKYPGNPVLVPP-PGI--GAKDFRDPTTAWLTSEGKWRIAIGSRINR 279 (704)
Q Consensus 205 ~~~YTG~~~~~--~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p-~g~--~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~ 279 (704)
+||||+..... .+.+++|+|++.. ..|++..++|++... ... ...+++||.+++ +++|++||++|+.
T Consensus 88 ylyyt~~~~~~~~~~~i~va~s~~p~----Gpw~~~~~~pl~~~~~~~~~~~~~~~iDp~vf~-DddG~~Yl~~g~~--- 159 (307)
T 3qee_A 88 YWYVTVRHDDTKPGFAIGVAVGDSPI----GPFKDALGKALITNDMTTDTPIDWDDIDPSVFI-DDDGQAYLFWGNT--- 159 (307)
T ss_dssp EEEEEEEECTTSCSEEEEEEEESSTT----CCCEESSSSCSBCGGGCCSSCCSCCSCCCEEEE-CTTSCEEEEECSS---
T ss_pred EEEEEeccCCCCCceEEEEEEECCCC----CCCEeCCCCeeEecCccccCCCCcCcccCceEE-CCCCCEEEEEeCC---
Confidence 99999986432 3789999998753 589996567888631 111 123589999654 6789999999864
Q ss_pred eeEEEEEEeCCCCCcEEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCCCceEEEEE
Q 005279 280 TGITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIG 354 (704)
Q Consensus 280 ~G~~llY~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~~~~~Y~iG 354 (704)
++.++--++|+.+|.-....+. ...+++|||.+|+.++ +++|.+|........|+..
T Consensus 160 -~i~~~~l~~d~~~~~g~~~~i~--~~~~~~EgP~i~k~~g---------------~YyL~~s~~~~~~~~~~~s 216 (307)
T 3qee_A 160 -RPRYAKLKKNMVELDGPIRAIE--GLPEFTEAIWVHKYQD---------------NYYLSYAMGFPEKIGYAMG 216 (307)
T ss_dssp -SCEEEEECTTSSSEEEEEEECC--CCTTEEEEEEEEECC----------------CEEEEEEETTTTEEEEEEE
T ss_pred -cEEEEEECCccccccCceEEeC--CCCCccCceEEEEECC---------------EEEEEEECCCCcEEEEEEC
Confidence 3334445889988864332222 1235899999999863 7888888765444455554
|
| >1gyh_A Arabinan endo-1,5-alpha-L-arabinosidase A; arabinanase, hydrolase, propeller, catalysis, pseudomonas; 1.89A {Cellvibrio cellulosa} SCOP: b.67.2.1 PDB: 1gyd_B 1gye_B* | Back alignment and structure |
|---|
Probab=99.80 E-value=2e-18 Score=182.90 Aligned_cols=182 Identities=14% Similarity=0.106 Sum_probs=130.7
Q ss_pred CccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCC-------CCcEEeeeEEEecCC
Q 005279 130 WMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYD-------IMGVWTGSATILPDG 202 (704)
Q Consensus 130 WmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD-------~~Gv~SGSavv~~dG 202 (704)
+++||+. ++++|+||||+++ .+|+|++|+||+||+..+.||.+...++ ..++|+++++. .+|
T Consensus 6 ~~~DP~i-~~~~g~yyl~~t~---------~~i~~~~S~DL~~W~~~g~~l~~~~~~~~~~~~~~~~~~wAP~v~~-~~g 74 (318)
T 1gyh_A 6 DVHDPVM-TREGDTWYLFSTG---------PGITIYSSKDRVNWRYSDRAFATEPTWAKRVSPSFDGHLWAPDIYQ-HKG 74 (318)
T ss_dssp CCSSCEE-EEETTEEEEEESE---------ETCEEEEESSSSEEEEEEESSSSCCTTHHHHCTTCCSEEEEEEEEE-ETT
T ss_pred ecCCCEE-EEECCEEEEEECC---------CCcEEEECCCCCCccCCCcccCCCcccccccCCCcCcccccCeEEE-ECC
Confidence 6899986 7889999999997 2589999999999999999998875554 47899999975 699
Q ss_pred cEEEEEecccCC-ceeeEEEEEeCCCCCCccc--eeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCC
Q 005279 203 KLMMLYTGSTNE-SVQVQNLAYPADPSDPLLI--KWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINR 279 (704)
Q Consensus 203 ~~~~~YTG~~~~-~~q~q~lA~S~D~~D~~l~--~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~ 279 (704)
+++|+||+.... ..+.+++|++++. ||..- +|++. ++|+...+.....++|||.+++ +++|++||+.|+..
T Consensus 75 ~~ylyyt~~~~~~~~~~igva~s~~~-dp~gp~~~w~~~--~~v~~~~~~~~~~~~iDp~vf~-D~dG~~Yl~~g~~~-- 148 (318)
T 1gyh_A 75 LFYLYYSVSAFGKNTSAIGVTVNKTL-NPASPDYRWEDK--GIVIESVPQRDLWNAIAPAIIA-DDHGQVWMSFGSFW-- 148 (318)
T ss_dssp EEEEEEEECCTTSCCEEEEEEEESCS-CTTSTTCCCEEE--EEEEEECTTTCSSCCCCCEEEE-CTTSCEEEEECBST--
T ss_pred EEEEEEEeccCCCCcceEEEEEeCCC-CCCCCCcceecC--CcccccCCCCCCCCcccCCeEE-CCCCCEEEEeeccC--
Confidence 999999987543 3577899999862 33322 29885 5676542222335689999654 57899999998742
Q ss_pred eeEEEEEE-eCC------CCCcEEec----c--eeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeC
Q 005279 280 TGITFVYD-TKD------FINYELLR----G--VLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMD 344 (704)
Q Consensus 280 ~G~~llY~-S~D------l~~W~~~~----~--l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~ 344 (704)
+.+.+++ ++| +..|+... + +........++|||.+|+.++ +++|.+|..
T Consensus 149 -~~i~~~~l~~d~~~~g~~~~w~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~g---------------~yYL~~s~~ 210 (318)
T 1gyh_A 149 -GGLKLFKLNDDLTRPAEPQEWHSIAKLERSVLMDDSQAGSAQIEAPFILRKGD---------------YYYLFASWG 210 (318)
T ss_dssp -TCEEEEEBCTTSSSBCSSCCEEEEECCCCCTTSCTTSCCSCCEEEEEEEEETT---------------EEEEEEEES
T ss_pred -CCEEEEEeCCccccccceeecceecccCcceeecccCCCCcceeccEEEEECC---------------EEEEEEEeC
Confidence 2344555 455 34676531 1 111112235999999999853 788888864
|
| >1uv4_A Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hydrolase, propeller, catalysis; 1.50A {Bacillus subtilis} SCOP: b.67.2.1 | Back alignment and structure |
|---|
Probab=99.79 E-value=8.8e-18 Score=175.84 Aligned_cols=183 Identities=15% Similarity=0.097 Sum_probs=130.6
Q ss_pred CccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCC-------CCcEEeeeEEEecCC
Q 005279 130 WMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYD-------IMGVWTGSATILPDG 202 (704)
Q Consensus 130 WmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD-------~~Gv~SGSavv~~dG 202 (704)
+++||+. ++++|+||||++..+. ..+|.+++|+||+||+..+.||.+...++ ..++|+++++. .+|
T Consensus 11 ~~~DP~i-~~~~g~yYl~~t~~~~-----~~~i~i~~S~DLv~W~~~g~~l~~~~~w~~~~~~~~~~~~wAP~v~~-~~G 83 (293)
T 1uv4_A 11 LLHDPTM-IKEGSSWYALGTGLTE-----ERGLRVLKSSDAKNWTVQKSIFTTPLSWWSNYVPNYGQNQWAPDIQY-YNG 83 (293)
T ss_dssp ECSSCEE-EEETTEEEEEEECCTT-----SSBEEEEEESSSSSCEEEEEETSSCCGGGGGTSTTCCSBCEEEEEEE-ETT
T ss_pred cCCCCeE-EEECCEEEEEEcCCCC-----CCceEEEECCCCCCccCCCccCCCCCcccccccccCCCceecceEEE-ECC
Confidence 4789985 5579999999998763 35799999999999999999988764433 36899999965 699
Q ss_pred cEEEEEecccCC-ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCee
Q 005279 203 KLMMLYTGSTNE-SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTG 281 (704)
Q Consensus 203 ~~~~~YTG~~~~-~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G 281 (704)
+++|+||+.... ..+.+++|+|+|.. ...|++. .++|..++. ...+++||.+++ +++|++||+.|+.. .|
T Consensus 84 ~yylyyt~~~~~~~~~~i~va~s~~p~---~Gpw~~~--~~~l~~~~~-~~~~~iDp~vf~-d~dG~~Yl~~g~~~--~~ 154 (293)
T 1uv4_A 84 KYWLYYSVSSFGSNTSAIGLASSTSIS---SGGWKDE--GLVIRSTSS-NNYNAIDPELTF-DKDGNPWLAFGSFW--SG 154 (293)
T ss_dssp EEEEEEEECCTTCSCEEEEEEEESCTT---TTCCEEE--EEEEEECTT-SSSCCCSCEEEE-CTTSCEEEEECBST--TC
T ss_pred EEEEEEEecCCCCCcceEEEEECCCCC---CCCCccC--CccEecCCC-CCCCCCCCCeEE-CCCCCEEEEEEecC--CC
Confidence 999999987542 35678999998741 1379985 345543221 134789999655 57899999998642 23
Q ss_pred EEEEEE-eCCCCCcEEecc-eeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeC
Q 005279 282 ITFVYD-TKDFINYELLRG-VLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMD 344 (704)
Q Consensus 282 ~~llY~-S~Dl~~W~~~~~-l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~ 344 (704)
+.+++ ++|+..+.-... +.....+..++|||.+|+.++ +++|..|..
T Consensus 155 -i~~~~l~~d~~~~~g~~~~i~~~~~~~~~~EgP~i~k~~g---------------~yyL~~s~~ 203 (293)
T 1uv4_A 155 -IKLTKLDKSTMKPTGSLYSIAARPNNGGALEAPTLTYQNG---------------YYYLMVSFD 203 (293)
T ss_dssp -EEEEEECTTTCSEEEEEEEEECCTTTTTCEEEEEEEEETT---------------EEEEEEEEE
T ss_pred -EEEEEECchhCccCCcceEEeecCCCCCccCccEEEEECC---------------EEEEEEEeC
Confidence 44555 567766542221 222212345999999999863 788888765
|
| >3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.5e-18 Score=187.71 Aligned_cols=145 Identities=21% Similarity=0.296 Sum_probs=112.5
Q ss_pred cceEECCEEEEEEeeCCCCCC---CCCcEEEEEEeCCCcceeec-ccccccCCCCC-----CCcEEeeeEEEecCCcEEE
Q 005279 136 GPVFYKGWYHLFYQYNPNGAI---WGDIVWGHAVSKDLIHWYHL-PLAMVADQWYD-----IMGVWTGSATILPDGKLMM 206 (704)
Q Consensus 136 G~~y~~G~YHLFYQ~nP~~~~---wG~~~WGHAvS~DLvhW~~l-p~AL~Pd~~yD-----~~Gv~SGSavv~~dG~~~~ 206 (704)
++++++|+||||||.++.... ++.++||||+|+|++||++. .++|.|+..++ ..+|++++++..+||+++|
T Consensus 54 sai~~dG~y~lfYtg~~~~~~~~~~~~~~ig~A~S~Dgi~w~~~~~pvl~p~~~~~~~~~~~~~~~DP~v~~~~dg~y~m 133 (356)
T 3taw_A 54 AATIYDGKIVVMYRAEDNSAQGIGSRTSRLGYATSTDGIHFERDTKPAFYPAKDNQAENECPGGTEDPRIAMTEDGTYVL 133 (356)
T ss_dssp EEEEETTEEEEEEEEECSSSCSTTSSCEEECCEEESSSSSCEECSSCSBCCCSSTTHHHHTTTEEEEEEEEECTTSCEEE
T ss_pred EEEEECCEEEEEEEEEcCCCccCCCceeEEEEEEeCCCccceECCcceecCCCccccccccCCceECCEEEEECCCEEEE
Confidence 478899999999999987643 35789999999999999985 46788887644 4799999997655899999
Q ss_pred EEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccC-----CeeEEe----------cCCCeEEE
Q 005279 207 LYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRD-----PTTAWL----------TSEGKWRI 271 (704)
Q Consensus 207 ~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRD-----P~Vvw~----------~~~g~w~M 271 (704)
+||+.... .+.|++|.|+|. .+|++. .+++.+++ ..+||| .. +|. +.+|+|+|
T Consensus 134 ~yt~~~~~-~~~i~la~S~Dl-----~~W~~~--g~i~~~~~---~~~~~~~~~k~~~-l~p~~~~g~p~v~k~~G~y~m 201 (356)
T 3taw_A 134 LYTQWNRK-VPRLAVATSKDL-----KHWTKF--GPAFEKAY---NGKFKDEATKSAS-LVTTLKGDKQVIAKVNGKYFM 201 (356)
T ss_dssp EEEEECSS-CEEEEEEEESSS-----SSCEEE--EETTSSHH---HHTTTTSCCCCEE-EEEEEETTEEEECCBTTBEEE
T ss_pred EEEEeCCC-CceEEEEECCCC-----CCceEe--eeEcCCcc---ccccccccCCccE-EeecccCCCceEEEECCEEEE
Confidence 99997643 478999999984 899997 45654321 123443 22 232 68999999
Q ss_pred EEeeecCCeeEEEEEEeCCCCCcEEe
Q 005279 272 AIGSRINRTGITFVYDTKDFINYELL 297 (704)
Q Consensus 272 v~Gs~~~~~G~~llY~S~Dl~~W~~~ 297 (704)
++| .+.+.+++|+|+.+|+..
T Consensus 202 ~~g-----~~~I~la~S~Dl~~W~~~ 222 (356)
T 3taw_A 202 YWG-----EKNVYAATSDNLIDWDPL 222 (356)
T ss_dssp EEC-----SSSBEEEEESSSSSCEEC
T ss_pred EeC-----CceeeEEECCCcccCeec
Confidence 997 245789999999999974
|
| >3kst_A Endo-1,4-beta-xylanase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.4e-18 Score=179.87 Aligned_cols=180 Identities=14% Similarity=0.129 Sum_probs=135.6
Q ss_pred CccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCCCCcEEeeeEEE-ecCCcEEEEE
Q 005279 130 WMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATI-LPDGKLMMLY 208 (704)
Q Consensus 130 WmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSavv-~~dG~~~~~Y 208 (704)
..-||+. ++++|+||||++..+. +..+|.+++|+||+||+..+.+|.+...++..++|.++++. ..+|+++|+|
T Consensus 23 ~~~DP~i-~~~~g~yyl~~t~~~~----~~~~i~~~~S~DLv~W~~~g~~l~~~~~~~~~~~wAP~v~~~~~~g~~yl~y 97 (306)
T 3kst_A 23 PIADPYV-MFYNNKYYAYGTGGTT----AGEGFACFSSDDLKNWKREGQALSATDSYGTWGFWAPEVYYVESKKKFYLFY 97 (306)
T ss_dssp CCEEEEE-EEETTEEEEEEESCCS----SSSEEEEEEESSSSEEEEEEEEEEGGGSSCSSCCEEEEEEEETTTTEEEEEE
T ss_pred cCCCCEE-EEECCEEEEEEecCCc----CCCCEEEEEeCCccccEECceecCCCCcccccccccCeEEEECCCCEEEEEE
Confidence 4679985 5569999999997653 23579999999999999999999888777888999999853 3599999999
Q ss_pred ecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEe
Q 005279 209 TGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDT 288 (704)
Q Consensus 209 TG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~S 288 (704)
|+. +.+++|++++.. ..|++....|++. ..++||.+++ +++|++||+.++..+..++.+..-+
T Consensus 98 t~~-----~~i~va~s~~p~----Gpw~~~~~~p~~~-------~~~iDp~vf~-D~dG~~Yl~~~~~~~g~~i~~~~ls 160 (306)
T 3kst_A 98 SAE-----EHICVATSTTPE----GPFRQEVKQPIWS-------EKSIDTSLFI-DDDGTPYLYFVRFTDGNVIWVAQMT 160 (306)
T ss_dssp EET-----TEEEEEEESSTT----CCCBCSSCCCSSS-------SCCEEEEEEE-CTTSCEEEEEEEESSSEEEEEEEBC
T ss_pred ECC-----CcEEEEEcCCCC----CCcEeCCCccccC-------CCcccceEEE-eCCCCEEEEEEEeCCCCEEEEEEeC
Confidence 985 358899998753 5798865566653 4679999654 6789999999865444445555558
Q ss_pred CCCCCcEEecce--eccC-----CCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCC
Q 005279 289 KDFINYELLRGV--LHGV-----PNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDD 346 (704)
Q Consensus 289 ~Dl~~W~~~~~l--~~~~-----~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~ 346 (704)
+|+.+|...... .... .+..++|||.+|+.++ +++|.+|....
T Consensus 161 ~d~~~~~~~~~~~~~~~~~~w~~~~~~~~EgP~i~k~~G---------------~YYL~~S~~~~ 210 (306)
T 3kst_A 161 DDLMSIKTETLNQCIKAEVSWELLQGKVAEGPSLLKKNG---------------VYYLIYSANHY 210 (306)
T ss_dssp TTSSCBCGGGCEEEECCCSGGGCSSSSBEEEEEEEEETT---------------EEEEEEEESCT
T ss_pred cccccccCcceeeeccCCccceecCCCceecceEEEECC---------------EEEEEEEeCCC
Confidence 999998754321 1110 1235999999999853 78888887653
|
| >3cu9_A Intracellular arabinanase; glycosyl hydrolase, high resolution, beta-prope geobacillus stearothermophilus, hydrolase; HET: GOL; 1.06A {Geobacillus stearothermophilus} PDB: 3d61_A* 3d60_A 3d5y_A 3d5z_A* 1wl7_A | Back alignment and structure |
|---|
Probab=99.74 E-value=6.1e-17 Score=171.23 Aligned_cols=181 Identities=19% Similarity=0.210 Sum_probs=127.8
Q ss_pred CCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCC--------CCcEEeeeEEEec
Q 005279 129 NWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYD--------IMGVWTGSATILP 200 (704)
Q Consensus 129 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD--------~~Gv~SGSavv~~ 200 (704)
.+++||+. ++++|+||||+++ .+|+|++|+||+||++.+.||.+...++ ..++|+++++. .
T Consensus 22 ~~~~DP~i-~~~~g~yYl~~t~---------~~i~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~~~wAP~v~~-~ 90 (314)
T 3cu9_A 22 LWAHDPVI-AKEGSRWYVFHTG---------SGIQIKTSEDGVHWENMGWVFPSLPDWYKQYVPEKDEDHLWAPDICF-Y 90 (314)
T ss_dssp CBCSSCEE-EEETTEEEEEESE---------ETSEEEEESSSSEEEEEEESCSSCCTTHHHHCTTCCSCEEEEEEEEE-E
T ss_pred cCcCCCEE-EEECCEEEEEECC---------CCeeEEECcCCCCccCCCcccCCcchhhhccCCCcccCceecCcEEE-E
Confidence 46899985 7889999999987 2589999999999999999998765554 47899999975 6
Q ss_pred CCcEEEEEecccCC-ceeeEEEEEeCCCCCCccc--eeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec
Q 005279 201 DGKLMMLYTGSTNE-SVQVQNLAYPADPSDPLLI--KWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI 277 (704)
Q Consensus 201 dG~~~~~YTG~~~~-~~q~q~lA~S~D~~D~~l~--~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~ 277 (704)
+|+++|+||+.... ..+.+++|++++. ||..- +|++. .+++..++. ...++|||.+++ +++|++||++|+..
T Consensus 91 ~g~yylyyt~~~~~~~~~~igva~s~~~-dP~gp~~~w~~~--~~~~~~~~~-~~~~~iDp~vf~-D~dG~~Yl~~g~~~ 165 (314)
T 3cu9_A 91 NGIYYLYYSVSTFGKNTSVIGLATNQTL-DPRDPDYEWKDM--GPVIHSTAS-DNYNAIDPNVVF-DQEGQPWLSFGSFW 165 (314)
T ss_dssp TTEEEEEEEECCTTCCCEEEEEEEESCS-CTTSTTCCCEEE--EEEEEECTT-SSSCCCSCEEEE-CTTSCEEEEECBST
T ss_pred CCEEEEEEEeccCCCCCceEEEEEeCCC-CCCCCCcCcccC--CeEecCCCC-CCCCccCCCeEE-cCCCCEEEEEeccC
Confidence 99999999987532 3577899999762 34322 49985 466654322 234689999654 57899999998742
Q ss_pred CCeeEEEEEE-eCCCCC----cEEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeC
Q 005279 278 NRTGITFVYD-TKDFIN----YELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMD 344 (704)
Q Consensus 278 ~~~G~~llY~-S~Dl~~----W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~ 344 (704)
.| +.+.+ ++|... |+.. .+.....+..++|||.+|+.++ +++|..|..
T Consensus 166 --~~-i~~~~l~~d~~~~~~~~~~~-~~~~~~~~~~~~EgP~i~k~~G---------------~yyL~~s~~ 218 (314)
T 3cu9_A 166 --SG-IQLIQLDTETMKPAAQAELL-TIASRGEEPNAIEAPFIVCRNG---------------YYYLFVSFD 218 (314)
T ss_dssp --TC-EEEEECCTTTCSCCTTCCCE-EEECCSSSSCCEEEEEEEEETT---------------EEEEEEEES
T ss_pred --Cc-EEEEEECcccCcccCCCceE-EecccCCCCCccCccEEEEECC---------------EEEEEEEcC
Confidence 23 44555 344322 3311 1211112335899999999852 788888864
|
| >3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} | Back alignment and structure |
|---|
Probab=99.70 E-value=8.7e-17 Score=176.95 Aligned_cols=174 Identities=17% Similarity=0.187 Sum_probs=130.2
Q ss_pred CCCcccccccccceeecCC--CC----ccCCCcceEECCEEEEEEeeC--CCCCC-CCCcEEEEEEeCCCcceeeccccc
Q 005279 110 WTNNMLSWQRTAFHFQPQK--NW----MNDPNGPVFYKGWYHLFYQYN--PNGAI-WGDIVWGHAVSKDLIHWYHLPLAM 180 (704)
Q Consensus 110 ~~~~~~~w~Rp~~Hf~P~~--gW----mNDPNG~~y~~G~YHLFYQ~n--P~~~~-wG~~~WGHAvS~DLvhW~~lp~AL 180 (704)
.+..+..|++....|.|.. .| +-+|. +++++|+|||||+.+ |.+.. ++.+.|++|+|+|++ |++++..|
T Consensus 143 ~S~Dlv~W~~~g~~l~~~~~~~wd~~gv~aPs-Vi~~dGkYyL~Yt~~~~~~~~~~~~~i~va~A~S~DG~-W~~~~~pl 220 (408)
T 3p2n_A 143 TSEDGWTWKEEGPAVTRGEKGAYDDRSVFTVE-IMKWEDKYYLCYQTVKSPYNVRVKNQVGLAWADSPDGP-WTKSEEPI 220 (408)
T ss_dssp EESSSSEEEEEEEEECCCSTTSTTSSEEEEEE-EEEETTEEEEEEEEECSSCCTTCCCEEEEEEESSTTCC-CEECSSCS
T ss_pred EcCCCCeeeEeCceeCCCCCCCcccCceEeeE-EEEECCEEEEEEEeecCCCCCcCCCceEEEEEECCCCC-EEECCcce
Confidence 3567889999888888764 45 44675 678899999999986 32222 356899999999999 99986544
Q ss_pred -ccC------------------CCCCCCcEEeeeEEEecCCcEEEEEecccC-------CceeeEEEEEeCCCCCCccce
Q 005279 181 -VAD------------------QWYDIMGVWTGSATILPDGKLMMLYTGSTN-------ESVQVQNLAYPADPSDPLLIK 234 (704)
Q Consensus 181 -~Pd------------------~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~-------~~~q~q~lA~S~D~~D~~l~~ 234 (704)
.|. ..||..+++.++++ ..+|+++|+|++... ...+.|++|+|+|.. ..
T Consensus 221 i~~~~~~~~~~e~d~~~~~~~~~~wd~~~v~~P~v~-~~~G~yyl~Ys~~~~g~~~~~~~~~~~igvA~Sdd~~----Gp 295 (408)
T 3p2n_A 221 LSPADNGVWKGEEQDRFAVIKKGDFDSHKVHDPCII-PYKGKFYLYYKGEQMGEAITFGGRQIRHGVAIADNPK----GP 295 (408)
T ss_dssp BCCCSCCEECSSSCCTTCEEECCSTTSSEEEEEEEE-EETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTT----CC
T ss_pred eCCCCCceEEEecCCcccccccceecCCCeEcceEE-EECCEEEEEEEcccCccccccCCCccEEEEEEECCCC----CC
Confidence 332 35677788888875 579999999999853 124789999998852 47
Q ss_pred eEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCcEEecceec
Q 005279 235 WVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLH 302 (704)
Q Consensus 235 W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~S~Dl~~W~~~~~l~~ 302 (704)
|+|+++|||+... .||+ +|.+.+|.|+|+. + +..|...+|+|+|+++|++.+.+..
T Consensus 296 w~k~~~nPVl~~~--------~dp~-Vw~~~dG~y~mi~--~-~g~gh~~i~~S~Dg~~W~~~~~i~~ 351 (408)
T 3p2n_A 296 YVKSPYNPISNSG--------HEIC-VWPYNGGIASLIT--T-DGPEKNTIQWAPDGINFEIKSVIPG 351 (408)
T ss_dssp CEECTTCCSCSSC--------SSCC-EEEETTEEEEEEC--S-SSTTCSEEEEESSSSCCEEEEECSC
T ss_pred cEECCCCCcccCC--------CCCe-eEecCCCEEEEEE--E-CCCCcEEEEECCCCCEEEEEeeccc
Confidence 9999889998632 3799 6866777777773 2 2334344589999999999988754
|
| >1yrz_A Xylan beta-1,4-xylosidase; structural genomics, nysgxrc target T1997, PSI, structure initiative; 2.00A {Bacillus halodurans} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=99.61 E-value=1.3e-14 Score=163.91 Aligned_cols=178 Identities=15% Similarity=0.165 Sum_probs=126.2
Q ss_pred CCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCC------CCcEEeeeEEEecCC
Q 005279 129 NWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYD------IMGVWTGSATILPDG 202 (704)
Q Consensus 129 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD------~~Gv~SGSavv~~dG 202 (704)
||++||+ +++++|.||||++..+. ...|.+++|+||+||+..+.+|.+...++ ..|+|.++++. .+|
T Consensus 12 g~~~DP~-i~~~~~~yY~~~s~~~~-----~~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~wAP~i~~-~~g 84 (528)
T 1yrz_A 12 GFHPDPS-IVRVGDDYYIATSTFEW-----FPGVRIHHSRDLKHWRFVSSPLTRTSQLDMKGNMNSGGIWAPCLSY-HDG 84 (528)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBTE-----ESBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEE-ETT
T ss_pred CCCCCCe-EEEECCEEEEEEccCcc-----CCCeEEEECCCccCceECccccCCcccccccCCCCCCCEECCeEEE-ECC
Confidence 7899998 68899999999986542 13589999999999999999987765433 46899999965 799
Q ss_pred cEEEEEecccC--C--ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEE---Eee
Q 005279 203 KLMMLYTGSTN--E--SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIA---IGS 275 (704)
Q Consensus 203 ~~~~~YTG~~~--~--~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv---~Gs 275 (704)
+++|+||+... . ..+.+++|+++|.. ..|++ |+.. ....+||.+++ +++|++||+ .|+
T Consensus 85 ~~yl~yt~~~~~~g~~~~~~~~va~s~~p~----Gpw~~----p~~~------~~~~iDp~vf~-D~dG~~Yl~~~~~~~ 149 (528)
T 1yrz_A 85 TFYLIYTDVKQWHGAFKDAHNYLVTAQNIE----GPWSD----PIYL------NSSGFDPSLFH-DDDGRKWLVNMIWDY 149 (528)
T ss_dssp EEEEEEEEEEECSSSCCEEEEEEEEESSSS----SCCCC----CEEC------CCSCSCCEEEE-CTTSCEEEEEEEECC
T ss_pred EEEEEEecccCCCCCcccceEEEEEeCCCC----CCccc----cEEC------CCCcCCCceEE-CCCCCEEEEEeeccC
Confidence 99999997532 1 23568899998752 35864 4432 13579999655 578999999 555
Q ss_pred ecC--CeeEEEEEE-eCCCCCcEEecce--eccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCC
Q 005279 276 RIN--RTGITFVYD-TKDFINYELLRGV--LHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDD 345 (704)
Q Consensus 276 ~~~--~~G~~llY~-S~Dl~~W~~~~~l--~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~ 345 (704)
+.. ..+.+.+++ ++|. ++..++. +....+..++|||.+|+.++ +++|..|..+
T Consensus 150 ~~~~~~~~~i~~~~l~~d~--~~~~g~~~~i~~~~~~~~~EgP~i~k~~G---------------~YYL~~s~~g 207 (528)
T 1yrz_A 150 RKGNHPFAGIILQEYSEAE--QKLVGPVKNIYKGTDIQLTEGPHLYKKDG---------------YYYLLVAEGG 207 (528)
T ss_dssp CTTSCSEEEEEEEEEETTT--TEEEEEEEEEECCCTTCCCEEEEEEEETT---------------EEEEEEEESC
T ss_pred CCCCCCCCeEEEEEECCcc--CCCCCCCEEEEcCCCCCccCCCEEEEECC---------------EEEEEEeCCC
Confidence 432 234566666 5564 4444432 11212335899999999863 7888887654
|
| >3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=9.1e-15 Score=158.19 Aligned_cols=122 Identities=17% Similarity=0.248 Sum_probs=97.9
Q ss_pred eeecc---cccccCC------------CCCCCcEEeeeEEEecCCcEEEEEecccCC------ceeeEEEEEeCCCCCCc
Q 005279 173 WYHLP---LAMVADQ------------WYDIMGVWTGSATILPDGKLMMLYTGSTNE------SVQVQNLAYPADPSDPL 231 (704)
Q Consensus 173 W~~lp---~AL~Pd~------------~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~------~~q~q~lA~S~D~~D~~ 231 (704)
|++.+ +.|.|.. .||.+|||+|||+. .||+++|||||+.+. +.+.|++|+|+|+
T Consensus 17 f~R~~~~nPIl~p~~~~~~~~~~~~~~~~D~~gv~sgsai~-~dG~y~lfYtg~~~~~~~~~~~~~~ig~A~S~Dg---- 91 (356)
T 3taw_A 17 FERPTGVNPVIKPLPTKFYCPMREDSVAWEESDTFNPAATI-YDGKIVVMYRAEDNSAQGIGSRTSRLGYATSTDG---- 91 (356)
T ss_dssp CBCCTTTCCSBCCCCCEEEETTTTEEEETTSSEEEEEEEEE-ETTEEEEEEEEECSSSCSTTSSCEEECCEEESSS----
T ss_pred eeeCCCCCCeEccCCccccCcccccCCccccCCeECcEEEE-ECCEEEEEEEEEcCCCccCCCceeEEEEEEeCCC----
Confidence 55443 3677765 68999999999975 799999999998743 4689999999985
Q ss_pred cceeEeeCCCceecCCCCCC-----CcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCcEEecceec
Q 005279 232 LIKWVKYPGNPVLVPPPGIG-----AKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLH 302 (704)
Q Consensus 232 l~~W~K~~~nPVl~~p~g~~-----~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~S~Dl~~W~~~~~l~~ 302 (704)
++|+|.+ +|||.+.+..+ ..++|||+|++ .++|+|+|++.+..+..+.+.+|+|+|+.+|++.+.++.
T Consensus 92 -i~w~~~~-~pvl~p~~~~~~~~~~~~~~~DP~v~~-~~dg~y~m~yt~~~~~~~~i~la~S~Dl~~W~~~g~i~~ 164 (356)
T 3taw_A 92 -IHFERDT-KPAFYPAKDNQAENECPGGTEDPRIAM-TEDGTYVLLYTQWNRKVPRLAVATSKDLKHWTKFGPAFE 164 (356)
T ss_dssp -SSCEECS-SCSBCCCSSTTHHHHTTTEEEEEEEEE-CTTSCEEEEEEEECSSCEEEEEEEESSSSSCEEEEETTS
T ss_pred -ccceECC-cceecCCCccccccccCCceECCEEEE-ECCCEEEEEEEEeCCCCceEEEEECCCCCCceEeeeEcC
Confidence 8999974 89997654422 36899999654 458899999987666678899999999999999888764
|
| >3c7f_A Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta-propeller fold, beta-sandwich, xylan degradati hydrolase; HET: XYP; 1.55A {Bacillus subtilis} PDB: 3c7e_A* 3c7h_A* 3c7o_A* 3c7g_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=3.3e-13 Score=151.28 Aligned_cols=186 Identities=15% Similarity=0.197 Sum_probs=130.3
Q ss_pred CccCCCcceEECCEEEEEEeeCCC-----C-----CCCCCcEEEEEEeCCCcceeecccccccCC----------CCCCC
Q 005279 130 WMNDPNGPVFYKGWYHLFYQYNPN-----G-----AIWGDIVWGHAVSKDLIHWYHLPLAMVADQ----------WYDIM 189 (704)
Q Consensus 130 WmNDPNG~~y~~G~YHLFYQ~nP~-----~-----~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~----------~yD~~ 189 (704)
+..||. +++++|+||||+.+... + .......|.+++|+||+||+.++.++.+.. .| ..
T Consensus 21 ~~~DP~-i~~~~g~yYly~t~~~~~~~~~g~~~~~~~~~~~~i~i~~S~DLv~W~~~g~v~~~~~~~~~~g~~~~~w-~~ 98 (487)
T 3c7f_A 21 LGADPV-ALTYNGRVYIYMSSDDYEYNSNGTIKDNSFANLNRVFVISSADMVNWTDHGAIPVAGANGANGGRGIAKW-AG 98 (487)
T ss_dssp CCEEEE-EEEETTEEEEEEECCCCEECTTSCEECCCSTTCCSEEEEEESSSSSEEEEEEECCBCSTTGGGGTCSBTT-CS
T ss_pred cCCCCC-eEEECCEEEEEEcCCcccccccccccccccccccceEEEECCCCcCcEEccccccCCcccccccccccCc-cc
Confidence 578997 56689999999998642 1 122356799999999999999998877652 22 24
Q ss_pred cEEeeeEEEe-cC--CcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecC-CCCCC-CcCccCCeeEEec
Q 005279 190 GVWTGSATIL-PD--GKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVP-PPGIG-AKDFRDPTTAWLT 264 (704)
Q Consensus 190 Gv~SGSavv~-~d--G~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~-p~g~~-~~~fRDP~Vvw~~ 264 (704)
++|.++++.. .| |+++||||... +.+++|+|+|+. ..|++..+.|++.. .++.. ....+||.+++ +
T Consensus 99 ~~WAP~v~~~~~~g~g~yylyyt~~~----~~i~va~s~~p~----Gpw~~~~g~pli~~~~~g~~~~~~~iDp~vf~-D 169 (487)
T 3c7f_A 99 ASWAPSIAVKKINGKDKFFLYFANSG----GGIGVLTADSPI----GPWTDPIGKPLVTPSTPGMSGVVWLFDPAVFV-D 169 (487)
T ss_dssp CCEEEEEEEEEETTEEEEEEEEESTT----BCEEEEEESSTT----CCCBCSSSSCSBCTTSTTCTTCSSBCCCEEEE-C
T ss_pred cCcchheEEEecCCCCeEEEEEEcCC----cEEEEEEeCCCC----CCcccCCCCeEeecCCCCccCCCCccCCceEE-c
Confidence 7999999753 24 69999999752 568999998753 45987556788763 23321 24579999665 6
Q ss_pred CCCeEEEEEeeecC------------CeeEEEEEEeCCCCCcEEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCC
Q 005279 265 SEGKWRIAIGSRIN------------RTGITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNG 332 (704)
Q Consensus 265 ~~g~w~Mv~Gs~~~------------~~G~~llY~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g 332 (704)
++|++||+.|+... .....+.--++|+..|......+. ...+.|+|.+++.++
T Consensus 170 ddG~~Yl~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~g~~~~i~---~p~~~Egp~i~k~~G------------ 234 (487)
T 3c7f_A 170 DDGTGYLYAGGGVPGVSNPTQGQWANPKTARVIKLGPDMTSVVGSASTID---APFMFEDSGLHKYNG------------ 234 (487)
T ss_dssp TTSCEEEEEECCCSSTTSCCHHHHHCCCCEEEEEECTTSSSEEEEEEEEC---CTTEEEEEEEEEETT------------
T ss_pred CCCCEEEEECCcccCccccccccccCCCceEEEEECCCeeeccCccEEec---CCceEecceEEEECC------------
Confidence 78999999987421 112222235789999986543332 235899999999863
Q ss_pred CCcEEEEEEeeC
Q 005279 333 PGVKHVVKASMD 344 (704)
Q Consensus 333 ~~~k~VL~~s~~ 344 (704)
+++|.+|..
T Consensus 235 ---~YYl~ys~~ 243 (487)
T 3c7f_A 235 ---TYYYSYCIN 243 (487)
T ss_dssp ---EEEEEEEEC
T ss_pred ---EEEEEEECC
Confidence 677776654
|
| >1yif_A Beta-1,4-xylosidase; glycosidase, xylan, structural genomics, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=99.49 E-value=8.2e-13 Score=149.48 Aligned_cols=179 Identities=15% Similarity=0.129 Sum_probs=123.8
Q ss_pred CCCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCC------CCCcEEeeeEEEecC
Q 005279 128 KNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWY------DIMGVWTGSATILPD 201 (704)
Q Consensus 128 ~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~y------D~~Gv~SGSavv~~d 201 (704)
.|++.||+ +++++|.||||++..+.. ..|.++.|+||+||+..+.+|.+...+ +..|+|.++++. .+
T Consensus 9 ~g~~~DP~-ii~~~~~yY~~~s~~~~~-----~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~WAP~i~~-~~ 81 (533)
T 1yif_A 9 KGFNPDPS-ICRAGEDYYIAVSTFEWF-----PGVQIHHSKDLVNWHLVAHPLQRVSQLDMKGNPNSGGVWAPCLSY-SD 81 (533)
T ss_dssp CSSCCSCE-EEEETTEEEEEECCBTEE-----SBCEEEEESSSSSEEEEECSBCSTTTCCCTTCCTTCBBCSCEEEE-ET
T ss_pred CCCCCCCe-EEEECCEEEEEEecCCCC-----CCeEEEEeCCCCCCeECCccccCcccccccCCCCCCCEECceEEE-EC
Confidence 47889998 588899999998865421 348999999999999999888765422 246899999965 79
Q ss_pred CcEEEEEecccC-C---ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec
Q 005279 202 GKLMMLYTGSTN-E---SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI 277 (704)
Q Consensus 202 G~~~~~YTG~~~-~---~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~ 277 (704)
|+++|+||+... . ..+.+++|+++|.. ..|++ |+... ...+||.+++ +++|++||+.+...
T Consensus 82 g~~yl~yt~~~~~~g~~~~~~~~va~s~~p~----Gpw~~----p~~~~------~~~iDp~~f~-D~dG~~Yl~~~~~~ 146 (533)
T 1yif_A 82 GKFWLIYTDVKVVDGAWKDCHNYLVTCETIN----GDWSE----PIKLN------SSGFDASLFH-DTDGKKYLLNMLWD 146 (533)
T ss_dssp TEEEEEEEEECCCSSSCCCEEEEEEEESSTT----SCCCC----CEECC------CSCSCCEEEE-CTTSCEEEEEEEEC
T ss_pred CEEEEEEEeccCCCCCcccccEEEEEeCCCC----CCccc----cEEcC------CCcCCCceEE-CCCCCEEEEEEecc
Confidence 999999997543 1 13578899998752 46874 45432 2468999665 57899999988532
Q ss_pred C-----CeeEEEEEE-eCCCCCcEEecce--eccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCC
Q 005279 278 N-----RTGITFVYD-TKDFINYELLRGV--LHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDD 345 (704)
Q Consensus 278 ~-----~~G~~llY~-S~Dl~~W~~~~~l--~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~ 345 (704)
. ..+.+.+++ ++|+. +..++. +....+..++|||.+|+.++ +++|..|..+
T Consensus 147 ~~~g~~~~~~i~~~~l~~d~~--~~~g~~~~i~~~~~~~~~EgP~i~k~~G---------------~YYL~~s~gg 205 (533)
T 1yif_A 147 HRIDRHSFGGIVIQEYSDKEQ--KLIGKPKVIFEGTDRKLTEAPHLYHIGN---------------YYYLLTAEGG 205 (533)
T ss_dssp CCTTSCSEEEEEEEEEETTTT--EECSCCEEEECCCTTCCCEEEEEEEETT---------------EEEEEEEESC
T ss_pred cccCCCCCCCEEEEEECCccC--CCCCCcEEEEcCCCCCccccceEEEECC---------------EEEEEEeCCC
Confidence 1 123344554 56653 333321 11112335899999999863 7788887654
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.49 E-value=1e-13 Score=150.43 Aligned_cols=125 Identities=14% Similarity=0.183 Sum_probs=99.5
Q ss_pred CcceeecccccccCC-------------CCCCCcEEeeeEEEecCCcEEEEEecccCC------ceeeEEEEEeCCCCCC
Q 005279 170 LIHWYHLPLAMVADQ-------------WYDIMGVWTGSATILPDGKLMMLYTGSTNE------SVQVQNLAYPADPSDP 230 (704)
Q Consensus 170 LvhW~~lp~AL~Pd~-------------~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~------~~q~q~lA~S~D~~D~ 230 (704)
+.+|....++|.|+. +||.++||+|+|+ ..||+++||||++... +.+.|++|+|+|+
T Consensus 19 f~r~~~~~Pil~p~~~~~~~~~~~~~~~~wD~~gvfnp~ai-~~dGky~LfY~~~~~~~~~~~~~~~~ig~A~S~DG--- 94 (364)
T 3qc2_A 19 FERPKNVNPVISPIENTKFYCPLTKDSIAWESNDTFNPAAT-LYNGEIVVLYRAEDKSGVGIGHRTSRLGYATSTDG--- 94 (364)
T ss_dssp CBCCTTTCCSBCCCSSCCEEETTTTEEECTTSSEEEEEEEE-EETTEEEEEEEEECSSSSSTTCSCEEEEEEEESSS---
T ss_pred ceeCCCCCCeEecCCcccccccccccccccccCceECceEE-EECCEEEEEEEEECCCCcccCCCceEEEEEEeCCC---
Confidence 334444345788876 7899999999997 4799999999998653 4688999999995
Q ss_pred ccceeEeeCCCceecCCCCCCC-----cCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCcEEecceec
Q 005279 231 LLIKWVKYPGNPVLVPPPGIGA-----KDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLH 302 (704)
Q Consensus 231 ~l~~W~K~~~nPVl~~p~g~~~-----~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~S~Dl~~W~~~~~l~~ 302 (704)
++|++. .+|||.+.+..+. .++|||+++. .++|+|+|++++.....+.+.+++|+|+++|++.+.++.
T Consensus 95 --i~w~~~-~~Pvl~P~~~~~~~~e~~~gv~DP~v~~-~edG~yym~Yta~~~~~~~i~lA~S~Dl~~W~k~g~i~~ 167 (364)
T 3qc2_A 95 --THFQRE-KTPVFYPDNDSQKELEWPGGCEDPRIAV-TDDGLYVMMYTQWNRHVPRLAVATSRNLKDWTKHGPAFA 167 (364)
T ss_dssp --SSCEEC-SSCSBCCCSSTTHHHHTTTEEEEEEEEE-CTTSCEEEEEEEECSSCEEEEEEEESSSSSCEEEEETTS
T ss_pred --ceeeEc-CcCeEcCCCccccccccCCcEECCEEEE-eCCCEEEEEEEecCCCCeEEEEEEECCCCEEEEeeeccC
Confidence 899996 4799976544332 5789999643 468999999998765667899999999999999887753
|
| >3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=2.6e-12 Score=139.76 Aligned_cols=175 Identities=15% Similarity=0.166 Sum_probs=120.8
Q ss_pred CCcccccccccceeecCC--CCc----cCCCcceEECCEEEEEEeeCCCCC-CCCCcEEEEEEeCCC-cceeeccc-ccc
Q 005279 111 TNNMLSWQRTAFHFQPQK--NWM----NDPNGPVFYKGWYHLFYQYNPNGA-IWGDIVWGHAVSKDL-IHWYHLPL-AMV 181 (704)
Q Consensus 111 ~~~~~~w~Rp~~Hf~P~~--gWm----NDPNG~~y~~G~YHLFYQ~nP~~~-~wG~~~WGHAvS~DL-vhW~~lp~-AL~ 181 (704)
+..+..|.+...-+.|.. .|- -.|. +++++|+|||||..+.... ..+....|+|+|+|+ .+|+..+. .|.
T Consensus 99 S~DLv~W~~~g~~l~~~~~~~~d~~gvwaPs-vi~~dGkyyL~Yt~~~~~~~~~~~~~igvA~Sdd~~Gpw~~~~~Pvi~ 177 (374)
T 3r4z_A 99 SKDKITWKEIGPAIQRGAAGAYDDRAVFTPE-VLRHNGTYYLVYQTVKAPYLNRSLEHIAIAYSDSPFGPWTKSDAPILS 177 (374)
T ss_dssp ESSSSEEEEEEEEECCCCTTSTTSSEEEEEE-EEEETTEEEEEEEEECSSCCTTCCBEEEEEEESSTTCCCEECSSCSBC
T ss_pred CCCCcCcEeCcccCCCCCCCCccCCCEECCE-EEEECCEEEEEEEeccCCCCCCCcceEEEEEECCCCCCeEECCCCEeC
Confidence 445778987776666643 343 2354 5678999999999765432 123578999999997 68998643 333
Q ss_pred cC------------------CCCCCCcEEeeeEEEecCCcEEEEEecccCC-------ceeeEEEEEeCCCCCCccceeE
Q 005279 182 AD------------------QWYDIMGVWTGSATILPDGKLMMLYTGSTNE-------SVQVQNLAYPADPSDPLLIKWV 236 (704)
Q Consensus 182 Pd------------------~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~-------~~q~q~lA~S~D~~D~~l~~W~ 236 (704)
|. ..++..+++.++++ ..+|+++|+|++.... +.+.|++|+|++.. ..|+
T Consensus 178 ~~~~~~w~~ddd~~~~~~~~~~~d~~~~~~P~v~-~~~g~yyl~Y~~~~~~~~~~~~~~~~~igvA~sds~~----Gpw~ 252 (374)
T 3r4z_A 178 PENDGVWDTDEDNRFLVKEKGSFDSHKVHDPCLM-FFNNRFYLYYKGETMGESMNMGGREIKHGVAIADSPL----GPYT 252 (374)
T ss_dssp CCCCSEECSSSSCTTCEEECCSTTSSEEEEEEEE-EETTEEEEEEEEECTTCCEETTEECEEEEEEEESSTT----CCCE
T ss_pred CCcCCceeecCCceEEEecCCccccCccccceEE-EECCEEEEEEEecCCCCccccCCCcceEEEEEECCCC----CCCE
Confidence 32 12455668888775 5799999999998532 13689999998752 4699
Q ss_pred eeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCcEEecceecc
Q 005279 237 KYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLHG 303 (704)
Q Consensus 237 K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~S~Dl~~W~~~~~l~~~ 303 (704)
|.+.+||+.. .+||+ +|.. ++.|+++++....+.+ .++.|+|+++|++.+.+...
T Consensus 253 ~~~~~Pi~~~--------~~dp~-V~~~-~~g~~~mv~~~g~~~~--~l~~S~Dg~~W~~~~~i~~~ 307 (374)
T 3r4z_A 253 KSEYNPITNS--------GHEVA-VWPY-KGGMATMLTTDGPEKN--TCQWAEDGINFDIMSHIKGA 307 (374)
T ss_dssp ECTTCCCCSS--------CSSCC-EEEE-TTEEEEEECSSSTTCS--EEEEETTSSSCEEEEECSCC
T ss_pred ECCCCCEeCC--------CCCCc-eEEe-CCEEEEEEEecCCCce--EEEECCCcCCeEEcceeccC
Confidence 9988999852 25999 5754 4556555553333334 45669999999999888654
|
| >2exh_A Beta-D-xylosidase; glykosidase, hydrolsase, family43, hydrolase; HET: MES; 1.88A {Geobacillus stearothermophilus} SCOP: b.29.1.23 b.67.2.1 PDB: 2exi_A* 2exj_A* 2exk_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=2.1e-12 Score=146.27 Aligned_cols=178 Identities=15% Similarity=0.094 Sum_probs=124.9
Q ss_pred CCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCC------CCCcEEeeeEEEecCC
Q 005279 129 NWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWY------DIMGVWTGSATILPDG 202 (704)
Q Consensus 129 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~y------D~~Gv~SGSavv~~dG 202 (704)
||+.||+ +++++|.||||++.... ...|.++.|+||+||+..+.+|.+...+ +..|+|.++++. .+|
T Consensus 11 g~~~DP~-i~~~~~~yY~~~s~~~~-----~~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~WAP~i~~-~~g 83 (535)
T 2exh_A 11 GFHPDPS-ICRVGDDYYIAVSTFEW-----FPGVRIYHSKDLKNWRLVARPLNRLSQLNMIGNPDSGGVWAPHLSY-SDG 83 (535)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBTE-----ESBCEEEEESSSSSCEEEECCBCSTTTCCCTTCCTTCBBCSCEEEE-ETT
T ss_pred CCCCCCE-EEEECCEEEEEECCCCC-----CCCeEEEECCCCCCcEECccccCCcccccccCCCCCCCEECCeEEE-ECC
Confidence 7899998 58889999999886431 2458999999999999999988765422 347899999965 799
Q ss_pred cEEEEEecccCC----ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecC
Q 005279 203 KLMMLYTGSTNE----SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRIN 278 (704)
Q Consensus 203 ~~~~~YTG~~~~----~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~ 278 (704)
+++|+||+.... ..+.+++|+++|.. ..|++ |+... ...+||.+++ +++|++||+.+....
T Consensus 84 ~~ylyyt~~~~~~g~~~~~~~~va~s~~~~----Gpw~~----p~~~~------~~~iDp~vf~-DddG~~Yl~~~~~~~ 148 (535)
T 2exh_A 84 KFWLIYTDVKVVEGQWKDGHNYLVTCDTID----GAWSD----PIYLN------SSGFDPSLFH-DEDGRKYLVNMYWDH 148 (535)
T ss_dssp EEEEEEEEECCCSSSCCCEEEEEEEESSTT----SCCCC----CEECC------CSCSCCEEEE-CTTSCEEEEEEEECC
T ss_pred EEEEEEEeccCCCCCccccceEEEEeCCCC----CCccc----cEecC------CCcCCCceEE-CCCCCEEEEEEecCC
Confidence 999999976431 23668899998753 45875 44321 2468999665 578999999885321
Q ss_pred -----CeeEEEEEE-eCCCCCcEEecce--eccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCC
Q 005279 279 -----RTGITFVYD-TKDFINYELLRGV--LHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDD 345 (704)
Q Consensus 279 -----~~G~~llY~-S~Dl~~W~~~~~l--~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~ 345 (704)
..+.+.+++ +.|+ |+..++. +......+++|||.+|+.++ +++|..|..+
T Consensus 149 ~~~~~~~~~i~~~~l~~d~--~~~~g~~~~i~~~~~~~~~EgP~i~k~~G---------------~YYL~~s~gg 206 (535)
T 2exh_A 149 RVDHHPFYGIVLQEYSVEQ--KKLVGEPKIIFKGTDLRITEGPHLYKING---------------YYYLLTAEGG 206 (535)
T ss_dssp CTTSCSEEEEEEEEEETTT--TEEEEEEEEEECCCTTCCCEEEEEEEETT---------------EEEEEEEESC
T ss_pred ccCCCCCCcEEEEEECCcc--CCCCCCcEEEEcCCCCCccccceEEEECC---------------EEEEEEeCCC
Confidence 123455555 5564 5554432 11212335899999999863 7888887654
|
| >1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 | Back alignment and structure |
|---|
Probab=99.45 E-value=1.6e-13 Score=147.20 Aligned_cols=121 Identities=14% Similarity=0.139 Sum_probs=100.7
Q ss_pred CCcceeecccccccCC-CCCCCcEEeeeEEEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCC
Q 005279 169 DLIHWYHLPLAMVADQ-WYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPP 247 (704)
Q Consensus 169 DLvhW~~lp~AL~Pd~-~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p 247 (704)
.+++|++.| +|.|+. +| ..|||+|+++. .||+++|||++....+.+.|++|+|+|+ ++|++.+ +|||.+.
T Consensus 35 ~~~r~~~~P-iL~p~~~~~-~~gv~n~~~i~-~~g~~~lfY~~~~~~~~~~~~~A~S~Dg-----i~w~~~~-~pvl~p~ 105 (338)
T 1vkd_A 35 PVWRYSKNP-IIGRNPVPK-GARVFNSAVVP-YNGEFVGVFRIDHKNTRPFLHFGRSKDG-----INWEIEP-EEIQWVD 105 (338)
T ss_dssp SEEECTTCC-SBCBSCSTT-EEEEEEEEEEE-ETTEEEEEEEEEETTSCEEEEEEEESSS-----SSCEECS-SCCCEEC
T ss_pred ceEECCCCc-eECCCCCcc-cCeEEccEEEE-ECCEEEEEEEEECCCCcEEEEEEEeCCC-----CccEECC-CCEEeCC
Confidence 578898888 788985 77 79999999975 5999999999987666789999999985 7999974 7888754
Q ss_pred --CCCCCcCcc-CCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCcEEeccee
Q 005279 248 --PGIGAKDFR-DPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVL 301 (704)
Q Consensus 248 --~g~~~~~fR-DP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~S~Dl~~W~~~~~l~ 301 (704)
...+..++| ||+|+. .+++|+|++++ ....+.+.+++|+|+.+|++.+.+.
T Consensus 106 ~~~~~~~~g~~yDP~v~~--~~d~yym~yt~-~~~~~~i~la~S~Dl~~W~~~~~i~ 159 (338)
T 1vkd_A 106 VNGEPFQPSYAYDPRVVK--IEDTYYITFCT-DDHGPTIGVGMTKDFKTFVRLPNAY 159 (338)
T ss_dssp TTSCBCCCSSEEEEEEEE--ETTEEEEEEEE-ESSSEEEEEEEESSSSSEEEECCSS
T ss_pred CCCccccCCEEeCcEEEE--ECCEEEEEEEE-cCCcceEEEEEECCCCeEEECCccC
Confidence 334567899 999643 46899999998 6566789999999999999988764
|
| >3nqh_A Glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.11A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.44 E-value=1.8e-12 Score=143.38 Aligned_cols=175 Identities=14% Similarity=0.036 Sum_probs=126.5
Q ss_pred CCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCC--CCC-CcEEeeeEEEe-cCCcEEEEE
Q 005279 133 DPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQW--YDI-MGVWTGSATIL-PDGKLMMLY 208 (704)
Q Consensus 133 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~--yD~-~Gv~SGSavv~-~dG~~~~~Y 208 (704)
|| ++++++|+||||.++.+.+.. ....|.+++|+||+||+..+.+|.+... +.. .++|..+++.. .+|+++|+|
T Consensus 26 DP-sIi~~~g~YYly~T~~~~~~~-~~~gi~v~sS~DLvnW~~~G~aL~~~~~~~~~~~~~~WAP~V~y~~~dGkYYLyy 103 (441)
T 3nqh_A 26 GA-CIVEENGRYYLFGEYKSDKSN-AFPGFSCYSSDDLVNWKFERVVLPMQSSGILGPDRVGERVKVMKCPSTGEYVMYM 103 (441)
T ss_dssp EE-EEEEETTEEEEEEECCCSSCS-SCCCEEEEEESSSSSCEEEEEEECCCSSSTTSTTEEEEEEEEEECTTTCCEEEEE
T ss_pred CC-EEEEECCEEEEEEEcCCccCC-CCCCeeEEECCCCCCcEECceeeccCCccccCCCCccCCceeEEEccCCEEEEEE
Confidence 88 589999999999998775433 3578999999999999999999876542 322 35899998653 599999999
Q ss_pred ecccCC-ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEE
Q 005279 209 TGSTNE-SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYD 287 (704)
Q Consensus 209 TG~~~~-~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~ 287 (704)
|+.... ..+.+++|++++.. ..|+.. .|++.... ....+||.+++ ++||++||+.|+. .+ ++
T Consensus 104 t~~~~~~~~~~igVAtSdsP~----GPwt~~--gpl~~~g~---~~~~IDPsvF~-DdDGk~YL~~g~~-----~I--~e 166 (441)
T 3nqh_A 104 HADDMNYKDPHIGYATCSTIA----GEYKLH--GPLLYEGK---PIRRWDMGTYQ-DTDGTGYLLLHGG-----IV--YR 166 (441)
T ss_dssp EEEETTSCSCEEEEEEESSTT----SCCEEE--EECEETTE---ECCCCSEEEEE-CTTSCEEEEEGGG-----EE--EE
T ss_pred EeCCCCCCcceEEEEEeCCCC----CCceEc--ceeecCCC---cccccCceEEE-eCCCCEEEEeCCC-----cE--EE
Confidence 987532 24678999998753 468863 57764311 12468999655 6789999999852 22 33
Q ss_pred -eCCCCCcEEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeC
Q 005279 288 -TKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMD 344 (704)
Q Consensus 288 -S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~ 344 (704)
++|+.++.-....+ ......|||.+|+.++ +++|..|..
T Consensus 167 Ls~D~~~~~g~~~~i---~~g~~~EgP~i~K~~G---------------~YYL~~S~~ 206 (441)
T 3nqh_A 167 LSKDYRTAEEKVVSG---VGGSHGESPAMFKKDG---------------TYFFLFSNL 206 (441)
T ss_dssp ECTTSSSEEEEEESC---STTCCCEEEEEEEETT---------------EEEEEEECS
T ss_pred eCCccccccCceEEe---CCCCceECcEEEEECC---------------EEEEEEeCC
Confidence 78888876422211 1224789999999853 788888864
|
| >4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A | Back alignment and structure |
|---|
Probab=99.40 E-value=3.5e-12 Score=140.21 Aligned_cols=175 Identities=19% Similarity=0.244 Sum_probs=121.8
Q ss_pred CCcccccccccceeecC--CCC----ccCCCcceEECCEEEEEEeeCCCCC-CCCCcEEEEEEeCC-Ccceeeccc-ccc
Q 005279 111 TNNMLSWQRTAFHFQPQ--KNW----MNDPNGPVFYKGWYHLFYQYNPNGA-IWGDIVWGHAVSKD-LIHWYHLPL-AMV 181 (704)
Q Consensus 111 ~~~~~~w~Rp~~Hf~P~--~gW----mNDPNG~~y~~G~YHLFYQ~nP~~~-~wG~~~WGHAvS~D-LvhW~~lp~-AL~ 181 (704)
+..+..|.+...=+.|. ..| +-+|. +++++|+|+|||..+.... ..+....|.|+|+| .-.|+..+. .|.
T Consensus 139 S~Dlv~W~~~g~~L~~~~~~~wd~~gv~aP~-Vi~~~Gkyym~Yt~~~~~~~~~~~~~IgvA~Sdsp~Gpwt~~~~Pvl~ 217 (404)
T 4ak5_A 139 SKDGLTWKEQGIAVKRGEKGAYDDRSVFTPE-VMEWKGKYYLCYQAVKSPYTVRVKNTIGMACADSPEGLWTKTDKPVLE 217 (404)
T ss_dssp ESSSSEEEEEEEEECCCSTTSTTSSEEEEEE-EEEETTEEEEEEEEECSCCCTTCCCEEEEEEESSTTCCCEECSSCSBC
T ss_pred CCCCCCceeCceEeecCCCCccccCCEEeeE-EEEECCEEEEEEEeccCCCCCCCcceEEEEEEeCCCCCceECCCceec
Confidence 44577898776655553 244 34564 5778999999998654321 12456789999986 348998753 333
Q ss_pred cC------------------CCCCCCcEEeeeEEEecCCcEEEEEecccCC-------ceeeEEEEEeCCCCCCccceeE
Q 005279 182 AD------------------QWYDIMGVWTGSATILPDGKLMMLYTGSTNE-------SVQVQNLAYPADPSDPLLIKWV 236 (704)
Q Consensus 182 Pd------------------~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~-------~~q~q~lA~S~D~~D~~l~~W~ 236 (704)
|. ..||..+++.++++ ..+|+++|||+|+... +.+.|++|+|+|. +..|+
T Consensus 218 ~~~~~~W~~ddd~~~~~~~~~~wD~~~~~~P~v~-~~~g~yyl~Ysg~~~~~~~~~~~~~~~igvA~Sdd~----~Gpw~ 292 (404)
T 4ak5_A 218 PSDTGEWEGDEDNRFKVVSKGDFDSHKVHDPCII-PYNGKFYMYYKGERMGEEITWGGREIKHGVAIAENP----MGPYV 292 (404)
T ss_dssp CCSCCEECSSSSCTTCEEECCSTTSSEEEEEEEE-EETTEEEEEEEEECTTCCEETTEECCEEEEEEESST----TCCCE
T ss_pred CCCCcceeeccCceeeeccCCcccCCcEECCEEE-EECCEEEEEEECCCCCCccccCCCcceEEEEEECCC----CCCcE
Confidence 32 23567788999875 5899999999998532 1468999999875 24799
Q ss_pred eeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCcEEecceecc
Q 005279 237 KYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLHG 303 (704)
Q Consensus 237 K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~S~Dl~~W~~~~~l~~~ 303 (704)
|++.|||+.. + .+++ +|.+.+|.|+|+... ..+.| +++.|+|+++|++.+.+.+.
T Consensus 293 k~~~nPv~~~--~------~e~~-Vw~~~dg~~~ll~~~-g~~~g--~l~~S~Dg~~W~~~~~l~~~ 347 (404)
T 4ak5_A 293 KSEYNPISNS--G------HEVC-VWPYKGGIASLITTD-GPEKN--TLQWSPDGINFEIMSVVKGA 347 (404)
T ss_dssp ECTTCCSCSS--C------SSCC-EEEETTEEEEEECSS-STTCS--EEEEESSSSCCEEEEECSCC
T ss_pred ECCCCceecC--C------Ccce-EEEeCCcEEEEEEec-CCCce--EEEECCCCCeEEEeeeeccC
Confidence 9988999852 1 2566 787655555666432 23445 46669999999999988764
|
| >3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=1.3e-10 Score=131.52 Aligned_cols=186 Identities=15% Similarity=0.095 Sum_probs=124.2
Q ss_pred ccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCC--CCCCCcEEeeeEEEe-cCCcEEEE
Q 005279 131 MNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQ--WYDIMGVWTGSATIL-PDGKLMML 207 (704)
Q Consensus 131 mNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~--~yD~~Gv~SGSavv~-~dG~~~~~ 207 (704)
.-||. +++++|+||||..+.... .+...+..++|+||+||+..+.+|.+.. .++..++|.+.++.. .+|+++||
T Consensus 58 a~DP~-Ii~~~g~YY~~~T~~~~~--~~~~gi~v~~S~DLv~W~~~g~~l~~~~~~~~~~~~~WAP~v~~~~~~Gkyymy 134 (526)
T 3vsf_A 58 AHGGG-MLKHGDYYYWYGEYRDDS--NLFLGVSCYRSKDLVNWEYRGEVLSRNSAPELNHCNIERPKVMYNASTGEFVMW 134 (526)
T ss_dssp CEEEE-EEEETTEEEEEEEEECTT--SSEEEEEEEEESSSSSCEEEEEEEETTSSGGGSSCEEEEEEEEECTTTCCEEEE
T ss_pred ccCCe-EEEECCEEEEEEecCCCC--CCcCcEEEEECCCCCCcCCCCccCCCCCCcCcccCceECCEEEEECCCCEEEEE
Confidence 34995 788999999999875322 2236789999999999999999887654 345567999999754 38999999
Q ss_pred Eeccc--CCceeeEEEEEeCCCCCCccceeEeeCC-CceecC---CCCCCCcCccCCeeEEecCCCeEEEEEeeecCCee
Q 005279 208 YTGST--NESVQVQNLAYPADPSDPLLIKWVKYPG-NPVLVP---PPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTG 281 (704)
Q Consensus 208 YTG~~--~~~~q~q~lA~S~D~~D~~l~~W~K~~~-nPVl~~---p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G 281 (704)
|+... ....+.+++|++++.. ..|+.... .|+... +.+......+||.+++ +++|++||++++..+ .+
T Consensus 135 ~~~~~~~~~~~~~igvats~~p~----Gpw~~~g~~~p~~~~g~~~~~~~~~~~iDp~vf~-D~dG~~Yl~~~~~~~-~~ 208 (526)
T 3vsf_A 135 MHWENGINYGQARAAVAYSKTPD----GKFTYIRSFRPMQDTGVMDHGLPGYMSRDCNVFV-DTDGKGYFISAANEN-MD 208 (526)
T ss_dssp EEEECSSCSCCCEEEEEEESSSS----SCCEEEEEECSSCTTCCEETTEESCCCCSEEEEE-CTTSCEEEEEEETTT-TE
T ss_pred EEeeCCCCCCcceEEEEEcCCCC----CCCEeccccccccccccccCCCCCcccccccEEE-CCCCCEEEEEEecCC-Cc
Confidence 99652 1124678999998853 46775321 233211 0111114569999655 679999999987533 24
Q ss_pred EEEEEEeCCCCCcEEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEee
Q 005279 282 ITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASM 343 (704)
Q Consensus 282 ~~llY~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~ 343 (704)
+.+.--++|+..+.-...... ++ ...|+|.+|+.++ +++|.+|.
T Consensus 209 i~i~~l~~d~~~~~~~~~~~~--~g-~~~EgP~i~k~~G---------------~YYL~~S~ 252 (526)
T 3vsf_A 209 LHLYELTPDYKNIASLKAKLF--VG-QQREAPCLIKRNG---------------YYYLITSG 252 (526)
T ss_dssp EEEEEECTTSSSEEEEEEEES--TT-SCCEEEEEEESSS---------------CEEEEEEC
T ss_pred eEEEEcCCCcccccCceEEeC--CC-CCcCCeEEEEECC---------------EEEEEEcC
Confidence 333334577776554222111 11 3679999999752 67888873
|
| >3c2u_A Xylosidase/arabinosidase; tetramer, glycoside hydrolase, GH43, alpha-L- arabinofuranosidase; HET: B3P; 1.30A {Selenomonas ruminantium} PDB: 1y7b_A* 1yi7_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=1.3e-09 Score=123.43 Aligned_cols=178 Identities=17% Similarity=0.168 Sum_probs=119.5
Q ss_pred CCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCC------CCCCcEEeeeEEEecCC
Q 005279 129 NWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQW------YDIMGVWTGSATILPDG 202 (704)
Q Consensus 129 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~------yD~~Gv~SGSavv~~dG 202 (704)
++.-||. +++++|.|+||..... | ...+..+.|+||+||+..+.+|.+... .+..++|.++++. .+|
T Consensus 10 ~~~~DP~-i~~~~~~yY~~~s~~~----~-~~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~WAP~i~~-~~g 82 (538)
T 3c2u_A 10 GFNPDPS-IVRAGDDYYIATSTFE----W-FPGVQIHHSKDLVHWHLVAHPLSTTEFLDMKGNPDSGGIWAPDLSY-ADG 82 (538)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBT----E-ESBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEE-ETT
T ss_pred CCCCCCE-EEEECCEEEEEEccCC----C-CCCeEEEECCCCCCcEECccccCCcccccccCCCCCCCEECCeEEE-ECC
Confidence 7889997 6888999999875321 1 134788999999999999988865431 1346899999864 799
Q ss_pred cEEEEEecccC-C---ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecC
Q 005279 203 KLMMLYTGSTN-E---SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRIN 278 (704)
Q Consensus 203 ~~~~~YTG~~~-~---~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~ 278 (704)
+++|+||.... . ..+.+++|+++|.. ..|++ |+... ...+||.+++ +++|++||+.+....
T Consensus 83 ~~yly~t~~~~~~g~~~~~~~~va~s~~p~----Gpw~~----p~~~~------~~~iDp~~f~-DddG~~Yl~~~~~~~ 147 (538)
T 3c2u_A 83 KFWLIYTDVKVVDGMWKDCHNYLTTAEDIK----GPWSK----PILLN------GAGFDASLFH-DPSGKKYLVNMYWDQ 147 (538)
T ss_dssp EEEEEEEEECCCSSSCCCEEEEEEEESSTT----CCCCC----CEEEE------CSCSCCEEEE-CTTSCEEEEEEEECC
T ss_pred EEEEEEEeccCCCCCcccccEEEEEECCCC----CCccc----cEecC------CCcCCCeeEE-CCCCCEEEEEEecCC
Confidence 99999997542 1 13567899998753 35864 44321 1358999765 568999999875321
Q ss_pred -----CeeEEEEEE-eCCCCCcEEecce--eccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCC
Q 005279 279 -----RTGITFVYD-TKDFINYELLRGV--LHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDD 345 (704)
Q Consensus 279 -----~~G~~llY~-S~Dl~~W~~~~~l--~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~ 345 (704)
..+.+.+.+ +.|. |+..++. +....+....|+|.+|+.++ +++|..|...
T Consensus 148 ~~~~~~~~~i~~~~l~~d~--~~~~g~~~~i~~~~~~~~~EgP~i~k~~G---------------~YYL~~s~gg 205 (538)
T 3c2u_A 148 RVYHHNFYGIALQEYSVAE--EKLIGKPEIIYKGTDIAYTEGPHLYYIND---------------MYYLMTAEGG 205 (538)
T ss_dssp CTTSCSEEEEEEEEEETTT--TEECSCCEEEECCCTTCCCEEEEEEEETT---------------EEEEEEEESC
T ss_pred ccCCCCCCCEEEEEECCcc--CCCCCCCEEEecCCCCCccccceEEEECC---------------EEEEEEecCC
Confidence 123344444 4554 4554432 11112234799999999853 7888887654
|
| >2x8s_A Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; 1.50A {Bacillus subtilis} PDB: 2x8f_A 2x8t_A 3lv4_A | Back alignment and structure |
|---|
Probab=98.93 E-value=1.8e-08 Score=112.67 Aligned_cols=180 Identities=20% Similarity=0.247 Sum_probs=111.2
Q ss_pred ccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCC--------------CC-CCCcEEeee
Q 005279 131 MNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQ--------------WY-DIMGVWTGS 195 (704)
Q Consensus 131 mNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~--------------~y-D~~Gv~SGS 195 (704)
.-||. +++++|.|+||.-+ ...+.|+||+||+..+.+|.+.. .| ...++|.++
T Consensus 36 ~~DPs-ii~~~g~YYl~~T~-----------~~i~~S~DLvnW~~~g~~l~~~~~~~~~~~~~l~~~~~w~~~~~~WAP~ 103 (470)
T 2x8s_A 36 VHDPS-IIETNGTFYVFGSH-----------LASAKSNDLMQWQQLTTSVSNDNPLIPNVYEELKETFEWAQSDTLWAAD 103 (470)
T ss_dssp CSSCE-EEEETTEEEEECST-----------TCEEEESSSSBCEEEECSCSTTCTTSTTHHHHTHHHHHHHTCSSCCCCE
T ss_pred CCCCE-EEEECCEEEEEECc-----------CceEECCCcccceeccccccccccccccccccccccccccCCCceECCe
Confidence 45996 67789999998532 13589999999999987764321 11 236899999
Q ss_pred EEEecCCcEEEEEecccCC-ceeeEEEEEeCCCCCCccceeEeeCCCceecCC-----CC--C---CCcCccCCeeEEec
Q 005279 196 ATILPDGKLMMLYTGSTNE-SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPP-----PG--I---GAKDFRDPTTAWLT 264 (704)
Q Consensus 196 avv~~dG~~~~~YTG~~~~-~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p-----~g--~---~~~~fRDP~Vvw~~ 264 (704)
++...||+++|||+..... ..+.+++|+|+|.. ..|+.. +.++.... .+ + .....+||.+++ +
T Consensus 104 vi~~~dGkyylyys~~~~~~~~~~IgvatSddp~----GPw~~~-g~~l~~~~~~~~~dg~~~~~~~~~~~IDp~vf~-D 177 (470)
T 2x8s_A 104 VTQLADGKYYMYYNACRGDSPRSAMGVAVADNIE----GPYKNK-GIFLKSGMEGTSSDGTPYDATKHPNVVAPHTFF-D 177 (470)
T ss_dssp EEECTTSCEEEEEEEECSSSCCEEEEEEEESSTT----CCCEEE-EEEEEECCSSBCTTSSBCCTTTSCCSCCCEEEE-C
T ss_pred EEEecCCEEEEEEEeccCCCCccEEEEEEeCCCC----CCceeC-CeeeccCcccccccccccccccCCCCCCCCEEE-c
Confidence 8654689999999986432 34678899998752 469875 23443310 01 1 123568999665 5
Q ss_pred CCCeEEEEEeeecCCeeEEEEEEe-CCC---CCcEEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEE
Q 005279 265 SEGKWRIAIGSRINRTGITFVYDT-KDF---INYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVK 340 (704)
Q Consensus 265 ~~g~w~Mv~Gs~~~~~G~~llY~S-~Dl---~~W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~ 340 (704)
++|++||+.|+.. .| +.+.+. +|. ..+...+..+.. ......|+|-+|.-... .+++|.
T Consensus 178 dDG~~Yl~~g~~~--~g-I~~~eL~~d~~~~~~~~~~~~~i~~-g~~~~~EGP~i~~~K~~-------------G~YYL~ 240 (470)
T 2x8s_A 178 KDGKLWMVYGSYS--GG-IFILEMNPKTGFPLPGQGYGKKLLG-GNHSRIEGPYVLYNPDT-------------QYYYLY 240 (470)
T ss_dssp TTSCEEEEECBST--TC-EEEEEBCTTTSSBCTTCTTCEEEEC-CSSCSEEEEEEEEETTT-------------TEEEEE
T ss_pred CCCCEEEEeeecC--Cc-EEEEEECCccCcCcCCcccceEecC-CCCCceeccEEEEEccC-------------CEEEEE
Confidence 7899999998642 23 333443 332 111100111111 11236899999853211 278888
Q ss_pred EeeCC
Q 005279 341 ASMDD 345 (704)
Q Consensus 341 ~s~~~ 345 (704)
.|...
T Consensus 241 ~S~g~ 245 (470)
T 2x8s_A 241 LSYGG 245 (470)
T ss_dssp EEESB
T ss_pred EEeCC
Confidence 88654
|
| >3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A* | Back alignment and structure |
|---|
Probab=98.59 E-value=6.9e-07 Score=99.71 Aligned_cols=178 Identities=15% Similarity=0.120 Sum_probs=112.4
Q ss_pred cCCCcceE-ECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccc--cCC-CCCCCcEEeeeEEEecCCcEEEE
Q 005279 132 NDPNGPVF-YKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMV--ADQ-WYDIMGVWTGSATILPDGKLMML 207 (704)
Q Consensus 132 NDPNG~~y-~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~--Pd~-~yD~~Gv~SGSavv~~dG~~~~~ 207 (704)
-||. +++ .+|+|+||+-... ...+..+.|+||+||+..+.++. +.. .....++|...++. .||+++|+
T Consensus 20 ~DP~-iir~~dg~YY~~~T~~~------~~~i~i~~S~DLv~W~~~~~~~~w~~~~~~~~~~~~WAP~v~~-~~Gkyyly 91 (468)
T 3akh_A 20 ADPH-IFKHTDGYYYFTATVPE------YDRIVLRRATTLQGLATAPETTIWTKHASGVMGAHIWAPEIHF-IDGKWYVY 91 (468)
T ss_dssp EEEE-EEECTTSCEEEEEECTT------CCEEEEEEESSTGGGGGCCCEEEEECCSSSTTCEEEEEEEEEE-ETTEEEEE
T ss_pred CCCE-EEEecCCEEEEEEEeCC------CCCEEEEECCCccccccCCCcceecCCCCCCCCCCEecceEEE-ECCEEEEE
Confidence 7996 566 5899999987521 24688999999999998765432 211 12346899999864 69999999
Q ss_pred EecccCCc--eeeEEEEE--eCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec---CCe
Q 005279 208 YTGSTNES--VQVQNLAY--PADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI---NRT 280 (704)
Q Consensus 208 YTG~~~~~--~q~q~lA~--S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~---~~~ 280 (704)
|+...... ...+++|+ +.| |.-..|+.. ..++.+ .+ ....||.+++ .+|++||+.++.. +..
T Consensus 92 ys~~~~~~~~~~~i~va~~~s~d---p~~Gpw~~~--g~~~~~-~~---~~~IDp~vf~--ddG~~Yl~~g~~~~~~~~~ 160 (468)
T 3akh_A 92 FAAGSTSDVWAIRMYVLESGAAN---PLTGSWTEK--GQIATP-VS---SFSLDATTFV--VNGVRHLAWAQRNPAEDNN 160 (468)
T ss_dssp EEEECSSCTTCCEEEEEEECCSC---TTTSCCEEE--EECCCS-SC---SCEEEEEEEE--ETTEEEEEEEECCTTSSSS
T ss_pred EEeECCCCCCceeEEEEEccCCC---CCCCCCccc--ceeecC-CC---CCcCcCeEEE--ECCEEEEEEEccCCCCCCC
Confidence 99875321 34567776 444 322579874 233322 11 2357999654 6899999998653 112
Q ss_pred eEEEEEEeCCCCCcEEecceec-cCC-------CCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCC
Q 005279 281 GITFVYDTKDFINYELLRGVLH-GVP-------NTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDD 345 (704)
Q Consensus 281 G~~llY~S~Dl~~W~~~~~l~~-~~~-------~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~ 345 (704)
+.+.+.+.+|. |+..+.... ..+ +...-|-|-+|+.++ +++|..|..+
T Consensus 161 ~~i~i~~l~~~--~~~~g~~~~i~~~~~~we~~g~~~~EGP~i~k~~G---------------~YYL~ys~~g 216 (468)
T 3akh_A 161 TSLFIAKMANP--WTISGTPTEISQPTLSWETVGYKVNEGPAVIQHGG---------------KVFLTYSASA 216 (468)
T ss_dssp BEEEEEEEEET--TEEEEEEEEEECCCSGGGCSSSCBEEEEEEEEETT---------------EEEEEEEESC
T ss_pred CcEEEEEeCCC--ceecCccEEecCCCcccccCCCccccCCEEEEECC---------------EEEEEEEeCC
Confidence 34555566553 665443211 111 123578888888642 7788888655
|
| >3zxk_A Hiaxhd3; hydrolase, sugar binding protein; HET: XYP EPE; 1.44A {Humicola insolens} PDB: 3zxj_A* 3zxl_A* | Back alignment and structure |
|---|
Probab=98.57 E-value=1.5e-06 Score=98.83 Aligned_cols=164 Identities=12% Similarity=0.071 Sum_probs=101.7
Q ss_pred CCCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCC------------CCCCcEEeee
Q 005279 128 KNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQW------------YDIMGVWTGS 195 (704)
Q Consensus 128 ~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~------------yD~~Gv~SGS 195 (704)
.|+.-||. +++++|.|+||--... | ...+-...|+||+||+..+.+|....+ -...|+|..+
T Consensus 14 ~g~~~DP~-iir~~~~YY~~~st~~----~-~pg~~i~~S~DLvnW~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~WAP~ 87 (542)
T 3zxk_A 14 WEDHPALE-VFRVGSVFYYSSSTFA----Y-SPGAPVLKSYDLVHWTPVTHSVPRLNFGSNYDLPSGTPGAYVKGIWAST 87 (542)
T ss_dssp CSCCCSCE-EEEETTEEEEECCCBT----E-ESEEEEEEESSSSSCEEEEEEESSCCSCGGGGCCSSTTTTTTCSBCSCE
T ss_pred CCCCCCCe-EEEECCEEEEEEecCc----c-CCCeEEEEcCCCCCccccccccccCCccccccccCCcccccCCceECCc
Confidence 35678997 6888999999843211 1 124667889999999999887743211 1136899999
Q ss_pred EEEec-CCcEEEEEecccCCceeeEEEEEeCCCCCC-----ccce---eEeeCCCceecCCCCCCCcCccCCeeEEecCC
Q 005279 196 ATILP-DGKLMMLYTGSTNESVQVQNLAYPADPSDP-----LLIK---WVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSE 266 (704)
Q Consensus 196 avv~~-dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~-----~l~~---W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~ 266 (704)
+.... +|++||+|+.. ..+.+|++++...| .|++ |++. +... ....||.+++ ++|
T Consensus 88 i~~~~~~G~fYly~~~~-----~~~~v~~a~~p~GPf~~g~~l~~~~~ws~~----~~~~------~~~iDp~~f~-DdD 151 (542)
T 3zxk_A 88 LRYRRSNDRFYWYGCVE-----GRTYLWTSPGGNALANNGEVPPSAWNWQHT----ATID------NCYYDAGLLI-DDD 151 (542)
T ss_dssp EEEETTTTEEEEEEEET-----TEEEEEEEECTTGGGTTTCCCGGGCCCEEE----EEES------SCCTTCEEEE-CTT
T ss_pred EEEECCCCEEEEEEECC-----CcEEEEEECCCCCCccccccccccCccccc----cccC------CCCCCCcEEE-cCC
Confidence 86532 49999999874 34778888776433 0111 6542 2111 2346999666 678
Q ss_pred CeEEEEEeeecCCeeEEEEEE-eCCCCCcEEecc-eeccCCCCCceeeeeeEEcC
Q 005279 267 GKWRIAIGSRINRTGITFVYD-TKDFINYELLRG-VLHGVPNTGMWECVDFYPVS 319 (704)
Q Consensus 267 g~w~Mv~Gs~~~~~G~~llY~-S~Dl~~W~~~~~-l~~~~~~~gmWECPdlf~l~ 319 (704)
|+.||+.|. .+ +.+.+ ++|+..=.-... ++.. ......|-|-+|+.+
T Consensus 152 G~~Yl~~g~----~~-i~~~eL~~d~~~~~~~~~~i~~~-~~g~~~EgP~i~k~~ 200 (542)
T 3zxk_A 152 DTMYIAYGN----PT-INVAQLSPDGTRQVRVQQRVYAH-PQGQTVEGARMYKIR 200 (542)
T ss_dssp SCEEEEECS----SS-EEEEEECTTSSSEEEEEEEEECC-TTCCCCEEEEEEEET
T ss_pred CCEEEEEcC----CC-EEEEEeCCccCcccCCcEEEEeC-CCCccccccEEEEEC
Confidence 999999974 23 33333 455543221111 2221 111268999999986
|
| >3k1u_A Beta-xylosidase, family 43 glycosyl hydrolase; structural genomics, APC20493, family 43 GL hydrolase, PSI-2; HET: MSE; 1.55A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=98.43 E-value=4.3e-06 Score=88.31 Aligned_cols=184 Identities=11% Similarity=0.056 Sum_probs=106.5
Q ss_pred cCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeeccccc--c-cCCCCCCCcEEeeeEEEecCCcEEEEE
Q 005279 132 NDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAM--V-ADQWYDIMGVWTGSATILPDGKLMMLY 208 (704)
Q Consensus 132 NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL--~-Pd~~yD~~Gv~SGSavv~~dG~~~~~Y 208 (704)
-||. ++.+++.|+||+...+.. -.+-...|+||+||++..... . +.......++|..+++ ..||+++|+|
T Consensus 18 aDP~-ii~~~d~yY~~~st~~~~-----~g~~i~~S~DL~~w~~~~~~~~~~~~~~~~~~~~~WAP~v~-~~~G~yylyy 90 (330)
T 3k1u_A 18 ADPM-IYKHNDGYYYFTASVPEY-----DRIEVRKAKTIEGLRNAEPVDVWRRHESGEMSNLIWAPEIH-FINGAWYIYF 90 (330)
T ss_dssp EEEE-EEECTTSCEEEEEECTTC-----CEEEEEEESSTGGGTTSCCEEEEECCSSSTTSEEEEEEEEE-EETTEEEEEE
T ss_pred CCCE-EEEECCEEEEEEeccCCC-----CCEEEEEcCCcCCccCCcceeecccCCCCccCCCeECCEEE-EECCeEEEEE
Confidence 5996 677888899998765432 246678899999998765322 2 2233345689999986 5799999999
Q ss_pred ecccCCc-----eeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec--CCee
Q 005279 209 TGSTNES-----VQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI--NRTG 281 (704)
Q Consensus 209 TG~~~~~-----~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~--~~~G 281 (704)
+...... ...+..+++.+..+|.-..|+.. ..+....+ ..-.||.+++ +.+++|+|+.+... ...+
T Consensus 91 s~~~~~~~~~~~~~~~~~~~~~~~~gP~~~~~~~~---~~~~~~~~---~~~IDp~vf~-Ddd~~~~~~~~~~~~~~~~~ 163 (330)
T 3k1u_A 91 AAAPDKNIEDDTFNHRMFVIQNENENPFTGNWVEK---GRIKTAWE---SFSLDATIFE-HNEKLYYVWAQQDINIKGHS 163 (330)
T ss_dssp EEESSSCCBTTBCCCEEEEEEECSSSTTSSCCEEE---EECCCSSC---SCEEEEEEEE-ETTEEEEEEEECCTTSSSSB
T ss_pred EeccCCCCCCcccceeeeEEEeCCCCCcccccccc---ccccCCCC---CCccCceEEE-ECCccEEEEeecCCCcCCCc
Confidence 9754321 12234455544445544456652 12222111 1236999654 56677777665432 1223
Q ss_pred EEEEEEeCCCCCcEEecce--ecc------CCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCC
Q 005279 282 ITFVYDTKDFINYELLRGV--LHG------VPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDD 346 (704)
Q Consensus 282 ~~llY~S~Dl~~W~~~~~l--~~~------~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~ 346 (704)
.+.+.+.++ .++..+.. +.. ..+...-|-|-+|+.++ +++|..|....
T Consensus 164 ~i~i~~l~~--~~~~~g~~~~i~~~~~~~e~~~~~~~EGp~i~k~~G---------------~YYL~ys~~~~ 219 (330)
T 3k1u_A 164 NIYIAEMEN--PWTLKTKPVMLTKPELEWEIKGFWVNEGPAVLKKNG---------------KIFITYSASAT 219 (330)
T ss_dssp EEEEEEEEE--TTEECSCCEEEECSCSGGGCSSSCBEEEEEEEEETT---------------EEEEEEEESCS
T ss_pred eEEEEECCC--CccccCCcEEecCCCccccccCCceeeCCEEEEECC---------------EEEEEEEeCCC
Confidence 344444432 13443321 111 01223569999998752 78888876554
|
| >3qz4_A Endo-1,4-beta-xylanase D; 5-bladed beta-propeller fold, xylan degradation, structural joint center for structural genomics, JCSG; HET: EPE; 1.74A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.34 E-value=9.3e-06 Score=85.48 Aligned_cols=170 Identities=15% Similarity=0.130 Sum_probs=104.6
Q ss_pred CCcccccccccceeecCC--CCc----cCCCcceEE----CCEEEEEEeeCCCCCCCCCcEEEEEEeCCCc-ceeecccc
Q 005279 111 TNNMLSWQRTAFHFQPQK--NWM----NDPNGPVFY----KGWYHLFYQYNPNGAIWGDIVWGHAVSKDLI-HWYHLPLA 179 (704)
Q Consensus 111 ~~~~~~w~Rp~~Hf~P~~--gWm----NDPNG~~y~----~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLv-hW~~lp~A 179 (704)
+..+..|.....-|.+.. .|. --|. ++++ +|+|||||..+..+. +....|+|+|+|.. .|+.++..
T Consensus 51 S~DLv~W~~~g~~l~~~~~~~~~~~~~wAP~-v~~~~~~~~Gkyylyyt~~~~~~--~~~~i~va~s~~p~Gpw~~~~~p 127 (311)
T 3qz4_A 51 SKNLKTWKEETVILEMGKNVSWANGNAWAPC-IEEKKIDGKYKYFFYYSANPTTN--KGKQIGVAVADSPTGPFTDLGKP 127 (311)
T ss_dssp ESSSSSCEECCCCEEBTTTBTTEEEEEEEEE-EEEEEETTEEEEEEEEEEEETTC--SSCEEEEEEESSTTCCCEECSSC
T ss_pred CCCCCCcEECceecccccCCCcccCCcCCCe-eEEeeecCCCEEEEEEEeccCCC--CCeeEEEEEECCCCCCceECCcc
Confidence 344667766555555542 342 2464 6788 999999999875432 24678999999986 89987643
Q ss_pred cccCCCCCCCcEEeeeEEEec-CCcEEEEEecccCCceeeEEEEE-eCCCCCCccceeEeeCCCceecCCCCC---CCcC
Q 005279 180 MVADQWYDIMGVWTGSATILP-DGKLMMLYTGSTNESVQVQNLAY-PADPSDPLLIKWVKYPGNPVLVPPPGI---GAKD 254 (704)
Q Consensus 180 L~Pd~~yD~~Gv~SGSavv~~-dG~~~~~YTG~~~~~~q~q~lA~-S~D~~D~~l~~W~K~~~nPVl~~p~g~---~~~~ 254 (704)
+..........+..+++++++ ||+++|+|.+ +.+.+|. +.| +.+|... ...++ .|.+. ....
T Consensus 128 ~~~~~~~g~~~~iDp~vf~dd~dG~~yl~~g~------~~i~~~~l~~d-----~~~~~~~-~~~i~-~~~~~~~~~~~~ 194 (311)
T 3qz4_A 128 IITSSPTGRGQQIDVDVFTDPVSGKSYLYWGN------GYMAGAELNDD-----MLSIKEE-TTVVL-TPKGGTLQTYAY 194 (311)
T ss_dssp SBCSCTTSSSBSCCCEEEECTTTCCEEEEECB------SSCEEEEBCTT-----SSSBCGG-GCEEC-CCCCCCTTTTCC
T ss_pred eEcCCCCCCcccccccEEEECCCCcEEEEEcC------CCEEEEEeCCc-----ccccCCC-ceEEe-CCCCCcccccce
Confidence 333321112346788888776 8999999965 1233454 333 2455432 12333 23221 1112
Q ss_pred ccCCeeEEecCCCeEEEEEeeecCCe--eEEEEEEeCCCC-CcEEec
Q 005279 255 FRDPTTAWLTSEGKWRIAIGSRINRT--GITFVYDTKDFI-NYELLR 298 (704)
Q Consensus 255 fRDP~Vvw~~~~g~w~Mv~Gs~~~~~--G~~llY~S~Dl~-~W~~~~ 298 (704)
+--|++ + +.+|+|||++.+..... -.+.+++|+++. -|+..+
T Consensus 195 ~EgP~i-~-k~~g~YyL~~s~~~~~~~~y~~~~~~S~~~~GPw~~~~ 239 (311)
T 3qz4_A 195 REAPYV-I-YRKGIYYFFWSVDDTGSPNYHVVYGTAQSPLGPIEVAK 239 (311)
T ss_dssp CEEEEE-E-EETTEEEEEEEESCTTSTTCEEEEEEESSTTCCCEEEE
T ss_pred eeccEE-E-EECCEEEEEEEcCCCCCCCceEEEEEcCCCCCCCEeCC
Confidence 346884 4 46899999988764221 267788999987 488764
|
| >1uv4_A Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hydrolase, propeller, catalysis; 1.50A {Bacillus subtilis} SCOP: b.67.2.1 | Back alignment and structure |
|---|
Probab=98.16 E-value=3e-05 Score=80.68 Aligned_cols=147 Identities=17% Similarity=0.168 Sum_probs=89.4
Q ss_pred cCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCc--ceeecccccccCCCCCCCcEEeeeEEEecCCcEEEEEe
Q 005279 132 NDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLI--HWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYT 209 (704)
Q Consensus 132 NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLv--hW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YT 209 (704)
-.|. +++++|+|||||..+..+. ++...++|+|+|+. .|++....|..... +...+..+++++++||+.+|+|.
T Consensus 74 wAP~-v~~~~G~yylyyt~~~~~~--~~~~i~va~s~~p~~Gpw~~~~~~l~~~~~-~~~~~iDp~vf~d~dG~~Yl~~g 149 (293)
T 1uv4_A 74 WAPD-IQYYNGKYWLYYSVSSFGS--NTSAIGLASSTSISSGGWKDEGLVIRSTSS-NNYNAIDPELTFDKDGNPWLAFG 149 (293)
T ss_dssp EEEE-EEEETTEEEEEEEECCTTC--SCEEEEEEEESCTTTTCCEEEEEEEEECTT-SSSCCCSCEEEECTTSCEEEEEC
T ss_pred ecce-EEEECCEEEEEEEecCCCC--CcceEEEEECCCCCCCCCccCCccEecCCC-CCCCCCCCCeEECCCCCEEEEEE
Confidence 3454 5778999999999765432 34678999999998 99986544443221 12245688887788999999996
Q ss_pred cccCCceeeEEEEEe-CCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec-----CCeeEE
Q 005279 210 GSTNESVQVQNLAYP-ADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI-----NRTGIT 283 (704)
Q Consensus 210 G~~~~~~q~q~lA~S-~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~-----~~~G~~ 283 (704)
... +.+.++.. .|. .++... ...++..+.+ ..-+-.|.+ + +.+|+|||++.... +..-.+
T Consensus 150 ~~~----~~i~~~~l~~d~-----~~~~g~-~~~i~~~~~~--~~~~EgP~i-~-k~~g~yyL~~s~~~~~~g~~~~y~~ 215 (293)
T 1uv4_A 150 SFW----SGIKLTKLDKST-----MKPTGS-LYSIAARPNN--GGALEAPTL-T-YQNGYYYLMVSFDKCCDGVNSTYKI 215 (293)
T ss_dssp BST----TCEEEEEECTTT-----CSEEEE-EEEEECCTTT--TTCEEEEEE-E-EETTEEEEEEEEECSSSSSCCEEEE
T ss_pred ecC----CCEEEEEECchh-----CccCCc-ceEEeecCCC--CCccCccEE-E-EECCEEEEEEEeCCCcCCCCCcceE
Confidence 532 22344543 332 233211 0123322211 123457884 4 46899999987642 222357
Q ss_pred EEEEeCCCC-CcEE
Q 005279 284 FVYDTKDFI-NYEL 296 (704)
Q Consensus 284 llY~S~Dl~-~W~~ 296 (704)
.+++|+++. -|+.
T Consensus 216 ~~~~s~~~~GP~~~ 229 (293)
T 1uv4_A 216 AYGRSKSITGPYLD 229 (293)
T ss_dssp EEEEESSTTCCCBC
T ss_pred EEEEeCCCCCCCCc
Confidence 788998864 4554
|
| >1w2t_A Beta fructosidase; hydrolase, glycosidase, invertase, raffinose; HET: SUC GLA CIT; 1.87A {Thermotoga maritima} SCOP: b.29.1.19 b.67.2.3 PDB: 1uyp_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=4.4e-05 Score=84.34 Aligned_cols=152 Identities=12% Similarity=0.124 Sum_probs=95.4
Q ss_pred CCcccccccccceeecCCC--CccCCCcceEECCEEEEEEeeCCC-CCCC-CCcEEEEEEeCCCcceee--cccccccCC
Q 005279 111 TNNMLSWQRTAFHFQPQKN--WMNDPNGPVFYKGWYHLFYQYNPN-GAIW-GDIVWGHAVSKDLIHWYH--LPLAMVADQ 184 (704)
Q Consensus 111 ~~~~~~w~Rp~~Hf~P~~g--WmNDPNG~~y~~G~YHLFYQ~nP~-~~~w-G~~~WGHAvS~DLvhW~~--lp~AL~Pd~ 184 (704)
+..+..|.+...=+.|... =+-.|+ .+.++|+|||||.-+.. ...+ ....-++|+|+|+.+|+. ..+.|.+..
T Consensus 51 S~Dlv~W~~~~~aL~p~~~~~g~~sgs-av~~~g~~~l~YTg~~~~~~~~~~~~~q~lA~S~D~~~w~k~~~~Pvi~~~p 129 (432)
T 1w2t_A 51 SDDLVHWRHLPVALYPDDETHGVFSGS-AVEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKYDGNPVISKPP 129 (432)
T ss_dssp ESSSSSCEEEEEEECCSSTTEEEEEEE-EEEETTEEEEEEEEEECCCSSCCCEEEEEEEEESSSSCCEECTTCCSBCSCS
T ss_pred cCCCcCeEECCccCCCCCCCCCEEeeE-EEEECCEEEEEEecCccCCCCCCceEEEEEEEeCCCCeEEecCCCceEeCCC
Confidence 4456788655433445322 011233 34579999999986543 2222 246789999999999998 444454332
Q ss_pred CCCCCcEEeeeEEEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEec
Q 005279 185 WYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLT 264 (704)
Q Consensus 185 ~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~ 264 (704)
.....++-..+++ ..+|+++|+|.+........+.++.|.| |++|+.. .++... .+ ...+--|.+ + +
T Consensus 130 ~~~~~~fRDP~Vf-~~dg~~~m~~g~~~~~~~g~i~ly~S~D-----l~~W~~~--g~~~~~-~~--g~~~EcP~l-f-~ 196 (432)
T 1w2t_A 130 EEGTHAFRDPKVN-RSNGEWRMVLGSGKDEKIGRVLLYTSDD-----LFHWKYE--GAIFED-ET--TKEIDCPDL-V-R 196 (432)
T ss_dssp STTEEEEEEEEEE-ECSSSEEEEEEEEETTTEEEEEEEEESS-----SSSCEEE--EEEEEE-TT--CSCCEEEEE-E-E
T ss_pred ccccccccCCEEE-EECCEEEEEEEEecCCCCcEEEEEECCC-----CCCceEc--cccccC-CC--CCEEECCeE-E-E
Confidence 1112345677764 4599999999876443345677888888 4899886 344432 11 234667884 4 4
Q ss_pred CCCeEEEEEeee
Q 005279 265 SEGKWRIAIGSR 276 (704)
Q Consensus 265 ~~g~w~Mv~Gs~ 276 (704)
-+|+|+|+++.+
T Consensus 197 ~~g~~vL~~s~~ 208 (432)
T 1w2t_A 197 IGEKDILIYSIT 208 (432)
T ss_dssp ETTEEEEEEEET
T ss_pred ECCEEEEEEeCC
Confidence 578999999865
|
| >3kst_A Endo-1,4-beta-xylanase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=98.02 E-value=7.7e-05 Score=78.37 Aligned_cols=163 Identities=14% Similarity=0.108 Sum_probs=100.1
Q ss_pred CCcccccccccceeecCCCCc----cCCCcceEE--CCEEEEEEeeCCCCCCCCCcEEEEEEeCCCc-ceeeccc-cccc
Q 005279 111 TNNMLSWQRTAFHFQPQKNWM----NDPNGPVFY--KGWYHLFYQYNPNGAIWGDIVWGHAVSKDLI-HWYHLPL-AMVA 182 (704)
Q Consensus 111 ~~~~~~w~Rp~~Hf~P~~gWm----NDPNG~~y~--~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLv-hW~~lp~-AL~P 182 (704)
+..+..|.+...-+.+...|. -.|. +++. +|+|||||..+ .+.++|+|+|.. .|+.... .+..
T Consensus 55 S~DLv~W~~~g~~l~~~~~~~~~~~wAP~-v~~~~~~g~~yl~yt~~--------~~i~va~s~~p~Gpw~~~~~~p~~~ 125 (306)
T 3kst_A 55 SDDLKNWKREGQALSATDSYGTWGFWAPE-VYYVESKKKFYLFYSAE--------EHICVATSTTPEGPFRQEVKQPIWS 125 (306)
T ss_dssp ESSSSEEEEEEEEEEGGGSSCSSCCEEEE-EEEETTTTEEEEEEEET--------TEEEEEEESSTTCCCBCSSCCCSSS
T ss_pred eCCccccEECceecCCCCcccccccccCe-EEEECCCCEEEEEEECC--------CcEEEEEcCCCCCCcEeCCCccccC
Confidence 445668877665566655553 2343 4477 99999999865 257999999987 7987531 1211
Q ss_pred CCCCCCCcEEeeeEEEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCC---CcCccCCe
Q 005279 183 DQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIG---AKDFRDPT 259 (704)
Q Consensus 183 d~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~---~~~fRDP~ 259 (704)
.....+++++++||+.+|+|...... +.+.+|...+. +.+|.......++.+...++ ..-+--|.
T Consensus 126 ------~~~iDp~vf~D~dG~~Yl~~~~~~~g--~~i~~~~ls~d----~~~~~~~~~~~~~~~~~~w~~~~~~~~EgP~ 193 (306)
T 3kst_A 126 ------EKSIDTSLFIDDDGTPYLYFVRFTDG--NVIWVAQMTDD----LMSIKTETLNQCIKAEVSWELLQGKVAEGPS 193 (306)
T ss_dssp ------SCCEEEEEEECTTSCEEEEEEEESSS--EEEEEEEBCTT----SSCBCGGGCEEEECCCSGGGCSSSSBEEEEE
T ss_pred ------CCcccceEEEeCCCCEEEEEEEeCCC--CEEEEEEeCcc----cccccCcceeeeccCCccceecCCCceecce
Confidence 35678998888899999999754322 33455553321 35665432222332211111 12233677
Q ss_pred eEEecCCCeEEEEEeeec--CCeeEEEEEEeCCCC-CcEE
Q 005279 260 TAWLTSEGKWRIAIGSRI--NRTGITFVYDTKDFI-NYEL 296 (704)
Q Consensus 260 Vvw~~~~g~w~Mv~Gs~~--~~~G~~llY~S~Dl~-~W~~ 296 (704)
+ + +.+|+|||++.+.. +..-++.+++|+++. -|+.
T Consensus 194 i-~-k~~G~YYL~~S~~~~~~~~y~v~~a~S~s~~GPw~~ 231 (306)
T 3kst_A 194 L-L-KKNGVYYLIYSANHYENKGYGVGYATSDTPMGPWVK 231 (306)
T ss_dssp E-E-EETTEEEEEEEESCTTSTTCEEEEEEESSTTCCCEE
T ss_pred E-E-EECCEEEEEEEeCCCCCCCceEEEEEeCCCCCCCEe
Confidence 4 4 46899999997653 222357788999976 6887
|
| >1gyh_A Arabinan endo-1,5-alpha-L-arabinosidase A; arabinanase, hydrolase, propeller, catalysis, pseudomonas; 1.89A {Cellvibrio cellulosa} SCOP: b.67.2.1 PDB: 1gyd_B 1gye_B* | Back alignment and structure |
|---|
Probab=98.02 E-value=7.1e-05 Score=78.78 Aligned_cols=174 Identities=16% Similarity=0.194 Sum_probs=99.2
Q ss_pred CcccccccccceeecCCCCc-----------cCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCC--cc----ee
Q 005279 112 NNMLSWQRTAFHFQPQKNWM-----------NDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDL--IH----WY 174 (704)
Q Consensus 112 ~~~~~w~Rp~~Hf~P~~gWm-----------NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DL--vh----W~ 174 (704)
..+..|.+...=|.+...|. -.|. +++++|+|||||..+..+. .....|+|+|+|+ .. |+
T Consensus 34 ~DL~~W~~~g~~l~~~~~~~~~~~~~~~~~~wAP~-v~~~~g~~ylyyt~~~~~~--~~~~igva~s~~~dp~gp~~~w~ 110 (318)
T 1gyh_A 34 KDRVNWRYSDRAFATEPTWAKRVSPSFDGHLWAPD-IYQHKGLFYLYYSVSAFGK--NTSAIGVTVNKTLNPASPDYRWE 110 (318)
T ss_dssp SSSSEEEEEEESSSSCCTTHHHHCTTCCSEEEEEE-EEEETTEEEEEEEECCTTS--CCEEEEEEEESCSCTTSTTCCCE
T ss_pred CCCCCccCCCcccCCCcccccccCCCcCcccccCe-EEEECCEEEEEEEeccCCC--CcceEEEEEeCCCCCCCCCccee
Confidence 34556755443344433342 2343 5778999999999775432 2466899999983 23 99
Q ss_pred ecccccccCCCCCCCcEEeeeEEEecCCcEEEEEecccCCceeeEEEEEeC-CC---CCCccceeEeeCCC--ce-ecCC
Q 005279 175 HLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPA-DP---SDPLLIKWVKYPGN--PV-LVPP 247 (704)
Q Consensus 175 ~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~-D~---~D~~l~~W~K~~~n--PV-l~~p 247 (704)
+.+..+.+....+...+..+++++++||+.+|+|.+.. +.+.+|... |. ++ +.+|+....+ ++ +...
T Consensus 111 ~~~~v~~~~~~~~~~~~iDp~vf~D~dG~~Yl~~g~~~----~~i~~~~l~~d~~~~g~--~~~w~~~~~~~~~~~~~~~ 184 (318)
T 1gyh_A 111 DKGIVIESVPQRDLWNAIAPAIIADDHGQVWMSFGSFW----GGLKLFKLNDDLTRPAE--PQEWHSIAKLERSVLMDDS 184 (318)
T ss_dssp EEEEEEEECTTTCSSCCCCCEEEECTTSCEEEEECBST----TCEEEEEBCTTSSSBCS--SCCEEEEECCCCCTTSCTT
T ss_pred cCCcccccCCCCCCCCcccCCeEECCCCCEEEEeeccC----CCEEEEEeCCccccccc--eeecceecccCcceeeccc
Confidence 87654443222223346688887778999999996532 123455432 31 11 2456543211 11 1110
Q ss_pred CCCCCcCccCCeeEEecCCCeEEEEEeee-----cCCeeEEEEEEeCCCC-CcEEe
Q 005279 248 PGIGAKDFRDPTTAWLTSEGKWRIAIGSR-----INRTGITFVYDTKDFI-NYELL 297 (704)
Q Consensus 248 ~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~-----~~~~G~~llY~S~Dl~-~W~~~ 297 (704)
+.....+--|.+ + +.+|+|||++.+. .+..-.+.+++|+++. -|+..
T Consensus 185 -~~~~~~~EgP~i-~-k~~g~yYL~~s~~~~~~g~~~~y~~~~~rS~s~~GP~~~~ 237 (318)
T 1gyh_A 185 -QAGSAQIEAPFI-L-RKGDYYYLFASWGLCCRKGDSTYHLVVGRSKQVTGPYLDK 237 (318)
T ss_dssp -SCCSCCEEEEEE-E-EETTEEEEEEEESCCSCGGGCCCEEEEEEESSTTSCCBCT
T ss_pred -CCCCcceeccEE-E-EECCEEEEEEEeCCCcCCCCCcceEEEEEcCCCCCCCCcC
Confidence 111123456884 4 4689999998753 1222367788998864 46553
|
| >3cu9_A Intracellular arabinanase; glycosyl hydrolase, high resolution, beta-prope geobacillus stearothermophilus, hydrolase; HET: GOL; 1.06A {Geobacillus stearothermophilus} PDB: 3d61_A* 3d60_A 3d5y_A 3d5z_A* 1wl7_A | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00027 Score=74.24 Aligned_cols=171 Identities=16% Similarity=0.235 Sum_probs=96.7
Q ss_pred CCcccccccccceeecCCCCc------------cCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCC---cc---
Q 005279 111 TNNMLSWQRTAFHFQPQKNWM------------NDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDL---IH--- 172 (704)
Q Consensus 111 ~~~~~~w~Rp~~Hf~P~~gWm------------NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DL---vh--- 172 (704)
+..+..|.+...=|.+...|- -.|. ++|++|+|||||..+..+. +....|+|+|+|+ -.
T Consensus 50 S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~~~wAP~-v~~~~g~yylyyt~~~~~~--~~~~igva~s~~~dP~gp~~~ 126 (314)
T 3cu9_A 50 SEDGVHWENMGWVFPSLPDWYKQYVPEKDEDHLWAPD-ICFYNGIYYLYYSVSTFGK--NTSVIGLATNQTLDPRDPDYE 126 (314)
T ss_dssp ESSSSEEEEEEESCSSCCTTHHHHCTTCCSCEEEEEE-EEEETTEEEEEEEECCTTC--CCEEEEEEEESCSCTTSTTCC
T ss_pred CcCCCCccCCCcccCCcchhhhccCCCcccCceecCc-EEEECCEEEEEEEeccCCC--CCceEEEEEeCCCCCCCCCcC
Confidence 345667765544444443442 2343 5678999999999775432 2467899999984 23
Q ss_pred eeecccccccCCCCCCCcEEeeeEEEecCCcEEEEEecccCCceeeEEEEEeCC-CCCCccceeEeeCCCceecCCCCCC
Q 005279 173 WYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPAD-PSDPLLIKWVKYPGNPVLVPPPGIG 251 (704)
Q Consensus 173 W~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D-~~D~~l~~W~K~~~nPVl~~p~g~~ 251 (704)
|++....+.... .+...+..+++++++||+.+|+|.+... .+.++...+ .+.+. ..++. ..+...+. .
T Consensus 127 w~~~~~~~~~~~-~~~~~~iDp~vf~D~dG~~Yl~~g~~~~----~i~~~~l~~d~~~~~-~~~~~---~~~~~~~~--~ 195 (314)
T 3cu9_A 127 WKDMGPVIHSTA-SDNYNAIDPNVVFDQEGQPWLSFGSFWS----GIQLIQLDTETMKPA-AQAEL---LTIASRGE--E 195 (314)
T ss_dssp CEEEEEEEEECT-TSSSCCCSCEEEECTTSCEEEEECBSTT----CEEEEECCTTTCSCC-TTCCC---EEEECCSS--S
T ss_pred cccCCeEecCCC-CCCCCccCCCeEEcCCCCEEEEEeccCC----cEEEEEECcccCccc-CCCce---EEecccCC--C
Confidence 998654333221 1223456888877789999999976421 234554332 21110 01110 01111111 1
Q ss_pred CcCccCCeeEEecCCCeEEEEEeee-----cCCeeEEEEEEeCCCC-CcEEe
Q 005279 252 AKDFRDPTTAWLTSEGKWRIAIGSR-----INRTGITFVYDTKDFI-NYELL 297 (704)
Q Consensus 252 ~~~fRDP~Vvw~~~~g~w~Mv~Gs~-----~~~~G~~llY~S~Dl~-~W~~~ 297 (704)
...+--|.+ + +.+|+|||++... .+..-.+.+++|+++. -|+..
T Consensus 196 ~~~~EgP~i-~-k~~G~yyL~~s~~~~~~g~~~~y~~~~~~s~s~~GP~~~~ 245 (314)
T 3cu9_A 196 PNAIEAPFI-V-CRNGYYYLFVSFDFCCRGIESTYKIAVGRSKDITGPYVDK 245 (314)
T ss_dssp SCCEEEEEE-E-EETTEEEEEEEESCCSSGGGCCCEEEEEEESSTTSCCBCT
T ss_pred CCccCccEE-E-EECCEEEEEEEcCCcccCCCCcceEEEEEeCCCCCCCCcC
Confidence 123456884 4 4689999998753 1222267788999875 45543
|
| >3qee_A Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; 5-bladed beta propeller, hydrolase; 1.64A {Cellvibrio japonicus} PDB: 3qed_A* 3qef_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=0.0007 Score=71.13 Aligned_cols=162 Identities=10% Similarity=0.067 Sum_probs=96.3
Q ss_pred cccccccccceeecC-CCC----ccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCc-ceee-cccccccCC-
Q 005279 113 NMLSWQRTAFHFQPQ-KNW----MNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLI-HWYH-LPLAMVADQ- 184 (704)
Q Consensus 113 ~~~~w~Rp~~Hf~P~-~gW----mNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLv-hW~~-lp~AL~Pd~- 184 (704)
.+..|.....-+.+. ..| +--|. +++++|+|||||..+..+..+ ....|+|+|+|.. .|++ .+..|....
T Consensus 52 DLv~W~~~g~~l~~~~~~~~~~~~WAP~-i~~~~Gkyylyyt~~~~~~~~-~~~i~va~s~~p~Gpw~~~~~~pl~~~~~ 129 (307)
T 3qee_A 52 DMANWEAHGPGLRAKDFTWAKGDAWASQ-VIERNGKFYWYVTVRHDDTKP-GFAIGVAVGDSPIGPFKDALGKALITNDM 129 (307)
T ss_dssp SSSSCEEEEEEEEGGGSTTEEEEEEEEE-EEEETTEEEEEEEEEECTTSC-SEEEEEEEESSTTCCCEESSSSCSBCGGG
T ss_pred CCCCceECccccccCCCCcccCCccCce-EEEECCEEEEEEEeccCCCCC-ceEEEEEEECCCCCCCEeCCCCeeEecCc
Confidence 355676554444432 233 33454 578899999999987654332 3678999999954 8998 343232211
Q ss_pred ---CCCCCcEEeeeEEEecCCcEEEEEecccCCceeeEEEEE-eCCCCCCccceeEeeCCCce-ecCCCCCCCcCccCCe
Q 005279 185 ---WYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAY-PADPSDPLLIKWVKYPGNPV-LVPPPGIGAKDFRDPT 259 (704)
Q Consensus 185 ---~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~-S~D~~D~~l~~W~K~~~nPV-l~~p~g~~~~~fRDP~ 259 (704)
.........+++++++||+.+|+|.+. ...++. +.| +.+|... ++ |..+. .-+--|.
T Consensus 130 ~~~~~~~~~~iDp~vf~DddG~~Yl~~g~~------~i~~~~l~~d-----~~~~~g~---~~~i~~~~----~~~EgP~ 191 (307)
T 3qee_A 130 TTDTPIDWDDIDPSVFIDDDGQAYLFWGNT------RPRYAKLKKN-----MVELDGP---IRAIEGLP----EFTEAIW 191 (307)
T ss_dssp CCSSCCSCCSCCCEEEECTTSCEEEEECSS------SCEEEEECTT-----SSSEEEE---EEECCCCT----TEEEEEE
T ss_pred cccCCCCcCcccCceEECCCCCEEEEEeCC------cEEEEEECCc-----cccccCc---eEEeCCCC----CccCceE
Confidence 001123567888877899999999653 122333 444 3566532 22 22121 1234688
Q ss_pred eEEecCCCeEEEEEeeecCCeeEEEEEEeCCCC-CcEEec
Q 005279 260 TAWLTSEGKWRIAIGSRINRTGITFVYDTKDFI-NYELLR 298 (704)
Q Consensus 260 Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~S~Dl~-~W~~~~ 298 (704)
+ + +.+|+|||++.+.. .-.+.+.+|+++. -|+..+
T Consensus 192 i-~-k~~g~YyL~~s~~~--~~~~~~~~s~~~~GP~~~~~ 227 (307)
T 3qee_A 192 V-H-KYQDNYYLSYAMGF--PEKIGYAMGKSIKGPWVYKG 227 (307)
T ss_dssp E-E-ECC-CEEEEEEETT--TTEEEEEEESSTTCCCEEEE
T ss_pred E-E-EECCEEEEEEECCC--CcEEEEEECCCCCCCcEECC
Confidence 4 4 57899999988752 2356677999876 688764
|
| >3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=0.0017 Score=73.29 Aligned_cols=165 Identities=12% Similarity=0.120 Sum_probs=93.9
Q ss_pred cccccccccceeecCC--CC----ccCCCcceEE--CCEEEEEEeeCCCCCCCCCcEEEEEEeCCCc-ceeecccccccC
Q 005279 113 NMLSWQRTAFHFQPQK--NW----MNDPNGPVFY--KGWYHLFYQYNPNGAIWGDIVWGHAVSKDLI-HWYHLPLAMVAD 183 (704)
Q Consensus 113 ~~~~w~Rp~~Hf~P~~--gW----mNDPNG~~y~--~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLv-hW~~lp~AL~Pd 183 (704)
.+..|.....-|.+.. .| +--|. ++|+ +|+|||||.... +..++....|+|+|+|.. .|+.... +.|-
T Consensus 93 DLv~W~~~g~~l~~~~~~~~~~~~~WAP~-v~~~~~~Gkyymy~~~~~-~~~~~~~~igvats~~p~Gpw~~~g~-~~p~ 169 (526)
T 3vsf_A 93 DLVNWEYRGEVLSRNSAPELNHCNIERPK-VMYNASTGEFVMWMHWEN-GINYGQARAAVAYSKTPDGKFTYIRS-FRPM 169 (526)
T ss_dssp SSSSCEEEEEEEETTSSGGGSSCEEEEEE-EEECTTTCCEEEEEEEEC-SSCSCCCEEEEEEESSSSSCCEEEEE-ECSS
T ss_pred CCCCcCCCCccCCCCCCcCcccCceECCE-EEEECCCCEEEEEEEeeC-CCCCCcceEEEEEcCCCCCCCEeccc-cccc
Confidence 3556755443343321 12 33343 5665 899999998762 334556789999999987 7987532 1121
Q ss_pred C---CC----CCCcEEeeeEEEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCcc
Q 005279 184 Q---WY----DIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFR 256 (704)
Q Consensus 184 ~---~y----D~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fR 256 (704)
. +. +...+..+++++++||+.+|+|.+..+. .+.++.-.+. +.++... +...-+ + ..+-
T Consensus 170 ~~~g~~~~~~~~~~~iDp~vf~D~dG~~Yl~~~~~~~~---~i~i~~l~~d----~~~~~~~---~~~~~~-g---~~~E 235 (526)
T 3vsf_A 170 QDTGVMDHGLPGYMSRDCNVFVDTDGKGYFISAANENM---DLHLYELTPD----YKNIASL---KAKLFV-G---QQRE 235 (526)
T ss_dssp CTTCCEETTEESCCCCSEEEEECTTSCEEEEEEETTTT---EEEEEEECTT----SSSEEEE---EEEEST-T---SCCE
T ss_pred cccccccCCCCCcccccccEEECCCCCEEEEEEecCCC---ceEEEEcCCC----cccccCc---eEEeCC-C---CCcC
Confidence 1 11 1235678888888899999999865322 2344443332 2344332 221111 1 2345
Q ss_pred CCeeEEecCCCeEEEEEeeecCCe-eEEEEEEeCCCC-CcEE
Q 005279 257 DPTTAWLTSEGKWRIAIGSRINRT-GITFVYDTKDFI-NYEL 296 (704)
Q Consensus 257 DP~Vvw~~~~g~w~Mv~Gs~~~~~-G~~llY~S~Dl~-~W~~ 296 (704)
.|++ + +.+|+|||++....... -.+.+++|+++. -|+.
T Consensus 236 gP~i-~-k~~G~YYL~~S~~tg~~~~~~~~a~S~s~~GPw~~ 275 (526)
T 3vsf_A 236 APCL-I-KRNGYYYLITSGCTGWNPNQAKYAYSKDLASGWSQ 275 (526)
T ss_dssp EEEE-E-ESSSCEEEEEECCCTTSCCCEEECEESCSSSCCCC
T ss_pred CeEE-E-EECCEEEEEEcCCCCcCCCceEEEEeCCCCCCcee
Confidence 7984 5 46899999986432111 146677888764 3443
|
| >3c2u_A Xylosidase/arabinosidase; tetramer, glycoside hydrolase, GH43, alpha-L- arabinofuranosidase; HET: B3P; 1.30A {Selenomonas ruminantium} PDB: 1y7b_A* 1yi7_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=0.0017 Score=73.44 Aligned_cols=152 Identities=14% Similarity=0.166 Sum_probs=91.0
Q ss_pred ccCCCcceEECCEEEEEEeeCC-CCCCCCCcEEEEEEeCCCcc-eeecccccccCCCCCCCcEEeeeEEEecCCcEEEEE
Q 005279 131 MNDPNGPVFYKGWYHLFYQYNP-NGAIWGDIVWGHAVSKDLIH-WYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLY 208 (704)
Q Consensus 131 mNDPNG~~y~~G~YHLFYQ~nP-~~~~wG~~~WGHAvS~DLvh-W~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~Y 208 (704)
+--|. ++|++|+|||||.... .+..+.+...++|+|+|... |++ |..+ .. ..+.+++++++||+.+|+|
T Consensus 72 ~WAP~-i~~~~g~~yly~t~~~~~~g~~~~~~~~va~s~~p~Gpw~~-p~~~-~~------~~iDp~~f~DddG~~Yl~~ 142 (538)
T 3c2u_A 72 IWAPD-LSYADGKFWLIYTDVKVVDGMWKDCHNYLTTAEDIKGPWSK-PILL-NG------AGFDASLFHDPSGKKYLVN 142 (538)
T ss_dssp ECSCE-EEEETTEEEEEEEEECCCSSSCCCEEEEEEEESSTTCCCCC-CEEE-EC------SCSCCEEEECTTSCEEEEE
T ss_pred EECCe-EEEECCEEEEEEEeccCCCCCcccccEEEEEECCCCCCccc-cEec-CC------CcCCCeeEECCCCCEEEEE
Confidence 44564 6889999999998532 22233456778999999875 986 4333 11 2457888878899999999
Q ss_pred ecccC--C--ceeeEEEEEeCCCCCCccceeEeeCCCc-eecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec-CCeeE
Q 005279 209 TGSTN--E--SVQVQNLAYPADPSDPLLIKWVKYPGNP-VLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI-NRTGI 282 (704)
Q Consensus 209 TG~~~--~--~~q~q~lA~S~D~~D~~l~~W~K~~~nP-Vl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~-~~~G~ 282 (704)
..... . ..+.+.++...+.. ++ ..+.+ +|..+.+ ....--|++ + +.+|+|||++.+.. +..-.
T Consensus 143 ~~~~~~~~~~~~~~i~~~~l~~d~------~~-~~g~~~~i~~~~~--~~~~EgP~i-~-k~~G~YYL~~s~gg~~~~~~ 211 (538)
T 3c2u_A 143 MYWDQRVYHHNFYGIALQEYSVAE------EK-LIGKPEIIYKGTD--IAYTEGPHL-Y-YINDMYYLMTAEGGTTYQHS 211 (538)
T ss_dssp EEECCCTTSCSEEEEEEEEEETTT------TE-ECSCCEEEECCCT--TCCCEEEEE-E-EETTEEEEEEEESCSSTTCE
T ss_pred EecCCccCCCCCCCEEEEEECCcc------CC-CCCCCEEEecCCC--CCccccceE-E-EECCEEEEEEecCCCCCCeE
Confidence 74321 1 12345555433211 11 11222 2222221 123456884 4 46899999987642 21125
Q ss_pred EEEEEeCCCC-CcEEec--ceec
Q 005279 283 TFVYDTKDFI-NYELLR--GVLH 302 (704)
Q Consensus 283 ~llY~S~Dl~-~W~~~~--~l~~ 302 (704)
+.+++|+++. -|+... +++.
T Consensus 212 ~~~~rS~s~~GP~~~~~~~pil~ 234 (538)
T 3c2u_A 212 ETIARSKTIHGPYEIQPDYPLLS 234 (538)
T ss_dssp EEEEEESSTTCCCEECTTCCSBC
T ss_pred EEEEEECCCCCCCccCCCCceEe
Confidence 7788999976 688754 3554
|
| >1yif_A Beta-1,4-xylosidase; glycosidase, xylan, structural genomics, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=97.46 E-value=0.0026 Score=71.65 Aligned_cols=150 Identities=13% Similarity=0.108 Sum_probs=89.9
Q ss_pred CCccCCCcceEECCEEEEEEeeC-CCCCCCCCcEEEEEEeCCCc-ceeecccccccCCCCCCCcEEeeeEEEecCCcEEE
Q 005279 129 NWMNDPNGPVFYKGWYHLFYQYN-PNGAIWGDIVWGHAVSKDLI-HWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMM 206 (704)
Q Consensus 129 gWmNDPNG~~y~~G~YHLFYQ~n-P~~~~wG~~~WGHAvS~DLv-hW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~ 206 (704)
+-+--|. ++|++|+|||||... ..+..|.....+.|+|+|.. .|++ |+.+ .. ..+.+++++++||+.+|
T Consensus 70 ~~~WAP~-i~~~~g~~yl~yt~~~~~~g~~~~~~~~va~s~~p~Gpw~~-p~~~-~~------~~iDp~~f~D~dG~~Yl 140 (533)
T 1yif_A 70 GGVWAPC-LSYSDGKFWLIYTDVKVVDGAWKDCHNYLVTCETINGDWSE-PIKL-NS------SGFDASLFHDTDGKKYL 140 (533)
T ss_dssp CBBCSCE-EEEETTEEEEEEEEECCCSSSCCCEEEEEEEESSTTSCCCC-CEEC-CC------SCSCCEEEECTTSCEEE
T ss_pred CCEECce-EEEECCEEEEEEEeccCCCCCcccccEEEEEeCCCCCCccc-cEEc-CC------CcCCCceEECCCCCEEE
Confidence 3355664 688999999999853 22333445678999999986 6986 4433 11 24678888788999999
Q ss_pred EEecccC-C---ceeeEEEEE-eCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec-CCe
Q 005279 207 LYTGSTN-E---SVQVQNLAY-PADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI-NRT 280 (704)
Q Consensus 207 ~YTG~~~-~---~~q~q~lA~-S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~-~~~ 280 (704)
+|.+... . ..+.+.+|. +.|. .+... +...|+. +.+ ..-.--|++ + +.+|+|||++.+.. ...
T Consensus 141 ~~~~~~~~~g~~~~~~i~~~~l~~d~-----~~~~g-~~~~i~~-~~~--~~~~EgP~i-~-k~~G~YYL~~s~gg~~~~ 209 (533)
T 1yif_A 141 LNMLWDHRIDRHSFGGIVIQEYSDKE-----QKLIG-KPKVIFE-GTD--RKLTEAPHL-Y-HIGNYYYLLTAEGGTRYE 209 (533)
T ss_dssp EEEEECCCTTSCSEEEEEEEEEETTT-----TEECS-CCEEEEC-CCT--TCCCEEEEE-E-EETTEEEEEEEESCSSTT
T ss_pred EEEecccccCCCCCCCEEEEEECCcc-----CCCCC-CcEEEEc-CCC--CCccccceE-E-EECCEEEEEEeCCCCCCC
Confidence 9985321 1 123455554 3332 22111 1122332 211 122346884 4 46899999987642 212
Q ss_pred eEEEEEEeCCCC-CcEEec
Q 005279 281 GITFVYDTKDFI-NYELLR 298 (704)
Q Consensus 281 G~~llY~S~Dl~-~W~~~~ 298 (704)
-.+.+++|+++. -|+..+
T Consensus 210 ~~v~~~rs~s~~GP~~~~~ 228 (533)
T 1yif_A 210 HAATIARSANIEGPYEVHP 228 (533)
T ss_dssp CEEEEEEESSTTCCCEECT
T ss_pred eEEEEEEECCCCceeeeCC
Confidence 267788999875 688753
|
| >1yrz_A Xylan beta-1,4-xylosidase; structural genomics, nysgxrc target T1997, PSI, structure initiative; 2.00A {Bacillus halodurans} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=97.45 E-value=0.0012 Score=74.43 Aligned_cols=153 Identities=11% Similarity=0.077 Sum_probs=91.0
Q ss_pred ccCCCcceEECCEEEEEEeeCC-CCCCCCCcEEEEEEeCCCc-ceeecccccccCCCCCCCcEEeeeEEEecCCcEEEEE
Q 005279 131 MNDPNGPVFYKGWYHLFYQYNP-NGAIWGDIVWGHAVSKDLI-HWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLY 208 (704)
Q Consensus 131 mNDPNG~~y~~G~YHLFYQ~nP-~~~~wG~~~WGHAvS~DLv-hW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~Y 208 (704)
+-.|. ++|++|+|||||.... .+..+...+.++|+|+|.. .|++ |..+ ....+.+++++++||+.+|+|
T Consensus 74 ~wAP~-i~~~~g~~yl~yt~~~~~~g~~~~~~~~va~s~~p~Gpw~~-p~~~-------~~~~iDp~vf~D~dG~~Yl~~ 144 (528)
T 1yrz_A 74 IWAPC-LSYHDGTFYLIYTDVKQWHGAFKDAHNYLVTAQNIEGPWSD-PIYL-------NSSGFDPSLFHDDDGRKWLVN 144 (528)
T ss_dssp ECSCE-EEEETTEEEEEEEEEEECSSSCCEEEEEEEEESSSSSCCCC-CEEC-------CCSCSCCEEEECTTSCEEEEE
T ss_pred EECCe-EEEECCEEEEEEecccCCCCCcccceEEEEEeCCCCCCccc-cEEC-------CCCcCCCceEECCCCCEEEEE
Confidence 44664 6889999999998532 1222334557899999987 4986 4333 123567888878899999996
Q ss_pred ecccC-C---ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec-CCeeEE
Q 005279 209 TGSTN-E---SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI-NRTGIT 283 (704)
Q Consensus 209 TG~~~-~---~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~-~~~G~~ 283 (704)
..... . ..+.+.++...+.. .+.... ...++... + ..-+--|++ + +.+|+|||++.+.. ...-.+
T Consensus 145 ~~~~~~~~~~~~~~i~~~~l~~d~----~~~~g~-~~~i~~~~-~--~~~~EgP~i-~-k~~G~YYL~~s~~g~~~~~~~ 214 (528)
T 1yrz_A 145 MIWDYRKGNHPFAGIILQEYSEAE----QKLVGP-VKNIYKGT-D--IQLTEGPHL-Y-KKDGYYYLLVAEGGTEYEHAA 214 (528)
T ss_dssp EEECCCTTSCSEEEEEEEEEETTT----TEEEEE-EEEEECCC-T--TCCCEEEEE-E-EETTEEEEEEEESCSSTTCEE
T ss_pred eeccCCCCCCCCCeEEEEEECCcc----CCCCCC-CEEEEcCC-C--CCccCCCEE-E-EECCEEEEEEeCCCCCCCcEE
Confidence 53321 1 12445566533311 222211 12233211 1 123456884 4 46899999987642 212257
Q ss_pred EEEEeCCCC-CcEEec--ceec
Q 005279 284 FVYDTKDFI-NYELLR--GVLH 302 (704)
Q Consensus 284 llY~S~Dl~-~W~~~~--~l~~ 302 (704)
.+++|+++. -|+... +++.
T Consensus 215 ~~~rs~~~~GP~~~~~~~pil~ 236 (528)
T 1yrz_A 215 TLARSQSIDGPYETDPSYPLVT 236 (528)
T ss_dssp EEEEESSTTCCCEECTTCCSEE
T ss_pred EEEEECCCCCCCCcCCCCeEEE
Confidence 788999986 788763 4554
|
| >3nqh_A Glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.11A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0009 Score=74.12 Aligned_cols=160 Identities=11% Similarity=0.147 Sum_probs=95.2
Q ss_pred cccccccccceeecCCC-CccCCCc------ceE--ECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCc-ceeeccccccc
Q 005279 113 NMLSWQRTAFHFQPQKN-WMNDPNG------PVF--YKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLI-HWYHLPLAMVA 182 (704)
Q Consensus 113 ~~~~w~Rp~~Hf~P~~g-WmNDPNG------~~y--~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLv-hW~~lp~AL~P 182 (704)
.|..|.....=|.+... ++ .++. ++| ++|+|||||-.+..+ .+....|.|+|++.. .|+...+.+..
T Consensus 60 DLvnW~~~G~aL~~~~~~~~-~~~~~~WAP~V~y~~~dGkYYLyyt~~~~~--~~~~~igVAtSdsP~GPwt~~gpl~~~ 136 (441)
T 3nqh_A 60 DLVNWKFERVVLPMQSSGIL-GPDRVGERVKVMKCPSTGEYVMYMHADDMN--YKDPHIGYATCSTIAGEYKLHGPLLYE 136 (441)
T ss_dssp SSSSCEEEEEEECCCSSSTT-STTEEEEEEEEEECTTTCCEEEEEEEEETT--SCSCEEEEEEESSTTSCCEEEEECEET
T ss_pred CCCCcEECceeeccCCcccc-CCCCccCCceeEEEccCCEEEEEEEeCCCC--CCcceEEEEEeCCCCCCceEcceeecC
Confidence 45577655544444322 22 2222 455 499999999876532 345788999999965 79986544333
Q ss_pred CCCCCCCcEEeeeEEEecCCcEEEEEecccCCceeeEEEE-EeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeE
Q 005279 183 DQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLA-YPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTA 261 (704)
Q Consensus 183 d~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA-~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vv 261 (704)
+.. .+.+.+++++++||+.+|+|.+. .++ .+.| +.++.. .++...++ ..+--|+ +
T Consensus 137 g~~---~~~IDPsvF~DdDGk~YL~~g~~--------~I~eLs~D-----~~~~~g---~~~~i~~g----~~~EgP~-i 192 (441)
T 3nqh_A 137 GKP---IRRWDMGTYQDTDGTGYLLLHGG--------IVYRLSKD-----YRTAEE---KVVSGVGG----SHGESPA-M 192 (441)
T ss_dssp TEE---CCCCSEEEEECTTSCEEEEEGGG--------EEEEECTT-----SSSEEE---EEESCSTT----CCCEEEE-E
T ss_pred CCc---ccccCceEEEeCCCCEEEEeCCC--------cEEEeCCc-----cccccC---ceEEeCCC----CceECcE-E
Confidence 321 13568888888899999999541 133 2333 355543 22222121 1235688 4
Q ss_pred EecCCCeEEEEEeeecCC-eeEEEEEEeCCCC-CcEEecce
Q 005279 262 WLTSEGKWRIAIGSRINR-TGITFVYDTKDFI-NYELLRGV 300 (704)
Q Consensus 262 w~~~~g~w~Mv~Gs~~~~-~G~~llY~S~Dl~-~W~~~~~l 300 (704)
+ +.+|+|||++...... ...+.+++|+++. -|+..+.+
T Consensus 193 ~-K~~G~YYL~~S~~~g~~~~~~~~arS~s~~GPw~~~g~i 232 (441)
T 3nqh_A 193 F-KKDGTYFFLFSNLTSWEKNDNFYFTAPSVKGPWTRQGLF 232 (441)
T ss_dssp E-EETTEEEEEEECSCTTSCCCCEEEEESSTTCCCEEEEES
T ss_pred E-EECCEEEEEEeCCCCcCCCceEEEEeCCCCCCceECCcc
Confidence 5 4689999998763211 1134577888866 57776544
|
| >3c7f_A Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta-propeller fold, beta-sandwich, xylan degradati hydrolase; HET: XYP; 1.55A {Bacillus subtilis} PDB: 3c7e_A* 3c7h_A* 3c7o_A* 3c7g_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0018 Score=72.30 Aligned_cols=148 Identities=11% Similarity=0.133 Sum_probs=89.0
Q ss_pred cCCCcceEE--C--CEEEEEEeeCCCCCCCCCcEEEEEEeCCCcc-eeec-ccccc-cCC-CCC-CCcEEeeeEEEecCC
Q 005279 132 NDPNGPVFY--K--GWYHLFYQYNPNGAIWGDIVWGHAVSKDLIH-WYHL-PLAMV-ADQ-WYD-IMGVWTGSATILPDG 202 (704)
Q Consensus 132 NDPNG~~y~--~--G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvh-W~~l-p~AL~-Pd~-~yD-~~Gv~SGSavv~~dG 202 (704)
-.|. ++|+ + |+|||||--+ ....|+|+|+|... |++. ...|. ++. ..+ ....+.+++++++||
T Consensus 101 WAP~-v~~~~~~g~g~yylyyt~~-------~~~i~va~s~~p~Gpw~~~~g~pli~~~~~g~~~~~~~iDp~vf~DddG 172 (487)
T 3c7f_A 101 WAPS-IAVKKINGKDKFFLYFANS-------GGGIGVLTADSPIGPWTDPIGKPLVTPSTPGMSGVVWLFDPAVFVDDDG 172 (487)
T ss_dssp EEEE-EEEEEETTEEEEEEEEEST-------TBCEEEEEESSTTCCCBCSSSSCSBCTTSTTCTTCSSBCCCEEEECTTS
T ss_pred cchh-eEEEecCCCCeEEEEEEcC-------CcEEEEEEeCCCCCCcccCCCCeEeecCCCCccCCCCccCCceEEcCCC
Confidence 3453 4665 4 7999999643 14589999999986 9974 32222 211 111 124678999888899
Q ss_pred cEEEEEecccCC----------ceeeEEEE-EeCCCCCCccceeEeeCCCce-ecCCCCCCCcCccCCeeEEecCCCeEE
Q 005279 203 KLMMLYTGSTNE----------SVQVQNLA-YPADPSDPLLIKWVKYPGNPV-LVPPPGIGAKDFRDPTTAWLTSEGKWR 270 (704)
Q Consensus 203 ~~~~~YTG~~~~----------~~q~q~lA-~S~D~~D~~l~~W~K~~~nPV-l~~p~g~~~~~fRDP~Vvw~~~~g~w~ 270 (704)
+.+|+|.+.... ..+...+| .+.| +.+|... |+ |..| .-+--|.+ + +.+|+||
T Consensus 173 ~~Yl~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~d-----~~~~~g~---~~~i~~p-----~~~Egp~i-~-k~~G~YY 237 (487)
T 3c7f_A 173 TGYLYAGGGVPGVSNPTQGQWANPKTARVIKLGPD-----MTSVVGS---ASTIDAP-----FMFEDSGL-H-KYNGTYY 237 (487)
T ss_dssp CEEEEEECCCSSTTSCCHHHHHCCCCEEEEEECTT-----SSSEEEE---EEEECCT-----TEEEEEEE-E-EETTEEE
T ss_pred CEEEEECCcccCccccccccccCCCceEEEEECCC-----eeeccCc---cEEecCC-----ceEecceE-E-EECCEEE
Confidence 999999863210 01234455 3444 3677642 32 2222 12456874 4 5689999
Q ss_pred EEEeeecC-------CeeEEEEEEeCCCC-CcEEecceec
Q 005279 271 IAIGSRIN-------RTGITFVYDTKDFI-NYELLRGVLH 302 (704)
Q Consensus 271 Mv~Gs~~~-------~~G~~llY~S~Dl~-~W~~~~~l~~ 302 (704)
|++.+... ....+.+++|+++. -|+..++++.
T Consensus 238 l~ys~~~~~t~~~~~~~~~i~~~~S~s~~GP~~~~~~il~ 277 (487)
T 3c7f_A 238 YSYCINFGGTHPADKPPGEIGYMTSSSPMGPFTYRGHFLK 277 (487)
T ss_dssp EEEEECSSSCCCTTSCTTSEEEEEESSTTCCCEEEEEEEC
T ss_pred EEEECCCCCCcccCCCCceeEEEEcCCCCCCceECceecc
Confidence 98776421 12367778998875 6887665553
|
| >2exh_A Beta-D-xylosidase; glykosidase, hydrolsase, family43, hydrolase; HET: MES; 1.88A {Geobacillus stearothermophilus} SCOP: b.29.1.23 b.67.2.1 PDB: 2exi_A* 2exj_A* 2exk_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.004 Score=70.24 Aligned_cols=154 Identities=12% Similarity=0.122 Sum_probs=90.1
Q ss_pred CCccCCCcceEECCEEEEEEeeCCC-CCCCCCcEEEEEEeCCCc-ceeecccccccCCCCCCCcEEeeeEEEecCCcEEE
Q 005279 129 NWMNDPNGPVFYKGWYHLFYQYNPN-GAIWGDIVWGHAVSKDLI-HWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMM 206 (704)
Q Consensus 129 gWmNDPNG~~y~~G~YHLFYQ~nP~-~~~wG~~~WGHAvS~DLv-hW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~ 206 (704)
+-+--|. ++|++|+|||||..... +..+.....++|+|+|.. .|++ |..+ . .....+++++++||+.+|
T Consensus 71 ~~~WAP~-i~~~~g~~ylyyt~~~~~~g~~~~~~~~va~s~~~~Gpw~~-p~~~-~------~~~iDp~vf~DddG~~Yl 141 (535)
T 2exh_A 71 GGVWAPH-LSYSDGKFWLIYTDVKVVEGQWKDGHNYLVTCDTIDGAWSD-PIYL-N------SSGFDPSLFHDEDGRKYL 141 (535)
T ss_dssp CBBCSCE-EEEETTEEEEEEEEECCCSSSCCCEEEEEEEESSTTSCCCC-CEEC-C------CSCSCCEEEECTTSCEEE
T ss_pred CCEECCe-EEEECCEEEEEEEeccCCCCCccccceEEEEeCCCCCCccc-cEec-C------CCcCCCceEECCCCCEEE
Confidence 3355664 68899999999985322 222345677899999976 5986 4333 1 134678888788999999
Q ss_pred EEecccC--C--ceeeEEEEE-eCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec-CCe
Q 005279 207 LYTGSTN--E--SVQVQNLAY-PADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI-NRT 280 (704)
Q Consensus 207 ~YTG~~~--~--~~q~q~lA~-S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~-~~~ 280 (704)
+|..... . ....+.++. +.|. .+... +...|+. +.+ ..-.--|++ + +.+|+|||++.+.. ...
T Consensus 142 ~~~~~~~~~~~~~~~~i~~~~l~~d~-----~~~~g-~~~~i~~-~~~--~~~~EgP~i-~-k~~G~YYL~~s~ggt~~~ 210 (535)
T 2exh_A 142 VNMYWDHRVDHHPFYGIVLQEYSVEQ-----KKLVG-EPKIIFK-GTD--LRITEGPHL-Y-KINGYYYLLTAEGGTRYN 210 (535)
T ss_dssp EEEEECCCTTSCSEEEEEEEEEETTT-----TEEEE-EEEEEEC-CCT--TCCCEEEEE-E-EETTEEEEEEEESCSSTT
T ss_pred EEEecCCccCCCCCCcEEEEEECCcc-----CCCCC-CcEEEEc-CCC--CCccccceE-E-EECCEEEEEEeCCCCCCC
Confidence 9974321 1 123344554 3332 11111 1122332 211 122346884 4 46899999987642 111
Q ss_pred eEEEEEEeCCCC-CcEEec--ceec
Q 005279 281 GITFVYDTKDFI-NYELLR--GVLH 302 (704)
Q Consensus 281 G~~llY~S~Dl~-~W~~~~--~l~~ 302 (704)
-.+.+++|+++. -|+... +++.
T Consensus 211 ~~~~~~rs~s~~GP~~~~~~~pil~ 235 (535)
T 2exh_A 211 HAATIARSTSLYGPYEVHPDNPLLT 235 (535)
T ss_dssp CEEEEEEESSTTCCCEECTTCCSEE
T ss_pred eEEEEEEeCCCCCCCccCCCcceEe
Confidence 257788999875 677654 3444
|
| >1w18_A Levansucrase; transferase, fructosyl transferase, glycosyltransferase; 2.5A {Gluconacetobacter diazotrophicus} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0027 Score=71.07 Aligned_cols=127 Identities=18% Similarity=0.181 Sum_probs=81.9
Q ss_pred ECCEEEEEEeeCCCCCC-CC------CcEEE------EEEeCC---CcceeecccccccCC-CCC------CCcEEeeeE
Q 005279 140 YKGWYHLFYQYNPNGAI-WG------DIVWG------HAVSKD---LIHWYHLPLAMVADQ-WYD------IMGVWTGSA 196 (704)
Q Consensus 140 ~~G~YHLFYQ~nP~~~~-wG------~~~WG------HAvS~D---LvhW~~lp~AL~Pd~-~yD------~~Gv~SGSa 196 (704)
.+|+|||||--.-+... -| ....+ |+ ++| |.+|+...+.+.+|. .|. ....=...+
T Consensus 173 ~dG~i~LFYTg~~~~~~~~g~~~~~~~Q~Ia~a~~~l~a-~~dgv~~~~w~k~~~l~~~DG~~Yqt~~q~~~~~fRDP~v 251 (493)
T 1w18_A 173 HGNTVSVFYTDVAFNRDANANNITPPQAIITQTLGRIHA-DFNHVWFTGFTAHTPLLQPDGVLYQNGAQNEFFNFRDPFT 251 (493)
T ss_dssp TSCEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEEE-CSSCEEEEEEEEEEEEECCCSSSBCCTTTCTTCCCEEEEE
T ss_pred CCCEEEEEEEecccccccccccCCcceeEEEEeccceec-cCCCccccccccCCceeecCccccccccccCCccccCCEE
Confidence 58999999985432111 11 13344 33 344 678998887788875 343 224456777
Q ss_pred EEec--CCcEEEEEecccCCc----------------------------------eeeEEEEEeCCCCCCccceeEeeCC
Q 005279 197 TILP--DGKLMMLYTGSTNES----------------------------------VQVQNLAYPADPSDPLLIKWVKYPG 240 (704)
Q Consensus 197 vv~~--dG~~~~~YTG~~~~~----------------------------------~q~q~lA~S~D~~D~~l~~W~K~~~ 240 (704)
+.++ ||+.+|++.+++... ...++||...+. .+.+|+-+
T Consensus 252 f~D~~~dG~~YmvFeant~~~~g~~~~~~~~~~y~~~~~~~~~~~~~~~~~a~~~~g~IGLa~~~s~---Dl~~We~~-- 326 (493)
T 1w18_A 252 FEDPKHPGVNYMVFEGNTAGQRGVANCTEADLGFRPNDPNAETLQEVLDSGAYYQKANIGLAIATDS---TLSKWKFL-- 326 (493)
T ss_dssp EECTTSTTCEEEEEEEEBSSCTTCCCCCHHHHCCCTTCTTCCCHHHHHHTTGGGCCEEEEEEEESST---TSCCEEEE--
T ss_pred EecCCCCCCEEEEEEeccCCCCcccccccccccccCCccccchhhhcccccchhccceEEEEEeCCC---CCccceec--
Confidence 6666 499999999876321 245667887643 25789865
Q ss_pred CceecCCCCCCCcCccCCeeEEecCCCeEEEEEeee
Q 005279 241 NPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSR 276 (704)
Q Consensus 241 nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~ 276 (704)
.|++..+.. ...+--|.|+ +.+|+|||+..++
T Consensus 327 ~PL~~a~~v--~deiErP~V~--~~~GkyYLFtSs~ 358 (493)
T 1w18_A 327 SPLISANCV--NDQTERPQVY--LHNGKYYIFTISH 358 (493)
T ss_dssp EEEEECTTT--BSCCEEEEEE--EETTEEEEEEEEC
T ss_pred CccccCCCC--CCcEECCeEE--EECCEEEEEEEcc
Confidence 577775432 2345569965 4689999998866
|
| >3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A* | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0022 Score=71.32 Aligned_cols=147 Identities=17% Similarity=0.202 Sum_probs=85.0
Q ss_pred cCCCCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeeccccc-ccCCCCCCC--cEEeeeEEEecCC
Q 005279 126 PQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAM-VADQWYDIM--GVWTGSATILPDG 202 (704)
Q Consensus 126 P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL-~Pd~~yD~~--Gv~SGSavv~~dG 202 (704)
|...|.=||+- +..+|+++|||-...... -++...-.+..+|.......+..| .|+..++.. .+.-|..++..+|
T Consensus 129 ~~~~~~IDp~v-f~ddG~~Yl~~g~~~~~~-~~~~~i~i~~l~~~~~~~g~~~~i~~~~~~we~~g~~~~EGP~i~k~~G 206 (468)
T 3akh_A 129 PVSSFSLDATT-FVVNGVRHLAWAQRNPAE-DNNTSLFIAKMANPWTISGTPTEISQPTLSWETVGYKVNEGPAVIQHGG 206 (468)
T ss_dssp SSCSCEEEEEE-EEETTEEEEEEEECCTTS-SSSBEEEEEEEEETTEEEEEEEEEECCCSGGGCSSSCBEEEEEEEEETT
T ss_pred CCCCCcCcCeE-EEECCEEEEEEEccCCCC-CCCCcEEEEEeCCCceecCccEEecCCCcccccCCCccccCCEEEEECC
Confidence 34567779974 448999999996432111 112334445555654433333333 344444433 3788888888899
Q ss_pred cEEEEEecccCCceeeEEEEEeCCCCCCcc-ceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCe-EEEEEeee
Q 005279 203 KLMMLYTGSTNESVQVQNLAYPADPSDPLL-IKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGK-WRIAIGSR 276 (704)
Q Consensus 203 ~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l-~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~-w~Mv~Gs~ 276 (704)
.++|+|.+........+++|+|+.+++++. ..|+|. ++|||...+......-.-.. +...++|+ |+|++-+.
T Consensus 207 ~YYL~ys~~g~~~~y~v~~a~s~~~~~~~gP~~w~~~-~~pvl~~~~~~~~~g~GH~s-vv~~~~G~~~~~vyH~~ 280 (468)
T 3akh_A 207 KVFLTYSASATDANYCLGMLSASASADLLNAASWTKS-SQPVFKTSEATGQYGPGHNS-FTVSEDGKSDILVYHDR 280 (468)
T ss_dssp EEEEEEEESCSSTTCEEEEEEEETTSCTTSGGGCEEC-SSCSBCCBTTTTBEEEEEEE-EEECTTSCSEEEEEEEE
T ss_pred EEEEEEEeCCCCCCceEEEEEECCCCCCCCcHHhccC-CceEEEeCCCCceEeCCCce-EEECCCCCEEEEEEecc
Confidence 999999976533334577888864334332 369987 68999753210000111123 33356774 88887654
|
| >2x8s_A Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; 1.50A {Bacillus subtilis} PDB: 2x8f_A 2x8t_A 3lv4_A | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0037 Score=69.77 Aligned_cols=152 Identities=15% Similarity=0.111 Sum_probs=88.5
Q ss_pred CccCCCcceE-ECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCc-ceeecccccccC--------CCCC---CCcEEeeeE
Q 005279 130 WMNDPNGPVF-YKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLI-HWYHLPLAMVAD--------QWYD---IMGVWTGSA 196 (704)
Q Consensus 130 WmNDPNG~~y-~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLv-hW~~lp~AL~Pd--------~~yD---~~Gv~SGSa 196 (704)
-+-.|. +++ ++|+|||||..+..+. +....|+|+|+|.. .|++.+..+... ..|+ ......+++
T Consensus 98 ~~WAP~-vi~~~dGkyylyys~~~~~~--~~~~IgvatSddp~GPw~~~g~~l~~~~~~~~~dg~~~~~~~~~~~IDp~v 174 (470)
T 2x8s_A 98 TLWAAD-VTQLADGKYYMYYNACRGDS--PRSAMGVAVADNIEGPYKNKGIFLKSGMEGTSSDGTPYDATKHPNVVAPHT 174 (470)
T ss_dssp SCCCCE-EEECTTSCEEEEEEEECSSS--CCEEEEEEEESSTTCCCEEEEEEEEECCSSBCTTSSBCCTTTSCCSCCCEE
T ss_pred ceECCe-EEEecCCEEEEEEEeccCCC--CccEEEEEEeCCCCCCceeCCeeeccCcccccccccccccccCCCCCCCCE
Confidence 355665 456 4899999998765332 34678999999998 599886555431 1232 235678898
Q ss_pred EEecCCcEEEEEecccCCceeeEEEEEeC-CCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEee
Q 005279 197 TILPDGKLMMLYTGSTNESVQVQNLAYPA-DPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGS 275 (704)
Q Consensus 197 vv~~dG~~~~~YTG~~~~~~q~q~lA~S~-D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs 275 (704)
++++||+.+|+|.+... .+.++... |.+.+ ..+..+ +..+.... ....--|++++++.+|+|||++..
T Consensus 175 f~DdDG~~Yl~~g~~~~----gI~~~eL~~d~~~~--~~~~~~-~~~i~~g~----~~~~EGP~i~~~K~~G~YYL~~S~ 243 (470)
T 2x8s_A 175 FFDKDGKLWMVYGSYSG----GIFILEMNPKTGFP--LPGQGY-GKKLLGGN----HSRIEGPYVLYNPDTQYYYLYLSY 243 (470)
T ss_dssp EECTTSCEEEEECBSTT----CEEEEEBCTTTSSB--CTTCTT-CEEEECCS----SCSEEEEEEEEETTTTEEEEEEEE
T ss_pred EEcCCCCEEEEeeecCC----cEEEEEECCccCcC--cCCccc-ceEecCCC----CCceeccEEEEEccCCEEEEEEEe
Confidence 88889999999975421 13344332 22111 111100 11122110 112345775444678999999876
Q ss_pred ec-C--CeeEEEEEEeCCCC-CcE
Q 005279 276 RI-N--RTGITFVYDTKDFI-NYE 295 (704)
Q Consensus 276 ~~-~--~~G~~llY~S~Dl~-~W~ 295 (704)
.. . ..-.+.+++|+++. -|+
T Consensus 244 g~~~~~~~y~v~~arS~s~~GP~~ 267 (470)
T 2x8s_A 244 GGLDATGGYNIRVARSKKPDGPYY 267 (470)
T ss_dssp SBSSTTSBCEEEEEEESSTTCCCB
T ss_pred CCCCCCCCceEEEEEECCCCCCCC
Confidence 42 1 12267788998864 344
|
| >3pij_A Beta-fructofuranosidase; five-bladed beta-propeller and beta-sandwich domains, glycos hydrolase family 32, probiotic bacteria, fructose; HET: FRU; 1.80A {Bifidobacterium longum} PDB: 3pig_A* | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0028 Score=71.77 Aligned_cols=155 Identities=15% Similarity=0.143 Sum_probs=94.4
Q ss_pred CCCCCcccccccccceeecCCCCccCCCcc-----eE-ECCEEEEEEeeCCCC----CCCC-CcEEEEEEeCCC--ccee
Q 005279 108 YPWTNNMLSWQRTAFHFQPQKNWMNDPNGP-----VF-YKGWYHLFYQYNPNG----AIWG-DIVWGHAVSKDL--IHWY 174 (704)
Q Consensus 108 ~~~~~~~~~w~Rp~~Hf~P~~gWmNDPNG~-----~y-~~G~YHLFYQ~nP~~----~~wG-~~~WGHAvS~DL--vhW~ 174 (704)
+..+..+++|.+...=+.|.. ..|.+|. +. .+|+++|||--+... ...+ ...-++|+|+|. +||+
T Consensus 85 Ha~S~DLvhW~~~~~aL~P~~--~~d~~g~~SGSav~~~dg~~~l~YTg~~~~~~~~~~~~~~q~q~lA~S~D~gl~~w~ 162 (526)
T 3pij_A 85 HVSSTDMLNWKREPIMFAPSL--EQEKDGVFSGSAVIDDNGDLRFYYTGHRWANGHDNTGGDWQVQMTALPDNDELTSAT 162 (526)
T ss_dssp EEEESSSSSEEECCCCBCCCB--GGGTTEEEEEEEEECTTSCEEEEEEEEEETTSSSGGGCEEEEEEEEEESSTTCSCEE
T ss_pred EEEeCCCCCceeCeeccCCCC--ccccCCeEeceEEEccCCEEEEEEecccCcccccCCCCceeEEEEEEECCCCcceEE
Confidence 444667888986556666755 2466662 22 368999999865211 1111 156789999997 8999
Q ss_pred ecccccc-cCCCCCCCcEEeeeEEEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCc
Q 005279 175 HLPLAMV-ADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAK 253 (704)
Q Consensus 175 ~lp~AL~-Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~ 253 (704)
..++.|. |.. ......=...+. ..+|+++|++.+...+..-.+.+..|.| |++|+.. .+++..+.. ...
T Consensus 163 K~~pvi~~P~~-~~~~~fRDP~V~-~~~g~w~mv~ga~~~~~~G~i~ly~S~D-----l~~W~~~--g~l~~~~~~-~g~ 232 (526)
T 3pij_A 163 KQGMIIDCPTD-KVDHHYRDPKVW-KTGDTWYMTFGVSSADKRGQMWLFSSKD-----MVRWEYE--RVLFQHPDP-DVF 232 (526)
T ss_dssp EEEEEECCCGG-GEEEEEEEEEEE-EETTEEEEEEEEEETTSCEEEEEEEESS-----SSSCEEE--EEEEECSCT-TCC
T ss_pred ECCccccCCCC-ccccccccCEEE-EECCEEEEEEEEecCCCCcEEEEEECCC-----CCcceEc--CcccccCCC-ccC
Confidence 8775553 211 111233455553 4789999998754443334577888988 4899986 454443321 123
Q ss_pred CccCCeeEEecCCC-----eEEEEEeee
Q 005279 254 DFRDPTTAWLTSEG-----KWRIAIGSR 276 (704)
Q Consensus 254 ~fRDP~Vvw~~~~g-----~w~Mv~Gs~ 276 (704)
-|--|- ++. -+| +|+|+++..
T Consensus 233 mwECPd-lf~-l~~~~g~~k~vL~~s~~ 258 (526)
T 3pij_A 233 MLECPD-FSP-IKDKDGNEKWVIGFSAM 258 (526)
T ss_dssp EEEEEE-EEE-EECTTSCEEEEEEEEEE
T ss_pred eEECCE-EEE-ECCCCCceeEEEEEecc
Confidence 456777 342 234 899987754
|
| >3ugf_A Sucrose:(sucrose/fructan) 6-fructosyltransferase; glycoside hydrolase family 32; HET: NAG FUC BMA MAN; 1.70A {Pachysandra terminalis} PDB: 3ugg_A* 3ugh_A* | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0093 Score=67.78 Aligned_cols=136 Identities=11% Similarity=0.196 Sum_probs=85.7
Q ss_pred eCCCcceeecccccccCCCCCCCcEEeeeEEEecCCcEEEEEecccCC---ceeeEEEEEeCCCCCCccceeEeeCCCce
Q 005279 167 SKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNE---SVQVQNLAYPADPSDPLLIKWVKYPGNPV 243 (704)
Q Consensus 167 S~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~---~~q~q~lA~S~D~~D~~l~~W~K~~~nPV 243 (704)
|.+|++|.+...-+.|...+ +-....++-.+|+++|||.-+-.. +...-++|+|+| |+||+..+ ++
T Consensus 11 ~~~~~~~~Rp~yH~~P~~gw----mNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHa~S~D-----LvhW~~~p--~A 79 (546)
T 3ugf_A 11 SNAQLSWQRTAFHFQPERSW----MSDPDGPIFYKGWYHFFYQYNPDNPVWGNNTWGHTVSRD-----LIHWLYLP--LA 79 (546)
T ss_dssp CHHHHHHTSCSSSCCCSSEE----EEEEEEEEEETTEEEEEEEEESSCSSSCSCEEEEEEESS-----SSSCEECC--CC
T ss_pred chhhhhhcCCeEEEeCCCCC----ccCCceeEEECCEEEEEEecCCCCCCCCCcEEEEEEcCC-----cCccccCC--CC
Confidence 56788888876667776522 122333334689999999855322 234578999999 49999963 66
Q ss_pred ecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecC-CeeEEEEEEeCCC-----CCcEEec--ceeccCCCC--Cceeee
Q 005279 244 LVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRIN-RTGITFVYDTKDF-----INYELLR--GVLHGVPNT--GMWECV 313 (704)
Q Consensus 244 l~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~-~~G~~llY~S~Dl-----~~W~~~~--~l~~~~~~~--gmWECP 313 (704)
|.|...++....-.+.++- ..+|+++|++.+..+ ..-...+..|+|. .+|+..+ +++...++. .-+.-|
T Consensus 80 L~P~~~~D~~G~~SGSavv-~~dg~~~l~YTg~~~~~~q~q~lA~S~D~~d~~l~~w~K~~~nPVi~~p~g~~~~~fRDP 158 (546)
T 3ugf_A 80 LAADQWYDMQGVFSGSATC-LPDGRIMMLYTGVTKEMVEMLSLAYPADLSDPLLVEWVKYPGNPILSAPPGVSPTEFRDA 158 (546)
T ss_dssp BCSCSGGGTTCEEEEEEEE-CTTSCEEEEEEEECTTCCEEEEEEEESCTTCTTCCCEEECTTCCCBCCCTTSCTTSCCCB
T ss_pred CCCCcccccCCcCcceEEE-eeCCeEEEEEEeccCCCcEEEEEEEECCCCCCccceeEEcCCCceEeCCCCCCcceeecc
Confidence 7654333333444566433 568999999987642 2234556778885 8999853 555433322 246667
Q ss_pred e
Q 005279 314 D 314 (704)
Q Consensus 314 d 314 (704)
-
T Consensus 159 k 159 (546)
T 3ugf_A 159 S 159 (546)
T ss_dssp C
T ss_pred c
Confidence 6
|
| >1st8_A Fructan 1-exohydrolase IIA; five fold beta propeller; HET: NDG NAG MAN; 2.35A {Cichorium intybus} PDB: 2add_A* 2ade_A* 2aey_A* 2aez_A* | Back alignment and structure |
|---|
Probab=96.59 E-value=0.013 Score=66.57 Aligned_cols=119 Identities=16% Similarity=0.241 Sum_probs=79.1
Q ss_pred CCCCCcccccccccceeecCCCCccCCCcc-----eEE-CCEEEEEEee-CCCCCCCCCcEEEEEEeCCC-----cceee
Q 005279 108 YPWTNNMLSWQRTAFHFQPQKNWMNDPNGP-----VFY-KGWYHLFYQY-NPNGAIWGDIVWGHAVSKDL-----IHWYH 175 (704)
Q Consensus 108 ~~~~~~~~~w~Rp~~Hf~P~~gWmNDPNG~-----~y~-~G~YHLFYQ~-nP~~~~wG~~~WGHAvS~DL-----vhW~~ 175 (704)
+.-+..++.|.+...=+.|.. + .|.+|. +.. +|+++|||.- +.. +...-+.|+|+|. +||+.
T Consensus 54 Ha~S~Dlv~W~~~~~aL~P~~-~-~D~~Gv~SGsav~~~dg~~~l~YTg~~~~----~~q~q~lA~s~D~~d~~l~~w~k 127 (543)
T 1st8_A 54 HAVSYDLVNWIHLDPAIYPTQ-E-ADSKSCWSGSATILPGNIPAMLYTGSDSK----SRQVQDLAWPKNLSDPFLREWVK 127 (543)
T ss_dssp EEEESSSSSEEECCCSBCCCS-G-GGTTEEEEEEEEEETTTEEEEEEEEECTT----SCEEEEEEEESCTTCTTCCCEEE
T ss_pred EEECCCccceEECCeeccCCC-c-cccCCEEcceEEEeeCCEEEEEEEEeCCC----CcEEEEEEEECCCCCCCcceeEE
Confidence 344456778866555556643 2 355553 334 9999999986 542 2467799999985 89998
Q ss_pred c--ccccccCCCCCCCcEEeeeEEEe-cCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEee
Q 005279 176 L--PLAMVADQWYDIMGVWTGSATIL-PDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKY 238 (704)
Q Consensus 176 l--p~AL~Pd~~yD~~Gv~SGSavv~-~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~ 238 (704)
. .+.|.|...+.....=...++.. ++|+++|++.+..+ ..-...++.|+| |++|+..
T Consensus 128 ~~~nPVi~~~~g~~~~~fRDP~vvw~~~~g~w~mv~ga~~~-~~G~i~ly~S~D-----l~~W~~~ 187 (543)
T 1st8_A 128 HPKNPLITPPEGVKDDCFRDPSTAWLGPDGVWRIVVGGDRD-NNGMAFLYQSTD-----FVNWKRY 187 (543)
T ss_dssp CTTCCSBCCCTTCCTTSEECCCCCEECTTSCEEEEEEEEET-TEEEEEEEEESS-----SSSCEEC
T ss_pred cCCCcEEeCCCCCCcCccCCCeEEEECCCCcEEEEEEEecC-CceEEEEEECCC-----CCCcEEC
Confidence 6 34565554444445556664344 68999999976553 234566888888 4899985
|
| >1oyg_A Levansucrase; glycoside hydrolase, beta-propeller, TR; 1.50A {Bacillus subtilis} SCOP: b.67.2.2 PDB: 1pt2_A* 3byl_A 3byn_A* 3byk_A 3byj_A 2vdt_A 3om4_A* 3om7_C* 3om6_A* 3om5_A* 3om2_A* | Back alignment and structure |
|---|
Probab=96.21 E-value=0.048 Score=60.49 Aligned_cols=143 Identities=15% Similarity=0.201 Sum_probs=88.1
Q ss_pred ECCEEEEEEeeCCCCCCCCCcEEEEEE-----eCCC---cceeecccccccCC-CC---C------------CCcEEeee
Q 005279 140 YKGWYHLFYQYNPNGAIWGDIVWGHAV-----SKDL---IHWYHLPLAMVADQ-WY---D------------IMGVWTGS 195 (704)
Q Consensus 140 ~~G~YHLFYQ~nP~~~~wG~~~WGHAv-----S~DL---vhW~~lp~AL~Pd~-~y---D------------~~Gv~SGS 195 (704)
.+|++||||--+-... -.....++|. |+|. ..|+...+.+.++. .| + ....=..-
T Consensus 145 ~dG~i~LfYTg~~~~~-~~~q~I~~a~~~l~~~~dgv~~~~~~~~~~l~~~Dg~~Yq~~~q~~~~~~~~~~~~~~fRDP~ 223 (447)
T 1oyg_A 145 SDGKIRLFYTDFSGKH-YGKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPH 223 (447)
T ss_dssp TTSCEEEEEEEEEGGG-TTEEEEEEEEEEEEECSSCEEEEEEEEEEEEECCCSSSBCCHHHHHHHTGGGGTCCCCCEEEE
T ss_pred cCCEEEEEEEeecCCC-CCceEEEEEecceeecCCCcceecccCCCceEcCCCccccccccccccccccCCCccccCCCe
Confidence 5999999998653321 1234567777 6784 56766667777764 33 1 12334555
Q ss_pred EEEecCCcEEEEEecccCCc-----------------------------------------eeeEEEEE-eCCCCCCccc
Q 005279 196 ATILPDGKLMMLYTGSTNES-----------------------------------------VQVQNLAY-PADPSDPLLI 233 (704)
Q Consensus 196 avv~~dG~~~~~YTG~~~~~-----------------------------------------~q~q~lA~-S~D~~D~~l~ 233 (704)
++ ..+|+++|++.+++... ...+.|++ |.| +.
T Consensus 224 Vf-~d~G~~ymvfgA~t~~~~g~~~~~~l~~w~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~G~Igl~~~s~D-----l~ 297 (447)
T 1oyg_A 224 YV-EDKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDD-----YT 297 (447)
T ss_dssp EE-EETTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEEEEEECTT-----SS
T ss_pred EE-eECCEEEEEEeeecCCCCcccchhhhcchhhcccCcccchhhhhhcccccccccchhcCcEEEEEEcCCC-----CC
Confidence 54 45899999999876431 13455664 544 47
Q ss_pred eeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCC--------eeE-EEEEEeCCCC-CcE
Q 005279 234 KWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINR--------TGI-TFVYDTKDFI-NYE 295 (704)
Q Consensus 234 ~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~--------~G~-~llY~S~Dl~-~W~ 295 (704)
+|+-+ .|++.+. +. ...+--|.+ + +.+|+|||++..+... .+. ++.|.|+.+. -|+
T Consensus 298 ~W~~~--~pL~~~~-~v-~d~~EcPdl-f-k~dGkyyLf~S~~~s~~~~~g~~~~~vy~~g~vsdsl~GPy~ 363 (447)
T 1oyg_A 298 LKKVM--KPLIASN-TV-TDEIERANV-F-KMNGKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYK 363 (447)
T ss_dssp EEEEE--EEEEECT-TT-CSCCEEEEE-E-EETTEEEEEEEEEGGGCCCTTCCTTCEEEEEEEESSTTCCCE
T ss_pred CceEc--cccccCC-CC-CCceEcCcE-E-EECCEEEEEEecCCCcccccCcCCCcEEEEEEEcCCCCCCCe
Confidence 89875 5777643 22 134667984 4 5799999998876311 123 4467888874 354
|
| >2ac1_A Invertase; five fold beta propeller, hydrolase; HET: NAG MAN; 2.15A {Arabidopsis thaliana} PDB: 2xqr_A* 2oxb_A* 2qqw_A* 2qqv_A* 2qqu_A* | Back alignment and structure |
|---|
Probab=96.18 E-value=0.014 Score=66.23 Aligned_cols=119 Identities=18% Similarity=0.244 Sum_probs=78.4
Q ss_pred CCCCCcccccccccceeecCCCCccCCCcc-----eEE-CCEEEEEEee-CCCCCCCCCcEEEEEEeCCC-----cceee
Q 005279 108 YPWTNNMLSWQRTAFHFQPQKNWMNDPNGP-----VFY-KGWYHLFYQY-NPNGAIWGDIVWGHAVSKDL-----IHWYH 175 (704)
Q Consensus 108 ~~~~~~~~~w~Rp~~Hf~P~~gWmNDPNG~-----~y~-~G~YHLFYQ~-nP~~~~wG~~~WGHAvS~DL-----vhW~~ 175 (704)
+.-+..+..|.+...=+.|.. + .|.+|. +.. +|++||||.- +.. +...-+.|+|+|. +||+.
T Consensus 54 Ha~S~Dlv~W~~~~~aL~P~~-~-~D~~G~~SGsav~~~dg~~~l~YTg~~~~----~~~~q~lA~s~D~~d~~l~~w~k 127 (541)
T 2ac1_A 54 HSTSTDLINWDPHPPAIFPSA-P-FDINGCWSGSATILPNGKPVILYTGIDPK----NQQVQNIAEPKNLSDPYLREWKK 127 (541)
T ss_dssp EEEESSSSSBEEEEEEECCCS-G-GGTTCEEEEEEEECTTSCEEEEEEEECTT----SCEEEEEEEESCTTCTTCCCEEE
T ss_pred EEECCCccceEECceeecCCC-c-cccCCEEcceEEEeeCCEEEEEEEEeCCC----CcEEEEEEEECCCCCCCceeEEe
Confidence 344556788876656566654 2 355442 333 8999999986 432 2467799999985 89998
Q ss_pred c--ccccccC--CCCCCCcEEeeeEEEe-cCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEee
Q 005279 176 L--PLAMVAD--QWYDIMGVWTGSATIL-PDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKY 238 (704)
Q Consensus 176 l--p~AL~Pd--~~yD~~Gv~SGSavv~-~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~ 238 (704)
. .+.|.|. ..+....+=...++.. ++|+++|++.+..+. .-...++.|+| |++|++.
T Consensus 128 ~~~nPVi~~~~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~-~G~i~ly~S~D-----l~~W~~~ 189 (541)
T 2ac1_A 128 SPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHR-RGLAITYTSKD-----FLKWEKS 189 (541)
T ss_dssp CTTCCSBCCCTTTCCCTTSEECCCCCEECTTSCEEEEEEEEETT-EEEEEEEEESS-----SSSCEEC
T ss_pred cCCCcEEcCCCCCCCCCCceECCeEEeEeCCCeEEEEEEEecCC-ceEEEEEECCC-----CCCcEEc
Confidence 6 3456554 3343445556664444 489999999766532 34467888888 4899985
|
| >4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A | Back alignment and structure |
|---|
Probab=96.07 E-value=0.041 Score=61.82 Aligned_cols=145 Identities=11% Similarity=0.058 Sum_probs=87.7
Q ss_pred CCCcccccccccceeecCCCCccCCCc-----ceEE-CC-------EEEEEEeeCCCCCCCCCcEEEEEEeCC-Ccceee
Q 005279 110 WTNNMLSWQRTAFHFQPQKNWMNDPNG-----PVFY-KG-------WYHLFYQYNPNGAIWGDIVWGHAVSKD-LIHWYH 175 (704)
Q Consensus 110 ~~~~~~~w~Rp~~Hf~P~~gWmNDPNG-----~~y~-~G-------~YHLFYQ~nP~~~~wG~~~WGHAvS~D-LvhW~~ 175 (704)
-+..+++|.+...=+.|.. .+| .+.. +| .++|||.-+... ..+...-++|+|+| ++||+.
T Consensus 46 ~S~DLvhW~~~~~aL~P~~-----~~g~~SGSav~~~~~~~g~~~~~~~l~YTg~~~~-~~~~q~q~lA~S~D~g~~w~k 119 (492)
T 4ffh_A 46 STTDGVAFTHHGTVMPLRP-----DFPVWSGSAVVDTANTAGFGAGAVVALATQPTDG-VRKYQEQYLYWSTDGGFTFTA 119 (492)
T ss_dssp EESSSSSCEEEEEEECCBT-----TBCCCCEEEEEETTCSSSSCTTEEEEEEEEEGGG-CGGGEEEEEEEESSSSSSCEE
T ss_pred EeCCCCccEECCCCCCCCC-----CCCEEeceEEEeCCCccccCCCcEEEEEeecccC-CCCcEEEEEEEeCCCCceEEE
Confidence 3556788876555566632 233 2333 34 599999865431 23456789999999 789998
Q ss_pred cc-cccccCCCCCCCc---------EEeeeEEEe-cCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCcee
Q 005279 176 LP-LAMVADQWYDIMG---------VWTGSATIL-PDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVL 244 (704)
Q Consensus 176 lp-~AL~Pd~~yD~~G---------v~SGSavv~-~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl 244 (704)
.+ +.|.+....+..+ .=...+... ++|+++|+. +.. ....+..|.| |++|+.. .++.
T Consensus 120 ~~nPvi~~p~~~~~~~~~~~~~~~~fRDP~V~~~~~~g~w~mv~-a~~----~~i~ly~S~D-----L~~W~~~--~~~~ 187 (492)
T 4ffh_A 120 LPDPVIVNTDGRAATTPAEIENAEWFRDPKIHWDTARGEWVCVI-GRL----RYAAFYTSPN-----LRDWTLR--RNFD 187 (492)
T ss_dssp CSSCSBCCTTTTTCCSHHHHHHHTCEEEEEEEEETTTTEEEEEE-EET----TEEEEEEESS-----SSSCEEC--CCEE
T ss_pred cCccccCCCCccccccccccccCCCCcCCEEEEECCCCEEEEEE-ECC----CeEEEEECCC-----CCCceEe--cccc
Confidence 73 3444322112111 557776544 578999998 322 3567888887 5899986 4454
Q ss_pred cCCCCCCCcCccCCeeEEecC----CCeEEEEEee
Q 005279 245 VPPPGIGAKDFRDPTTAWLTS----EGKWRIAIGS 275 (704)
Q Consensus 245 ~~p~g~~~~~fRDP~Vvw~~~----~g~w~Mv~Gs 275 (704)
.... ...-|-.|- ++.-. +++|+|+++.
T Consensus 188 ~~~~--~g~mwECPd-lf~l~~~~~~~k~vL~~s~ 219 (492)
T 4ffh_A 188 YPNH--ALGGIECPD-LFEITADDGTRHWVLAASM 219 (492)
T ss_dssp CSCG--GGCCCEEEE-EEEEECTTSCEEEEEEEEC
T ss_pred ccCC--ccceEECCe-EEEECCCCCCceEEEEEcc
Confidence 4211 113456677 34211 2589999875
|
| >2yfr_A Levansucrase, inulosucrase; fructosyltransferase, glycoside hydrolase family GH68, trans sugar utilization; 1.75A {Lactobacillus johnsonii} PDB: 2yft_A* 2yfs_A* | Back alignment and structure |
|---|
Probab=95.98 E-value=0.11 Score=59.04 Aligned_cols=131 Identities=15% Similarity=0.197 Sum_probs=80.7
Q ss_pred ECCEEEEEEeeCCCCCC-CCCcEEEEEE-------eCC---CcceeecccccccCC-CC-------------CCCcEEee
Q 005279 140 YKGWYHLFYQYNPNGAI-WGDIVWGHAV-------SKD---LIHWYHLPLAMVADQ-WY-------------DIMGVWTG 194 (704)
Q Consensus 140 ~~G~YHLFYQ~nP~~~~-wG~~~WGHAv-------S~D---LvhW~~lp~AL~Pd~-~y-------------D~~Gv~SG 194 (704)
.+|++||||--+-++.. ......+.+. |+| +..|+..++.+.|+. .| +....=..
T Consensus 204 ~DG~l~LFYTG~~~~~~~~~~Q~Ia~a~~~l~~~~s~dgv~~~kw~~~~~l~~~dg~~Yqt~~q~~~~~~~~~~~~FRDP 283 (571)
T 2yfr_A 204 KDGSIQLYYTKVDTSDNNTNHQKLASATVYLNLEKDQDKISIAHVDNDHIVFEGDGYHYQTYDQWKETNKGADNIAMRDA 283 (571)
T ss_dssp TTSCEEEEEEEEECTTTTCCEEEEEEEEEEEEEEGGGTEEEEEEEEEEEEEECCCSSSBCCHHHHHHHCSSCCCCCCEEE
T ss_pred cCCEEEEEEeccccCCCCcccceEEEEEeeeeecccCCCcceecccCCCceecCCCcccccccccccccccCCcccCcCC
Confidence 58999999997644321 1123444432 467 456766666676764 33 23334456
Q ss_pred eEEEecCCcEEEEEecccCCc-----------------------------------------eeeEEEEEeCCCCCCccc
Q 005279 195 SATILPDGKLMMLYTGSTNES-----------------------------------------VQVQNLAYPADPSDPLLI 233 (704)
Q Consensus 195 Savv~~dG~~~~~YTG~~~~~-----------------------------------------~q~q~lA~S~D~~D~~l~ 233 (704)
.++.+++|+++|++.+.+... ...++|+.+.|.. ..+.
T Consensus 284 ~Vf~d~dG~~YMVfgA~t~~~~~~G~~~ly~w~~yg~~~~f~~~~~~~v~~~~~~~~~a~~~~G~IgL~~s~dl~-~n~~ 362 (571)
T 2yfr_A 284 HVIDDDNGNRYLVFEASTGTENYQGDDQIYQWLNYGGTNKDNLGDFFQILSNSDIKDRAKWSNAAIGIIKLNDDV-KNPS 362 (571)
T ss_dssp EEEECTTCCEEEEEEEEBCTTSCCSGGGGGBGGGTCSCHHHHHHHHHHHHHCHHHHHHHHHCCEEEEEEEECSCT-TSCC
T ss_pred eEEEeCCCCEEEEEEeccCCCCcccchhhccccccccccccchhhhccccccccccccchhccceEEEEEcCCCc-CCcc
Confidence 665444699999999875421 2567888987631 1236
Q ss_pred eeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec
Q 005279 234 KWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI 277 (704)
Q Consensus 234 ~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~ 277 (704)
.|+-. .|++.+.. . ...+--|.+ + +.+|+||+++.++.
T Consensus 363 ~We~~--~pL~~~~~-v-~dm~EcP~l-f-~~dG~yyL~~S~q~ 400 (571)
T 2yfr_A 363 VAKVY--SPLISAPM-V-SDEIERPDV-V-KLGNKYYLFAATRL 400 (571)
T ss_dssp EEEEC--CCSEECTT-T-BSCCEEEEE-E-EETTEEEEEEEEEG
T ss_pred cceec--cccccCCC-c-CceeecCcE-E-EECCEEEEEEeCCC
Confidence 79854 57765432 1 235667884 4 46899999987763
|
| >1y4w_A EXO-inulinase; glycoside hydrolase FAMI crystallographic structure, native structure, hydrolase; HET: NAG; 1.55A {Aspergillus awamori} SCOP: b.29.1.19 b.67.2.3 PDB: 1y9g_A* 1y9m_A* | Back alignment and structure |
|---|
Probab=95.89 E-value=0.051 Score=61.29 Aligned_cols=153 Identities=11% Similarity=0.049 Sum_probs=90.2
Q ss_pred CCCCCCccccccccccee----ecCCCCccCCCcc-----eEECC-----------EEEEEEeeCC-CCC--------CC
Q 005279 107 SYPWTNNMLSWQRTAFHF----QPQKNWMNDPNGP-----VFYKG-----------WYHLFYQYNP-NGA--------IW 157 (704)
Q Consensus 107 ~~~~~~~~~~w~Rp~~Hf----~P~~gWmNDPNG~-----~y~~G-----------~YHLFYQ~nP-~~~--------~w 157 (704)
.+..+..+++|.+...=+ .|. +|.+|. +..++ .|+|||.-+- ... ..
T Consensus 52 gHa~S~Dlv~W~~~~~al~~~g~P~----~d~~g~~SGsav~~~~~~~g~~~~~~~~~~l~YTg~~~~~~~~~~~~~~~~ 127 (518)
T 1y4w_A 52 GHAISEDLTHWEEKPVALLARGFGS----DVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQE 127 (518)
T ss_dssp EEEEESSSSSCEEEEEEECCBTTTS----CCCBEEEEEEEEECTTCTTSCCCSSSCCEEEEEEEEESSCEECTTSCEECT
T ss_pred EEEEeCCCccEEECCceEecCCCCC----CCCCceEeeeEEEcCCCccccccCCCccEEEEEeeeecccccccccccccc
Confidence 345566788897655555 443 344442 23333 8999997652 211 01
Q ss_pred CCcEEEEEEeCC-Ccceeec---ccccccCC-CC--CCCcEEeeeEEEe-cCCcEEEEEe-cccCCceeeEEEEEeCCCC
Q 005279 158 GDIVWGHAVSKD-LIHWYHL---PLAMVADQ-WY--DIMGVWTGSATIL-PDGKLMMLYT-GSTNESVQVQNLAYPADPS 228 (704)
Q Consensus 158 G~~~WGHAvS~D-LvhW~~l---p~AL~Pd~-~y--D~~Gv~SGSavv~-~dG~~~~~YT-G~~~~~~q~q~lA~S~D~~ 228 (704)
+...-++|+|+| ++||+.. .+.|.+.. .| ...+.=...++.. ++|+++|+++ |.. ..+.++.|.|
T Consensus 128 ~~q~q~lA~s~D~g~~w~k~~~~~pvi~~~~~~y~~~~~~fRDP~V~~~~~~g~w~mv~~~g~~----~~i~ly~S~D-- 201 (518)
T 1y4w_A 128 DQQSQSIAYSLDDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDESQKWVVVTSIAEL----HKLAIYTSDN-- 201 (518)
T ss_dssp TEEEEEEEEESSTTSSCEECTTTCCSBCSCCTTCGGGTTSEEEEEEEEETTTTEEEEEEEEGGG----TEEEEEEESS--
T ss_pred ceeEEEEEEEcCCCceEEEcCCCCCeEecCCcccccCCCCcCCCcEeEECCCCcEEEEEEecCC----CeEEEEECCC--
Confidence 236779999999 8999987 35555432 33 2345667777544 3689999864 322 2477888887
Q ss_pred CCccceeEeeCCCceecCCCCCCCcCccCCeeEEecC----CCeEEEEEeee
Q 005279 229 DPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTS----EGKWRIAIGSR 276 (704)
Q Consensus 229 D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~----~g~w~Mv~Gs~ 276 (704)
|++|+.. .++....+. ..-|--|-.+-... +++|+|+++..
T Consensus 202 ---L~~W~~~--~~~~~~~~~--~~mwECPdlf~l~~~g~~~~k~vL~~s~~ 246 (518)
T 1y4w_A 202 ---LKDWKLV--SEFGPYNAQ--GGVWECPGLVKLPLDSGNSTKWVITSGLN 246 (518)
T ss_dssp ---SSSCEEE--EEECCCSCC--SSEEEEEEEEEEEBTTSSCEEEEEEEEEE
T ss_pred ---CCCCeEC--ccccccCCC--CCeEECCeEEEeecCCCCceeEEEEeccC
Confidence 4899975 344321111 12355677332212 35899998764
|
| >3zxk_A Hiaxhd3; hydrolase, sugar binding protein; HET: XYP EPE; 1.44A {Humicola insolens} PDB: 3zxj_A* 3zxl_A* | Back alignment and structure |
|---|
Probab=95.82 E-value=0.07 Score=60.58 Aligned_cols=53 Identities=13% Similarity=0.099 Sum_probs=39.2
Q ss_pred CCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCcEEecceec
Q 005279 240 GNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLH 302 (704)
Q Consensus 240 ~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~S~Dl~~W~~~~~l~~ 302 (704)
.||||. .++.||.++. .++.|||+-.+. +...-+-+|+|+||++|+..+..+.
T Consensus 9 ~NPil~-------g~~~DP~iir--~~~~YY~~~st~-~~~pg~~i~~S~DLvnW~~~g~~l~ 61 (542)
T 3zxk_A 9 TNPVLW-------EDHPALEVFR--VGSVFYYSSSTF-AYSPGAPVLKSYDLVHWTPVTHSVP 61 (542)
T ss_dssp ESCSCC-------SCCCSCEEEE--ETTEEEEECCCB-TEESEEEEEEESSSSSCEEEEEEES
T ss_pred cCCccC-------CCCCCCeEEE--ECCEEEEEEecC-ccCCCeEEEEcCCCCCccccccccc
Confidence 389985 3578999764 477999986543 2222467899999999999988764
|
| >3k1u_A Beta-xylosidase, family 43 glycosyl hydrolase; structural genomics, APC20493, family 43 GL hydrolase, PSI-2; HET: MSE; 1.55A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=95.42 E-value=0.051 Score=56.94 Aligned_cols=117 Identities=17% Similarity=0.207 Sum_probs=67.1
Q ss_pred cCCCCccCCCcceEE-CCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccc-cccCCCCCCC--cEEeeeEEEecC
Q 005279 126 PQKNWMNDPNGPVFY-KGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLA-MVADQWYDIM--GVWTGSATILPD 201 (704)
Q Consensus 126 P~~gWmNDPNG~~y~-~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~A-L~Pd~~yD~~--Gv~SGSavv~~d 201 (704)
+..+|.=||+ ++.+ +|.|+||+.+.......+.+ |..--+.|+ .-.-.+.. ..|+..++.. .+.-|..++..+
T Consensus 131 ~~~~~~IDp~-vf~Ddd~~~~~~~~~~~~~~~~~~i-~i~~l~~~~-~~~g~~~~i~~~~~~~e~~~~~~~EGp~i~k~~ 207 (330)
T 3k1u_A 131 AWESFSLDAT-IFEHNEKLYYVWAQQDINIKGHSNI-YIAEMENPW-TLKTKPVMLTKPELEWEIKGFWVNEGPAVLKKN 207 (330)
T ss_dssp SSCSCEEEEE-EEEETTEEEEEEEECCTTSSSSBEE-EEEEEEETT-EECSCCEEEECSCSGGGCSSSCBEEEEEEEEET
T ss_pred CCCCCccCce-EEEECCccEEEEeecCCCcCCCceE-EEEECCCCc-cccCCcEEecCCCccccccCCceeeCCEEEEEC
Confidence 3345556886 4555 56788887765533222222 222224443 21112222 2344433332 456888888899
Q ss_pred CcEEEEEecccCCceeeEEEEEeCCCCCCcc-ceeEeeCCCceecC
Q 005279 202 GKLMMLYTGSTNESVQVQNLAYPADPSDPLL-IKWVKYPGNPVLVP 246 (704)
Q Consensus 202 G~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l-~~W~K~~~nPVl~~ 246 (704)
|.++|+|.+........+++|+|+...+|.. ..|++. .+||+..
T Consensus 208 G~YYL~ys~~~~~~~y~~~~~~s~~~~gP~~~~~~~~~-~~pi~~~ 252 (330)
T 3k1u_A 208 GKIFITYSASATDVNYCIGMLTAEENSNLLDKNSWTKS-QTPVFKT 252 (330)
T ss_dssp TEEEEEEEESCSSTTCEEEEEEEETTSCTTSGGGCEEC-SSCSBCC
T ss_pred CEEEEEEEeCCCCCCceEEEEEECCCCCCCCCcccccc-CCCEEEc
Confidence 9999999865433334578888887766643 457775 5787763
|
| >3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A* | Back alignment and structure |
|---|
Probab=95.03 E-value=0.27 Score=52.71 Aligned_cols=133 Identities=17% Similarity=0.287 Sum_probs=79.0
Q ss_pred eeecccccccCCCC-CCCcEEeeeEEEecCCcEEEEEecccCC-ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCC
Q 005279 173 WYHLPLAMVADQWY-DIMGVWTGSATILPDGKLMMLYTGSTNE-SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGI 250 (704)
Q Consensus 173 W~~lp~AL~Pd~~y-D~~Gv~SGSavv~~dG~~~~~YTG~~~~-~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~ 250 (704)
|+...+.- |...| +...+| .+++..+||++++.|+....+ ......+..|+|+| .+|++.. .+..+..++
T Consensus 6 ~~~~~if~-~~~~~~~~~~~y-p~~v~L~dG~lLa~~~~~~~~~~~~~~~v~rS~DgG----~TW~~~~--~v~~~~~g~ 77 (355)
T 3a72_A 6 LTNVTIFS-PPSDYIVPRTLY-PRNEQLPNGDLLATWENYSPEPPAVYFPIYRSKDHG----KTWNEIS--RVHDTVNGY 77 (355)
T ss_dssp EEEEEEEC-CCTTSCTTSEEE-EEEEECTTSCEEEEEEECCCSSSCCCEEEEEESSTT----SCCEEEE--EECCTTTSS
T ss_pred ceeeeEec-CCcccCCCCCcc-ceEEEcCCCCEEEEEEeecCCCCCceEEEEEEcCCC----cCcCCCc--ccCCCcCCc
Confidence 44443333 33334 455677 777788999999988876432 22345688999987 9999863 232222222
Q ss_pred CCcCcc-CCeeEEecC-------CCeEEEEEeee-cC-CeeEEEEEEeCC-CCCcEEecceeccC---C--C-CCceeee
Q 005279 251 GAKDFR-DPTTAWLTS-------EGKWRIAIGSR-IN-RTGITFVYDTKD-FINYELLRGVLHGV---P--N-TGMWECV 313 (704)
Q Consensus 251 ~~~~fR-DP~Vvw~~~-------~g~w~Mv~Gs~-~~-~~G~~llY~S~D-l~~W~~~~~l~~~~---~--~-~gmWECP 313 (704)
..+ +|. +|.-+ +|++.+...+. .+ ..+.+.+|+|+| .++|+....+.... + + .++|| |
T Consensus 78 ---~~~~~P~-l~~lp~~v~~~~~G~ll~~~~~~~~d~~~~~~~v~~S~D~G~TW~~~~~i~~~~~~~~~~g~~~v~e-P 152 (355)
T 3a72_A 78 ---GLRYQPF-LYSLPERVGSFKKGTLLLAGSSIPTDLSSTDIVLYASQDDGMTWDFVSHIAAGGEARPNNGLTPVWE-P 152 (355)
T ss_dssp ---CEEEEEE-EEECSSCBTTBCTTCEEEEEEECCTTCCCEEEEEEEESSTTSCCEEEEEEEEESCSSCCTTCCCEEE-E
T ss_pred ---ccccCCc-EEecCcccccCCCCcEEEEEeeecCCCCCceEEEEEECCCCccCccCccccccCccccccCCCcccc-c
Confidence 234 676 45333 78877663222 12 245677888865 79999987765421 1 1 24788 5
Q ss_pred eeEEcC
Q 005279 314 DFYPVS 319 (704)
Q Consensus 314 dlf~l~ 319 (704)
+..+.
T Consensus 153 -~~~~~ 157 (355)
T 3a72_A 153 -FLLAN 157 (355)
T ss_dssp -EEEEE
T ss_pred -eEEcc
Confidence 55553
|
| >4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis} | Back alignment and structure |
|---|
Probab=94.89 E-value=0.23 Score=56.12 Aligned_cols=149 Identities=15% Similarity=0.170 Sum_probs=85.9
Q ss_pred ccCCCcceEE--CCEEEEEEeeCCC-C--CCC-------C---CcEEEEEEeCC-CcceeecccccccCCCCC-CCcEE-
Q 005279 131 MNDPNGPVFY--KGWYHLFYQYNPN-G--AIW-------G---DIVWGHAVSKD-LIHWYHLPLAMVADQWYD-IMGVW- 192 (704)
Q Consensus 131 mNDPNG~~y~--~G~YHLFYQ~nP~-~--~~w-------G---~~~WGHAvS~D-LvhW~~lp~AL~Pd~~yD-~~Gv~- 192 (704)
..||+ ++++ +|+-+|||-|... + ..| . ....-..+|+| ..+|.+ |..|.+...-+ -..++
T Consensus 248 ~~nP~-lvvD~~tG~I~L~~~~~~g~~~~~~w~~~~~g~~~~~t~~~~~~~S~D~G~TWs~-p~~l~~~~~~~~~~~~~~ 325 (523)
T 4fj6_A 248 VGDPS-ILVDEKTNTIWVVAAWTHGMGNERAWWNSMPGMTPDETAQLMLVKSEDDGKTWSE-PINITSQVKDPSWYFLLQ 325 (523)
T ss_dssp EEEEE-EEECTTTCCEEEEEEECCSCTTSCGGGTCCSSSSTTTSCEEEEEEESSTTSSCCC-CEECHHHHCCTTCSEEEE
T ss_pred ccCce-EEEECCCCeEEEEEEecccccccccccccccCCCCCcceEEEEEEcCCCCccCCC-CeeecccccCCcceEEec
Confidence 35775 6664 6999999887531 1 111 1 12345677776 699976 43343321100 11223
Q ss_pred -eeeEEEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEE
Q 005279 193 -TGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRI 271 (704)
Q Consensus 193 -SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~M 271 (704)
.|+.++..||++++---+....+...-.+-+|+|.| .+|+... ++- ....+|.++= -++|+.+|
T Consensus 326 g~G~GI~l~dGrLv~P~~~~~~~g~~~s~i~~S~D~G----~TW~~~~--~~~--------~~~~e~~vve-~~dG~L~~ 390 (523)
T 4fj6_A 326 GPGRGITMQDGTLVFPIQFIDATRVPNAGIMYSKDRG----KTWHLHN--LAR--------TNTTEAQVAE-VEPGVLML 390 (523)
T ss_dssp CSEECEECTTSCEEEEEEEECTTSCEEEEEEEESSTT----SSCEECC--CSE--------ETEEEEEEEE-EETTEEEE
T ss_pred CCCcceEEeCCeEEEEEEEEcCCCCEEEEEEEECCCC----CeEEECC--CCC--------ccccCCEEEE-ecCCEEEE
Confidence 355667889997742211222223445677999876 8999853 221 1256888662 25788888
Q ss_pred EEeeecCCeeEEEEEEeCC-CCCcEEec
Q 005279 272 AIGSRINRTGITFVYDTKD-FINYELLR 298 (704)
Q Consensus 272 v~Gs~~~~~G~~llY~S~D-l~~W~~~~ 298 (704)
.+.+.. .|...+|+|.| ...|+...
T Consensus 391 ~~R~~~--~g~r~v~~S~D~G~TWt~~~ 416 (523)
T 4fj6_A 391 NMRDNR--GGSRAVATTKDLGKTWTEHP 416 (523)
T ss_dssp EEEETT--CSBCEEEEESSTTSSCEECT
T ss_pred EEEecC--CCcEEEEEECCCCCccCcCc
Confidence 766543 24456788876 68999743
|
| >3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A* | Back alignment and structure |
|---|
Probab=94.66 E-value=0.45 Score=51.02 Aligned_cols=144 Identities=19% Similarity=0.265 Sum_probs=79.7
Q ss_pred eEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCCCCcEEeeeEEEecCCcEEEEEecccC----
Q 005279 138 VFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTN---- 213 (704)
Q Consensus 138 ~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~---- 213 (704)
...+|...++|.....+..+ ...+.|++|+|..+|... ..+.....+... .-...++..+||+++|.|.-...
T Consensus 155 ~~~~G~l~~~~~~~~~~~~~-~~~~~~~~S~DG~TWs~~-~~~~~~~~~~~r-pg~p~v~~l~dG~l~l~y~~~~~~~~~ 231 (355)
T 3a72_A 155 LANKGKLICYYSDQRDNATY-GQTMVHQVTNDLKNWGPV-VEDVTYPTYTDR-PGMPVVTKLPNGQYFYVYEYGSFFGTE 231 (355)
T ss_dssp EEETTEEEEEEEECCCTTTC-SCEEEEEEESSSSSCCCC-EEEECCSSTTCE-EEEEEEEECTTSCEEEEEEEEBCTTSS
T ss_pred EccCCeEEEEECCCCCCCCC-CcEEEEEECCCCCCCCCC-eeccccCccCCC-CCceEEEECCCCCEEEEEEECCCcccC
Confidence 44699999999765423333 356899999999999753 222222222111 11234556789999998876432
Q ss_pred CceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEec---CCCeEEEEEeeecCCeeEEEEEEeCC
Q 005279 214 ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLT---SEGKWRIAIGSRINRTGITFVYDTKD 290 (704)
Q Consensus 214 ~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~---~~g~w~Mv~Gs~~~~~G~~llY~S~D 290 (704)
........++|.|+ .+|....+.++.. +.+. ...--|+++|.. .+|+-+ +.++. ... +|.|.|
T Consensus 232 ~~~~~~~~~iS~DG-----~tw~~~~~~~~~~-~~~~--~~~g~p~v~~~~~gg~~g~ll-~s~~~---~~~--v~~s~~ 297 (355)
T 3a72_A 232 TYSFPLYYRLSSDP-----ENIASAPGQRLVV-SSGT--QPTSSPYAVWTPYGGENGTII-VSSGT---QGT--LFINKA 297 (355)
T ss_dssp SCBCBEEEEEESST-----TCCTTSCCEECCB-TTCC--CCBSSCEEEEESTTSTTCEEE-EECSS---CSS--EEEESS
T ss_pred CCceeEEEEECCCc-----ccccCcCCcceec-CCCc--ccCCCCeEEECcCCCCCCeEE-EEcCC---CcE--EEEECC
Confidence 12234567888774 7896643223322 2221 224568888853 334322 22211 112 455544
Q ss_pred -C-CCcEEec
Q 005279 291 -F-INYELLR 298 (704)
Q Consensus 291 -l-~~W~~~~ 298 (704)
. ..|+...
T Consensus 298 ~g~~~W~~~~ 307 (355)
T 3a72_A 298 LGEGEWTEIP 307 (355)
T ss_dssp TTCSCBEEEC
T ss_pred CCCCCCeECC
Confidence 4 7888654
|
| >2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A | Back alignment and structure |
|---|
Probab=94.65 E-value=0.39 Score=51.76 Aligned_cols=133 Identities=18% Similarity=0.231 Sum_probs=77.6
Q ss_pred ceeecccccccCCCC-CCCcEEeeeEEEecCCcEEEEEecccCC-ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCC
Q 005279 172 HWYHLPLAMVADQWY-DIMGVWTGSATILPDGKLMMLYTGSTNE-SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPG 249 (704)
Q Consensus 172 hW~~lp~AL~Pd~~y-D~~Gv~SGSavv~~dG~~~~~YTG~~~~-~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g 249 (704)
.|+...+.-.|. .| +...+| ++++..+||++++.|+....+ ......+..|+|+| ++|++.. .|..+..+
T Consensus 10 ~~~~~~if~~~~-~~~~~~~~y-p~~v~L~dG~LLa~~~~~~~~~~~~~~~v~rS~DgG----~TW~~~~--~v~~~~~g 81 (367)
T 2ydt_A 10 TFSNVEIFDPPT-NYRDPQVLY-ARPLELSDGTLLGTWENYSPEPPNVWFPIVKSKDGG----KTWKEIS--KVKDTQNN 81 (367)
T ss_dssp CEEEEEEECCCT-TSCTTSEEE-EEEEECTTSCEEEEEEECCCSSSCCCEEEEEESSTT----SSCEEEE--EECCCSSS
T ss_pred cccceeEecCCc-ccCCCCCCc-eeEEEcCCCCEEEEEEeccCCCCCeEEEEEEECCCC----cCcCcCc--ccCCCCCC
Confidence 455444333333 34 455677 777788999999999876542 22345788999987 9999852 22221112
Q ss_pred CCCcCcc-CCeeEEecC-------CCeEEEEEeeec-C-CeeEEEEEEeCC-CCCcEEecceeccCC-----C-CCceee
Q 005279 250 IGAKDFR-DPTTAWLTS-------EGKWRIAIGSRI-N-RTGITFVYDTKD-FINYELLRGVLHGVP-----N-TGMWEC 312 (704)
Q Consensus 250 ~~~~~fR-DP~Vvw~~~-------~g~w~Mv~Gs~~-~-~~G~~llY~S~D-l~~W~~~~~l~~~~~-----~-~gmWEC 312 (704)
+ ..+ +|. +|.-+ +|+.++...+.. + ..+.+.+|+|+| .++|+....+..... + .+.||
T Consensus 82 ~---~~~~~P~-l~~lP~~i~~~~~G~lL~~~~s~~~d~~~~~i~v~~S~D~G~TW~~~~~i~~g~~~~~~~g~~~v~e- 156 (367)
T 2ydt_A 82 W---GLRYQPQ-LYELPRAFGKYPKGTVLCSGSSIPSDLSETLIEVYASRDKGYTWEFVSHVALGGEALPNPGLTPVWE- 156 (367)
T ss_dssp S---CEEEEEE-EEECSSCBTTBCTTCEEEEEEECCTTCCCEEEEEEEESSSSSCCEEEEEEEEESCSSCCTTCCCEEE-
T ss_pred c---ccccCCe-EEEccccccccCCCcEEEEEecccCCCCCCeEEEEEECCCCCCCcCCeecccCCCcccccCCCcccc-
Confidence 1 223 676 44322 666555433321 2 245677888866 799999876554221 2 24788
Q ss_pred eeeEEc
Q 005279 313 VDFYPV 318 (704)
Q Consensus 313 Pdlf~l 318 (704)
| |..+
T Consensus 157 P-~~~~ 161 (367)
T 2ydt_A 157 P-FLMT 161 (367)
T ss_dssp E-EEEE
T ss_pred c-eEEC
Confidence 5 5443
|
| >2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A | Back alignment and structure |
|---|
Probab=94.47 E-value=2.7 Score=45.15 Aligned_cols=162 Identities=14% Similarity=0.116 Sum_probs=90.3
Q ss_pred eeecCCCCccCCCcc----eE-ECCEEEEEEeeCCCCCCCCCcEEEEEEeCCC-cceeecccccccCCCCCCCcEEeeeE
Q 005279 123 HFQPQKNWMNDPNGP----VF-YKGWYHLFYQYNPNGAIWGDIVWGHAVSKDL-IHWYHLPLAMVADQWYDIMGVWTGSA 196 (704)
Q Consensus 123 Hf~P~~gWmNDPNG~----~y-~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DL-vhW~~lp~AL~Pd~~yD~~Gv~SGSa 196 (704)
=|+|+.+ .+|+++. +. .+|..-++|-..... .+..+++..+|+|. .+|++......+...+ .-++.+++
T Consensus 16 if~~~~~-~~~~~~~yp~~v~L~dG~LLa~~~~~~~~--~~~~~~~v~rS~DgG~TW~~~~~v~~~~~g~--~~~~~P~l 90 (367)
T 2ydt_A 16 IFDPPTN-YRDPQVLYARPLELSDGTLLGTWENYSPE--PPNVWFPIVKSKDGGKTWKEISKVKDTQNNW--GLRYQPQL 90 (367)
T ss_dssp EECCCTT-SCTTSEEEEEEEECTTSCEEEEEEECCCS--SSCCCEEEEEESSTTSSCEEEEEECCCSSSS--CEEEEEEE
T ss_pred EecCCcc-cCCCCCCceeEEEcCCCCEEEEEEeccCC--CCCeEEEEEEECCCCcCcCcCcccCCCCCCc--ccccCCeE
Confidence 4667776 4477632 21 278877766443222 25667788899995 8999864322222222 22456666
Q ss_pred EEec-------CCcEEEEEecccCC-ceeeEEEEEeCCCCCCccceeEeeCCCceecCC-CCC--CCcCccCCeeEEecC
Q 005279 197 TILP-------DGKLMMLYTGSTNE-SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPP-PGI--GAKDFRDPTTAWLTS 265 (704)
Q Consensus 197 vv~~-------dG~~~~~YTG~~~~-~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p-~g~--~~~~fRDP~Vvw~~~ 265 (704)
...+ +|++.+.+.....+ ....+.+.+|+|+| .+|++.. .|...+ +.. +....-+|+.+ ..
T Consensus 91 ~~lP~~i~~~~~G~lL~~~~s~~~d~~~~~i~v~~S~D~G----~TW~~~~--~i~~g~~~~~~~g~~~v~eP~~~--~~ 162 (367)
T 2ydt_A 91 YELPRAFGKYPKGTVLCSGSSIPSDLSETLIEVYASRDKG----YTWEFVS--HVALGGEALPNPGLTPVWEPFLM--TY 162 (367)
T ss_dssp EECSSCBTTBCTTCEEEEEEECCTTCCCEEEEEEEESSSS----SCCEEEE--EEEEESCSSCCTTCCCEEEEEEE--EE
T ss_pred EEccccccccCCCcEEEEEecccCCCCCCeEEEEEECCCC----CCCcCCe--ecccCCCcccccCCCccccceEE--CC
Confidence 5544 78888776543221 12456788999987 9999863 222211 100 00111145422 35
Q ss_pred CCeEEEEEeeecC--Cee-EEEEEEeCCCCCcEEe
Q 005279 266 EGKWRIAIGSRIN--RTG-ITFVYDTKDFINYELL 297 (704)
Q Consensus 266 ~g~w~Mv~Gs~~~--~~G-~~llY~S~Dl~~W~~~ 297 (704)
+|+.+++.....+ ..| .+.+..|+|.++|...
T Consensus 163 ~G~l~v~~~d~~~~~~~~q~l~~~~S~DG~TWs~~ 197 (367)
T 2ydt_A 163 KEKLILYYSDQRDNATHSQKLVHQTTTDLKKWSKV 197 (367)
T ss_dssp TTEEEEEEEECCSTTTCSSEEEEEEESSSSSCCCC
T ss_pred CCcEEEEECCCCCCCCCCcEEEEEECCCCCCCCCc
Confidence 6776666654322 234 4556688999999753
|
| >1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A* | Back alignment and structure |
|---|
Probab=93.88 E-value=1.5 Score=49.32 Aligned_cols=164 Identities=19% Similarity=0.121 Sum_probs=89.9
Q ss_pred CCEEEEEEeeCCCCC-CCCCcEEEEEEeCCC-cceeecccccccCC-CCCCCcEEeeeEEEec-CCcEEEEEecccC---
Q 005279 141 KGWYHLFYQYNPNGA-IWGDIVWGHAVSKDL-IHWYHLPLAMVADQ-WYDIMGVWTGSATILP-DGKLMMLYTGSTN--- 213 (704)
Q Consensus 141 ~G~YHLFYQ~nP~~~-~wG~~~WGHAvS~DL-vhW~~lp~AL~Pd~-~yD~~Gv~SGSavv~~-dG~~~~~YTG~~~--- 213 (704)
+|....||.-.+... .+|.+......|+|. .+|.... .|..+. .-...++...+.++++ +|+++|+|.....
T Consensus 31 ~G~lla~~~~~~~~~~~~~~~~i~~~rS~DgG~TW~~~~-~l~~~~~~~~~~~~~~P~~~~d~~~g~i~l~~~~~~~~~~ 109 (601)
T 1w8o_A 31 DGDLLASYDGRPTGIGAPGPNSILQRRSTDGGRTWGEQQ-VVSAGQTTAPIKGFSDPSYLVDRETGTIFNFHVYSQRQGF 109 (601)
T ss_dssp TSCEEEEEEECTTSCSTTSCCEEEEEEESSTTSSCCCCE-EEECCBCSSSCBEEEEEEEEECTTTCCEEEEEEEESSCCT
T ss_pred CCCEEEEEcccCCCCCCCCcceEEEEEeCCCCCCCCCCE-EEecCccCCCCCccccceEEEECCCCeEEEEEEeecCCCc
Confidence 566677777666543 335667778889985 8998653 343322 1123456677777664 8999999974211
Q ss_pred ----------C-ceeeEEEEEeCCCCCCccceeEeeCCCceec---CCCCCCCcCccCCeeEEecC----CCeEEEEEee
Q 005279 214 ----------E-SVQVQNLAYPADPSDPLLIKWVKYPGNPVLV---PPPGIGAKDFRDPTTAWLTS----EGKWRIAIGS 275 (704)
Q Consensus 214 ----------~-~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~---~p~g~~~~~fRDP~Vvw~~~----~g~w~Mv~Gs 275 (704)
+ ......+.+|.|+| .+|.+.. .+. +.+++. ..|..|-....-. .|++++.+..
T Consensus 110 ~~~~~g~~~~~~~~~~~~~~~S~D~G----~TWs~~~---~~~~~~~~~~~~-~~~~~~g~gi~~~~~~~~G~l~~~~~~ 181 (601)
T 1w8o_A 110 AGSRPGTDPADPNVLHANVATSTDGG----LTWSHRT---ITADITPDPGWR-SRFAASGEGIQLRYGPHAGRLIQQYTI 181 (601)
T ss_dssp TTCCSCCCTTCTTSCEEEEEEESSTT----SSCEEEE---CGGGSCCSTTCC-EEEECSEECEECCSSTTTTCEEEEEEE
T ss_pred cccccCCCccCCceEEEEEEEecCCC----CCCCCcc---cccccccCCCee-EEEecCCeEEEccCCCcCceEEEEEEE
Confidence 0 11235788999986 8999853 121 112221 1233442111112 3776654432
Q ss_pred ecCC-eeEEEEEEeCC-CCCcEEecceeccCCCCCceeeeeeEEcC
Q 005279 276 RINR-TGITFVYDTKD-FINYELLRGVLHGVPNTGMWECVDFYPVS 319 (704)
Q Consensus 276 ~~~~-~G~~llY~S~D-l~~W~~~~~l~~~~~~~gmWECPdlf~l~ 319 (704)
.... .....++.|+| .++|+....+.. ++-|| .++++.
T Consensus 182 ~~g~~~~~~~~~~S~D~G~TW~~~~~~~~-----~~~~~-~v~~~~ 221 (601)
T 1w8o_A 182 INAAGAFQAVSVYSDDHGRTWRAGEAVGV-----GMDEN-KTVELS 221 (601)
T ss_dssp ECTTSCEEEEEEEESSTTSSCEECCCBCS-----SCCSE-EEEECT
T ss_pred cCCCCceeEEEEEECCCCcCccCCCCCCC-----CCCcC-EEEEeC
Confidence 2111 12344555665 899998654321 23454 566664
|
| >3lig_A Fructosyltransferase; five bladed beta-propeller fold, hydrolase; 1.80A {Aspergillus japonicus} PDB: 3ldk_A* 3lem_A* 3ldr_A 3lih_A* 3lf7_A 3lfi_A* | Back alignment and structure |
|---|
Probab=93.39 E-value=0.5 Score=54.56 Aligned_cols=159 Identities=18% Similarity=0.176 Sum_probs=91.4
Q ss_pred CCcccccccc----cceeecCCCCccCCCcceE------E--CCEEEEEEeeCCCCC-------CCCCcEEEEEEeCC-C
Q 005279 111 TNNMLSWQRT----AFHFQPQKNWMNDPNGPVF------Y--KGWYHLFYQYNPNGA-------IWGDIVWGHAVSKD-L 170 (704)
Q Consensus 111 ~~~~~~w~Rp----~~Hf~P~~gWmNDPNG~~y------~--~G~YHLFYQ~nP~~~-------~wG~~~WGHAvS~D-L 170 (704)
+..+++|.+. ..-+.|... .|.+| || . +|+++|||--+-..+ .-|...-.+|+|+| +
T Consensus 70 S~DLvhW~~~~~~~~~aL~P~~~--~D~~G-~~SGSav~~~~~g~~~~~YTg~~~~~~~~~~~~~~~~q~Q~lA~S~D~g 146 (634)
T 3lig_A 70 TANLATYTDTSDNGSFLIQPGGK--NDPVA-VFDGAVIPVGVNNTPTLLYTSVSFLPIHWSIPYTRGSETQSLAVARDGG 146 (634)
T ss_dssp ESSSSCCEESCSTTCEEECSCSS--SCSSE-EEEEEEESSCGGGSCEEEEEEECSCCCCTTSCCCTTSEEEEEEEEEGGG
T ss_pred ecCcCceeECcCCCCceecCCCC--CCCCC-cEeeEEEEECCCCEEEEEEEecccccccccCcCCCCcEEEEEEEECCCC
Confidence 5568889765 567777663 48888 44 2 589999998652211 12446678999998 6
Q ss_pred cceeecc--cccc-cCCCCCCCcEEeeeEEEe-----------------------------cCCcEEEEEecccCCceee
Q 005279 171 IHWYHLP--LAMV-ADQWYDIMGVWTGSATIL-----------------------------PDGKLMMLYTGSTNESVQV 218 (704)
Q Consensus 171 vhW~~lp--~AL~-Pd~~yD~~Gv~SGSavv~-----------------------------~dG~~~~~YTG~~~~~~q~ 218 (704)
++|+..+ +.|. |...|+..+.=..-+... .+|+++|+--+..++....
T Consensus 147 ~~w~K~~~nPVi~~~p~g~~~~~fRDPkV~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ymvlg~~~~~~~g~ 226 (634)
T 3lig_A 147 RRFDKLDQGPVIADHPFAVDVTAFRAPFVFRSARLDVLLSLDEEVARNETAVQQAVDGWTEKNAPWYVAVSGGVHGVGPA 226 (634)
T ss_dssp TEEEECSSSCSBCSSSTTCCEEEEEEEEEECCHHHHHHHHSCTTTTTSHHHHHHHHHTCCGGGCCCEEEEEEEETTTEEE
T ss_pred CEEEECCCCceEcCCCcccCCCccCCCeEccccCccccccccccccccccccccccccccCCCCeEEEEEEEecCCCCCE
Confidence 8999874 4443 222233333344554321 4688888876655443333
Q ss_pred EEEEE--eCCCCCCccceeEeeCCCceecCCCCC-----------CCcCccCCeeEEec-C-----CCeEEEEEeee
Q 005279 219 QNLAY--PADPSDPLLIKWVKYPGNPVLVPPPGI-----------GAKDFRDPTTAWLT-S-----EGKWRIAIGSR 276 (704)
Q Consensus 219 q~lA~--S~D~~D~~l~~W~K~~~nPVl~~p~g~-----------~~~~fRDP~Vvw~~-~-----~g~w~Mv~Gs~ 276 (704)
+.|=. |.|. -.|.+|+-. +++...+.+. ....|-.|-.+--. + +++|+|+++..
T Consensus 227 v~lY~~~s~dd--~~l~~W~~~--g~l~~~~~~~~~g~~~~~~~~~G~~wECPdlf~l~~~g~~~~~~~~vl~~~~~ 299 (634)
T 3lig_A 227 QFLYRQNGGNA--SEFQYWEYL--GEWWQEATNSSWGDEGTWAGRWGFNFETGNVLFLTEEGHDPQTGEVFVTLGTE 299 (634)
T ss_dssp EEEEEEGGGCT--TCCSCEEEE--EEEEECCTTCCSSSSSCSSCCCCSEEEEEEEEEECSSSBCTTTSEEEEEEEEE
T ss_pred EEEEEeCCCCc--cccCCceEe--cccccccccccccccccccCceeeEEECCCEEEECCcccCCCCCcEEEEECCC
Confidence 33323 3441 236899875 5666532210 01234556632212 2 36899999875
|
| >2bf6_A Sialidase, EXO-alpha-sialidase; sialic acid, hydrolase; HET: SIA; 0.97A {Clostridium perfringens} PDB: 2vk5_A 2vk6_A* 2vk7_A* | Back alignment and structure |
|---|
Probab=92.53 E-value=0.97 Score=49.60 Aligned_cols=124 Identities=14% Similarity=0.244 Sum_probs=67.5
Q ss_pred EEEEEeCC-CcceeecccccccC--CCCC-CCcEEeeeEEEecC----CcEEE-EEecccCCceeeEEEEEeCCCCCCcc
Q 005279 162 WGHAVSKD-LIHWYHLPLAMVAD--QWYD-IMGVWTGSATILPD----GKLMM-LYTGSTNESVQVQNLAYPADPSDPLL 232 (704)
Q Consensus 162 WGHAvS~D-LvhW~~lp~AL~Pd--~~yD-~~Gv~SGSavv~~d----G~~~~-~YTG~~~~~~q~q~lA~S~D~~D~~l 232 (704)
.....|+| ..+|.. |..|.+. ..+. -.+.-.|+.+...+ |++++ .|.... .......+.+|.|.+
T Consensus 189 ~~~~~S~D~G~TWs~-p~~l~~~~~~~~~~~~~~~~g~Gi~l~~g~~~Grlv~p~~~~~~-~g~~~~~v~~S~D~G---- 262 (449)
T 2bf6_A 189 INLVYSDDDGKTWSE-PQNINFQVKKDWMKFLGIAPGRGIQIKNGEHKGRIVVPVYYTNE-KGKQSSAVIYSDDSG---- 262 (449)
T ss_dssp EEEEEESSTTSSCCC-CEECHHHHCCTTCSCEEECSEECEECCSSTTTTCEEEEEEEECT-TCCEEEEEEEESSTT----
T ss_pred EEEEEEcCCCccCCC-CccCccccccccceeecccCCeEEEeccCCcCCEEEEEEEEEcC-CCCEEEEEEEECCCC----
Confidence 34567877 699986 2223221 1111 01222344444454 78776 443322 222445688999976
Q ss_pred ceeEeeCCCceecC---CCC-------C--CCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCC-CCCcEEe
Q 005279 233 IKWVKYPGNPVLVP---PPG-------I--GAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKD-FINYELL 297 (704)
Q Consensus 233 ~~W~K~~~nPVl~~---p~g-------~--~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~S~D-l~~W~~~ 297 (704)
.+|+... ++... +.| + ...+..+|.++- -++|+.+|+.... .|.+.+|+|.| ..+|+..
T Consensus 263 ~tW~~~~--~~~~~~~~~~G~~~~~~~~~~g~~~~~e~~vve-~~dG~l~~~~R~~---~g~~~v~~S~D~G~TWs~~ 334 (449)
T 2bf6_A 263 KNWTIGE--SPNDNRKLENGKIINSKTLSDDAPQLTECQVVE-MPNGQLKLFMRNL---SGYLNIATSFDGGATWDET 334 (449)
T ss_dssp SSCEECC--CTTTTEECTTSCEECTTTCCCSTTCEEEEEEEE-CTTSCEEEEEEES---SSEEEEEEESSTTSCCCSC
T ss_pred CceeECC--ccCcccccccccccccccccccCCCCCCCEEEE-ecCCEEEEEEEeC---CCCEEEEEECCCCccccCc
Confidence 8999853 21110 001 0 012345677552 3578888876543 36678899977 6899853
|
| >2xzi_A KDNAse, extracellular sialidase/neuraminidase, putative; hydrolase; HET: KDM; 1.45A {Aspergillus fumigatus} PDB: 2xcy_A* 2xzj_A* 2xzk_A* | Back alignment and structure |
|---|
Probab=92.34 E-value=0.45 Score=51.19 Aligned_cols=138 Identities=17% Similarity=0.195 Sum_probs=77.5
Q ss_pred ccCCCcceEE-CCEEEEEEeeCCCC-----C--------------CC-CCcEEEEEEeCC-CcceeecccccccC---CC
Q 005279 131 MNDPNGPVFY-KGWYHLFYQYNPNG-----A--------------IW-GDIVWGHAVSKD-LIHWYHLPLAMVAD---QW 185 (704)
Q Consensus 131 mNDPNG~~y~-~G~YHLFYQ~nP~~-----~--------------~w-G~~~WGHAvS~D-LvhW~~lp~AL~Pd---~~ 185 (704)
..+|. ++.. +|.-+|||-+++.. . .| ........+|+| .++|.. |..|.+. ..
T Consensus 102 ~~~Pt-~v~~~~g~I~l~~~~~~g~y~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~S~D~G~TWs~-p~~l~~~~~~~~ 179 (386)
T 2xzi_A 102 WGNPT-PVVDDDNTIYLFLSWNGATYSQNGKDVLPDGTVTKKIDSTWEGRRHLYLTESRDDGNTWSK-PVDLTKELTPDG 179 (386)
T ss_dssp EEEEE-EEECTTSCEEEEEEEECTTEESSSCCBCTTSCBCEECCSSTTTSCEEEEEEESSTTSCCCC-CEECHHHHSCTT
T ss_pred ccccE-EEEeCCCCEEEEEEeccccccccCcceeccCceecccccccccccEEEEEEECCCCccCCC-cccCcccccccc
Confidence 34564 5555 68888988654321 0 11 123345677887 799985 2223211 11
Q ss_pred CCCCcEEeeeEEEecCCcEEEEEecccCCceeeEEEEEeCC--CCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEe
Q 005279 186 YDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPAD--PSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWL 263 (704)
Q Consensus 186 yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D--~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~ 263 (704)
+.....-.|+.+...||++++-.- ..+.+|.| +| .+|+.... + +. -.+|.++-
T Consensus 180 ~~~~~~~~g~gI~l~dGrLv~p~~---------~~~~~S~D~~~G----~tW~~~~~--~---~~------~~e~~vve- 234 (386)
T 2xzi_A 180 WAWDAVGPGNGIRLTTGELVIPAM---------GRNIIGRGAPGN----RTWSVQRL--S---GA------GAEGTIVQ- 234 (386)
T ss_dssp CCSCCBCSSCCEECTTSCEEEEET---------TEEEEEESSTTS----CEEEEEEC--T---TC------CSSEEEEE-
T ss_pred ceeeccCCccEEEecCCEEEEEeE---------EEEEEccCCCCC----CcccccCc--C---CC------CCcCEEEE-
Confidence 111111124555677999876442 23567888 65 89987532 1 11 14777552
Q ss_pred cCCCeEEEEEeeecCCeeEEEEEEeCCCCCcEEec
Q 005279 264 TSEGKWRIAIGSRINRTGITFVYDTKDFINYELLR 298 (704)
Q Consensus 264 ~~~g~w~Mv~Gs~~~~~G~~llY~S~Dl~~W~~~~ 298 (704)
-++|+.+|+.... ..+...+|+|.| .+|+...
T Consensus 235 ~~dG~L~~~~r~~--~g~~r~v~~S~D-~tWt~~~ 266 (386)
T 2xzi_A 235 TPDGKLYRNDRPS--QKGYRMVARGTL-EGFGAFA 266 (386)
T ss_dssp CTTSCEEEEECCS--SSEEEEEEEEET-TEECCCE
T ss_pred eCCCcEEEEEeCC--CCccEEEEEEeC-CccCccc
Confidence 2578877765432 222467899999 9998643
|
| >3sc7_X Inulinase; glycoside hydrolase family 32, glycosylation cytosol, hydrolase; HET: MAN NAG EPE; 1.50A {Aspergillus ficuum} PDB: 3rwk_X* | Back alignment and structure |
|---|
Probab=92.31 E-value=0.94 Score=51.08 Aligned_cols=121 Identities=15% Similarity=0.188 Sum_probs=72.3
Q ss_pred EEEEEEeeCCCCCCCCCcEEEEEEeCCC-cceeecc--cccccCC--CCCCC---cEEeeeEEEe-cCCcEEEEEecccC
Q 005279 143 WYHLFYQYNPNGAIWGDIVWGHAVSKDL-IHWYHLP--LAMVADQ--WYDIM---GVWTGSATIL-PDGKLMMLYTGSTN 213 (704)
Q Consensus 143 ~YHLFYQ~nP~~~~wG~~~WGHAvS~DL-vhW~~lp--~AL~Pd~--~yD~~---Gv~SGSavv~-~dG~~~~~YTG~~~ 213 (704)
.+++||--+... .+...-++|+|+|. .+|+..+ +.|.+.. ..+.. ..=...+... ++|+++|++.....
T Consensus 120 ~l~l~YTg~~~~--~~~q~q~lA~s~D~g~~w~k~~~nPVi~~~~~~~~~~~~~~~fRDPkV~~~~~~g~w~mv~g~~~~ 197 (516)
T 3sc7_X 120 PYLAWFTGYTTS--SQTQDQRLAFSVDNGATWTKFQGNPIISTSQEAPHDITGGLESRDPKVFFHRQSGNWIMVLAHGGQ 197 (516)
T ss_dssp CEEEEEEEEETT--TTEEEEEEEEESSTTSCCEECTTCCSBCHHHHTTTCTTSSSSCEEEEEEEETTTTEEEEEEECBTT
T ss_pred eEEEEEeeeeCC--CCceEEEEEEecCCCceEEEcCCCceEcCCCcccccccCCCcccCCeEEEECCCCeEEEEEEECCC
Confidence 599999876432 13456789999995 8999864 3443321 11111 2345666543 46889998854221
Q ss_pred CceeeEEEEEeCCCCCCccceeEeeCCCceecCC-CCC--CCcCccCCeeEEe-c----CCCeEEEEEeee
Q 005279 214 ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPP-PGI--GAKDFRDPTTAWL-T----SEGKWRIAIGSR 276 (704)
Q Consensus 214 ~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p-~g~--~~~~fRDP~Vvw~-~----~~g~w~Mv~Gs~ 276 (704)
....+..|.| |++|+.. .++.... .|+ ...-|-.|- ++. . .+++|+|+++.+
T Consensus 198 ---~~i~ly~S~D-----L~~W~~~--~~l~~~~~~g~~~~~~mwECPd-lf~l~~~g~~~~k~VL~~s~~ 257 (516)
T 3sc7_X 198 ---DKLSFWTSAD-----TINWTWQ--SDLKSTSINGLSSDITGWEVPD-MFELPVEGTEETTWVVMMTPA 257 (516)
T ss_dssp ---CEEEEEEESS-----SSSCEEE--EEEEGGGSTTCCTTCCCBCCCE-EEEEECSSSSCEEEEEEECCS
T ss_pred ---CEEEEEECCC-----CCCceEc--ccccccCCCCcccccceEECCc-EEEecccCCCCceEEEEECCC
Confidence 2467788887 5899986 4454421 121 112467787 443 1 135899998764
|
| >4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis} | Back alignment and structure |
|---|
Probab=92.18 E-value=1.7 Score=49.10 Aligned_cols=164 Identities=14% Similarity=0.081 Sum_probs=90.1
Q ss_pred CCEEEEEEeeCCCCC-CC-CCcEEEEEEeCCC-cceeecccccccCCCC-----CCCcEEeeeEEEec-CCcEEEEEecc
Q 005279 141 KGWYHLFYQYNPNGA-IW-GDIVWGHAVSKDL-IHWYHLPLAMVADQWY-----DIMGVWTGSATILP-DGKLMMLYTGS 211 (704)
Q Consensus 141 ~G~YHLFYQ~nP~~~-~w-G~~~WGHAvS~DL-vhW~~lp~AL~Pd~~y-----D~~Gv~SGSavv~~-dG~~~~~YTG~ 211 (704)
+|....||-..+.+. .+ +++......|+|. .+|...-. +.....+ ..++++.++.++++ +|++++||+..
T Consensus 191 ~G~Lla~~~~r~~~~~D~~~~i~i~~~rS~DgG~tWs~~~~-v~~~~~~~~~~~~~~~~~nP~lvvD~~tG~I~L~~~~~ 269 (523)
T 4fj6_A 191 NGTLLGVYDIRYNSSVDLQEKIDIGVSRSTDKGQTWEPMRV-AMTFKQTDGLPHGQNGVGDPSILVDEKTNTIWVVAAWT 269 (523)
T ss_dssp TSCEEEEEEEESSCSCCSSSSEEEEEEEESSTTSSCCCCEE-EECCTTGGGCCGGGSCEEEEEEEECTTTCCEEEEEEEC
T ss_pred CCcEEEEEeceeccCCCCcCcEEEEEEEeCCCCCEeCCcEE-eecccccccCccccccccCceEEEECCCCeEEEEEEec
Confidence 677777776554333 22 5677778889884 79985432 3222211 24689999998876 79999998742
Q ss_pred cC----------------CceeeEEEEEeCCCCCCccceeEeeCCCceec--CCCCCCCcCccCCe-eEEecCCCeEEEE
Q 005279 212 TN----------------ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLV--PPPGIGAKDFRDPT-TAWLTSEGKWRIA 272 (704)
Q Consensus 212 ~~----------------~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~--~p~g~~~~~fRDP~-Vvw~~~~g~w~Mv 272 (704)
.. ......++.+|+|+| ++|.+.. .+.. ..+.+. .-+.-|- .+- -++|++++-
T Consensus 270 ~g~~~~~~w~~~~~g~~~~~t~~~~~~~S~D~G----~TWs~p~--~l~~~~~~~~~~-~~~~g~G~GI~-l~dGrLv~P 341 (523)
T 4fj6_A 270 HGMGNERAWWNSMPGMTPDETAQLMLVKSEDDG----KTWSEPI--NITSQVKDPSWY-FLLQGPGRGIT-MQDGTLVFP 341 (523)
T ss_dssp CSCTTSCGGGTCCSSSSTTTSCEEEEEEESSTT----SSCCCCE--ECHHHHCCTTCS-EEEECSEECEE-CTTSCEEEE
T ss_pred ccccccccccccccCCCCCcceEEEEEEcCCCC----ccCCCCe--eecccccCCcce-EEecCCCcceE-EeCCeEEEE
Confidence 10 012345788999986 8997631 1111 111110 1111221 011 357887755
Q ss_pred Eeeec-CCe-eEEEEEEeCCCCCcEEecceeccCCCCCceeeeeeEEcC
Q 005279 273 IGSRI-NRT-GITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVS 319 (704)
Q Consensus 273 ~Gs~~-~~~-G~~llY~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~ 319 (704)
+-... ++. -..++|+.++.++|+....... +.-| |.+.++.
T Consensus 342 ~~~~~~~g~~~s~i~~S~D~G~TW~~~~~~~~-----~~~e-~~vve~~ 384 (523)
T 4fj6_A 342 IQFIDATRVPNAGIMYSKDRGKTWHLHNLART-----NTTE-AQVAEVE 384 (523)
T ss_dssp EEEECTTSCEEEEEEEESSTTSSCEECCCSEE-----TEEE-EEEEEEE
T ss_pred EEEEcCCCCEEEEEEEECCCCCeEEECCCCCc-----cccC-CEEEEec
Confidence 44332 222 2344555555899998654321 2333 4566664
|
| >3vss_A Beta-fructofuranosidase; glycoside hydrolase family 68, beta-propeller, hydrolase; HET: FRU; 1.97A {Arthrobacter} PDB: 3vsr_A* | Back alignment and structure |
|---|
Probab=92.00 E-value=1.4 Score=49.54 Aligned_cols=130 Identities=18% Similarity=0.178 Sum_probs=77.6
Q ss_pred EECCEEEEEEeeCC---C--CCCCC--CcEEEEEE-----eCCCccee---ecccccccCC-CCCC---Cc---EEeeeE
Q 005279 139 FYKGWYHLFYQYNP---N--GAIWG--DIVWGHAV-----SKDLIHWY---HLPLAMVADQ-WYDI---MG---VWTGSA 196 (704)
Q Consensus 139 y~~G~YHLFYQ~nP---~--~~~wG--~~~WGHAv-----S~DLvhW~---~lp~AL~Pd~-~yD~---~G---v~SGSa 196 (704)
..+|+++|||.-.- . +.... ....++|+ |.|.++|+ ..++.+.||. +|+. .. .=..-+
T Consensus 170 ~~DG~i~LFYT~v~~~~~~~g~~~~~~~Q~ia~A~~~i~~d~dgv~~~~~~~~~~l~~~DG~~Yqt~~q~~~~~fRDP~v 249 (496)
T 3vss_A 170 SKNGEIKLFFTDVAFYRNSDGTNIKPYDPRIALSVGKVKANKKGVTLTGFNKVTDLLQADGTYYQTGAQNEFFNFRDPFT 249 (496)
T ss_dssp CTTCEEEEEEEEEEECBCTTSCBSSCCEEEEEEEEEEEEEETTEEEEEEEEEEEEEECCCSSSBCCTTTCTTCCCEEEEE
T ss_pred CCCCeEEEEEEEeecccCCCccccccceeEEEEEeeeeeecCCcceEeccCCCcccccCChhhhhccccccccccCCCee
Confidence 46899999997431 1 11111 23456655 67777655 4456677775 3321 11 224555
Q ss_pred EEe--cCCcEEEEEecccCC----------------------------------ceeeEEEEEeCCCCCCccceeEeeCC
Q 005279 197 TIL--PDGKLMMLYTGSTNE----------------------------------SVQVQNLAYPADPSDPLLIKWVKYPG 240 (704)
Q Consensus 197 vv~--~dG~~~~~YTG~~~~----------------------------------~~q~q~lA~S~D~~D~~l~~W~K~~~ 240 (704)
+.+ .+|..+|++.|++.. ..-.++||..++. .+..|+-+
T Consensus 250 f~DP~~dG~~YLVFEgnT~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~anG~IGLa~~~s~---D~~~We~~-- 324 (496)
T 3vss_A 250 FEDPAHPGETFMVFEGNSAMQRETATCNEADLGYRQGDPYAETVDDVNASGATYQIGNVGLAKAKNK---QLTEWEFL-- 324 (496)
T ss_dssp ECCTTSTTCCEEEEEEEBSSCGGGCCCCHHHHCCCTTCTTCCCHHHHHHHTGGGCEEEEEEEEESST---TSCCEEEE--
T ss_pred EecCCCCCcEEEEEecccCCcCccccccccccccccccccccccccccccccccccceEEEEEccCC---CCCccEEe--
Confidence 444 378899999887631 0234567766542 25889876
Q ss_pred CceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec
Q 005279 241 NPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI 277 (704)
Q Consensus 241 nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~ 277 (704)
.|++..... ...+--|.+| +.+|+||++..++.
T Consensus 325 ~PL~~a~~v--~deiErP~vf--~~dGKyYLFt~s~~ 357 (496)
T 3vss_A 325 PPILSANCV--TDQTERPQIY--FKDGKSYLFTISHR 357 (496)
T ss_dssp EEEEEEETT--BSCCEEEEEE--EETTEEEEEEEECS
T ss_pred CccccCCCC--CCceeCCcEE--EECCEEEEEEeccc
Confidence 588764322 2345569954 46999999987753
|
| >1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ... | Back alignment and structure |
|---|
Probab=91.72 E-value=1.4 Score=51.00 Aligned_cols=149 Identities=18% Similarity=0.228 Sum_probs=82.2
Q ss_pred CccCCCcceEECCEEEEEE-eeCCCCC----CCCCcEEEEE-------EeCC-C-----cceeecccccccCC--CCCC-
Q 005279 130 WMNDPNGPVFYKGWYHLFY-QYNPNGA----IWGDIVWGHA-------VSKD-L-----IHWYHLPLAMVADQ--WYDI- 188 (704)
Q Consensus 130 WmNDPNG~~y~~G~YHLFY-Q~nP~~~----~wG~~~WGHA-------vS~D-L-----vhW~~lp~AL~Pd~--~yD~- 188 (704)
-..||. ++..+|.-+||+ .|+.... .++...|+.. .|+| . |+|.+ |..|.+.- .+..
T Consensus 107 ~v~~PT-tVv~gg~I~LL~g~y~~~~~~~~~~~~~~~~~llLVkG~V~~S~D~Gktsk~ItWs~-p~~L~~~~~~~~~~~ 184 (648)
T 1ms9_A 107 RVVDPT-VIVKGNKLYVLVGSYNSSRSYWTSHGDARDWDILLAVGEVTKSTAGGKITASIKWGS-PVSLKEFFPAEMEGM 184 (648)
T ss_dssp EEEEEE-EEEETTEEEEEEEEESSCCSCGGGCSSSTTEEEEEEEEEEEEECGGGSCEEEEEECC-CEECGGGCCSBSSSS
T ss_pred Eeeccc-eeeecccEEEEEEeecCCcccccccccCCCcceEEEEeeeccccccccccceeeccC-cccCccccccccccc
Confidence 345786 556788888887 5554322 1233356642 3665 2 57975 33333221 1111
Q ss_pred --CcEE--eeeEEEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeE-Ee
Q 005279 189 --MGVW--TGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTA-WL 263 (704)
Q Consensus 189 --~Gv~--SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vv-w~ 263 (704)
.+.. -|+.++..||++++=.-+........-.+-||+|.+ .+|+... ++ + .....||.|+ |
T Consensus 185 ~~~~~~~GgGsGI~m~dGtLVfPv~~~~~~g~~~s~iiySdD~G----~TW~ls~--~~--~-----~~gc~EpsVvEw- 250 (648)
T 1ms9_A 185 HTNQFLGGAGVAIVASNGNLVYPVQVTNKKKQVFSKIFYSEDEG----KTWKFGK--GR--S-----AFGCSEPVALEW- 250 (648)
T ss_dssp BEEEEEECSEECEECTTSCEEEEEEEEETTCCEEEEEEEESSTT----SSCEECS--CC--C-----CTTEEEEEEEEE-
T ss_pred eeEEEEecCCceEEecCCcEEEEEEEEcccccceeeEEEecCCC----CCEEECC--CC--C-----CCCccceEEEEE-
Confidence 1111 355567889998752212122222344567898875 8998853 21 1 1346899976 5
Q ss_pred cCCCeEEEEEeeecCCeeEEEEEEeCC-CCCcEEecc
Q 005279 264 TSEGKWRIAIGSRINRTGITFVYDTKD-FINYELLRG 299 (704)
Q Consensus 264 ~~~g~w~Mv~Gs~~~~~G~~llY~S~D-l~~W~~~~~ 299 (704)
+|+-+|..... .|...+|+|.| ...|+....
T Consensus 251 --dG~Lmm~~R~~---~g~R~Vy~S~D~G~TWte~~~ 282 (648)
T 1ms9_A 251 --EGKLIINTRVD---YRRRLVYESSDMGNTWLEAVG 282 (648)
T ss_dssp --TTEEEEEEEET---TSCCCEEEESSTTSSCEECTT
T ss_pred --CCEEEEEEEcc---CCcEEEEEecCCCcccccccc
Confidence 58854444332 24455788987 689997544
|
| >3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A* | Back alignment and structure |
|---|
Probab=91.10 E-value=2.1 Score=48.09 Aligned_cols=108 Identities=8% Similarity=0.027 Sum_probs=63.8
Q ss_pred CCcEEEEEecccCC---c-eeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEec------------
Q 005279 201 DGKLMMLYTGSTNE---S-VQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLT------------ 264 (704)
Q Consensus 201 dG~~~~~YTG~~~~---~-~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~------------ 264 (704)
+|+++|||.-+-.. + ...-++|+|+| |+||+.. .++|.|.. +....-...++-..
T Consensus 34 ~G~YHlFYQ~nP~~~~wg~~~~WGHa~S~D-----LvhW~~~--~~aL~P~~--d~~G~~SGSav~d~~~t~g~~~~~~~ 104 (509)
T 3kf3_A 34 AKLWHLYFQYNPNATAWGQPLYWGHATSND-----LVHWDEH--EIAIGPEH--DNEGIFSGSIVVDHNNTSGFFNSSID 104 (509)
T ss_dssp TTEEEEEEEEETTCSSCCSSBEEEEEEESS-----SSSCEEC--SCCBCCSS--TTCEEEEEEEEECTTCTTSCCCTTSC
T ss_pred CCEEEEEEecCCCCCCCCCcCEEEEEEccC-----CCCcEEC--cccccccc--cCCCEEeceEEEeCCccccccccccC
Confidence 69999999754221 1 24568999999 5999986 36665432 11222233332211
Q ss_pred CCCeEEEEEeeecCCeeEEEEEEeCC-CCCcEEec--ceeccCCCCCceeeeeeEEcC
Q 005279 265 SEGKWRIAIGSRINRTGITFVYDTKD-FINYELLR--GVLHGVPNTGMWECVDFYPVS 319 (704)
Q Consensus 265 ~~g~w~Mv~Gs~~~~~G~~llY~S~D-l~~W~~~~--~l~~~~~~~gmWECPdlf~l~ 319 (704)
++++++|++.+.....-...+..|+| +.+|+... +++.. ...-+.-|-.|.-.
T Consensus 105 p~~~l~~~YTg~~~~~q~q~lA~S~D~g~~~~k~~~nPVi~~--~~~~fRDPkVfw~~ 160 (509)
T 3kf3_A 105 PNQRIVAIYTNNIPDNQTQDIAFSLDGGYTFTKYENNPVIDV--SSNQFRDPKVFWHE 160 (509)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEESSSSSSCEECTTCCSBCC--SCSSCEEEEEEEET
T ss_pred CCCceEEEECCCCCCCeeEEEEEECCCCcceEEcCCCceEcC--CCCcccCCeEEEEC
Confidence 23578888876433333445667888 78999853 44431 22357778777554
|
| >2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A* | Back alignment and structure |
|---|
Probab=89.52 E-value=3.2 Score=48.24 Aligned_cols=117 Identities=14% Similarity=0.132 Sum_probs=67.6
Q ss_pred EEEEEeCC-CcceeecccccccCCCCCCCcEEe--eeEEEecC----CcEEE-EEecccCCceeeEEEEEeCCCCCCccc
Q 005279 162 WGHAVSKD-LIHWYHLPLAMVADQWYDIMGVWT--GSATILPD----GKLMM-LYTGSTNESVQVQNLAYPADPSDPLLI 233 (704)
Q Consensus 162 WGHAvS~D-LvhW~~lp~AL~Pd~~yD~~Gv~S--GSavv~~d----G~~~~-~YTG~~~~~~q~q~lA~S~D~~D~~l~ 233 (704)
+-...|+| ..+|.... .|.+...-.....+. |+.+...+ |++++ .|+... ..-.+.+|.|+| .
T Consensus 428 i~v~~S~DgG~TWs~p~-~l~~~~~~~~~~~~~gpG~gI~l~d~~~~GrLv~p~~~~~~----~~s~i~~SdDgG----~ 498 (679)
T 2sli_A 428 LAMRYSDDEGASWSDLD-IVSSFKPEVSKFLVVGPGIGKQISTGENAGRLLVPLYSKSS----AELGFMYSDDHG----D 498 (679)
T ss_dssp EEEEEESSTTSSCCCCE-ECGGGCCTTCSEEEECSEECEECCSSTTTTCEEEEEEEESS----CSEEEEEESSTT----S
T ss_pred EEEEEeCCCCccCCCCc-ccCcccCccccceecCCCceEEecCCCCCCEEEEEEEecCC----CEEEEEEECCCC----C
Confidence 34556887 69998642 333211001112222 34455555 88776 444321 234577999986 8
Q ss_pred eeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCC-CCCcEEec
Q 005279 234 KWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKD-FINYELLR 298 (704)
Q Consensus 234 ~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~S~D-l~~W~~~~ 298 (704)
+|++... + .|.+ ....+|.++ ...+|+.+|+.... .|...+|+|.| ...|+...
T Consensus 499 TW~~~~~--~--~p~~---~~~~e~~vv-e~~dG~L~~~~R~~---~G~~~v~~S~DgG~TWt~~~ 553 (679)
T 2sli_A 499 NWTYVEA--D--NLTG---GATAEAQIV-EMPDGSLKTYLRTG---SNCIAEVTSIDGGETWSDRV 553 (679)
T ss_dssp SCEEEEC--C--CCCS---CCCCCEEEE-ECTTSCEEEEECCS---SSSCEEEEESSTTSSCCCCE
T ss_pred ceEeCcc--C--CCCC---CCccceEEE-EeCCCEEEEEEEeC---CCCEEEEEEcCCCcCCCCCc
Confidence 9998632 1 1212 345788854 34678888876543 35667899988 68998754
|
| >4azz_A Levanase; hydrolase; 1.70A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=88.58 E-value=0.078 Score=50.49 Aligned_cols=39 Identities=8% Similarity=0.050 Sum_probs=31.6
Q ss_pred EEEEEEEeCCeEEEEEeCCeeEEEEeeecCcccCCccEEEEE
Q 005279 595 VYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLF 636 (704)
Q Consensus 595 l~LrI~VD~SivEvF~n~Gr~v~TsRvYP~~~~~~~~~v~lf 636 (704)
.+|||.++.+.|++|+| |+.+++.+.+.-.. +..+|...
T Consensus 113 ~~l~I~~~G~~i~~~vn-G~~v~~~~D~~~~~--G~iGl~~~ 151 (172)
T 4azz_A 113 YHLKTEAEGDRFKIYLD-DRLVIDAHDSVFSE--GQFGLNVW 151 (172)
Confidence 79999999999999999 68899999876443 55666554
|
| >2w20_A Sialidase A; secreted, cell WALL, hydrolase, glycosidase, neuraminidase, peptidoglycan-anchor; HET: MES; 1.49A {Streptococcus pneumoniae} PDB: 2vvz_A* 3h71_A 3h72_A* 3h73_A* 2ya8_A* 2ya5_A* 2ya6_A* 2ya7_A* 2ya4_A* | Back alignment and structure |
|---|
Probab=88.90 E-value=1.4 Score=48.81 Aligned_cols=124 Identities=20% Similarity=0.268 Sum_probs=68.5
Q ss_pred EEEEeCC-CcceeecccccccCC--CCCCC-cEEeeeEEEecC----CcEEE-EEecccC---CceeeEEEEEeCCCCCC
Q 005279 163 GHAVSKD-LIHWYHLPLAMVADQ--WYDIM-GVWTGSATILPD----GKLMM-LYTGSTN---ESVQVQNLAYPADPSDP 230 (704)
Q Consensus 163 GHAvS~D-LvhW~~lp~AL~Pd~--~yD~~-Gv~SGSavv~~d----G~~~~-~YTG~~~---~~~q~q~lA~S~D~~D~ 230 (704)
-...|+| ..+|.. |..|.+.. .+... +.-.|+.++..+ |++++ +|+.... .+.....+.+|.|.|
T Consensus 217 ~~~~S~D~G~TWs~-p~~l~~~~~~~~~~f~~~gpg~gI~l~d~~~~GrLv~p~~~~~~~~~~~g~~~~~v~~SdD~G-- 293 (471)
T 2w20_A 217 WMSYSDDDGKTWSA-PQDITPMVKADWMKFLGVGPGTGIVLRNGPHKGRILIPVYTTNNVSHLNGSQSSRIIYSDDHG-- 293 (471)
T ss_dssp EEEEESSTTSSCCC-CEECHHHHCCTTCSCEEECCEECEECCSSTTTTCEEEEEEECCTTTHHHHCCEEEEEEESSTT--
T ss_pred EEEEECCCcCcCCC-CcccCcccccccccccccCCcceEEecCCCcCCeEEEEEEEeccccCCCCcEEEEEEEECCCC--
Confidence 3567888 799986 43343321 11110 111234455556 88876 5553211 122456688999976
Q ss_pred ccceeEeeCCCceecCC--CCC-------C--CcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCC-CCCcEEe
Q 005279 231 LLIKWVKYPGNPVLVPP--PGI-------G--AKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKD-FINYELL 297 (704)
Q Consensus 231 ~l~~W~K~~~nPVl~~p--~g~-------~--~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~S~D-l~~W~~~ 297 (704)
.+|+... ++-... .+. . .....+|.++ .-++|+.+|+... ..|.+.+|+|.| ...|+..
T Consensus 294 --~TW~~~~--~v~~~~~~~g~~~~~~~~~~~~~~~~ep~vv-e~~dG~L~~~~R~---~~G~~~v~~S~DgG~TWs~~ 364 (471)
T 2w20_A 294 --KTWHAGE--AVNDNRQVDGQKIHSSTMNNRRAQNTESTVV-QLNNGDVKLFMRG---LTGDLQVATSKDGGVTWEKD 364 (471)
T ss_dssp --SSCEECC--CTTTTEEETTEEECTTTCCCGGGCCCSEEEE-ECTTSCEEEEECC---SSSEEEEEEESSSSSSCCSC
T ss_pred --CCcccCC--ccCcccccCccccccccccccCcCccCCEEE-EcCCCeEEEEEEe---CCCCEEEEEEcCCCcCCCCc
Confidence 8999853 221110 110 0 0124688854 3367888777643 246677899977 6899864
|
| >3sil_A Sialidase; glycosidase, hydrolase; HET: PO4 GOL; 1.05A {Salmonella typhimurium} SCOP: b.68.1.1 PDB: 1dim_A* 1dil_A* 2sil_A 2sim_A* | Back alignment and structure |
|---|
Probab=88.12 E-value=3.3 Score=44.73 Aligned_cols=144 Identities=22% Similarity=0.285 Sum_probs=79.1
Q ss_pred ccCCCcceEE-CC--EEEEEEe-eCCCCCCCC-------CcEE--EEEEeCC-Ccceeecccccc------cCCCCCCCc
Q 005279 131 MNDPNGPVFY-KG--WYHLFYQ-YNPNGAIWG-------DIVW--GHAVSKD-LIHWYHLPLAMV------ADQWYDIMG 190 (704)
Q Consensus 131 mNDPNG~~y~-~G--~YHLFYQ-~nP~~~~wG-------~~~W--GHAvS~D-LvhW~~lp~AL~------Pd~~yD~~G 190 (704)
..||.-++-. .| .-+||+. |+-....|. .-.| -..+|+| .++|.+. .... +..+ .+
T Consensus 95 v~~Pt~vv~~~tG~~~I~llvg~~~~~~~~~~~~~~~~~~~~~~l~lv~S~D~G~tWs~~-~~~~~~~~~~~~~~---~~ 170 (379)
T 3sil_A 95 VMDPTCIVANIQGRETILVMVGKWNNNDKTWGAYRDKAPDTDWDLVLYKSTDDGVTFSKV-ETNIHDIVTKNGTI---SA 170 (379)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEESSCCSCGGGCCSSSSCTTCEEEEEEESSTTSCCEEE-CCSHHHHHHHHCSE---EE
T ss_pred EecCceEEeCCCCCeeEEEEEEeecCCCcceeeccccCCCCceeEEEEEccCCCCcCCCC-ccccccccccccee---ee
Confidence 4578643333 46 7677753 432221111 1223 3566766 6999873 2111 1111 11
Q ss_pred EE--eeeEEEecCCcEEE-EEeccc-C-CceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeE-Eec
Q 005279 191 VW--TGSATILPDGKLMM-LYTGST-N-ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTA-WLT 264 (704)
Q Consensus 191 v~--SGSavv~~dG~~~~-~YTG~~-~-~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vv-w~~ 264 (704)
.+ .|+.++..+|++++ .|.... . .....-.+-+|.| + .+|+... ++ + .....+|.++ |
T Consensus 171 ~~~g~G~GI~l~~G~Lv~P~~~~~~~~~~~~~~s~~iyS~D-G----~tW~~~~--~~---~----~~~~~ep~vvE~-- 234 (379)
T 3sil_A 171 MLGGVGSGLQLNDGKLVFPVQMVRTKNITTVLNTSFIYSTD-G----ITWSLPS--GY---C----EGFGSENNIIEF-- 234 (379)
T ss_dssp EEECSEECEECTTSCEEEEEEEEECTTSSCSEEEEEEEESS-S----SSEECCS--CC---E----ECTTCCEEEEEE--
T ss_pred ecCCCCceEEEcCCcEEEEEEEeeccCCCCCEEEEEEEcCC-C----CCeEECC--CC---C----CccCCCCEEEEE--
Confidence 22 35567788999776 222111 1 1223345668988 5 8998753 22 1 1245799977 4
Q ss_pred CCCeEEEEEeeecCCeeEEEEEEeCC-CCCcEEecc
Q 005279 265 SEGKWRIAIGSRINRTGITFVYDTKD-FINYELLRG 299 (704)
Q Consensus 265 ~~g~w~Mv~Gs~~~~~G~~llY~S~D-l~~W~~~~~ 299 (704)
+|+.+|+... .|...+|.|.| ...|+....
T Consensus 235 -dG~L~m~~R~----~g~r~v~~S~D~G~tWt~~~~ 265 (379)
T 3sil_A 235 -NASLVNNIRN----SGLRRSFETKDFGKTWTEFPP 265 (379)
T ss_dssp -TTEEEEEECC----SSBCBCEEESSSSSCCEECTT
T ss_pred -CCEEEEEEEe----CCCEEEEEEcCCCccCCCCcc
Confidence 6888887765 24445788866 689997543
|
| >1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A* | Back alignment and structure |
|---|
Probab=86.71 E-value=3.7 Score=46.20 Aligned_cols=100 Identities=17% Similarity=0.123 Sum_probs=62.7
Q ss_pred EeeeEEEecCCcEEEEEecccCC----ceeeEEEEEeCCCCCCccceeEeeCCCceecCCC-CCCCcCccCCeeEEecCC
Q 005279 192 WTGSATILPDGKLMMLYTGSTNE----SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPP-GIGAKDFRDPTTAWLTSE 266 (704)
Q Consensus 192 ~SGSavv~~dG~~~~~YTG~~~~----~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~-g~~~~~fRDP~Vvw~~~~ 266 (704)
-.++.+..++|.++++|.+.... ..-.+.+..|.|+| .+|.+. .++.... ......+.||.++....+
T Consensus 22 ~~P~L~~~~~G~lla~~~~~~~~~~~~~~~~i~~~rS~DgG----~TW~~~---~~l~~~~~~~~~~~~~~P~~~~d~~~ 94 (601)
T 1w8o_A 22 RIPALTVTPDGDLLASYDGRPTGIGAPGPNSILQRRSTDGG----RTWGEQ---QVVSAGQTTAPIKGFSDPSYLVDRET 94 (601)
T ss_dssp EEEEEEECTTSCEEEEEEECTTSCSTTSCCEEEEEEESSTT----SSCCCC---EEEECCBCSSSCBEEEEEEEEECTTT
T ss_pred eEeeEEECCCCCEEEEEcccCCCCCCCCcceEEEEEeCCCC----CCCCCC---EEEecCccCCCCCccccceEEEECCC
Confidence 35666666799999999987542 11246788999986 899864 2333211 111234678986554457
Q ss_pred CeEEEEEeeecC---------------CeeEEEEEEeCC-CCCcEEec
Q 005279 267 GKWRIAIGSRIN---------------RTGITFVYDTKD-FINYELLR 298 (704)
Q Consensus 267 g~w~Mv~Gs~~~---------------~~G~~llY~S~D-l~~W~~~~ 298 (704)
|+.+|+++.... ....+.+++|+| .++|+...
T Consensus 95 g~i~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~S~D~G~TWs~~~ 142 (601)
T 1w8o_A 95 GTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGLTWSHRT 142 (601)
T ss_dssp CCEEEEEEEESSCCTTTCCSCCCTTCTTSCEEEEEEESSTTSSCEEEE
T ss_pred CeEEEEEEeecCCCccccccCCCccCCceEEEEEEEecCCCCCCCCcc
Confidence 888888764211 112456677765 78999754
|
| >2xzi_A KDNAse, extracellular sialidase/neuraminidase, putative; hydrolase; HET: KDM; 1.45A {Aspergillus fumigatus} PDB: 2xcy_A* 2xzj_A* 2xzk_A* | Back alignment and structure |
|---|
Probab=84.89 E-value=8.8 Score=40.99 Aligned_cols=144 Identities=15% Similarity=0.090 Sum_probs=79.8
Q ss_pred ceEE-CCEEEEEEeeCCC-CCCCCCcEEEEEEeC---CC----cceeecccccccCCCCCCCcEEeeeEEEecCCcEEEE
Q 005279 137 PVFY-KGWYHLFYQYNPN-GAIWGDIVWGHAVSK---DL----IHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMML 207 (704)
Q Consensus 137 ~~y~-~G~YHLFYQ~nP~-~~~wG~~~WGHAvS~---DL----vhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~ 207 (704)
++.- +|..-.||--.+. ...+|.+......|+ |. .+|.. +..|.... ..++...+.+++++|+++|+
T Consensus 43 Lv~~~~G~l~A~~e~~~~~~~d~g~~~i~~~rS~~~~D~G~~~~tW~~-~~~l~~~~---~~~~~~Pt~v~~~~g~I~l~ 118 (386)
T 2xzi_A 43 VVRTTTGRILAFAEGRRHTNQDFGDINLVYKRTKTTANNGASPSDWEP-LREVVGSG---AGTWGNPTPVVDDDNTIYLF 118 (386)
T ss_dssp EEECTTSCEEEEEEEESSSSCSSSSEEEEEEEBSSSSSTTCSGGGBCC-CEEEECCS---SSEEEEEEEEECTTSCEEEE
T ss_pred EEEeCCCcEEEEEEeeeCCCCCCCceeEEEEEeeeecCCCcCceeccC-cEEEeeCC---CCcccccEEEEeCCCCEEEE
Confidence 4443 5665566644443 233577778888898 86 79985 44444432 24566677766558999999
Q ss_pred Eeccc------CC-----------------ceeeEEEEEeCCCCCCccceeEeeCCCceec--CCCCCCCcCccCC-eeE
Q 005279 208 YTGST------NE-----------------SVQVQNLAYPADPSDPLLIKWVKYPGNPVLV--PPPGIGAKDFRDP-TTA 261 (704)
Q Consensus 208 YTG~~------~~-----------------~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~--~p~g~~~~~fRDP-~Vv 261 (704)
|+... .+ ......+.+|.|++ ++|.+.. .+.. .++.+. ..+..| ..+
T Consensus 119 ~~~~~g~y~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~S~D~G----~TWs~p~--~l~~~~~~~~~~-~~~~~~g~gI 191 (386)
T 2xzi_A 119 LSWNGATYSQNGKDVLPDGTVTKKIDSTWEGRRHLYLTESRDDG----NTWSKPV--DLTKELTPDGWA-WDAVGPGNGI 191 (386)
T ss_dssp EEEECTTEESSSCCBCTTSCBCEECCSSTTTSCEEEEEEESSTT----SCCCCCE--ECHHHHSCTTCC-SCCBCSSCCE
T ss_pred EEeccccccccCcceeccCceecccccccccccEEEEEEECCCC----ccCCCcc--cCccccccccce-eeccCCccEE
Confidence 96211 00 11245678898875 8997521 1111 111221 122344 212
Q ss_pred EecCCCeEEEEEeeecCCeeEEEEEEeC--CCCCcEEecc
Q 005279 262 WLTSEGKWRIAIGSRINRTGITFVYDTK--DFINYELLRG 299 (704)
Q Consensus 262 w~~~~g~w~Mv~Gs~~~~~G~~llY~S~--Dl~~W~~~~~ 299 (704)
- -.+|++++-+- ..++|+.+ ..++|+....
T Consensus 192 ~-l~dGrLv~p~~-------~~~~~S~D~~~G~tW~~~~~ 223 (386)
T 2xzi_A 192 R-LTTGELVIPAM-------GRNIIGRGAPGNRTWSVQRL 223 (386)
T ss_dssp E-CTTSCEEEEET-------TEEEEEESSTTSCEEEEEEC
T ss_pred E-ecCCEEEEEeE-------EEEEEccCCCCCCcccccCc
Confidence 2 34777665442 23455445 5899997544
|
| >4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A | Back alignment and structure |
|---|
Probab=83.75 E-value=13 Score=35.61 Aligned_cols=39 Identities=8% Similarity=0.050 Sum_probs=29.2
Q ss_pred EEEEEEEeCCeEEEEEeCCeeEEEEeeecCcccCCccEEEEE
Q 005279 595 VYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLF 636 (704)
Q Consensus 595 l~LrI~VD~SivEvF~n~Gr~v~TsRvYP~~~~~~~~~v~lf 636 (704)
.+|||.++.+.|++|+| |+.+++.+-..-.. +..+|..+
T Consensus 134 ~~l~I~~~G~~i~~~vn-G~~v~~~~D~~~~~--G~iGl~~~ 172 (185)
T 4b1m_A 134 YHLKTEAEGDRFKIYLD-DRLVIDAHDSVFSE--GQFGLNVW 172 (185)
T ss_dssp EEEEEEEETTEEEEEET-TEEEEEEECCSCCC--EEEEEEEE
T ss_pred EEEEEEEECCEEEEEEC-CEEEEEEECCCCCC--CcEEEEEc
Confidence 79999999999999999 67888877643222 44555554
|
| >2bf6_A Sialidase, EXO-alpha-sialidase; sialic acid, hydrolase; HET: SIA; 0.97A {Clostridium perfringens} PDB: 2vk5_A 2vk6_A* 2vk7_A* | Back alignment and structure |
|---|
Probab=81.72 E-value=18 Score=39.36 Aligned_cols=67 Identities=18% Similarity=0.104 Sum_probs=42.7
Q ss_pred CCEEEEEEeeCCCCC---CCCCcEEEEEEeCCC-cceeecccccccCCCCCCCcEEeeeEEEec-CCcEEEEEec
Q 005279 141 KGWYHLFYQYNPNGA---IWGDIVWGHAVSKDL-IHWYHLPLAMVADQWYDIMGVWTGSATILP-DGKLMMLYTG 210 (704)
Q Consensus 141 ~G~YHLFYQ~nP~~~---~wG~~~WGHAvS~DL-vhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~-dG~~~~~YTG 210 (704)
+|....||...+.+. ..+++......|+|. .+|...- .|..+. +..+++..+.++++ +|+++|+|+.
T Consensus 33 ~G~lla~~~~r~~~~~d~~~~~~~i~~~rS~DgG~TWs~~~-~v~~~~--~~~~~~dp~l~~d~~~G~i~l~~~~ 104 (449)
T 2bf6_A 33 EGTLIASIDARRHGGADAPNNDIDTAVRRSEDGGKTWDEGQ-IIMDYP--DKSSVIDTTLIQDDETGRIFLLVTH 104 (449)
T ss_dssp TSCEEEEEEEETTSSCCTTSSCEEEEEEEESSTTSSCCCCE-EEECCS--TTCEEEEEEEEECTTTCCEEEEEEE
T ss_pred CCCEEEEEeCccCccccCCCCcceEEEEEcCCCCCCCCCCE-EeecCC--CccccccceeEEECCCCeEEEEEec
Confidence 566667776554432 224567888999996 7998643 333332 12456677776664 7999999873
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 704 | ||||
| d1y4wa2 | 353 | b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awa | 2e-96 | |
| d1uypa2 | 294 | b.67.2.3 (A:1-294) Beta-fructosidase (invertase), | 1e-82 | |
| d1oyga_ | 440 | b.67.2.2 (A:) Levansucrase {Bacillus subtilis [Tax | 1e-53 | |
| d1y4wa1 | 164 | b.29.1.19 (A:373-536) Exo-inulinase {Aspergillus a | 8e-19 | |
| d1uypa1 | 138 | b.29.1.19 (A:295-432) Beta-fructosidase (invertase | 2e-06 | |
| d1vkda_ | 327 | b.67.2.4 (A:) Hypothetical protein TM1225 {Thermot | 4e-04 | |
| d1vkda_ | 327 | b.67.2.4 (A:) Hypothetical protein TM1225 {Thermot | 0.002 | |
| d1gyha_ | 318 | b.67.2.1 (A:) alpha-L-arabinanase {Cellvibrio cell | 0.004 |
| >d1y4wa2 b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} Length = 353 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Score = 299 bits (767), Expect = 2e-96
Identities = 97/359 (27%), Positives = 147/359 (40%), Gaps = 50/359 (13%)
Query: 119 RTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPL 178
R +HF PQKNWMNDPNG +++ G YHLF+QYNP G WG+I WGHA+S+DL HW P+
Sbjct: 8 RGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWEEKPV 67
Query: 179 AMVADQWYDIM--GVWTGSATILPDG----------KLMMLYTG------------STNE 214
A++A + + ++GSA + L+ +YT + E
Sbjct: 68 ALLARGFGSDVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQE 127
Query: 215 SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPG---IGAKDFRDPTTAWLTSEGKWRI 271
Q Q++AY D L NPV+ PP ++FRDP W KW +
Sbjct: 128 DQQSQSIAY---SLDDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDESQKWVV 184
Query: 272 AIGSRINRTGITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHN 331
I +Y + + +++L+ G+WEC + +
Sbjct: 185 VTS--IAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPL---------DS 233
Query: 332 GPGVKHVVKASMDD-------DRHDYYAIGTYHEKNVTWVPDNPEIDVGIGIRYDYGL-F 383
G K V+ + ++ Y +G + T D D+G F
Sbjct: 234 GNSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGTTFTPDADTVYPGNSTANWMDWGPDF 293
Query: 384 YASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQGIPRTVALDT-KTGSNLLQWP 441
YA+ + + V GW+ W S IPR +AL T + + L+Q P
Sbjct: 294 YAAAGYNGLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQP 352
|
| >d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} Length = 294 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Beta-fructosidase (invertase), N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Score = 261 bits (668), Expect = 1e-82
Identities = 98/327 (29%), Positives = 153/327 (46%), Gaps = 39/327 (11%)
Query: 119 RTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPL 178
+ +HF P WMNDPNG +F+KG YH+FYQYNP WG+I WGHAVS DL+HW HLP+
Sbjct: 3 KPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPV 62
Query: 179 AMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKY 238
A+ + GV++GSA DGK+ ++YT + + + +VKY
Sbjct: 63 ALY--PDDETHGVFSGSAVE-KDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKY 119
Query: 239 PGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRIN-RTGITFVYDTKDFINYELL 297
GNPV+ PP G FRDP S G+WR+ +GS + + G +Y + D +++
Sbjct: 120 DGNPVISKPPEEGTHAFRDPKVNR--SNGEWRMVLGSGKDEKIGRVLLYTSDDLFHWKYE 177
Query: 298 RGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIGTYH 357
G + T EC D + G K ++ S+ +++G
Sbjct: 178 -GAIFEDETTKEIECPDLVRI---------------GEKDILIYSITSTNSVLFSMGEL- 220
Query: 358 EKNVTWVPDNPEIDVGIGIRYDYGL-FYASKTFYDQNKKRRVLWGWIGE--SDSEIADVK 414
+++V D+G FYA++TF+ + R V+ GW+ +
Sbjct: 221 --------KEGKLNVEKRGLLDHGTDFYAAQTFFGTD--RVVVIGWLQSWLRTGLYPTKR 270
Query: 415 KGWASLQGIPRTVALDTKTGSNLLQWP 441
+GW + +PR + ++ L P
Sbjct: 271 EGWNGVMSLPRELYVENNE---LKVKP 294
|
| >d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} Length = 440 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Levansucrase domain: Levansucrase species: Bacillus subtilis [TaxId: 1423]
Score = 189 bits (480), Expect = 1e-53
Identities = 47/391 (12%), Positives = 105/391 (26%), Gaps = 90/391 (23%)
Query: 131 MNDPNG-PVFYKGWYHLFYQYNPNGAIWGD---IVWGHAVSKDLIHWYHLPLAMVADQWY 186
+ + +G Y G++ +F + + + W + +
Sbjct: 57 LQNADGTVANYHGYHIVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKF 116
Query: 187 DIMGV--------WTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADP--SDPLLIKWV 236
D W+GSAT DGK+ + YT + + Q L + +
Sbjct: 117 DANDSILKDQTQEWSGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNIN 176
Query: 237 KYPGNPVLVPPPGIG-----------------AKDFRDP------TTAWLTSEGKWRIAI 273
+ G RDP +L E
Sbjct: 177 GVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPHYVEDKGHKYLVFEANTGTED 236
Query: 274 GSRINRT-----------------------------------GITFVYDTKDFINYELLR 298
G + + + + D+ ++++
Sbjct: 237 GYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTLKKVMK 296
Query: 299 GVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIGTYHE 358
++ T E + + + G+ L T K ++D + + Y
Sbjct: 297 PLIASNTVTDEIERANVFKM--NGKWYLFTD------SRGSKMTIDGITSNDIYMLGYVS 348
Query: 359 KNVT--WVPDNPE-IDVGIGIRYDYGLF-YASKTFYDQNKKRRVLWGWIGESDSEIADVK 414
++T + P N + + + + + F Y+ V+ ++ AD +
Sbjct: 349 NSLTGPYKPLNKTGLVLKMDLDPNDVTFTYSHFAVPQAKGNNVVITSYMTNRG-FYADKQ 407
Query: 415 KGWA-----SLQGIPRTVALDTKTGSNLLQW 440
+A +++G +V D+ L
Sbjct: 408 STFAPSFLLNIKGKKTSVVKDSILEQGQLTV 438
|
| >d1y4wa1 b.29.1.19 (A:373-536) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} Length = 164 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Glycosyl hydrolases family 32 C-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Score = 81.9 bits (202), Expect = 8e-19
Identities = 30/166 (18%), Positives = 58/166 (34%), Gaps = 34/166 (20%)
Query: 491 KTAESNVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCT 550
+T + ++ FS S F + + A + +EQT V + AK +
Sbjct: 32 ETFKVDLSFSAKSK--------ASTFAIALRASANFTEQTLVGYDFAKQQ-------IFL 76
Query: 551 DQSSTGRREILNESIGEHISCYCPNEHMYMLALSIESSQSIWNIVYVYLQVDHSIVEGFA 610
D++ +G + P+ +V + + VD S VE F
Sbjct: 77 DRTHSGDVSFDETFASVYHGPLTPDST---------------GVVKLSIFVDRSSVEVFG 121
Query: 611 QGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNSA 656
G TT+T++++P+ A L + +++ S
Sbjct: 122 GQGETTLTAQIFPSS---DAVHARLASTGGTTED-VRADIYKIAST 163
|
| >d1uypa1 b.29.1.19 (A:295-432) Beta-fructosidase (invertase), C-terminal domain {Thermotoga maritima [TaxId: 2336]} Length = 138 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Glycosyl hydrolases family 32 C-terminal domain domain: Beta-fructosidase (invertase), C-terminal domain species: Thermotoga maritima [TaxId: 2336]
Score = 45.7 bits (108), Expect = 2e-06
Identities = 13/125 (10%), Positives = 32/125 (25%), Gaps = 26/125 (20%)
Query: 534 FYIAKGKDGSLKTYFCTDQSSTGRREILNESIGEHISCYCPNEHMYMLALSIESSQSIWN 593
+ G + + S GE +E +
Sbjct: 40 IELRMGNESEEVVITKSRDELIVDTTRSGVSGGEVRKSTVEDEATNRI------------ 87
Query: 594 IVYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQM 653
+D VE F + R++P + + +N L+ +++
Sbjct: 88 ----RAFLDSCSVEFFFNDSI-AFSFRIHPENVYNI---LSVKSNQV------KLEVFEL 133
Query: 654 NSAFI 658
+ ++
Sbjct: 134 ENIWL 138
|
| >d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} Length = 327 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: TM1225-like predicted glycosylases domain: Hypothetical protein TM1225 species: Thermotoga maritima [TaxId: 2336]
Score = 40.8 bits (95), Expect = 4e-04
Identities = 19/117 (16%), Positives = 33/117 (28%), Gaps = 12/117 (10%)
Query: 136 GPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLP----LAMVADQWYDIMGV 191
V Y G + ++ SKD I+W P V + +
Sbjct: 49 AVVPYNGEFVGVFR---IDHKNTRPFLHFGRSKDGINWEIEPEEIQWVDVNGEPFQPSYA 105
Query: 192 WTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDP--LLIKWVKYPGNPVLVP 246
+ + D + T ++ + D L +V + N VL P
Sbjct: 106 YDPRVVKIEDTYYITFCTDDHGPTIG---VGMTKDFKTFVRLPNAYVPFNRNGVLFP 159
|
| >d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} Length = 327 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: TM1225-like predicted glycosylases domain: Hypothetical protein TM1225 species: Thermotoga maritima [TaxId: 2336]
Score = 38.8 bits (90), Expect = 0.002
Identities = 28/152 (18%), Positives = 49/152 (32%), Gaps = 14/152 (9%)
Query: 105 TASYPWTNNMLSWQRTAFHFQPQKNWM--NDPNGPVF---YKGWYHLFYQYNPNGAI-WG 158
+ + F N + NG +F G Y + + + NG +G
Sbjct: 122 CTDDHGPTIGVGMTKDFKTFVRLPNAYVPFNRNGVLFPRKINGKYVMLNRPSDNGHTPFG 181
Query: 159 DIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSAT--ILPDGKLMMLYTGS--TNE 214
DI + S D+IHW + + + + G+ I +++Y G T
Sbjct: 182 DIFL--SESPDMIHWGNHRFVLGRSSYNWWENLKIGAGPYPIETSEGWLLIYHGVTLTCN 239
Query: 215 SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVP 246
A D DP + + +L P
Sbjct: 240 GYVYSFGAALLDLDDPSKVLYR--SRYYLLTP 269
|
| >d1gyha_ b.67.2.1 (A:) alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: 155077]} Length = 318 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: alpha-L-arabinanase species: Cellvibrio cellulosa [TaxId: 155077]
Score = 37.7 bits (86), Expect = 0.004
Identities = 35/252 (13%), Positives = 66/252 (26%), Gaps = 26/252 (10%)
Query: 131 MNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMG 190
++DP ++LF P I+ SKD ++W + A + +
Sbjct: 7 VHDPV-MTREGDTWYLFS-TGPGITIY--------SSKDRVNWRYSDRAFATEPTWAKRV 56
Query: 191 VWTGSATIL-PD-----GKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVL 244
+ + PD G + Y+ S +P + V+
Sbjct: 57 SPSFDGHLWAPDIYQHKGLFYLYYSVSAFGKNTSAIGVTVNKTLNPASPDYRWEDKGIVI 116
Query: 245 VPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGI--------TFVYDTKDFINYEL 296
P + P G+ ++ GS + + +L
Sbjct: 117 ESVPQRDLWNAIAPAIIA-DDHGQVWMSFGSFWGGLKLFKLNDDLTRPAEPQEWHSIAKL 175
Query: 297 LRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIGTY 356
R VL G + + + + L S K + R G Y
Sbjct: 176 ERSVLMDDSQAGSAQIEAPFILRKGDYYYLFASWGLCCRKGDSTYHLVVGRSKQVT-GPY 234
Query: 357 HEKNVTWVPDNP 368
+K +
Sbjct: 235 LDKTGRDMNQGG 246
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 704 | |||
| d1uypa2 | 294 | Beta-fructosidase (invertase), N-terminal domain { | 100.0 | |
| d1y4wa2 | 353 | Exo-inulinase {Aspergillus awamori [TaxId: 105351] | 100.0 | |
| d1oyga_ | 440 | Levansucrase {Bacillus subtilis [TaxId: 1423]} | 99.96 | |
| d1y4wa1 | 164 | Exo-inulinase {Aspergillus awamori [TaxId: 105351] | 99.86 | |
| d1uypa1 | 138 | Beta-fructosidase (invertase), C-terminal domain { | 99.75 | |
| d1vkda_ | 327 | Hypothetical protein TM1225 {Thermotoga maritima [ | 99.64 | |
| d1uv4a1 | 291 | Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 14 | 99.57 | |
| d1gyha_ | 318 | alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: | 99.39 | |
| d1wl7a1 | 312 | Arabinanase-TS {Bacillus thermodenitrificans [TaxI | 99.32 | |
| d1yrza2 | 317 | Beta-D-xylosidase N-terminal domain {Bacillus halo | 99.04 | |
| d1y7ba2 | 321 | Beta-D-xylosidase N-terminal domain {Clostridium a | 99.02 | |
| d1vkda_ | 327 | Hypothetical protein TM1225 {Thermotoga maritima [ | 98.99 | |
| d2exha2 | 322 | Beta-D-xylosidase N-terminal domain {Geobacillus s | 98.94 | |
| d1uv4a1 | 291 | Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 14 | 98.04 | |
| d1uypa2 | 294 | Beta-fructosidase (invertase), N-terminal domain { | 97.72 | |
| d1gyha_ | 318 | alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: | 97.53 | |
| d2b4wa1 | 310 | Hypothetical protein LmjF10.1260 {Leishmania major | 97.33 | |
| d2exha2 | 322 | Beta-D-xylosidase N-terminal domain {Geobacillus s | 96.62 | |
| d1wl7a1 | 312 | Arabinanase-TS {Bacillus thermodenitrificans [TaxI | 96.38 | |
| d1yrza2 | 317 | Beta-D-xylosidase N-terminal domain {Bacillus halo | 95.96 | |
| d1y7ba2 | 321 | Beta-D-xylosidase N-terminal domain {Clostridium a | 95.9 | |
| d1oyga_ | 440 | Levansucrase {Bacillus subtilis [TaxId: 1423]} | 94.09 | |
| d1w8oa3 | 356 | Micromonospora sialidase, N-terminal domain {Micro | 90.51 | |
| d2b4wa1 | 310 | Hypothetical protein LmjF10.1260 {Leishmania major | 84.39 | |
| d3sila_ | 379 | Salmonella sialidase {Salmonella typhimurium, stra | 82.34 | |
| d2ah2a2 | 399 | Trypanosoma sialidase {Parasitic flagellate protoz | 81.95 |
| >d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Beta-fructosidase (invertase), N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=3e-77 Score=629.10 Aligned_cols=284 Identities=35% Similarity=0.728 Sum_probs=252.0
Q ss_pred ccccceeecCCCCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCCCCcEEeeeEE
Q 005279 118 QRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSAT 197 (704)
Q Consensus 118 ~Rp~~Hf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSav 197 (704)
+||+|||+|++||||||||++|++|+|||||||||+++.||+++||||+|+|||||+++|+||.|+. |.+|||||||+
T Consensus 2 ~Rp~~H~~p~~gw~NDPnG~~~~~G~yHlfyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~al~p~~--d~~g~~sGsav 79 (294)
T d1uypa2 2 FKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPDD--ETHGVFSGSAV 79 (294)
T ss_dssp CSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEETTSSSSCSCEEEEEEESSSSSCEEEEEEECCSS--TTEEEEEEEEE
T ss_pred CCccCcccCCCCCcCCCccceEECCEEEEEEecCCCCCCCCCcEEEEEEeCCcCCeEECCccccccc--CCCCeEEEEEE
Confidence 5999999999999999999999999999999999999999999999999999999999999999987 78899999997
Q ss_pred EecCCcEEEEEecccC-----CceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEE
Q 005279 198 ILPDGKLMMLYTGSTN-----ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIA 272 (704)
Q Consensus 198 v~~dG~~~~~YTG~~~-----~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv 272 (704)
+ .+|++++||||... ...|.|++|+|.|+ ++|+|+++||||.+++.....+||||+| | +++|+|+|+
T Consensus 80 ~-~~g~~~~~yT~~~~~~~~~~~~~~~~~a~s~dg-----~~w~k~~~npvi~~~~~~~~~~fRDP~V-~-~~~g~w~M~ 151 (294)
T d1uypa2 80 E-KDGKMFLVYTYYRDPTHNKGEKETQCVVMSENG-----LDFVKYDGNPVISKPPEEGTHAFRDPKV-N-RSNGEWRMV 151 (294)
T ss_dssp E-ETTEEEEEEEEEECCCSSCCCEEEEEEEEESSS-----SCCEECTTCCSBCSCSSTTEEEEEEEEE-E-EETTEEEEE
T ss_pred e-cCCeEEEEEEEeeCCCCCCcceeeeEEEECCCC-----CceEeecCCceecCCCccCccccCCCcc-c-ccCCEEEEE
Confidence 5 79999999998753 24688899999874 8999999999999877666789999996 5 358999999
Q ss_pred Eeeec-CCeeEEEEEEeCCCCCcEEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCCCceEE
Q 005279 273 IGSRI-NRTGITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYY 351 (704)
Q Consensus 273 ~Gs~~-~~~G~~llY~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~~~~~Y 351 (704)
+|++. ++.|++++|+|+||++|++.+++... ...+||||||||+|++ ||||+++..+.+..+|
T Consensus 152 ~g~~~~~~~G~i~ly~S~Dl~~W~~~g~l~~~-~~~~~~ECPdlf~l~~---------------~~vl~~s~~~~~~~~y 215 (294)
T d1uypa2 152 LGSGKDEKIGRVLLYTSDDLFHWKYEGAIFED-ETTKEIECPDLVRIGE---------------KDILIYSITSTNSVLF 215 (294)
T ss_dssp EEEEETTTEEEEEEEEESSSSSEEEEEEEEEE-TTCSCEEEEEEEEETT---------------EEEEEEEETTTTEEEE
T ss_pred EEeeecCCccEEEEEEcCCccceeEeccceeC-CCCCceeeceEEEeCC---------------eeEEEEEecCCCCeee
Confidence 99875 67899999999999999999988753 3456999999999963 8999999998888999
Q ss_pred EEEEeeCCceeeecCCCccccccceeeccC-CCcccceeecCCCCcEEEEEeeCCCCCc--cccccCCCCCCCCccEEEE
Q 005279 352 AIGTYHEKNVTWVPDNPEIDVGIGIRYDYG-LFYASKTFYDQNKKRRVLWGWIGESDSE--IADVKKGWASLQGIPRTVA 428 (704)
Q Consensus 352 ~iG~~d~~~~~f~p~~~~~D~g~g~~lD~G-~fYA~qtf~d~~~gRrIl~GW~~~~d~~--~~~~~~gWag~lslPRel~ 428 (704)
.+|+||.. +|+++. ..++|+| +|||+|||.+ ++||||||||++++.. .++...||+|+|||||||+
T Consensus 216 ~~G~~~~~--~f~~~~-------~~~lD~G~dfYA~qtf~~--~~R~i~~gW~~~~~~~~~~p~~~~gw~g~lslPRel~ 284 (294)
T d1uypa2 216 SMGELKEG--KLNVEK-------RGLLDHGTDFYAAQTFFG--TDRVVVIGWLQSWLRTGLYPTKREGWNGVMSLPRELY 284 (294)
T ss_dssp EEEEEETT--EEEEEE-------EEESCCSSSCEEEEECBS--CSSEEEEEESSCTTTGGGCCGGGGTEECCBCCCEEEE
T ss_pred EeeeecCC--eEEeec-------ceEEccCCceeeccCccC--CCCEEEEEECCCCcccccCCCccCCcccceeeCEEEE
Confidence 99999964 788764 2479999 6999999998 4899999999998765 4456789999999999999
Q ss_pred EccCCCceEEeec
Q 005279 429 LDTKTGSNLLQWP 441 (704)
Q Consensus 429 L~~~~G~~L~q~P 441 (704)
|+ +| +|+|+|
T Consensus 285 l~--~~-~L~q~P 294 (294)
T d1uypa2 285 VE--NN-ELKVKP 294 (294)
T ss_dssp EE--TT-EEEEEE
T ss_pred EE--CC-EEEecC
Confidence 95 45 799998
|
| >d1y4wa2 b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Probab=100.00 E-value=5.9e-77 Score=641.28 Aligned_cols=308 Identities=32% Similarity=0.624 Sum_probs=251.6
Q ss_pred cccccceeecCCCCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCC-CC-CCcEEee
Q 005279 117 WQRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQW-YD-IMGVWTG 194 (704)
Q Consensus 117 w~Rp~~Hf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~-yD-~~Gv~SG 194 (704)
-+||+|||+|++|||||||||+|++|+|||||||||+++.||+|+||||+|+|||||+++|+||.|+.. .| .+|||||
T Consensus 6 p~Rp~~H~~p~~gwlNDPnGl~y~~G~yHlFyQ~nP~~~~~g~~~WgHa~S~DLv~W~~~p~al~p~~~~~d~~~~~~SG 85 (353)
T d1y4wa2 6 PYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWEEKPVALLARGFGSDVTEMYFSG 85 (353)
T ss_dssp TTCCSSSCCCSSEEEEEEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESSSSSCEEEEEEECCBTTTSCCCBEEEEE
T ss_pred CCcCcEeecCCCCCcCCCccceEECCEEEEEEecCCCCCCCCCeEEEEEEeccccceeECCccccCCccCcCCCCccccC
Confidence 359999999999999999999999999999999999999999999999999999999999999999863 33 4689999
Q ss_pred eEEEecCC----------cEEEEEecccC------------CceeeEEEEEeCCCCCCccceeEee-CCCceecCCC-CC
Q 005279 195 SATILPDG----------KLMMLYTGSTN------------ESVQVQNLAYPADPSDPLLIKWVKY-PGNPVLVPPP-GI 250 (704)
Q Consensus 195 Savv~~dG----------~~~~~YTG~~~------------~~~q~q~lA~S~D~~D~~l~~W~K~-~~nPVl~~p~-g~ 250 (704)
||+++.+| .++++|||+.. ...|.||+|+|.|.+ ++|+|+ +.||||..++ +.
T Consensus 86 sav~~~~~~~~~~~~g~~~l~~~YT~~~~~~~~~~~~~~~~~~~~~q~~A~s~d~g----~~~~~~~~~npvi~~~~~~~ 161 (353)
T d1y4wa2 86 SAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQEDQQSQSIAYSLDDG----LTWTTYDAANPVIPNPPSPY 161 (353)
T ss_dssp EEEECTTCTTSCCCSSSCCEEEEEEEEESSCEECTTSCEECTTEEEEEEEEESSTT----SSCEECTTTCCSBCSCCTTC
T ss_pred ceEecCCCccccccCCCceEEEEEeeeecccccccCcccccCCcEEEEEEEECCCC----cceEEecCCCeEecCCCCCC
Confidence 99876443 58899999743 235889999999864 788887 4799998544 33
Q ss_pred --CCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCcEEecceeccCCCCCceeeeeeEEcCCCCCCCccc
Q 005279 251 --GAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDT 328 (704)
Q Consensus 251 --~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~ 328 (704)
...+||||+|+|.+ ++.|+|+++ ...+.|.+++|+|+||++|++.+++.......+||||||||+|+..+
T Consensus 162 ~~~~~~fRDP~V~~~~-~~~~~~~~~-~~~~~g~v~ly~S~Dl~~W~~~g~l~~~~~~g~~wECPdlf~l~~~~------ 233 (353)
T d1y4wa2 162 EAEYQNFRDPFVFWHD-ESQKWVVVT-SIAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDS------ 233 (353)
T ss_dssp GGGTTSEEEEEEEEET-TTTEEEEEE-EEGGGTEEEEEEESSSSSCEEEEEECCCSCCSSEEEEEEEEEEEBTT------
T ss_pred cccccccCCCceEEEC-CCCEEEEEE-eecCCCeEEEEecCCCCceEEeccccccCCCCcceeeeEEEEeecCC------
Confidence 34699999987753 433333333 33446889999999999999999986554445699999999997654
Q ss_pred ccCCCCcEEEEEEeeCCC-------CceEEEEEEeeCCceeeecCCCcc--ccccceeeccC-CCcccceeecCCCCcEE
Q 005279 329 SHNGPGVKHVVKASMDDD-------RHDYYAIGTYHEKNVTWVPDNPEI--DVGIGIRYDYG-LFYASKTFYDQNKKRRV 398 (704)
Q Consensus 329 ~~~g~~~k~VL~~s~~~~-------~~~~Y~iG~~d~~~~~f~p~~~~~--D~g~g~~lD~G-~fYA~qtf~d~~~gRrI 398 (704)
|...+|||..+.... .++.|++|+||+. +|+|+.... ..+...++||| +|||+|||.|+.++|||
T Consensus 234 ---~~~~~~vl~~g~~~~~~~~~~~~~~~Y~vG~~d~~--~f~~~~~~~~~~~~~~~~lD~G~dfYA~qtf~d~~~gRri 308 (353)
T d1y4wa2 234 ---GNSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGT--TFTPDADTVYPGNSTANWMDWGPDFYAAAGYNGLSLNDHV 308 (353)
T ss_dssp ---SSCEEEEEEEEEESCCSTTCCSCEEEEEEEEECSS--CEEECTTTSCSSSSCCEESCSSSSCEEEEECBSCCGGGCE
T ss_pred ---CCceEEEEEecccCCCCcccccccceEEEEEecCc--eeeecCCccccCCCccceeecCcCeeECCceeCCCCCCEE
Confidence 245799998876532 3578999999975 688775433 23345789999 69999999997789999
Q ss_pred EEEeeCCCCCccccccCCCCCCCCccEEEEEccC-CCceEEeec
Q 005279 399 LWGWIGESDSEIADVKKGWASLQGIPRTVALDTK-TGSNLLQWP 441 (704)
Q Consensus 399 l~GW~~~~d~~~~~~~~gWag~lslPRel~L~~~-~G~~L~q~P 441 (704)
|||||++++...+..++||+|+|||||||+|++. ++.+|+|+|
T Consensus 309 ~~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~~~~~~~L~Q~P 352 (353)
T d1y4wa2 309 HIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQP 352 (353)
T ss_dssp EEEECSCTTTGGGCCCSSEECCBCCCEEEEEEEETTEEEEEEEE
T ss_pred EEEecCCCccCCCCCCCCcceeeEeCEEEEEEECCCCCEEEEcC
Confidence 9999999998888888999999999999999752 234899998
|
| >d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Levansucrase domain: Levansucrase species: Bacillus subtilis [TaxId: 1423]
Probab=99.96 E-value=4.7e-29 Score=273.76 Aligned_cols=276 Identities=13% Similarity=0.164 Sum_probs=191.8
Q ss_pred ccCCCcceE-ECCEEEEEEeeCCCCCCCC---CcEEEEEEeCCCcceeecccccccCC--------CCCCCcEEeeeEEE
Q 005279 131 MNDPNGPVF-YKGWYHLFYQYNPNGAIWG---DIVWGHAVSKDLIHWYHLPLAMVADQ--------WYDIMGVWTGSATI 198 (704)
Q Consensus 131 mNDPNG~~y-~~G~YHLFYQ~nP~~~~wG---~~~WGHAvS~DLvhW~~lp~AL~Pd~--------~yD~~Gv~SGSavv 198 (704)
+.|++|-+. ++|++|+|++..|....+. ...+.|+.|+||.||++.+.++.+.. ..+..+-|||||++
T Consensus 57 l~d~~g~~~~~~G~~~~f~L~a~~~~~~d~~i~~~y~~~~s~dl~~W~~~G~vf~d~~~~~~~~~~~~~~~~eWSGSAv~ 136 (440)
T d1oyga_ 57 LQNADGTVANYHGYHIVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKFDANDSILKDQTQEWSGSATF 136 (440)
T ss_dssp EECTTSSBCCBTTEEEEEEEEECTTCTTCCEEEEEEEETTCCSGGGCEEEEESCCTTHHHHTTCTTGGGCCEEEEEEEEE
T ss_pred eECCCCCEEEECCEEEEEEEeCCCCCCCCCeEEEEEeecCCCccCCCEECccccCCCccccccccccCCCCccCccceEE
Confidence 678888554 7999999999886533221 24456677899999999997775432 12345679999998
Q ss_pred ecCCcEEEEEecccCC--ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCC-----------------CCcCccCCe
Q 005279 199 LPDGKLMMLYTGSTNE--SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGI-----------------GAKDFRDPT 259 (704)
Q Consensus 199 ~~dG~~~~~YTG~~~~--~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~-----------------~~~~fRDP~ 259 (704)
+.||+++|||||.... ..|++..|...-..|++...|++.+.+++|..|+|. ...+||||+
T Consensus 137 ~~DG~~~LfYTg~~~~~~~~q~i~~a~~~~~~d~~~~~~~~~~~~~~l~~pDG~~Yqt~~q~~~~~~~~~~d~~~fRDP~ 216 (440)
T d1oyga_ 137 TSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPH 216 (440)
T ss_dssp CTTSCEEEEEEEEEGGGTTEEEEEEEEEEEEECSSCEEEEEEEEEEEEECCCSSSBCCHHHHHHHTGGGGTCCCCCEEEE
T ss_pred ccCCeEEEEEEeccCCCCCcceEEEEEEEEeecCCcceeecccCCceeecCCCccceeeecccccCCCCCCCcccccCCc
Confidence 8899999999997643 223222221100011234788888777777655442 235899999
Q ss_pred eEEecCCCeEEEEEeeecC-------------------------------------------CeeEEEEEEeCCCCCcEE
Q 005279 260 TAWLTSEGKWRIAIGSRIN-------------------------------------------RTGITFVYDTKDFINYEL 296 (704)
Q Consensus 260 Vvw~~~~g~w~Mv~Gs~~~-------------------------------------------~~G~~llY~S~Dl~~W~~ 296 (704)
| | +.+|+|||++++... ..++.+++.++|+.+|++
T Consensus 217 v-~-~~~g~~y~~fegn~~~~~G~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~ng~I~l~~~s~D~~~We~ 294 (440)
T d1oyga_ 217 Y-V-EDKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTLKKV 294 (440)
T ss_dssp E-E-EETTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEEEEEECTTSSEEEE
T ss_pred e-e-eeCCeEEEEEeccccccccccccchhccccccccccccccccccccccccccccceeccceEEEEEeCCCccccee
Confidence 5 4 357999999987531 123455667999999999
Q ss_pred ecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEee-------CCCCceE----EEEEEeeCCceeeec
Q 005279 297 LRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASM-------DDDRHDY----YAIGTYHEKNVTWVP 365 (704)
Q Consensus 297 ~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~-------~~~~~~~----Y~iG~~d~~~~~f~p 365 (704)
.++++++....+|||||++|++++ ||+|+.|. ++.++.. +++| |.-.+.|+|
T Consensus 295 ~~pLl~a~~v~d~~ErP~I~~~nG---------------KYYLFtss~~~~~a~~~~~~~~~~~~g~Vs--dsl~Gpy~P 357 (440)
T d1oyga_ 295 MKPLIASNTVTDEIERANVFKMNG---------------KWYLFTDSRGSKMTIDGITSNDIYMLGYVS--NSLTGPYKP 357 (440)
T ss_dssp EEEEEECTTTCSCCEEEEEEEETT---------------EEEEEEEEEGGGCCCTTCCTTCEEEEEEEE--SSTTCCCEE
T ss_pred cCcceeccCCCCeEECCEEEEECC---------------EEEEEEecccccccCCCcCCCCceEEEEEC--CCCCCCCee
Confidence 999998776667999999999963 88888763 2333333 3444 455578999
Q ss_pred CCCc-cccccceeeccCC-CcccceeecCCCCcEEEEEeeCCCCCccccccCCCCCCCCccEEEEEc
Q 005279 366 DNPE-IDVGIGIRYDYGL-FYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQGIPRTVALD 430 (704)
Q Consensus 366 ~~~~-~D~g~g~~lD~G~-fYA~qtf~d~~~gRrIl~GW~~~~d~~~~~~~~gWag~lslPRel~L~ 430 (704)
.+.. ++++.....|++. .|+..+|.+....++++++||.+++. ..... |.++-+.+|.|+
T Consensus 358 lN~sGlvl~~~~~~~~~~~~Ys~~~~p~g~~~~~lv~s~~~~~~~-~~~~g----~t~APt~~l~l~ 419 (440)
T d1oyga_ 358 LNKTGLVLKMDLDPNDVTFTYSHFAVPQAKGNNVVITSYMTNRGF-YADKQ----STFAPSFLLNIK 419 (440)
T ss_dssp GGGTSEEEEECCCTTCTTCEEEEEEECCSSSSEEEEEEEESCTTS-CSSCC----CEECBCEEEEEE
T ss_pred cCCCcceeccCCCCCcCcccceeEEecCCCCceEEEEEeecCcCc-ccccC----CccCCcEEEEEc
Confidence 8743 6777777889996 49999999877788999999999873 22223 444455556664
|
| >d1y4wa1 b.29.1.19 (A:373-536) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Glycosyl hydrolases family 32 C-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Probab=99.86 E-value=1e-21 Score=188.46 Aligned_cols=117 Identities=24% Similarity=0.325 Sum_probs=92.6
Q ss_pred ceEEEEEEcCCCCceeeEEEEEeeCCCCceeEeEEecCCCCCccccccccccceeeEeecCcchhhhhccccccccccce
Q 005279 515 PFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSSTGRREILNESIGEHISCYCPNEHMYMLALSIESSQSIWNI 594 (704)
Q Consensus 515 ~fGl~v~a~~~~~e~t~v~f~~~~~~dg~~~~~~~~Dr~rSs~~~~~~~~~G~~~~~~~Pv~~~~~~~l~~e~~~~~~~~ 594 (704)
.|||.|++++++.|+|.|+|+..++ .+++||++|+... +.+.++..+ ..|+. ...+++
T Consensus 48 ~fgl~lr~s~d~~e~t~i~yd~~~~-------~l~vDRs~sg~~~-~~~~~~~~~--~~~~~-----~~~~~~------- 105 (164)
T d1y4wa1 48 TFAIALRASANFTEQTLVGYDFAKQ-------QIFLDRTHSGDVS-FDETFASVY--HGPLT-----PDSTGV------- 105 (164)
T ss_dssp EEEEEEEECTTSSSCEEEEEETTTT-------EEEEECTTSSCCT-TCTTTSCEE--EEECC-----CCTTSE-------
T ss_pred EEEEEEEEcCCCCEEEEEEEECCCC-------EEEEECCCCCCCc-cccccccee--EEecc-----cCCCCe-------
Confidence 5999999999999999999976542 3789999997532 223444432 44441 023455
Q ss_pred EEEEEEEeCCeEEEEEeCCeeEEEEeeecCcccCCccEEEEEeCCCCcEEEEEEEEeeccccc
Q 005279 595 VYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNSAF 657 (704)
Q Consensus 595 l~LrI~VD~SivEvF~n~Gr~v~TsRvYP~~~~~~~~~v~lf~~~~~~~v~~sl~iw~m~s~~ 657 (704)
++||||||+|+||||+|||+.|+|+|+||.+. +.+|.+|++++.+.+. ++++|+|+|+|
T Consensus 106 l~Lri~vD~ssvEvF~NdG~~~~T~~~fp~~~---~~~i~~~s~gg~~~~~-~l~v~~lksiW 164 (164)
T d1y4wa1 106 VKLSIFVDRSSVEVFGGQGETTLTAQIFPSSD---AVHARLASTGGTTEDV-RADIYKIASTW 164 (164)
T ss_dssp EEEEEEEETTEEEEEETTTTEEEEEECCCCTT---CCEEEEEEESSCEEEE-EEEEEEBCCCC
T ss_pred EEEEEEEECcEEEEEECCCeEEEEEEecCCCC---CCEEEEEEcCCeEEEE-EEEEEeccccC
Confidence 99999999999999999999999999999864 6799999988766664 89999999998
|
| >d1uypa1 b.29.1.19 (A:295-432) Beta-fructosidase (invertase), C-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Glycosyl hydrolases family 32 C-terminal domain domain: Beta-fructosidase (invertase), C-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=99.75 E-value=9.2e-18 Score=156.06 Aligned_cols=79 Identities=15% Similarity=0.191 Sum_probs=61.2
Q ss_pred EEecCCCCCccccccccccceeeEeecCcchhhhhccccccccccceEEEEEEEeCCeEEEEEeCCeeEEEEeeecCccc
Q 005279 548 FCTDQSSTGRREILNESIGEHISCYCPNEHMYMLALSIESSQSIWNIVYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAI 627 (704)
Q Consensus 548 ~~~Dr~rSs~~~~~~~~~G~~~~~~~Pv~~~~~~~l~~e~~~~~~~~l~LrI~VD~SivEvF~n~Gr~v~TsRvYP~~~~ 627 (704)
+++||++|+... +..+ .+|+ ..+++ ++||||||+|+||||+|||+ |||+||||++.
T Consensus 60 l~~dR~~s~~~~------~~~r--~~~~-------~~~~~-------~~LrIfvD~SsvEiFiNdg~-v~t~rvfP~~~- 115 (138)
T d1uypa1 60 LIVDTTRSGVSG------GEVR--KSTV-------EDEAT-------NRIRAFLDSCSVEFFFNDSI-AFSFRIHPENV- 115 (138)
T ss_dssp EEEECTTSSTTC------CCEE--EEEC-------CCCSS-------EEEEEEEETTEEEEEETTTE-EEEEECCCSSC-
T ss_pred EEEEeeccccCC------CceE--EEEc-------CCCCc-------EEEEEEEEeeEEEEEECCCE-EEEEEEcCCCC-
Confidence 789999987532 2322 4554 34566 99999999999999999997 99999999876
Q ss_pred CCccEEEEEeCCCCcEEEEEEEEeecccccc
Q 005279 628 YGAARVFLFNNATGASVTSSLKAWQMNSAFI 658 (704)
Q Consensus 628 ~~~~~v~lf~~~~~~~v~~sl~iw~m~s~~~ 658 (704)
..++.++.+. .++++|+|+|+|+
T Consensus 116 --~~~i~~~~~~------~~~~~~~Lksiw~ 138 (138)
T d1uypa1 116 --YNILSVKSNQ------VKLEVFELENIWL 138 (138)
T ss_dssp --CCEEEEEEEE------EEEEEEEECCSCC
T ss_pred --CcEEEEEecc------cEEEEEEcccccC
Confidence 3467776531 3789999999995
|
| >d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: TM1225-like predicted glycosylases domain: Hypothetical protein TM1225 species: Thermotoga maritima [TaxId: 2336]
Probab=99.64 E-value=7.5e-16 Score=162.35 Aligned_cols=156 Identities=17% Similarity=0.150 Sum_probs=116.7
Q ss_pred cceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecc-cccccCC---CCCCCcEEeeeEEEecCCcEEEEEecc
Q 005279 136 GPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLP-LAMVADQ---WYDIMGVWTGSATILPDGKLMMLYTGS 211 (704)
Q Consensus 136 G~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp-~AL~Pd~---~yD~~Gv~SGSavv~~dG~~~~~YTG~ 211 (704)
|+++++|+|||+|+-. ..++.++||+|+|+|+|||+..+ +.+.|+. .++..||++++++. .+|+++|+||+.
T Consensus 49 ~~i~~~g~~~ll~r~~---~~~~~~~ig~A~S~DGi~w~~~~~pv~~p~~~~~~~~~~gv~DPrv~~-~~d~yym~yt~~ 124 (327)
T d1vkda_ 49 AVVPYNGEFVGVFRID---HKNTRPFLHFGRSKDGINWEIEPEEIQWVDVNGEPFQPSYAYDPRVVK-IEDTYYITFCTD 124 (327)
T ss_dssp EEEEETTEEEEEEEEE---ETTSCEEEEEEEESSSSSCEECSSCCCEECTTSCBCCCSSEEEEEEEE-ETTEEEEEEEEE
T ss_pred EEEEECCEEEEEEEec---CCCCceEEEEEEcCCccCCEeCCCCeecCCCCCcccccCcEEcceEEE-ECCEEEEEEEec
Confidence 7899999999999964 24578999999999999999765 4567765 35677999999974 689999999987
Q ss_pred cCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec---CCeeEEEEEEe
Q 005279 212 TNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI---NRTGITFVYDT 288 (704)
Q Consensus 212 ~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~---~~~G~~llY~S 288 (704)
.. .+.+++|+|+|. ++|+|.+ +++. ...||+.++..+.+|+|+|+..... ...|.+.+.+|
T Consensus 125 ~~--~~~i~lA~S~D~-----~~w~k~g--~~~~-------~~~kd~~lfpeki~Gky~ml~Rp~~~~~~~~~~I~la~S 188 (327)
T d1vkda_ 125 DH--GPTIGVGMTKDF-----KTFVRLP--NAYV-------PFNRNGVLFPRKINGKYVMLNRPSDNGHTPFGDIFLSES 188 (327)
T ss_dssp SS--SEEEEEEEESSS-----SSEEEEC--CSSS-------SSEEEEEECSSCBTTBEEEEEEECCSSSCSCCCEEEEEE
T ss_pred CC--CcEEEEEEecCc-----chheecC--CccC-------ccccCceEeeeeccCeEEEEEeeccCCCcccceEEEEcC
Confidence 54 367899999995 8999974 3322 2347887433346899999965432 23456889999
Q ss_pred CCCCCcEEecceeccCCCCCceee
Q 005279 289 KDFINYELLRGVLHGVPNTGMWEC 312 (704)
Q Consensus 289 ~Dl~~W~~~~~l~~~~~~~gmWEC 312 (704)
+||.+|+....++.. ...+.||+
T Consensus 189 ~Dl~~W~~~~~v~~~-~~~~~wd~ 211 (327)
T d1vkda_ 189 PDMIHWGNHRFVLGR-SSYNWWEN 211 (327)
T ss_dssp SSSSCBEEEEEEECC-CSSCGGGS
T ss_pred CCcccccccceeccc-CCCCceee
Confidence 999999987666543 22346764
|
| >d1uv4a1 b.67.2.1 (A:3-293) Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Endo-1,5-arabinanase species: Bacillus subtilis [TaxId: 1423]
Probab=99.57 E-value=1.3e-13 Score=141.37 Aligned_cols=191 Identities=16% Similarity=0.141 Sum_probs=123.9
Q ss_pred ccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCC-------CCCcEEeeeEEEecCCc
Q 005279 131 MNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWY-------DIMGVWTGSATILPDGK 203 (704)
Q Consensus 131 mNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~y-------D~~Gv~SGSavv~~dG~ 203 (704)
++||+ +++++|+||||+..... ...+.++.|+||+||+..+.++.+.... ...++|.++++ ..+|+
T Consensus 10 ihDP~-vi~~~g~YY~~~t~~~~-----~~g~~i~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~-~~~g~ 82 (291)
T d1uv4a1 10 LHDPT-MIKEGSSWYALGTGLTE-----ERGLRVLKSSDAKNWTVQKSIFTTPLSWWSNYVPNYGQNQWAPDIQ-YYNGK 82 (291)
T ss_dssp CSSCE-EEEETTEEEEEEECCTT-----SSBEEEEEESSSSSCEEEEEETSSCCGGGGGTSTTCCSBCEEEEEE-EETTE
T ss_pred ccCCE-EEEECCEEEEEEecCCC-----CCcEEEEECCCCCCCEECcccccCCcccccccCCccCCcccceEEE-EECCE
Confidence 45997 89999999999864221 2357889999999999998776543311 13579999986 47999
Q ss_pred EEEEEecccCC-ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeE
Q 005279 204 LMMLYTGSTNE-SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGI 282 (704)
Q Consensus 204 ~~~~YTG~~~~-~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~ 282 (704)
++|+|++.... ..+.+++|++++.. ...|+.. ++++...+. .....+||.++| +++|++||+.+... .|+
T Consensus 83 yylyy~~~~~~~~~~~i~~a~s~~~~---~Gpw~~~--~~~~~~~~~-~~~~~iDp~vf~-D~dG~~Y~~~~~~~--~~i 153 (291)
T d1uv4a1 83 YWLYYSVSSFGSNTSAIGLASSTSIS---SGGWKDE--GLVIRSTSS-NNYNAIDPELTF-DKDGNPWLAFGSFW--SGI 153 (291)
T ss_dssp EEEEEEECCTTCSCEEEEEEEESCTT---TTCCEEE--EEEEEECTT-SSSCCCSCEEEE-CTTSCEEEEECBST--TCE
T ss_pred EEEEEEecCCCCCcceEEEEEeCCCC---CCCCCcC--ccccccccC-CCCCccCceEEE-ecCCcEEEEecccC--Cce
Confidence 99999987543 35678899997731 1458764 344332222 124568999776 57899999998542 233
Q ss_pred EEEEEeCCCCCcEEeccee---ccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCC---CceEEEEE
Q 005279 283 TFVYDTKDFINYELLRGVL---HGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDD---RHDYYAIG 354 (704)
Q Consensus 283 ~llY~S~Dl~~W~~~~~l~---~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~---~~~~Y~iG 354 (704)
.+.--+.|.. ...+... ......++.|||.+|+.++ +++|..|.... ....|.++
T Consensus 154 ~i~~l~~~~~--~~~g~~~~i~~~~~~~~~~EgP~i~k~~g---------------~Yyl~~S~~~~~~~~~~~y~v~ 214 (291)
T d1uv4a1 154 KLTKLDKSTM--KPTGSLYSIAARPNNGGALEAPTLTYQNG---------------YYYLMVSFDKCCDGVNSTYKIA 214 (291)
T ss_dssp EEEEECTTTC--SEEEEEEEEECCTTTTTCEEEEEEEEETT---------------EEEEEEEEECSSSSSCCEEEEE
T ss_pred EEEeeccccc--cCcCceeEEEecCCCCccccccEEEEECC---------------EEEEEEecCcccCCCCCCceeE
Confidence 3322334433 3333321 1112335899999999853 78888886432 23345554
|
| >d1gyha_ b.67.2.1 (A:) alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: alpha-L-arabinanase species: Cellvibrio cellulosa [TaxId: 155077]
Probab=99.39 E-value=9e-12 Score=127.26 Aligned_cols=183 Identities=14% Similarity=0.128 Sum_probs=117.4
Q ss_pred ccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCC-------CCCCcEEeeeEEEecCCc
Q 005279 131 MNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQW-------YDIMGVWTGSATILPDGK 203 (704)
Q Consensus 131 mNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~-------yD~~Gv~SGSavv~~dG~ 203 (704)
+.||+ +++++|+||||.. .+ ++...+|+||+||+.++.++.+... ....++|.++++ ..+|+
T Consensus 7 ~~DP~-v~~~~g~yYl~~t-~~--------gi~~~~S~DLvnW~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~-~~~g~ 75 (318)
T d1gyha_ 7 VHDPV-MTREGDTWYLFST-GP--------GITIYSSKDRVNWRYSDRAFATEPTWAKRVSPSFDGHLWAPDIY-QHKGL 75 (318)
T ss_dssp CSSCE-EEEETTEEEEEES-EE--------TCEEEEESSSSEEEEEEESSSSCCTTHHHHCTTCCSEEEEEEEE-EETTE
T ss_pred CCCCE-EEEECCEEEEEEe-eC--------CEEEEECCCCCCCeECCccccCCccccccCCCcCCCceECCEEE-EEcCc
Confidence 46998 7889999999853 22 2457799999999999988764321 124579999986 47899
Q ss_pred EEEEEecccCC-ceeeEEEEEeCCC-CCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCee
Q 005279 204 LMMLYTGSTNE-SVQVQNLAYPADP-SDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTG 281 (704)
Q Consensus 204 ~~~~YTG~~~~-~~q~q~lA~S~D~-~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G 281 (704)
++|||++.... ....+.+|++... .+.....|++. .+++...+......++||.+++ .++|++||+.++... +
T Consensus 76 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~iDp~v~~-d~dG~~Yl~~~~~~~--~ 150 (318)
T d1gyha_ 76 FYLYYSVSAFGKNTSAIGVTVNKTLNPASPDYRWEDK--GIVIESVPQRDLWNAIAPAIIA-DDHGQVWMSFGSFWG--G 150 (318)
T ss_dssp EEEEEEECCTTSCCEEEEEEEESCSCTTSTTCCCEEE--EEEEEECTTTCSSCCCCCEEEE-CTTSCEEEEECBSTT--C
T ss_pred eEEEEEEecCCCcccceeEEEEeccCCCccccccccC--ceecccCCCCCCCceEccceEe-ecCCcEEEeccCCCC--C
Confidence 99999987643 3455667776532 12233678774 2344333444456789999655 679999999886532 2
Q ss_pred EEEEEE-eCCCC------CcEEeccee----ccC--CCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCC
Q 005279 282 ITFVYD-TKDFI------NYELLRGVL----HGV--PNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDD 345 (704)
Q Consensus 282 ~~llY~-S~Dl~------~W~~~~~l~----~~~--~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~ 345 (704)
+. +.+ ..|+. .|....... ... ....++|||.+|+.++ +++|..|...
T Consensus 151 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~g---------------~yyl~yS~~~ 211 (318)
T d1gyha_ 151 LK-LFKLNDDLTRPAEPQEWHSIAKLERSVLMDDSQAGSAQIEAPFILRKGD---------------YYYLFASWGL 211 (318)
T ss_dssp EE-EEEBCTTSSSBCSSCCEEEEECCCCCTTSCTTSCCSCCEEEEEEEEETT---------------EEEEEEEESC
T ss_pred ee-eEecCccceeeccccccccccccccceeeccCCCCCceeecCEEEEECC---------------EEEEEEecCC
Confidence 21 222 23332 233222211 111 1234899999999963 7888887643
|
| >d1wl7a1 b.67.2.1 (A:2-313) Arabinanase-TS {Bacillus thermodenitrificans [TaxId: 33940]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Arabinanase-TS species: Bacillus thermodenitrificans [TaxId: 33940]
Probab=99.32 E-value=2.9e-11 Score=124.05 Aligned_cols=183 Identities=16% Similarity=0.158 Sum_probs=116.4
Q ss_pred CccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccC--------CCCCCCcEEeeeEEEecC
Q 005279 130 WMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVAD--------QWYDIMGVWTGSATILPD 201 (704)
Q Consensus 130 WmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd--------~~yD~~Gv~SGSavv~~d 201 (704)
|..||+ +++++|+||||... .++..++|+||+||+..+.+|... .+.+..++|.+.++. .+
T Consensus 23 ~~~DP~-i~~~~g~yY~~~t~---------~gi~i~~S~DL~nW~~~g~~l~~~~~~~~~~~~~~~~~~~WAP~v~~-~~ 91 (312)
T d1wl7a1 23 WAHDPV-IAKEGSRWYVFHTG---------SGIQIKTSEDGVHWENMGRVFPSLPDWCKQYVPEKDEDHLWAPDICF-YN 91 (312)
T ss_dssp BCSSCE-EEEETTEEEEEESE---------ETCEEEEESSSSEEEEEEESCSSCCTTHHHHCTTCCSCEEEEEEEEE-ET
T ss_pred CcCCCE-EEEECCEEEEEEec---------CCceEEEcCCCCCceECcccccCCcccccccCCcccCCceEcceEEE-eC
Confidence 557997 78899999998431 135789999999999999887533 235678999999865 68
Q ss_pred CcEEEEEecccCC-ceeeEEEEEeCC-CCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCC
Q 005279 202 GKLMMLYTGSTNE-SVQVQNLAYPAD-PSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINR 279 (704)
Q Consensus 202 G~~~~~YTG~~~~-~~q~q~lA~S~D-~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~ 279 (704)
|+++|+||+.... ....+.+|.+.- ..+.....|++. .|++..++. ....++||.+++ .++|++||+.+....
T Consensus 92 g~yyl~~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~--~~~~~~~~~-~~~~~iD~~~f~-d~dG~~y~~~~~~~~- 166 (312)
T d1wl7a1 92 GIYYLYYSVSTFGKNTSVIGLATNRTLDPRDPDYEWKDM--GPVIHSTAS-DNYNAIDPNVVF-DQEGQPWLSFGSFWS- 166 (312)
T ss_dssp TEEEEEEEECCTTCCCEEEEEEEESCSCTTSTTCCCEEE--EEEEEECTT-SSSCCCSCEEEE-CTTSCEEEEECBSTT-
T ss_pred CEEEEEEEeecCCcccceeeEEEEecccCCCCccccccc--cceecCCCC-CCCCcCCCceeE-ccCCcEEEeecCCCC-
Confidence 9999999987643 234455665432 112223556653 455543322 235789999655 678999998875432
Q ss_pred eeEEEEEE-eCCCCCcE-EecceeccC--CCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCC
Q 005279 280 TGITFVYD-TKDFINYE-LLRGVLHGV--PNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDD 345 (704)
Q Consensus 280 ~G~~llY~-S~Dl~~W~-~~~~l~~~~--~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~ 345 (704)
+ +.+++ +.|..... ....+.... ......|+|.+|+.++ +++|..|...
T Consensus 167 -~-i~~~~l~~d~~~~~~~~~~i~~~~~~~~~~~~EgP~v~k~~g---------------~yYl~ys~~~ 219 (312)
T d1wl7a1 167 -G-IQLIQLDTETMKPAAQAELLTIASRGEEPNAIEAPFIVCRNG---------------YYYLFVSFDF 219 (312)
T ss_dssp -C-EEEEEBCTTTCSBCTTCCCEEEECCSSSSCCEEEEEEEEETT---------------EEEEEEEESC
T ss_pred -c-eeEEEEcCcCCcCcCCceEEEecccCCCCCcccccEEEEECC---------------cEEEEEecCC
Confidence 2 33333 33433211 111222111 1224689999999753 7888887643
|
| >d1yrza2 b.67.2.1 (A:1004-1320) Beta-D-xylosidase N-terminal domain {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Bacillus halodurans [TaxId: 86665]
Probab=99.04 E-value=4e-09 Score=108.29 Aligned_cols=180 Identities=15% Similarity=0.145 Sum_probs=111.7
Q ss_pred CCCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCC------CCCCCcEEeeeEEEecC
Q 005279 128 KNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQ------WYDIMGVWTGSATILPD 201 (704)
Q Consensus 128 ~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~------~yD~~Gv~SGSavv~~d 201 (704)
.|+.-||. +++++|.||||+..+.. ...+...+|+||+||+.++.+|.... ......+|.+.+. ..+
T Consensus 8 ~~~~aDP~-vi~~~~~yY~~~tt~~~-----~~gi~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~-~~~ 80 (317)
T d1yrza2 8 PGFHPDPS-IVRVGDDYYIATSTFEW-----FPGVRIHHSRDLKHWRFVSSPLTRTSQLDMKGNMNSGGIWAPCLS-YHD 80 (317)
T ss_dssp CSSCCSCE-EEEETTEEEEEECCBTE-----ESBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEE-EET
T ss_pred CCCCCCCE-EEEECCEEEEEEccCCC-----CCCeEEEECCCCCCCeECCccccCccccccCCCcccceeecceEE-EEC
Confidence 35678997 68899999999753211 11244579999999999988775433 2334568999875 579
Q ss_pred CcEEEEEecccC----CceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec
Q 005279 202 GKLMMLYTGSTN----ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI 277 (704)
Q Consensus 202 G~~~~~YTG~~~----~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~ 277 (704)
|+++|+|+.... .....+.+|.+.+.. ..|+ .|+.. .....||.+++ +++|++||+.+...
T Consensus 81 G~~ylyy~~~~~~~~~~~~~~~~~~~a~~p~----gp~~----~~~~~------~~~~iDp~~f~-D~dG~~Yl~~~~~~ 145 (317)
T d1yrza2 81 GTFYLIYTDVKQWHGAFKDAHNYLVTAQNIE----GPWS----DPIYL------NSSGFDPSLFH-DDDGRKWLVNMIWD 145 (317)
T ss_dssp TEEEEEEEEEEECSSSCCEEEEEEEEESSSS----SCCC----CCEEC------CCSCSCCEEEE-CTTSCEEEEEEEEC
T ss_pred CEEEEEEEEeccCCCCcccceEEEEecCCCC----CCcc----ceeee------cCCccCCcEEE-ecCCCEEEEEeccC
Confidence 999999997542 123445567766542 3453 23332 13457999655 67899999887653
Q ss_pred C------CeeEEEEEEeCCCCCcEEecceec--cCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCC
Q 005279 278 N------RTGITFVYDTKDFINYELLRGVLH--GVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDD 346 (704)
Q Consensus 278 ~------~~G~~llY~S~Dl~~W~~~~~l~~--~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~ 346 (704)
. ..++.+.-.+.+ .++..++... ........|+|.+|+.++ +++|..|....
T Consensus 146 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Egp~i~k~~g---------------~yyl~~s~~~~ 205 (317)
T d1yrza2 146 YRKGNHPFAGIILQEYSEA--EQKLVGPVKNIYKGTDIQLTEGPHLYKKDG---------------YYYLLVAEGGT 205 (317)
T ss_dssp CCTTSCSEEEEEEEEEETT--TTEEEEEEEEEECCCTTCCCEEEEEEEETT---------------EEEEEEEESCS
T ss_pred cCCCCccccceeeeecCcc--cCeEcCCceEEEeccCCCcccCceEEEECC---------------EEEEEEccCCC
Confidence 1 122222222333 3444443322 112234689999998752 77787776543
|
| >d1y7ba2 b.67.2.1 (A:4-324) Beta-D-xylosidase N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.02 E-value=6e-09 Score=106.76 Aligned_cols=180 Identities=14% Similarity=0.048 Sum_probs=114.9
Q ss_pred CCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCC------CCCCCcEEeeeEEEecCC
Q 005279 129 NWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQ------WYDIMGVWTGSATILPDG 202 (704)
Q Consensus 129 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~------~yD~~Gv~SGSavv~~dG 202 (704)
|+.-||. +++++|.|+||+...... ..+.-++|+||+||+.++.+|.... ..+..++|...++ ..+|
T Consensus 8 ~~~aDP~-v~~~~~~yY~~~tt~~~~-----~gi~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~-~~~g 80 (321)
T d1y7ba2 8 GFNPDPS-ICRADTDYYIATSTFEWF-----PGVQIHHSKDLVNWHLVAHPLNRTSLLDMKGNPNSGGIWAPDLS-YHDG 80 (321)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBTEE-----SBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEE-EETT
T ss_pred CCCCCCE-EEEECCEEEEEEecCCCC-----CCeEEEECCCccCCEEccccccCCcccccCCCcccCcccCceEE-EECC
Confidence 4557997 788999999998643211 1245578999999999987764332 2345679999985 5799
Q ss_pred cEEEEEecccCC----ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecC
Q 005279 203 KLMMLYTGSTNE----SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRIN 278 (704)
Q Consensus 203 ~~~~~YTG~~~~----~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~ 278 (704)
+++|+|+..... ..+.+.+|.+.+.. ..|+.. ..+ .....||.+++ +.+|+.+|+.+....
T Consensus 81 ~yylyys~~~~~~~~~~~~~~~~a~a~~p~----Gp~~~~---~~~-------~~~~~D~~~~~-d~dg~~~~~~~~~~~ 145 (321)
T d1y7ba2 81 KFWLIYTDVKVTDGMWKDCHNYLTTCESVD----GVWSDP---ITL-------NGSGFDASLFH-DNDGKKYLVNMYWDQ 145 (321)
T ss_dssp EEEEEEEEESCCSSSCCCEEEEEEEESSTT----SCCCCC---EEC-------CCSCSCCEEEE-CTTSCEEEEEEEECC
T ss_pred EEEEEEEeeccCCCCccceeeEeeecCCCC----CCcccc---eee-------cccccCCcEEE-EcCCCEEEEEeccCC
Confidence 999999986532 23567788887653 345431 111 12457999655 678888888875431
Q ss_pred -----C-eeEEEEEEeCCCCCcEEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCC
Q 005279 279 -----R-TGITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDD 345 (704)
Q Consensus 279 -----~-~G~~llY~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~ 345 (704)
. .++.+...+.|..+..-..............|.|.+|+-++ +++|..|...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~g---------------~yyl~~s~~~ 203 (321)
T d1y7ba2 146 RTYNHNFYGIVLQEYSDKEKKLIGKAKIIYKGTDIKYTEGPHIYHIGD---------------YYYLFTAEGG 203 (321)
T ss_dssp CTTSCSEEEEEEEEEETTTTEEEEEEEEEECCCTTCCCEEEEEEEETT---------------EEEEEEEESC
T ss_pred CccccCccceeeEeeCCCcceEcCCceEEeeccCCCccccceEEEECC---------------EEEEEEcCCC
Confidence 1 23444445667655543333322222233679999998642 6777776543
|
| >d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: TM1225-like predicted glycosylases domain: Hypothetical protein TM1225 species: Thermotoga maritima [TaxId: 2336]
Probab=98.99 E-value=1.1e-09 Score=114.65 Aligned_cols=125 Identities=14% Similarity=0.109 Sum_probs=94.4
Q ss_pred eCCCcceeecc-cccccCCCCCCCcEEeeeEEEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceec
Q 005279 167 SKDLIHWYHLP-LAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLV 245 (704)
Q Consensus 167 S~DLvhW~~lp-~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~ 245 (704)
|++++ |++.. +.|.|+..+....||.++|+. .+|+++|+|.+....+...+++|+|.|+ +||+|.+ .||+.
T Consensus 21 ~~~~~-~R~~~NPil~~~~~~~~~~vfNp~~i~-~~g~~~ll~r~~~~~~~~~ig~A~S~DG-----i~w~~~~-~pv~~ 92 (327)
T d1vkda_ 21 YTGPV-WRYSKNPIIGRNPVPKGARVFNSAVVP-YNGEFVGVFRIDHKNTRPFLHFGRSKDG-----INWEIEP-EEIQW 92 (327)
T ss_dssp CCSSE-EECTTCCSBCBSCSTTEEEEEEEEEEE-ETTEEEEEEEEEETTSCEEEEEEEESSS-----SSCEECS-SCCCE
T ss_pred CCCCc-eecCCCccccCCCCcchhceeccEEEE-ECCEEEEEEEecCCCCceEEEEEEcCCc-----cCCEeCC-CCeec
Confidence 44443 44332 567887766678899998864 7999999999877767788999999995 8999975 67776
Q ss_pred CCC---CCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCcEEecceec
Q 005279 246 PPP---GIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLH 302 (704)
Q Consensus 246 ~p~---g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~S~Dl~~W~~~~~l~~ 302 (704)
+.. .++...++||.|++ .+++|||++.+.. +...+.+++|+|+++|+..+.+..
T Consensus 93 p~~~~~~~~~~gv~DPrv~~--~~d~yym~yt~~~-~~~~i~lA~S~D~~~w~k~g~~~~ 149 (327)
T d1vkda_ 93 VDVNGEPFQPSYAYDPRVVK--IEDTYYITFCTDD-HGPTIGVGMTKDFKTFVRLPNAYV 149 (327)
T ss_dssp ECTTSCBCCCSSEEEEEEEE--ETTEEEEEEEEES-SSEEEEEEEESSSSSEEEECCSSS
T ss_pred CCCCCcccccCcEEcceEEE--ECCEEEEEEEecC-CCcEEEEEEecCcchheecCCccC
Confidence 432 23456789999765 4689999988764 334677899999999999887643
|
| >d2exha2 b.67.2.1 (A:3-324) Beta-D-xylosidase N-terminal domain {Geobacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Geobacillus stearothermophilus [TaxId: 1422]
Probab=98.94 E-value=2.7e-07 Score=94.70 Aligned_cols=181 Identities=14% Similarity=0.076 Sum_probs=112.5
Q ss_pred CCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCC------CCCCCcEEeeeEEEecCC
Q 005279 129 NWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQ------WYDIMGVWTGSATILPDG 202 (704)
Q Consensus 129 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~------~yD~~Gv~SGSavv~~dG 202 (704)
++.-||. +++++|.||||+-... +...+..++|+||+||+..+.+|.... ..+..++|.+.+. ..+|
T Consensus 9 ~~~aDP~-v~~~~~~yY~~~tt~~-----~~~g~~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~WAPev~-~~~G 81 (322)
T d2exha2 9 GFHPDPS-ICRVGDDYYIAVSTFE-----WFPGVRIYHSKDLKNWRLVARPLNRLSQLNMIGNPDSGGVWAPHLS-YSDG 81 (322)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBT-----EESBCEEEEESSSSSCEEEECCBCSTTTCCCTTCCTTCBBCSCEEE-EETT
T ss_pred CCCCCCE-EEEECCEEEEEEcCCC-----CCCCcEEEECCCcCCcEEcccccccccccccCCCcccCCcccceEE-EECC
Confidence 6678997 7889999999985221 112345679999999999887764322 2345679999985 5799
Q ss_pred cEEEEEecccCC----ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecC
Q 005279 203 KLMMLYTGSTNE----SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRIN 278 (704)
Q Consensus 203 ~~~~~YTG~~~~----~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~ 278 (704)
+++|+|+..... ......+|.+.+.. ..|++ |+... ....||.+++ ..+|+.||+.+....
T Consensus 82 ~yylyys~~~~~~~~~~~~~~~~~~sd~~~----gp~~~----~~~~~------~~~~dp~~f~-d~dG~~Yl~~~~~~~ 146 (322)
T d2exha2 82 KFWLIYTDVKVVEGQWKDGHNYLVTCDTID----GAWSD----PIYLN------SSGFDPSLFH-DEDGRKYLVNMYWDH 146 (322)
T ss_dssp EEEEEEEEECCCSSSCCCEEEEEEEESSTT----SCCCC----CEECC------CSCSCCEEEE-CTTSCEEEEEEEECC
T ss_pred EEEEEEEeecccCCCccccceEEEecCCCC----CCccc----ceEec------CCCCCCCeEE-EcCCCEEEEecccCC
Confidence 999999976431 12344566665532 34432 33321 2356999655 679999999876532
Q ss_pred ---CeeEEEEE-EeCCCCCcEEecceec--cCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCC
Q 005279 279 ---RTGITFVY-DTKDFINYELLRGVLH--GVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDD 346 (704)
Q Consensus 279 ---~~G~~llY-~S~Dl~~W~~~~~l~~--~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~ 346 (704)
..+...++ ...+...++..+.... ........|.|.+|+.++ +++|..|....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~g---------------~YYl~~s~~~~ 205 (322)
T d2exha2 147 RVDHHPFYGIVLQEYSVEQKKLVGEPKIIFKGTDLRITEGPHLYKING---------------YYYLLTAEGGT 205 (322)
T ss_dssp CTTSCSEEEEEEEEEETTTTEEEEEEEEEECCCTTCCCEEEEEEEETT---------------EEEEEEEESCS
T ss_pred ccCcCCccceEEeeecCcCCeECCCcEEEEEecCCCcccCcEEEEECC---------------EEEEEEeCCCC
Confidence 11111112 2234455666554322 112234689999998752 77888776543
|
| >d1uv4a1 b.67.2.1 (A:3-293) Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Endo-1,5-arabinanase species: Bacillus subtilis [TaxId: 1423]
Probab=98.04 E-value=3.4e-05 Score=77.54 Aligned_cols=144 Identities=15% Similarity=0.170 Sum_probs=85.0
Q ss_pred ceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcc--eeecccccccCCCCCCCcEEeeeEEEecCCcEEEEEecccCC
Q 005279 137 PVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIH--WYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNE 214 (704)
Q Consensus 137 ~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvh--W~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~ 214 (704)
+.+++|+|||||..+..+ .+....++|+|+|+.. |+..+..+.+....+ ......++++++||+.+|+|.....
T Consensus 76 v~~~~g~yylyy~~~~~~--~~~~~i~~a~s~~~~~Gpw~~~~~~~~~~~~~~-~~~iDp~vf~D~dG~~Y~~~~~~~~- 151 (291)
T d1uv4a1 76 IQYYNGKYWLYYSVSSFG--SNTSAIGLASSTSISSGGWKDEGLVIRSTSSNN-YNAIDPELTFDKDGNPWLAFGSFWS- 151 (291)
T ss_dssp EEEETTEEEEEEEECCTT--CSCEEEEEEEESCTTTTCCEEEEEEEEECTTSS-SCCCSCEEEECTTSCEEEEECBSTT-
T ss_pred EEEECCEEEEEEEecCCC--CCcceEEEEEeCCCCCCCCCcCccccccccCCC-CCccCceEEEecCCcEEEEecccCC-
Confidence 688899999999876443 2356789999999876 988765444433222 2345788888889999999965322
Q ss_pred ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec--C--Cee-EEEEEEeC
Q 005279 215 SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI--N--RTG-ITFVYDTK 289 (704)
Q Consensus 215 ~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~--~--~~G-~~llY~S~ 289 (704)
. +.++..... . ...... ...+...+.. ..-+--|.+ + +.+|+|||++.+.. + ..+ .+.+++|+
T Consensus 152 ~---i~i~~l~~~--~--~~~~g~-~~~i~~~~~~--~~~~EgP~i-~-k~~g~Yyl~~S~~~~~~~~~~~y~v~~~~s~ 219 (291)
T d1uv4a1 152 G---IKLTKLDKS--T--MKPTGS-LYSIAARPNN--GGALEAPTL-T-YQNGYYYLMVSFDKCCDGVNSTYKIAYGRSK 219 (291)
T ss_dssp C---EEEEEECTT--T--CSEEEE-EEEEECCTTT--TTCEEEEEE-E-EETTEEEEEEEEECSSSSSCCEEEEEEEEES
T ss_pred c---eEEEeeccc--c--ccCcCc-eeEEEecCCC--CccccccEE-E-EECCEEEEEEecCcccCCCCCCceeEEEEcC
Confidence 2 233333221 1 111111 1122322211 112234874 4 46899999987653 1 112 56678898
Q ss_pred CCCC-cEE
Q 005279 290 DFIN-YEL 296 (704)
Q Consensus 290 Dl~~-W~~ 296 (704)
++.. |+.
T Consensus 220 ~~~GP~~~ 227 (291)
T d1uv4a1 220 SITGPYLD 227 (291)
T ss_dssp STTCCCBC
T ss_pred CCCCCCcc
Confidence 8654 543
|
| >d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Beta-fructosidase (invertase), N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=97.72 E-value=0.00033 Score=70.99 Aligned_cols=152 Identities=13% Similarity=0.152 Sum_probs=99.3
Q ss_pred CCCCCcccccccccceeecCCCCccCCCc-----ceEECCEEEEEEeeCCC--CCCCCCcEEEEEEeCCCcceeecc--c
Q 005279 108 YPWTNNMLSWQRTAFHFQPQKNWMNDPNG-----PVFYKGWYHLFYQYNPN--GAIWGDIVWGHAVSKDLIHWYHLP--L 178 (704)
Q Consensus 108 ~~~~~~~~~w~Rp~~Hf~P~~gWmNDPNG-----~~y~~G~YHLFYQ~nP~--~~~wG~~~WGHAvS~DLvhW~~lp--~ 178 (704)
..-+..+.+|.+-..=+.|.. |..| .+..+|++++||-.+-. ........-.+|+|+|+++|+..+ +
T Consensus 48 Ha~S~Dlv~W~~~~~al~p~~----d~~g~~sGsav~~~g~~~~~yT~~~~~~~~~~~~~~~~~a~s~dg~~w~k~~~np 123 (294)
T d1uypa2 48 HAVSDDLVHWRHLPVALYPDD----ETHGVFSGSAVEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKYDGNP 123 (294)
T ss_dssp EEEESSSSSCEEEEEEECCSS----TTEEEEEEEEEEETTEEEEEEEEEECCCSSCCCEEEEEEEEESSSSCCEECTTCC
T ss_pred EEEeCCcCCeEECCccccccc----CCCCeEEEEEEecCCeEEEEEEEeeCCCCCCcceeeeEEEECCCCCceEeecCCc
Confidence 344667888876554455543 5555 34579999999975422 222224566889999999999763 3
Q ss_pred ccccCCCCCCCcEEeeeEEEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCC
Q 005279 179 AMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDP 258 (704)
Q Consensus 179 AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP 258 (704)
.|.+.......+.-...+ ...+|+++|++.+...+..-...+..|+| |++|+.. .++.....+ ..+--|
T Consensus 124 vi~~~~~~~~~~fRDP~V-~~~~g~w~M~~g~~~~~~~G~i~ly~S~D-----l~~W~~~--g~l~~~~~~---~~~ECP 192 (294)
T d1uypa2 124 VISKPPEEGTHAFRDPKV-NRSNGEWRMVLGSGKDEKIGRVLLYTSDD-----LFHWKYE--GAIFEDETT---KEIECP 192 (294)
T ss_dssp SBCSCSSTTEEEEEEEEE-EEETTEEEEEEEEEETTTEEEEEEEEESS-----SSSEEEE--EEEEEETTC---SCEEEE
T ss_pred eecCCCccCccccCCCcc-cccCCEEEEEEEeeecCCccEEEEEEcCC-----ccceeEe--ccceeCCCC---Cceeec
Confidence 444433333345567776 45799999999876655555677888887 5899875 466553322 234567
Q ss_pred eeEEecCCCeEEEEEeee
Q 005279 259 TTAWLTSEGKWRIAIGSR 276 (704)
Q Consensus 259 ~Vvw~~~~g~w~Mv~Gs~ 276 (704)
- ++ +-+++|+|+++..
T Consensus 193 d-lf-~l~~~~vl~~s~~ 208 (294)
T d1uypa2 193 D-LV-RIGEKDILIYSIT 208 (294)
T ss_dssp E-EE-EETTEEEEEEEET
T ss_pred e-EE-EeCCeeEEEEEec
Confidence 7 44 4688999998754
|
| >d1gyha_ b.67.2.1 (A:) alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: alpha-L-arabinanase species: Cellvibrio cellulosa [TaxId: 155077]
Probab=97.53 E-value=0.00017 Score=72.15 Aligned_cols=149 Identities=14% Similarity=0.100 Sum_probs=80.7
Q ss_pred ceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCC----CcceeecccccccCCCCCCCcEEeeeEEEecCCcEEEEEeccc
Q 005279 137 PVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKD----LIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGST 212 (704)
Q Consensus 137 ~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~D----LvhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~ 212 (704)
+++++|+|||||-....+.....+..+.+.+.+ ..+|+..+..+......+......+++++++||+.+|+|....
T Consensus 69 v~~~~g~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iDp~v~~d~dG~~Yl~~~~~~ 148 (318)
T d1gyha_ 69 IYQHKGLFYLYYSVSAFGKNTSAIGVTVNKTLNPASPDYRWEDKGIVIESVPQRDLWNAIAPAIIADDHGQVWMSFGSFW 148 (318)
T ss_dssp EEEETTEEEEEEEECCTTSCCEEEEEEEESCSCTTSTTCCCEEEEEEEEECTTTCSSCCCCCEEEECTTSCEEEEECBST
T ss_pred EEEEcCceEEEEEEecCCCcccceeEEEEeccCCCccccccccCceecccCCCCCCCceEccceEeecCCcEEEeccCCC
Confidence 578899999999887655433334444444432 4789988766544433333334567887888999999987543
Q ss_pred CCceeeEEEEEeCCC-C---CC-ccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec-C----CeeE
Q 005279 213 NESVQVQNLAYPADP-S---DP-LLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI-N----RTGI 282 (704)
Q Consensus 213 ~~~~q~q~lA~S~D~-~---D~-~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~-~----~~G~ 282 (704)
.. +.++...+. . .+ .+....+. ..+++....+....-+-.|.+ + +.+|+|+|++.+.. . ....
T Consensus 149 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~EgP~i-~-k~~g~yyl~yS~~~~~~~~~~~y~ 221 (318)
T d1gyha_ 149 GG----LKLFKLNDDLTRPAEPQEWHSIAKL-ERSVLMDDSQAGSAQIEAPFI-L-RKGDYYYLFASWGLCCRKGDSTYH 221 (318)
T ss_dssp TC----EEEEEBCTTSSSBCSSCCEEEEECC-CCCTTSCTTSCCSCCEEEEEE-E-EETTEEEEEEEESCCSCGGGCCCE
T ss_pred CC----eeeEecCccceeecccccccccccc-ccceeeccCCCCCceeecCEE-E-EECCEEEEEEecCCCCCCCcccce
Confidence 21 222222211 0 00 01111111 122222222222223346874 4 46899999987642 1 1235
Q ss_pred EEEEEeCCCC
Q 005279 283 TFVYDTKDFI 292 (704)
Q Consensus 283 ~llY~S~Dl~ 292 (704)
+.+++|+++.
T Consensus 222 ~~~~~s~~~~ 231 (318)
T d1gyha_ 222 LVVGRSKQVT 231 (318)
T ss_dssp EEEEEESSTT
T ss_pred eeeecccCCC
Confidence 6667777754
|
| >d2b4wa1 b.67.2.5 (A:2-311) Hypothetical protein LmjF10.1260 {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: LmjF10.1260-like domain: Hypothetical protein LmjF10.1260 species: Leishmania major [TaxId: 5664]
Probab=97.33 E-value=0.00062 Score=69.43 Aligned_cols=140 Identities=11% Similarity=0.029 Sum_probs=96.0
Q ss_pred CCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCCCCcEEeeeEEEecCCcEEEEEeccc
Q 005279 133 DPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGST 212 (704)
Q Consensus 133 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~ 212 (704)
.|..++.++|+|||+++-.... .|...+-+.+.+.+..+|+..|. | .-|+-...++. .+|+++|-||...
T Consensus 31 N~~apf~~~Gk~~l~~RvE~rd-~~s~s~v~lf~~~g~~~f~~~~~---p-----~~glEDPrvt~-i~g~lv~~~t~~~ 100 (310)
T d2b4wa1 31 NCSVPFSYKGKTHIYGRVEKRD-IWAASHVRLFEETGKDEFTAVPE---L-----SWELEDPYIAK-INNEMIFGGTRVR 100 (310)
T ss_dssp SCCCCEEETTEEEEEEEEECTT-CSSCCEEEEEEEEETTEEEECTT---C-----CBSCEEEEEEE-ETTEEEEEEEEEC
T ss_pred cCCcEEEECCEEEEEEEEEccC-cceEEEEEEEEecCCcceEECCc---c-----cccCCCCCEEe-ECCEEEEEEEEec
Confidence 4777789999999999988654 45667777889999999987652 2 12778888875 6899999999876
Q ss_pred CCceeeEEEEEeCCCCCCccceeEeeCCCceec-CCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCC
Q 005279 213 NESVQVQNLAYPADPSDPLLIKWVKYPGNPVLV-PPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDF 291 (704)
Q Consensus 213 ~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~-~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~S~Dl 291 (704)
... ...++|++.+ +++|.+. -|++. .|++. +|=. +....+|+|.|+.--+....|.+.+-.++||
T Consensus 101 ~~~-~~~~~~~t~~-----~r~~~~~--l~~f~~gp~~~-----Kdi~-L~e~~dGKy~~ftRP~~g~~g~Ig~~~~d~l 166 (310)
T d2b4wa1 101 KNG-NAILSYYGYF-----YRGTPDE--LTYFTRGPGCM-----KDIR-VLQLQDGRLGVFSRPRVGRKASIGFVILNSI 166 (310)
T ss_dssp ------CCCEEEEE-----EEEETTE--EEEEEECCTTC-----CCCE-EEECTTSCEEEEECCCC---CCEEEEEESCG
T ss_pred CCC-CcceEEEeee-----eecchhc--CceeecCCCcc-----ccEE-eEEeeCCEEEEEEccccCCCCeeEEEEeCCh
Confidence 532 4456777665 3666543 46654 44432 4444 3345799999998665545567778889999
Q ss_pred CCcEE
Q 005279 292 INYEL 296 (704)
Q Consensus 292 ~~W~~ 296 (704)
.+|+.
T Consensus 167 ~~~t~ 171 (310)
T d2b4wa1 167 DELGA 171 (310)
T ss_dssp GGCSH
T ss_pred hhCCH
Confidence 99984
|
| >d2exha2 b.67.2.1 (A:3-324) Beta-D-xylosidase N-terminal domain {Geobacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Geobacillus stearothermophilus [TaxId: 1422]
Probab=96.62 E-value=0.019 Score=57.52 Aligned_cols=148 Identities=11% Similarity=0.138 Sum_probs=77.0
Q ss_pred CccCCCcceEECCEEEEEEeeCCCC-CCCCCcEEEEEEeCCCc-ceeecccccccCCCCCCCcEEeeeEEEecCCcEEEE
Q 005279 130 WMNDPNGPVFYKGWYHLFYQYNPNG-AIWGDIVWGHAVSKDLI-HWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMML 207 (704)
Q Consensus 130 WmNDPNG~~y~~G~YHLFYQ~nP~~-~~wG~~~WGHAvS~DLv-hW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~ 207 (704)
.+--|. +.|++|+|||||-..... ..+.+.+-..++|++.- -|++ +..+.. .....+.++++||+.+|+
T Consensus 70 ~~WAPe-v~~~~G~yylyys~~~~~~~~~~~~~~~~~~sd~~~gp~~~-~~~~~~-------~~~dp~~f~d~dG~~Yl~ 140 (322)
T d2exha2 70 GVWAPH-LSYSDGKFWLIYTDVKVVEGQWKDGHNYLVTCDTIDGAWSD-PIYLNS-------SGFDPSLFHDEDGRKYLV 140 (322)
T ss_dssp BBCSCE-EEEETTEEEEEEEEECCCSSSCCCEEEEEEEESSTTSCCCC-CEECCC-------SCSCCEEEECTTSCEEEE
T ss_pred Ccccce-EEEECCEEEEEEEeecccCCCccccceEEEecCCCCCCccc-ceEecC-------CCCCCCeEEEcCCCEEEE
Confidence 344574 788999999999754432 22223333445555543 4543 222211 123456777889999999
Q ss_pred EecccCC--ceeeEEEEEeC-CCCCCccceeEeeCCCceec-CCCCCCCcCccCCeeEEecCCCeEEEEEeeec-CCeeE
Q 005279 208 YTGSTNE--SVQVQNLAYPA-DPSDPLLIKWVKYPGNPVLV-PPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI-NRTGI 282 (704)
Q Consensus 208 YTG~~~~--~~q~q~lA~S~-D~~D~~l~~W~K~~~nPVl~-~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~-~~~G~ 282 (704)
|.+.... .....++.... +. ..++.. +.|... ...+ ...+--|++ + +.+|+|||++.... +..-+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~--~~~~Egp~i-~-k~~g~YYl~~s~~~~~~~y~ 210 (322)
T d2exha2 141 NMYWDHRVDHHPFYGIVLQEYSV-----EQKKLV-GEPKIIFKGTD--LRITEGPHL-Y-KINGYYYLLTAEGGTRYNHA 210 (322)
T ss_dssp EEEECCCTTSCSEEEEEEEEEET-----TTTEEE-EEEEEEECCCT--TCCCEEEEE-E-EETTEEEEEEEESCSSTTCE
T ss_pred ecccCCccCcCCccceEEeeecC-----cCCeEC-CCcEEEEEecC--CCcccCcEE-E-EECCEEEEEEeCCCCCCCce
Confidence 8765432 11112222221 11 112221 233332 1111 123356884 4 46899999987643 22236
Q ss_pred EEEEEeCCCCC-cEE
Q 005279 283 TFVYDTKDFIN-YEL 296 (704)
Q Consensus 283 ~llY~S~Dl~~-W~~ 296 (704)
+.+++|+++.. |+.
T Consensus 211 v~~~rS~~~~GP~~~ 225 (322)
T d2exha2 211 ATIARSTSLYGPYEV 225 (322)
T ss_dssp EEEEEESSTTCCCEE
T ss_pred EEEEEeCCCCccccc
Confidence 77889988653 543
|
| >d1wl7a1 b.67.2.1 (A:2-313) Arabinanase-TS {Bacillus thermodenitrificans [TaxId: 33940]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Arabinanase-TS species: Bacillus thermodenitrificans [TaxId: 33940]
Probab=96.38 E-value=0.013 Score=58.22 Aligned_cols=142 Identities=15% Similarity=0.190 Sum_probs=78.7
Q ss_pred ceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCC------CcceeecccccccCCCCCCCcEEeeeEEEecCCcEEEEEec
Q 005279 137 PVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKD------LIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTG 210 (704)
Q Consensus 137 ~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~D------LvhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG 210 (704)
++|++|+|||||..+..+ .+....+.+++.- ...|+..+..+.+... +.......+.+.+.||+.+++|.+
T Consensus 87 v~~~~g~yyl~~t~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~iD~~~f~d~dG~~y~~~~~ 163 (312)
T d1wl7a1 87 ICFYNGIYYLYYSVSTFG--KNTSVIGLATNRTLDPRDPDYEWKDMGPVIHSTAS-DNYNAIDPNVVFDQEGQPWLSFGS 163 (312)
T ss_dssp EEEETTEEEEEEEECCTT--CCCEEEEEEEESCSCTTSTTCCCEEEEEEEEECTT-SSSCCCSCEEEECTTSCEEEEECB
T ss_pred EEEeCCEEEEEEEeecCC--cccceeeEEEEecccCCCCccccccccceecCCCC-CCCCcCCCceeEccCCcEEEeecC
Confidence 688899999999987654 2344455555332 2456665544333321 233456677878889999999876
Q ss_pred ccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec-----CCeeEEEE
Q 005279 211 STNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI-----NRTGITFV 285 (704)
Q Consensus 211 ~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~-----~~~G~~ll 285 (704)
.... ..++...+.. .+... +...+..+..+....-+--|.+ + +.+|+|||++.+.. +...++.+
T Consensus 164 ~~~~----i~~~~l~~d~----~~~~~-~~~~i~~~~~~~~~~~~EgP~v-~-k~~g~yYl~ys~~~~~~~~~~~~~~~~ 232 (312)
T d1wl7a1 164 FWSG----IQLIQLDTET----MKPAA-QAELLTIASRGEEPNAIEAPFI-V-CRNGYYYLFVSFDFCCRGIESTYKIAV 232 (312)
T ss_dssp STTC----EEEEEBCTTT----CSBCT-TCCCEEEECCSSSSCCEEEEEE-E-EETTEEEEEEEESCCSSGGGCCCEEEE
T ss_pred CCCc----eeEEEEcCcC----CcCcC-CceEEEecccCCCCCcccccEE-E-EECCcEEEEEecCCCcCCCCCCceEEE
Confidence 4321 2233222210 11111 1123332222222223346884 4 46899999987642 12336778
Q ss_pred EEeCCCC
Q 005279 286 YDTKDFI 292 (704)
Q Consensus 286 Y~S~Dl~ 292 (704)
++|+++.
T Consensus 233 a~s~~~~ 239 (312)
T d1wl7a1 233 GRSKDIT 239 (312)
T ss_dssp EEESSTT
T ss_pred EecCCCC
Confidence 8888865
|
| >d1yrza2 b.67.2.1 (A:1004-1320) Beta-D-xylosidase N-terminal domain {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Bacillus halodurans [TaxId: 86665]
Probab=95.96 E-value=0.035 Score=55.22 Aligned_cols=138 Identities=13% Similarity=0.015 Sum_probs=76.8
Q ss_pred CccCCCcceE-ECCEEEEEEeeCCCCCCCCC--cEEEEEEeCCCcceeecccccccCCCCCCCcEEeeeEEEecCCcEEE
Q 005279 130 WMNDPNGPVF-YKGWYHLFYQYNPNGAIWGD--IVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMM 206 (704)
Q Consensus 130 WmNDPNG~~y-~~G~YHLFYQ~nP~~~~wG~--~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~ 206 (704)
+.-||. +++ .+|+.+|+|........... .-+....+.|...-...+..+... ...++..|..++..+|+++|
T Consensus 123 ~~iDp~-~f~D~dG~~Yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Egp~i~k~~g~yyl 198 (317)
T d1yrza2 123 SGFDPS-LFHDDDGRKWLVNMIWDYRKGNHPFAGIILQEYSEAEQKLVGPVKNIYKG---TDIQLTEGPHLYKKDGYYYL 198 (317)
T ss_dssp SCSCCE-EEECTTSCEEEEEEEECCCTTSCSEEEEEEEEEETTTTEEEEEEEEEECC---CTTCCCEEEEEEEETTEEEE
T ss_pred CccCCc-EEEecCCCEEEEEeccCcCCCCccccceeeeecCcccCeEcCCceEEEec---cCCCcccCceEEEECCEEEE
Confidence 345886 444 47887777754333221111 112223345544332222222221 13456788888889999999
Q ss_pred EEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCC--CCCcCccCCeeEEecCCCeEEEEEeee
Q 005279 207 LYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPG--IGAKDFRDPTTAWLTSEGKWRIAIGSR 276 (704)
Q Consensus 207 ~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g--~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~ 276 (704)
+|.+......-.+++|+|++. +..|++.+.+|++..... .....-.-.. +...++|+|+|+.-+.
T Consensus 199 ~~s~~~~~~~y~v~~~~s~~~----~Gp~~~~~~~p~~~~~~~~~~~~~g~GH~s-~~~~~dG~~~~~~h~~ 265 (317)
T d1yrza2 199 LVAEGGTEYEHAATLARSQSI----DGPYETDPSYPLVTSTGQPELALQKAGHGS-LVETQNGEWYLAHLCG 265 (317)
T ss_dssp EEEESCSSTTCEEEEEEESST----TCCCEECTTCCSEECTTCTTCSSEEEEEEE-EEECTTSCEEEEEEEE
T ss_pred EEccCCCCCcceEEEEEECCC----CCccccCCCcceeccCCCCcCCcccCCccE-EEECCCCeEEEEEEEe
Confidence 999765433345788998764 357888888999864211 1111111233 3445678888876543
|
| >d1y7ba2 b.67.2.1 (A:4-324) Beta-D-xylosidase N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Clostridium acetobutylicum [TaxId: 1488]
Probab=95.90 E-value=0.031 Score=55.46 Aligned_cols=139 Identities=9% Similarity=-0.065 Sum_probs=83.1
Q ss_pred CCccCCCcceEECCEEEEEEeeCCCCCCCCC--cEEEEEEeCCCcceeecccccccCCCCCCCcEEeeeEEEecCCcEEE
Q 005279 129 NWMNDPNGPVFYKGWYHLFYQYNPNGAIWGD--IVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMM 206 (704)
Q Consensus 129 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~--~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~ 206 (704)
...-||+-++-.+|+.+++|-....+...+. .......+.|+.+....+..+.... ......|..++..+|.++|
T Consensus 121 ~~~~D~~~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~Egp~v~k~~g~yyl 197 (321)
T d1y7ba2 121 GSGFDASLFHDNDGKKYLVNMYWDQRTYNHNFYGIVLQEYSDKEKKLIGKAKIIYKGT---DIKYTEGPHIYHIGDYYYL 197 (321)
T ss_dssp CSCSCCEEEECTTSCEEEEEEEECCCTTSCSEEEEEEEEEETTTTEEEEEEEEEECCC---TTCCCEEEEEEEETTEEEE
T ss_pred ccccCCcEEEEcCCCEEEEEeccCCCccccCccceeeEeeCCCcceEcCCceEEeecc---CCCccccceEEEECCEEEE
Confidence 3456886444457887777754333333332 2344455788888876665544332 1234567777888999999
Q ss_pred EEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCcc---CCeeEEecCCCeEEEEEeee
Q 005279 207 LYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFR---DPTTAWLTSEGKWRIAIGSR 276 (704)
Q Consensus 207 ~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fR---DP~Vvw~~~~g~w~Mv~Gs~ 276 (704)
+|+.........+.+|+|++. +..|++.+++|++.....-. ..+. -.. +...++|+|+|+.-+.
T Consensus 198 ~~s~~~~~~~y~~~~~rs~~~----~Gp~~~~~~~p~~~~~~~~~-~~~~g~GH~~-~v~~~~g~~~~~~h~~ 264 (321)
T d1y7ba2 198 FTAEGGTTYEHSETVARSKNI----DGPYEIDPEYPLLTSWHDPR-NSLQKCGHAS-LVHTHTDEWYLAHLVG 264 (321)
T ss_dssp EEEESCSSTTCEEEEEEESST----TCCCEECTTCCSEECTTCTT-CSSEEEEEEE-EEECTTSCEEEEEEEE
T ss_pred EEcCCCCCCCcceEEEEEccc----CCccccCCCCceeeeecCCC-CCcccCCEEE-EEECCCCCEEEEEEee
Confidence 998765433456788888765 36788888899986421100 0011 122 2345677888876543
|
| >d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Levansucrase domain: Levansucrase species: Bacillus subtilis [TaxId: 1423]
Probab=94.09 E-value=0.33 Score=51.13 Aligned_cols=145 Identities=14% Similarity=0.165 Sum_probs=81.2
Q ss_pred ECCEEEEEEeeCCCCCCCCCc----EEEEE-EeCCCccee---ecccccccCC-CCC---------------CCcEEeee
Q 005279 140 YKGWYHLFYQYNPNGAIWGDI----VWGHA-VSKDLIHWY---HLPLAMVADQ-WYD---------------IMGVWTGS 195 (704)
Q Consensus 140 ~~G~YHLFYQ~nP~~~~wG~~----~WGHA-vS~DLvhW~---~lp~AL~Pd~-~yD---------------~~Gv~SGS 195 (704)
.+|+++|||.-+-.... +.. .=+++ .|.+.+.|+ ..++.+.||. .|. ....=...
T Consensus 138 ~DG~~~LfYTg~~~~~~-~~q~i~~a~~~~~~d~~~~~~~~~~~~~~l~~pDG~~Yqt~~q~~~~~~~~~~d~~~fRDP~ 216 (440)
T d1oyga_ 138 SDGKIRLFYTDFSGKHY-GKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPH 216 (440)
T ss_dssp TTSCEEEEEEEEEGGGT-TEEEEEEEEEEEEECSSCEEEEEEEEEEEEECCCSSSBCCHHHHHHHTGGGGTCCCCCEEEE
T ss_pred cCCeEEEEEEeccCCCC-CcceEEEEEEEEeecCCcceeecccCCceeecCCCccceeeecccccCCCCCCCcccccCCc
Confidence 58999999985432211 111 22343 444555543 4456677765 331 12234565
Q ss_pred EEEecCCcEEEEEecccCCc-----------------------------------------eeeEEEEEeCCCCCCccce
Q 005279 196 ATILPDGKLMMLYTGSTNES-----------------------------------------VQVQNLAYPADPSDPLLIK 234 (704)
Q Consensus 196 avv~~dG~~~~~YTG~~~~~-----------------------------------------~q~q~lA~S~D~~D~~l~~ 234 (704)
++ ..+|+.+|+|.|+.... .-.++|++..+ | +.+
T Consensus 217 v~-~~~g~~y~~fegn~~~~~G~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~ng~I~l~~~s~--D--~~~ 291 (440)
T d1oyga_ 217 YV-EDKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELND--D--YTL 291 (440)
T ss_dssp EE-EETTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEEEEEECT--T--SSE
T ss_pred ee-eeCCeEEEEEeccccccccccccchhccccccccccccccccccccccccccccceeccceEEEEEeCC--C--ccc
Confidence 54 56899999999875310 01345565332 1 478
Q ss_pred eEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec-----C---Cee-EEEEEEeCCCC-CcEE
Q 005279 235 WVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI-----N---RTG-ITFVYDTKDFI-NYEL 296 (704)
Q Consensus 235 W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~-----~---~~G-~~llY~S~Dl~-~W~~ 296 (704)
|+.+ .|++..... ...+--|.++ +.+|+|||+..++. + ..+ .+..|.|+.+. .|+.
T Consensus 292 We~~--~pLl~a~~v--~d~~ErP~I~--~~nGKYYLFtss~~~~~a~~~~~~~~~~~~g~Vsdsl~Gpy~P 357 (440)
T d1oyga_ 292 KKVM--KPLIASNTV--TDEIERANVF--KMNGKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYKP 357 (440)
T ss_dssp EEEE--EEEEECTTT--CSCCEEEEEE--EETTEEEEEEEEEGGGCCCTTCCTTCEEEEEEEESSTTCCCEE
T ss_pred ceec--CcceeccCC--CCeEECCEEE--EECCEEEEEEecccccccCCCcCCCCceEEEEECCCCCCCCee
Confidence 9987 588875322 1234568854 46899999887653 1 111 34456676654 4553
|
| >d1w8oa3 b.68.1.1 (A:47-402) Micromonospora sialidase, N-terminal domain {Micromonospora viridifaciens [TaxId: 1881]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Micromonospora sialidase, N-terminal domain species: Micromonospora viridifaciens [TaxId: 1881]
Probab=90.51 E-value=0.83 Score=43.69 Aligned_cols=105 Identities=15% Similarity=0.083 Sum_probs=62.3
Q ss_pred cEE-eeeEEEecCCcEEEEEecccC----CceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEec
Q 005279 190 GVW-TGSATILPDGKLMMLYTGSTN----ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLT 264 (704)
Q Consensus 190 Gv~-SGSavv~~dG~~~~~YTG~~~----~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~ 264 (704)
.+| -.+.+..+||.++++|.+... .....+.+.+|+|+| .+|.+. ..|...+.+.....+.||.++...
T Consensus 19 ~~~RiPslv~~~~G~lla~~~~r~~~~~d~~~~~i~~~rS~D~G----~TWs~~--~~v~~~~~~~~~~~~~~~~~v~~~ 92 (356)
T d1w8oa3 19 PNYRIPALTVTPDGDLLASYDGRPTGIGAPGPNSILQRRSTDGG----RTWGEQ--QVVSAGQTTAPIKGFSDPSYLVDR 92 (356)
T ss_dssp SCEEEEEEEECTTSCEEEEEEECTTSCSTTSCCEEEEEEESSTT----SSCCCC--EEEECCBCSSSCBEEEEEEEEECT
T ss_pred EeeEeCEEEEECCCCEEEEEeeeeCCCCCCCCceEEEEEccCCC----CCCCCC--EEeecCCCCCcccccccceEEEeC
Confidence 356 477777789999999987432 223457788999986 899752 223333333333556788877655
Q ss_pred CCCeEEEEEeeecC---------------CeeEEEEEEeC-CCCCcEEecce
Q 005279 265 SEGKWRIAIGSRIN---------------RTGITFVYDTK-DFINYELLRGV 300 (704)
Q Consensus 265 ~~g~w~Mv~Gs~~~---------------~~G~~llY~S~-Dl~~W~~~~~l 300 (704)
.+|.-++....... ..-.+.+++|+ +.+.|.....+
T Consensus 93 ~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~~~~~ 144 (356)
T d1w8oa3 93 ETGTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGLTWSHRTIT 144 (356)
T ss_dssp TTCCEEEEEEEESSCCTTTCCSCCCTTCTTSCEEEEEEESSTTSSCEEEECG
T ss_pred CCCeEEEEEeeeccCCcccccccCCCCCCcEEEEEEEecCCccccccccccc
Confidence 66754443332210 01134566665 46788875444
|
| >d2b4wa1 b.67.2.5 (A:2-311) Hypothetical protein LmjF10.1260 {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: LmjF10.1260-like domain: Hypothetical protein LmjF10.1260 species: Leishmania major [TaxId: 5664]
Probab=84.39 E-value=3.3 Score=41.14 Aligned_cols=92 Identities=16% Similarity=0.131 Sum_probs=55.5
Q ss_pred ccccccceeecCCCCccCCCcceE-ECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccC-CCCCCCcEEe
Q 005279 116 SWQRTAFHFQPQKNWMNDPNGPVF-YKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVAD-QWYDIMGVWT 193 (704)
Q Consensus 116 ~w~Rp~~Hf~P~~gWmNDPNG~~y-~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd-~~yD~~Gv~S 193 (704)
.|.+-..-|.....+|.|-- ++- .+|+|-||.+ |.. -+.-..|.+.+.||-||+..-+...|- +.++. .-|=
T Consensus 116 ~~~~~l~~f~~gp~~~Kdi~-L~e~~dGKy~~ftR--P~~--g~~g~Ig~~~~d~l~~~t~e~I~~a~~~~~~~~-~~~G 189 (310)
T d2b4wa1 116 GTPDELTYFTRGPGCMKDIR-VLQLQDGRLGVFSR--PRV--GRKASIGFVILNSIDELGAEVIAKAPPLDILSE-NAWG 189 (310)
T ss_dssp EETTEEEEEEECCTTCCCCE-EEECTTSCEEEEEC--CCC-----CCEEEEEESCGGGCSHHHHHTCCEESCC---CEEE
T ss_pred cchhcCceeecCCCccccEE-eEEeeCCEEEEEEc--ccc--CCCCeeEEEEeCChhhCCHHHhhcCcccCcccc-ceec
Confidence 45554455665566788753 322 3899999975 321 124457889999999999765544442 23433 2232
Q ss_pred ee--EEEecCCcEEEEEecccC
Q 005279 194 GS--ATILPDGKLMMLYTGSTN 213 (704)
Q Consensus 194 GS--avv~~dG~~~~~YTG~~~ 213 (704)
|. ++...+|.+.++|-|...
T Consensus 190 ~g~~p~~t~~Gwl~~i~Hg~~~ 211 (310)
T d2b4wa1 190 GVNQAYLLSSGKVGCIGHYSYE 211 (310)
T ss_dssp EEEEEEEETTSCEEEEEEEEEC
T ss_pred CCcCceECCCCeEEEEEeEecc
Confidence 22 234678999899998753
|
| >d3sila_ b.68.1.1 (A:) Salmonella sialidase {Salmonella typhimurium, strain lt2 [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Salmonella sialidase species: Salmonella typhimurium, strain lt2 [TaxId: 90371]
Probab=82.34 E-value=4.1 Score=40.15 Aligned_cols=74 Identities=15% Similarity=0.154 Sum_probs=47.5
Q ss_pred EE-eeeEEEecCCcEEEEEecccC----CceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecC
Q 005279 191 VW-TGSATILPDGKLMMLYTGSTN----ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTS 265 (704)
Q Consensus 191 v~-SGSavv~~dG~~~~~YTG~~~----~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~ 265 (704)
+| ..+.+..++|.+++++.+... ...-.+.+++|.|+| ++|.+. ..|...+.......+.||..++...
T Consensus 32 ~yRiP~L~~~~~G~llA~~e~R~~~~~d~~~~div~~rS~DgG----kTWs~~--~~i~~~~~~~~~~~~~~p~~v~~~~ 105 (379)
T d3sila_ 32 YFRIPAMCTTSKGTIVVFADARHNTASDQSFIDTAAARSTDGG----KTWNKK--IAIYNDRVNSKLSRVMDPTCIVANI 105 (379)
T ss_dssp EEEEEEEEECTTCCEEEEEEEESSCSCSSSCEEEEEEEESSSS----SCCEEE--EEECCCCSCTTTCEEEEEEEEEEEE
T ss_pred eEeccEEEEECCCcEEEEEeeEECCCCCCCCceEEEEEecCCc----cCCCCC--EEccCCCCCccccccCCccEEEECC
Confidence 45 577766789999999976432 122335677999986 999874 2333333222345677998777666
Q ss_pred CCeEE
Q 005279 266 EGKWR 270 (704)
Q Consensus 266 ~g~w~ 270 (704)
+|.-+
T Consensus 106 ~g~~~ 110 (379)
T d3sila_ 106 QGRET 110 (379)
T ss_dssp TTEEE
T ss_pred CCCEE
Confidence 77543
|
| >d2ah2a2 b.68.1.1 (A:1-399) Trypanosoma sialidase {Parasitic flagellate protozoan (Trypanosoma cruzi) [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Trypanosoma sialidase species: Parasitic flagellate protozoan (Trypanosoma cruzi) [TaxId: 5693]
Probab=81.95 E-value=1.5 Score=44.79 Aligned_cols=83 Identities=16% Similarity=0.170 Sum_probs=47.1
Q ss_pred EEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeee
Q 005279 197 TILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSR 276 (704)
Q Consensus 197 vv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~ 276 (704)
+...+|++++=..+........-.+.||+|.| .+|+.-+ ++- +. ....|.+. +.+|+-+|.+...
T Consensus 183 i~~~~GrLv~p~~~~~~~~~~~s~~iySdD~G----~TW~~g~--~~~--~~-----~~~~~~v~--~~dG~lll~~R~~ 247 (399)
T d2ah2a2 183 IVASNGNLVYPVQVTNKKKQVFSKIFYSEDEG----KTWKFGK--GRS--AF-----GCSEPVAL--EWEGKLIINTRVD 247 (399)
T ss_dssp EECTTSCEEEEEEEEETTCCEEEEEEEESSTT----SSCEECS--CCC--CT-----TCEEEEEE--EETTEEEEEEECT
T ss_pred eeecCccEecceEeecCCCceEEEEEEeCCCC----ceeEecc--ccC--CC-----Ccccccee--ccCCeEEEEEecC
Confidence 34678998763322222222333466899986 9999743 221 11 12345543 4578877766432
Q ss_pred cCCeeEEEEEEeCC-CCCcEEe
Q 005279 277 INRTGITFVYDTKD-FINYELL 297 (704)
Q Consensus 277 ~~~~G~~llY~S~D-l~~W~~~ 297 (704)
.|...+|+|.| ...|+..
T Consensus 248 ---~g~r~v~~S~DgG~TW~~~ 266 (399)
T d2ah2a2 248 ---YRRRLVYESSDMGNTWLEA 266 (399)
T ss_dssp ---TSCCCEEEESSTTSSCEEC
T ss_pred ---CCceeEEEEcCCCcccccc
Confidence 24444677766 6899863
|