Citrus Sinensis ID: 005333

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-
MMVRAQTSHPLDPLSAAEISVAVATVRAAGATPEVRDSMRFVEVVRVEPDKQVVALADAYFFPPFQPSLIPRTKGGPIIPTKLPPRRARLVVYNKRSNETSIWVVELSEVHAATRGGHHRGKVISSKVVPDVQPPMDAVEYAECEAVVKDFPPFREAMKKRGIEDMDLVMVDPWCVGYHSDADAPSRRLAKPLIFCRTESDCPIENGYARPVEGIHVLVDMQNMVVIEFEDRKLVHLPPADPLRNYTAGETRGGVDRSDIKPLQIVQPEGPSFRVNGHFVEWQKWNFRIGFTPREGLIIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFAGGVDTIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFICTVANYEYAFFWHFYQDGKIEAEVKLTGILSLGALQPGEVRKYGTIIAPGLYAPVHQHFFVARMDMAVDCKPGEAHNQVVEMNVKVEEPGKNNVHNNAFYAEEELLKSELQAMRDCNPLTARHWIIRNTRTVNRTGQLTGYKLVPGSNCLPLAGSEAKVLRRAAFLKHNLWVTPYAHDEMYPGGEFPNQNPRVGEGLATWVEQNRSLEETDIVLWYVFGVTHIPRLEDWPVMPVDRIGFMLMPHGFFNCSPAVDVPPNESDLDLKDTAIAEKPVQNGLLAKL
cccccccccccccccHHHHHHHHHHHHHHcccccccccEEEEEEEcccccHHHHHHHHccccccccccccccccccccccccccccEEEEEEEEcccccEEEEEEEcccccccccccccccEEEEEEccccccccccHHHHHHHHHHHHccHHHHHHHHHccccccccEEEcccccccccccccccccEEEEEEEEEEccccccccccccccccEEEEEEccccEEEEEEEccccccccccccccccccccccccccccccccEEEcccccEEEEEcEEEEEccEEEEEEEcccccEEEEEEEEEccccccccEEEEEccEEEEEEccccccccccEEEEEccccccccccccccccccccccEEEEEEEEEcccccEEEEccEEEEccccccccccccccccccEEEEEcEEEEEEEEEEcccccEEEEEEEEEccEEEEEEEEEEEEEEEEcccccccccccEEccccccccccEEEEEEEEcccccccccccEEEEEEEEEcccccccccccEEEEEEEEEEccHHHHccccccccccEEEEEcccccccccccEEEEEEccccccccccccHHHHHHHHcccccEEEEEccccccccccccccccccccccHHHHHHcccccccccEEEEEEEEccccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccc
cccccccccccccccHHHHHHHHHHHHHccccccccccEEEEEEEEccccHHHHHHHHHcccccccccccccccccccccccccccEEEEEEEEcccccEEEEEEEEcccEEEEcccccccEEEEcEEcccccccccHHHHHHHHHHHHccHHHHHHHHHcccccccEEEEccccccccccccccccEEEEEEEEEEcccccccccccccccccEEEEEEccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccEEEccEEEEccEEEEEEEEcccEEEEEEEEEEEcccccEEEEEEEEEEEEEEEEccccccccccEEEccccccccccEccccEcccEccccEEEccEEEcccccEEEccccEEEEEEEEEEEEEEEccccccEEEEEEEEEEEEEEEEEccEEEEEEEEEEccccEEEEEEEEEccccEEccccccccccEEEEccEEEEcEEEEEEEEEEEccccccccccEEEEEEEEEEcccEccEcccccEEEEEEEEcEHHHcEEcccHHHccEEEEEEEEEEcccccEEEEEEEEccccccccccccHHHHHcHHHHccEEEEEccccccccccccccccccccccHHHHHccccEcccEcEEEEEEEEEEEcccHHHcccEEEEEEEEEEEEccccccccccccccccccccccHcccccccccccHHHcc
mmvraqtshpldplsAAEISVAVATVRaagatpevrdsMRFVEVVRVEPDKQVVALAdayffppfqpsliprtkggpiiptklpprraRLVVYNKRSNETSIWVVELSEVhaatrgghhrgkvisskvvpdvqppmdavEYAECeavvkdfppfREAMKKRgiedmdlvmvdpwcvgyhsdadapsrrlakplifcrtesdcpiengyarpvegIHVLVDMQNMVViefedrklvhlppadplrnytagetrggvdrsdikplqivqpegpsfrvnghfvewqkwnfrigftpregLIIYSVAYvdgsrgrrpvahrLSFVEMVvpygdpndphyrknafdagedglgknahslKKGCDCLGYIKYFDAhftnfaggvdtiencvclheedhgilwkhqdwrtGLAEVRRSRRLSVSFICTVANYEYAFFWHFYQDGKIEAEVKLTGILslgalqpgevrkygtiiapglyapvhQHFFVARMdmavdckpgeahnQVVEMNVKveepgknnvhnnafYAEEELLKSELQAMrdcnpltarhWIIRntrtvnrtgqltgyklvpgsnclplagSEAKVLRRAAFLKHnlwvtpyahdemypggefpnqnprvgEGLATWVEQNRSLEETDIVLWYVFGvthiprledwpvmpvdrigfmlmphgffncspavdvppnesdldlkdtaiaekpvqngllakl
mmvraqtshpldplsAAEISVAVATVRaagatpevrdsmrfVEVVRVEPDKQVVALADAYFFPpfqpsliprtkggpiiptklpprraRLVVynkrsnetsiWVVELSEVHaatrgghhrgkvisskvvpdvqPPMDAVEYAECEAVVKDFPPFREAMKKRGIEDMDLVMVDPWCVGYHSDADAPSRRLAKPLIFCRTESDCPIENGYARPVEGIHVLVDMQNMVVIEFEDrklvhlppadplrnytagetrggvdrsdikPLQIVQPEGPSFRVNGHFVEWQKWNFRIGFTPREGLIIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFAGGVDTIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFICTVANYEYAFFWHFYQDGKIEAEVKLTGILSLGALQPGEVRKYGTIIAPGLYAPVHQHFFVARMDMAVDCKPGEAHNQVVEMNVKveepgknnvHNNAFYAEEELLKSELQAMRDCNPLtarhwiirntrtvnrtgqltgyklvpgsnCLPLAGSEAKVLRRAAFLKHNLWVTPYAHDEMYPGGEFPNQNPRVGEGLATWVEQNRSLEETDIVLWYVFGVTHIPRLEDWPVMPVDRIGFMLMPHGFFNCSPAVDVPPNESDLDLKDTAiaekpvqngllakl
MMVRAQTSHPLDPLSAAEISvavatvraagatPEVRDSMRFVEVVRVEPDKQVVALADAYFFPPFQPSLIPRTKGGPIIPTKLPPRRARLVVYNKRSNETSIWVVELSEVHAATRGGHHRGKVISSKVVPDVQPPMDAVEYAECEAVVKDFPPFREAMKKRGIEDMDLVMVDPWCVGYHSDADAPSRRLAKPLIFCRTESDCPIENGYARPVEGIHVLVDMQNMVVIEFEDRKLVHLPPADPLRNYTAGETRGGVDRSDIKPLQIVQPEGPSFRVNGHFVEWQKWNFRIGFTPREGLIIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFAGGVDTIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFICTVANYEYAFFWHFYQDGKIEAEVKLTGILSLGALQPGEVRKYGTIIAPGLYAPVHQHFFVARMDMAVDCKPGEAHNQVVEMNVKVEEPGKNNVHNNAFYAEEELLKSELQAMRDCNPLTARHWIIRNTRTVNRTGQLTGYKLVPGSNCLPLAGSEAKVLRRAAFLKHNLWVTPYAHDEMYPGGEFPNQNPRVGEGLATWVEQNRSLEETDIVLWYVFGVTHIPRLEDWPVMPVDRIGFMLMPHGFFNCSPAVDVPPNESDLDLKDTAIAEKPVQNGLLAKL
******************ISVAVATVRAAGATPEVRDSMRFVEVVRVEPDKQVVALADAYFFPPFQPSLIPRTKGGPIIPTKLPPRRARLVVYNKRSNETSIWVVELSEVHAATRGGHHRGKVISSKVVPDVQPPMDAVEYAECEAVVKDFPPFREAMKKRGIEDMDLVMVDPWCVGYHSDADAPSRRLAKPLIFCRTESDCPIENGYARPVEGIHVLVDMQNMVVIEFEDRKLVHLPPADPLRNYT************IKPLQIVQPEGPSFRVNGHFVEWQKWNFRIGFTPREGLIIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDP****YR**AF*****GLGKNAHSLKKGCDCLGYIKYFDAHFTNFAGGVDTIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFICTVANYEYAFFWHFYQDGKIEAEVKLTGILSLGALQPGEVRKYGTIIAPGLYAPVHQHFFVARMDMAVDCKPGEAHNQVVEMNVKV******NVHNNAFYAEEELLKSELQAMRDCNPLTARHWIIRNTRTVNRTGQLTGYKLVPGSNCLPLAGSEAKVLRRAAFLKHNLWVTPYAHDEMYPGGEFPN*NPRVGEGLATWVEQNRSLEETDIVLWYVFGVTHIPRLEDWPVMPVDRIGFMLMPHGFFNCSPAVD****************************
****AQTSHPLDPLSAAEISVAVATVRAAGATPEVRDSMRFVEVVRVEPDKQVVALADAYFFPPFQPSLIPR******IPTKLPPRRARLVVYNKRSNETSIWVVELSEVHAATRGGHHRGKVISSKVVPDVQPPMDAVEYAECEAVVKDFPPFREAMKKRGIEDMDLVMVDPWCVGYHSDADAPSRRLAKPLIFCRTESDCPIENGYARPVEGIHVLVDMQNMVVIEFEDRKLVHLPPADPLRN*********************QPEGPSFRVNGHFVEWQKWNFRIGFTPREGLIIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFAGGVDTIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFICTVANYEYAFFWHFYQDGKIEAEVKLTGILSLGALQPGEVRKYGTIIAPGLYAPVHQHFFVARMDMAVDCKPGEAHNQVVEMNVKVEEPGKNNVHNNAFYAEEELLKSELQAMRDCNPLTARHWIIRNTRTVNRTGQLTGYKLVPGSNCLPLAGS*AKVLRRAAFLKHNLWVTPYAHDEMYPGGEFPNQNPRVGEGLATWVEQNRSLEETDIVLWYVFGVTHIPRLEDWPVMPVDRIGFMLMPHGFFNCSPAVDVP*******************NGLLA**
**********LDPLSAAEISVAVATVRAAGATPEVRDSMRFVEVVRVEPDKQVVALADAYFFPPFQPSLIPRTKGGPIIPTKLPPRRARLVVYNKRSNETSIWVVELSEVHAATRGGHHRGKVISSKVVPDVQPPMDAVEYAECEAVVKDFPPFREAMKKRGIEDMDLVMVDPWCVGYHSDADAPSRRLAKPLIFCRTESDCPIENGYARPVEGIHVLVDMQNMVVIEFEDRKLVHLPPADPLRNYTAGETRGGVDRSDIKPLQIVQPEGPSFRVNGHFVEWQKWNFRIGFTPREGLIIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFAGGVDTIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFICTVANYEYAFFWHFYQDGKIEAEVKLTGILSLGALQPGEVRKYGTIIAPGLYAPVHQHFFVARMDMAVDCKPGEAHNQVVEMNVKVEEPGKNNVHNNAFYAEEELLKSELQAMRDCNPLTARHWIIRNTRTVNRTGQLTGYKLVPGSNCLPLAGSEAKVLRRAAFLKHNLWVTPYAHDEMYPGGEFPNQNPRVGEGLATWVEQNRSLEETDIVLWYVFGVTHIPRLEDWPVMPVDRIGFMLMPHGFFNCSPAVDVPPNESDLDLKDTAIAEKPVQNGLLAKL
*******SHPLDPLSAAEISVAVATVRAAGATPEVRDSMRFVEVVRVEPDKQVVALADAYFFPPFQPSL*PRTKGGPIIPTKLPPRRARLVVYNKRSNETSIWVVELSEVHAATRGGHHRGKVISSKVVPDVQPPMDAVEYAECEAVVKDFPPFREAMKKRGIEDMDLVMVDPWCVGYHSDADAPSRRLAKPLIFCRTESDCPIENGYARPVEGIHVLVDMQNMVVIEFEDRKLVHLPPADPLRNYTAGETRGGVDRSDIKPLQIVQPEGPSFRVNGHFVEWQKWNFRIGFTPREGLIIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFAGGVDTIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFICTVANYEYAFFWHFYQDGKIEAEVKLTGILSLGALQPGEVRKYGTIIAPGLYAPVHQHFFVARMDMAVDCKPGEAHNQVVEMNVKVEEPGKNNVHNNAFYAEEELLKSELQAMRDCNPLTARHWIIRNTRTVNRTGQLTGYKLVPGSNCLPLAGSEAKVLRRAAFLKHNLWVTPYAHDEMYPGGEFPNQNPRVGEGLATWVEQNRSLEETDIVLWYVFGVTHIPRLEDWPVMPVDRIGFMLMPHGFFNCSPAVDVPPN************************
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MMVRAQTSHPLDPLSAAEISVAVATVRAAGATPEVRDSMRFVEVVRVEPDKQVVALADAYFFPPFQPSLIPRTKGGPIIPTKLPPRRARLVVYNKRSNETSIWVVELSEVHAATRGGHHRGKVISSKVVPDVQPPMDAVEYAECEAVVKDFPPFREAMKKRGIEDMDLVMVDPWCVGYHSDADAPSRRLAKPLIFCRTESDCPIENGYARPVEGIHVLVDMQNMVVIEFEDRKLVHLPPADPLRNYTAGETRGGVDRSDIKPLQIVQPEGPSFRVNGHFVEWQKWNFRIGFTPREGLIIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFAGGVDTIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFICTVANYEYAFFWHFYQDGKIEAEVKLTGILSLGALQPGEVRKYGTIIAPGLYAPVHQHFFVARMDMAVDCKPGEAHNQVVEMNVKVEEPGKNNVHNNAFYAEEELLKSELQAMRDCNPLTARHWIIRNTRTVNRTGQLTGYKLVPGSNCLPLAGSEAKVLRRAAFLKHNLWVTPYAHDEMYPGGEFPNQNPRVGEGLATWVEQNRSLEETDIVLWYVFGVTHIPRLEDWPVMPVDRIGFMLMPHGFFNCSPAVDVPPNESDLDLKDTAIAEKPVQNGLLAKL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query701 2.2.26 [Sep-21-2011]
Q07121648 Primary amine oxidase OS= N/A no 0.898 0.972 0.414 1e-141
Q07123648 Copper methylamine oxidas N/A no 0.878 0.950 0.418 1e-140
Q59118684 Histamine oxidase OS=Arth N/A no 0.888 0.910 0.382 1e-119
P46881638 Phenylethylamine oxidase N/A no 0.727 0.799 0.420 1e-112
Q9P7F2712 Copper amine oxidase 1 OS yes no 0.774 0.762 0.363 2e-97
P12807692 Peroxisomal primary amine N/A no 0.893 0.904 0.337 4e-95
Q12556671 Copper amine oxidase 1 OS no no 0.915 0.956 0.344 1e-87
O42890 794 Copper amine oxidase-like no no 0.902 0.797 0.298 2e-78
P49250755 Primary amine oxidase OS= yes no 0.863 0.801 0.291 2e-69
P80695752 Primary amine oxidase OS= yes no 0.867 0.808 0.289 4e-68
>sp|Q07121|AMO1_ARTS1 Primary amine oxidase OS=Arthrobacter sp. (strain P1) GN=maoI PE=1 SV=1 Back     alignment and function desciption
 Score =  501 bits (1290), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 287/693 (41%), Positives = 389/693 (56%), Gaps = 63/693 (9%)

Query: 8   SHPLDPLSAAEISVAVATVRAAGATPEVRDSMRFVEVVRVEPDKQVVALADAYFFPPFQP 67
           SHPLDPLS  EI+ AVA ++     P   +S RF+ V   EP K  +             
Sbjct: 14  SHPLDPLSRVEIARAVAILKEG---PAAAESFRFISVELREPSKDDL------------- 57

Query: 68  SLIPRTKGGPIIPTKLPPRRARLVVYNKRSNETSIWVVELSEVHAATRGGHHRGKVISSK 127
                 + G  +      R A  V+ ++    +   VV+L             G V S K
Sbjct: 58  ------RAGVAVA-----READAVLVDRAQARSFEAVVDLEA-----------GTVDSWK 95

Query: 128 VVPD-VQPPMDAVEYAECEAVVKDFPPFREAMKKRGIEDMDLVMVDPWCVGYHSDADAPS 186
           ++ + +QPP    E+AECE   +  P    A+ KRG+ ++DLV  +PW VGY  + D   
Sbjct: 96  LLAENIQPPFMLDEFAECEDACRKDPEVIAALAKRGLTNLDLVCFEPWSVGYFGE-DNEG 154

Query: 187 RRLAKPLIFCRTESDCPIENGYARPVEGIHVLVDMQNMVVIEFEDRKLVHLPPA--DPLR 244
           RRL + L+F R E+D   ++ YA P+E   V  D+    V+  ED + + +P A  + L 
Sbjct: 155 RRLMRALVFVRDEAD---DSPYAHPIENFIVFYDLNAGKVVRLEDDQAIPVPSARGNYLP 211

Query: 245 NYTAGETRGGVDRSDIKPLQIVQPEGPSFRVNGHFVEWQKWNFRIGFTPREGLIIYSVAY 304
            Y       G  R+D+KPL I QPEG SF V G+ V W  W+FR+GFTPREGL+++ + +
Sbjct: 212 KYV------GEARTDLKPLNITQPEGASFTVTGNHVTWADWSFRVGFTPREGLVLHQLKF 265

Query: 305 VDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYI 364
            D    R PV +R S  EMVVPYGD      +KNAFD+GE  +G  A+SL  GCDCLG I
Sbjct: 266 KDQGVDR-PVINRASLSEMVVPYGDTAPVQAKKNAFDSGEYNIGNMANSLTLGCDCLGEI 324

Query: 365 KYFDAHFTNFAGGVDTIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFICTVAN 424
           KYFD H  +  G   TIEN +C+HEED  ILWKH D+R G AE RRSR+L +SFI TVAN
Sbjct: 325 KYFDGHSVDSHGNPWTIENAICMHEEDDSILWKHFDFREGTAETRRSRKLVISFIATVAN 384

Query: 425 YEYAFFWHFYQDGKIEAEVKLTGILSLGALQPGEVRKYG-TIIAPGLYAPVHQHFFVARM 483
           YEYAF+WH + DG IE  VK TGILS     PGE   YG ++   GLYAP+HQH F  RM
Sbjct: 385 YEYAFYWHLFLDGSIEFLVKATGILSTAGQLPGEKNPYGQSLNNDGLYAPIHQHMFNVRM 444

Query: 484 DMAVDCKPGEAHNQVVEMNVKVEEPGKNNVHNNAFYAEEELLKSELQAMRDCNPLTARHW 543
           D  +D       N V E++++  E   +N    AF A + LL++E +A+R  N    R W
Sbjct: 445 DFELDG----VKNAVYEVDMEYPE---HNPTGTAFMAVDRLLETEQKAIRKTNEAKHRFW 497

Query: 544 IIRNTRTVNRTGQLTGYKLVPGSNCLPLAGSEAKVLRRAAFLKHNLWVTPYAHDEMYPGG 603
            I N  + N   +   Y+L+P +     A  +A V +RA F ++NLWVT Y   E +  G
Sbjct: 498 KIANHESKNLVNEPVAYRLIPTNGIQLAARDDAYVSKRAQFARNNLWVTAYDRTERFAAG 557

Query: 604 EFPNQNPRVGEGLATWVEQNRSLEETDIVLWYVFGVTHIPRLEDWPVMPVDRIGFMLMPH 663
           E+PNQ     +GL  W +++R++ +TD+V+WY FG+ H+ RLEDWPVMP   IGFML PH
Sbjct: 558 EYPNQATGADDGLHIWTQKDRNIVDTDLVVWYTFGMHHVVRLEDWPVMPRQNIGFMLEPH 617

Query: 664 GFFNCSPAVDVPPNESDLDLKDTAIAEKPVQNG 696
           GFFN +P +++P + S      T  A+    NG
Sbjct: 618 GFFNQNPTLNLPTSTS---TTQTGEADTCCHNG 647
The exact function of maoXI is not known.
Arthrobacter sp. (strain P1) (taxid: 47915)
EC: 1EC: .EC: 4EC: .EC: 3EC: .EC: 2EC: 1
>sp|Q07123|AMO2_ARTS1 Copper methylamine oxidase OS=Arthrobacter sp. (strain P1) GN=maoII PE=1 SV=1 Back     alignment and function description
>sp|Q59118|AMOH_ARTGO Histamine oxidase OS=Arthrobacter globiformis PE=1 SV=3 Back     alignment and function description
>sp|P46881|PAOX_ARTGO Phenylethylamine oxidase OS=Arthrobacter globiformis PE=1 SV=1 Back     alignment and function description
>sp|Q9P7F2|CAO1_SCHPO Copper amine oxidase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cao1 PE=1 SV=1 Back     alignment and function description
>sp|P12807|AMO_PICAN Peroxisomal primary amine oxidase OS=Pichia angusta GN=AMO PE=1 SV=1 Back     alignment and function description
>sp|Q12556|AMO1_ASPNG Copper amine oxidase 1 OS=Aspergillus niger GN=AO-I PE=1 SV=2 Back     alignment and function description
>sp|O42890|CAO2_SCHPO Copper amine oxidase-like protein cao2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cao2 PE=3 SV=1 Back     alignment and function description
>sp|P49250|AMO_ENTAE Primary amine oxidase OS=Enterobacter aerogenes GN=maoA PE=1 SV=1 Back     alignment and function description
>sp|P80695|AMO_KLEOK Primary amine oxidase OS=Klebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686) GN=maoA PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query701
356501642760 PREDICTED: copper methylamine oxidase-li 1.0 0.922 0.905 0.0
224107787700 predicted protein [Populus trichocarpa] 0.998 1.0 0.914 0.0
255574009795 copper amine oxidase, putative [Ricinus 0.998 0.880 0.928 0.0
359495915774 PREDICTED: copper methylamine oxidase-li 1.0 0.905 0.922 0.0
255540539797 copper amine oxidase, putative [Ricinus 1.0 0.879 0.902 0.0
356566002764 PREDICTED: primary amine oxidase-like [G 1.0 0.917 0.912 0.0
147779939706 hypothetical protein VITISV_023689 [Viti 0.998 0.991 0.907 0.0
449440642794 PREDICTED: copper methylamine oxidase-li 0.998 0.881 0.872 0.0
449477446791 PREDICTED: copper methylamine oxidase-li 0.998 0.884 0.875 0.0
225456916791 PREDICTED: copper methylamine oxidase-li 1.0 0.886 0.878 0.0
>gi|356501642|ref|XP_003519633.1| PREDICTED: copper methylamine oxidase-like [Glycine max] Back     alignment and taxonomy information
 Score = 1358 bits (3516), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/701 (90%), Positives = 677/701 (96%)

Query: 1   MMVRAQTSHPLDPLSAAEISVAVATVRAAGATPEVRDSMRFVEVVRVEPDKQVVALADAY 60
           +M RAQT HPLDPLSAAEISVAVATVRAAGATPEVRDSMRFVEVV VEPDKQVVALADAY
Sbjct: 60  VMTRAQTCHPLDPLSAAEISVAVATVRAAGATPEVRDSMRFVEVVLVEPDKQVVALADAY 119

Query: 61  FFPPFQPSLIPRTKGGPIIPTKLPPRRARLVVYNKRSNETSIWVVELSEVHAATRGGHHR 120
           FFPPFQPSL+PRTKGGP+IPTKLPPR+ARLVVYNKRSNETSIW+VEL EVHAATRGGHHR
Sbjct: 120 FFPPFQPSLLPRTKGGPLIPTKLPPRKARLVVYNKRSNETSIWIVELREVHAATRGGHHR 179

Query: 121 GKVISSKVVPDVQPPMDAVEYAECEAVVKDFPPFREAMKKRGIEDMDLVMVDPWCVGYHS 180
           GKVISS+VVP+VQPPMDAVEYAECEA VKDFPPFREAMK+RGIEDMDLVMVD WCVGYHS
Sbjct: 180 GKVISSEVVPNVQPPMDAVEYAECEAAVKDFPPFREAMKRRGIEDMDLVMVDAWCVGYHS 239

Query: 181 DADAPSRRLAKPLIFCRTESDCPIENGYARPVEGIHVLVDMQNMVVIEFEDRKLVHLPPA 240
           +ADAPSRRLAKPLIFCRTESDCP+ENGYARPVEGIH+LVDMQNM ++EFEDRKL+ LPPA
Sbjct: 240 EADAPSRRLAKPLIFCRTESDCPMENGYARPVEGIHILVDMQNMEILEFEDRKLIPLPPA 299

Query: 241 DPLRNYTAGETRGGVDRSDIKPLQIVQPEGPSFRVNGHFVEWQKWNFRIGFTPREGLIIY 300
           DPLRNYT+GETRGGVDRSD+KPLQI+QPEGPSFRVNGHF++WQKWNFRIGFTPREGL+IY
Sbjct: 300 DPLRNYTSGETRGGVDRSDVKPLQIIQPEGPSFRVNGHFIQWQKWNFRIGFTPREGLVIY 359

Query: 301 SVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDC 360
           SVAY+DGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDC
Sbjct: 360 SVAYIDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDC 419

Query: 361 LGYIKYFDAHFTNFAGGVDTIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFIC 420
           LGYIKYFDAHFTNF GGV+TIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRL+VSFIC
Sbjct: 420 LGYIKYFDAHFTNFNGGVETIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLTVSFIC 479

Query: 421 TVANYEYAFFWHFYQDGKIEAEVKLTGILSLGALQPGEVRKYGTIIAPGLYAPVHQHFFV 480
           TVANYEY FFWHFYQDGKIEAEVKLTGILSLGALQPGE RKYGT IAPGLYAPVHQHFFV
Sbjct: 480 TVANYEYGFFWHFYQDGKIEAEVKLTGILSLGALQPGESRKYGTTIAPGLYAPVHQHFFV 539

Query: 481 ARMDMAVDCKPGEAHNQVVEMNVKVEEPGKNNVHNNAFYAEEELLKSELQAMRDCNPLTA 540
           ARMDMAVDCKPGEA NQVVE++VK+EEPGKNNVHNNAFYAEE+LLKSE +AMRDCNPL+A
Sbjct: 540 ARMDMAVDCKPGEAFNQVVEVDVKIEEPGKNNVHNNAFYAEEKLLKSESEAMRDCNPLSA 599

Query: 541 RHWIIRNTRTVNRTGQLTGYKLVPGSNCLPLAGSEAKVLRRAAFLKHNLWVTPYAHDEMY 600
           RHWI+RNTRTVNRTGQLTGYKLVPGSNCLPLAGSEAK LRRAAFLKHNLWVTPY   EM+
Sbjct: 600 RHWIVRNTRTVNRTGQLTGYKLVPGSNCLPLAGSEAKFLRRAAFLKHNLWVTPYVPGEMH 659

Query: 601 PGGEFPNQNPRVGEGLATWVEQNRSLEETDIVLWYVFGVTHIPRLEDWPVMPVDRIGFML 660
           PGGEFPNQNPRVGEGLATWV++NRSLEE DIVLWYVFG+THIPRLEDWPVMPV+RIGFML
Sbjct: 660 PGGEFPNQNPRVGEGLATWVQKNRSLEEADIVLWYVFGITHIPRLEDWPVMPVERIGFML 719

Query: 661 MPHGFFNCSPAVDVPPNESDLDLKDTAIAEKPVQNGLLAKL 701
           MPHGFFNCSPAVDVPP+ SDLD K+  ++ KP+QNG++AKL
Sbjct: 720 MPHGFFNCSPAVDVPPSASDLDDKENGMSAKPIQNGMIAKL 760

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224107787|ref|XP_002314600.1| predicted protein [Populus trichocarpa] gi|222863640|gb|EEF00771.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255574009|ref|XP_002527922.1| copper amine oxidase, putative [Ricinus communis] gi|223532697|gb|EEF34479.1| copper amine oxidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359495915|ref|XP_002273532.2| PREDICTED: copper methylamine oxidase-like [Vitis vinifera] gi|296083412|emb|CBI23365.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255540539|ref|XP_002511334.1| copper amine oxidase, putative [Ricinus communis] gi|223550449|gb|EEF51936.1| copper amine oxidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356566002|ref|XP_003551224.1| PREDICTED: primary amine oxidase-like [Glycine max] Back     alignment and taxonomy information
>gi|147779939|emb|CAN62304.1| hypothetical protein VITISV_023689 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449440642|ref|XP_004138093.1| PREDICTED: copper methylamine oxidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449477446|ref|XP_004155025.1| PREDICTED: copper methylamine oxidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225456916|ref|XP_002277961.1| PREDICTED: copper methylamine oxidase-like [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query701
TAIR|locus:2041589776 AT2G42490 [Arabidopsis thalian 1.0 0.903 0.836 0.0
UNIPROTKB|Q59118684 Q59118 "Histamine oxidase" [Ar 0.757 0.776 0.425 7.7e-116
ASPGD|ASPL0000068564683 AN7641 [Emericella nidulans (t 0.780 0.800 0.384 1.7e-103
POMBASE|SPAC2E1P3.04712 cao1 "copper amine oxidase Cao 0.784 0.772 0.364 1.2e-98
ASPGD|ASPL0000028453668 AN5690 [Emericella nidulans (t 0.778 0.817 0.383 1.8e-97
ASPGD|ASPL0000029984666 AN8454 [Emericella nidulans (t 0.767 0.807 0.380 8.8e-96
UNIPROTKB|G4NJD1704 MGG_15019 "Amine oxidase" [Mag 0.767 0.764 0.377 2.6e-94
ASPGD|ASPL0000050933674 AN2532 [Emericella nidulans (t 0.726 0.755 0.389 1e-91
ASPGD|ASPL0000045279682 AN1586 [Emericella nidulans (t 0.721 0.741 0.380 1.9e-91
CGD|CAL0001538709 AMO1 [Candida albicans (taxid: 0.776 0.767 0.335 7.2e-86
TAIR|locus:2041589 AT2G42490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3272 (1156.9 bits), Expect = 0., P = 0.
 Identities = 590/705 (83%), Positives = 645/705 (91%)

Query:     1 MMVRAQTSHPLDPLSAAEISXXXXXXXXXXXXPEVRDSMRFVEVVRVEPDKQVVALADAY 60
             +M R +T HPLDPLSAAEIS            PEVRD MRF+EV  VEPDKQVVALADAY
Sbjct:    72 VMPRTETKHPLDPLSAAEISVAVATVRAAGANPEVRDGMRFIEVASVEPDKQVVALADAY 131

Query:    61 FFPPFQPSLIPRTKGGPIIPTKLPPRRARLVVYNKRSNETSIWVVELSEVHAATRGGHHR 120
             FFPPFQPSL+PRTK GP+IP KLPPRRARLVVYN++SNETS+W+V LSEVHA TRGGHHR
Sbjct:   132 FFPPFQPSLLPRTKSGPVIPMKLPPRRARLVVYNQKSNETSVWIVALSEVHAVTRGGHHR 191

Query:   121 GKVISSKVVPDVQPPMDAVEYAECEAVVKDFPPFREAMKKRGIEDMDLVMVDPWCVGYHS 180
             G+V+SS+V+PDVQPPMDA EYAECEA+VKDFPPF EAMK+RGIEDMDLVMVDPWCVGYHS
Sbjct:   192 GRVVSSQVIPDVQPPMDAAEYAECEAIVKDFPPFIEAMKRRGIEDMDLVMVDPWCVGYHS 251

Query:   181 DADAPSRRLAKPLIFCRTESDCPIENGYARPVEGIHVLVDMQNMVVIEFEDRKLVHLPPA 240
             +ADAPSRRLAKPLI+CRT+SD P+ENGYARPVEGI+VLVDMQNMVVIEFEDRK V LPP 
Sbjct:   252 EADAPSRRLAKPLIYCRTDSDSPMENGYARPVEGIYVLVDMQNMVVIEFEDRKFVPLPPP 311

Query:   241 DPLRNYTAGETRGGVDRSDIKPLQIVQPEGPSFRVNGHFVEWQKWNFRIGFTPREGLIIY 300
             DPLRNYT GE+RGGVDRSD+KPLQI+QPEGPSFRV G+FVEWQKWNFRIGFTPREGL+I+
Sbjct:   312 DPLRNYTPGESRGGVDRSDVKPLQIIQPEGPSFRVRGYFVEWQKWNFRIGFTPREGLVIH 371

Query:   301 SVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDC 360
             SVAYVDGSRGRRPVAHRLSFVEMVVPYGDPN+PHYRKNAFDAGEDGLGKNAHSLKKGCDC
Sbjct:   372 SVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNEPHYRKNAFDAGEDGLGKNAHSLKKGCDC 431

Query:   361 LGYIKYFDAHFTNFAGGVDTIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFIC 420
             LG IKYFDAHFTNF GGV+TIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRL+VSF+C
Sbjct:   432 LGSIKYFDAHFTNFTGGVETIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLTVSFLC 491

Query:   421 TVANYEYAFFWHFYQDGKIEAEVKLTGILSLGALQPGEVRKYGTIIAPGLYAPVHQHFFV 480
             TVANYEY F+WHFYQDGKIEAEVKLTGILSLGALQPGE RKYGT IAPGLYAPVHQHFF+
Sbjct:   492 TVANYEYGFYWHFYQDGKIEAEVKLTGILSLGALQPGETRKYGTTIAPGLYAPVHQHFFI 551

Query:   481 ARMDMAVDCKPGEAHNQVVEMNVKVEEPGKNNVHNNAFYAEEELLKSELQAMRDCNPLTA 540
             ARMDM+VDCKP EA NQVVE+NV+V+E G+NNVHNNAFYAEE+LLKSE  AMRDC+PL+A
Sbjct:   552 ARMDMSVDCKPAEAFNQVVEVNVRVDERGENNVHNNAFYAEEKLLKSEAVAMRDCDPLSA 611

Query:   541 RHWIIRNTRTVNRTGQLTGYKLVPGSNCLPLAGSEAKVLRRAAFLKHNLWVTPYAHDEMY 600
             RHWI+RNTRTVNRTGQLTGYKLVPGSNCLPLA  EAK LRRAAFLKHNLWVT YA DE +
Sbjct:   612 RHWIVRNTRTVNRTGQLTGYKLVPGSNCLPLARPEAKFLRRAAFLKHNLWVTRYAPDEKF 671

Query:   601 PGGEFPNQNPRVGEGLATWVEQNRSLEETDIVLWYVFGVTHIPRLEDWPVMPVDRIGFML 660
             PGGEFPNQNPR GEGLATWV+QNRSLEE+D+VLWYVFG+TH+PRLEDWPVMPV+ IGF L
Sbjct:   672 PGGEFPNQNPRAGEGLATWVKQNRSLEESDVVLWYVFGITHVPRLEDWPVMPVEHIGFTL 731

Query:   661 MPHGFFNCSPAVDVPPNESDLDLKDTAIAE----KPVQNGLLAKL 701
             MPHGFFNCSPAVDVPPN  +L+ K++ + E    K +Q GLL+KL
Sbjct:   732 MPHGFFNCSPAVDVPPNPCELETKESEVKEVVAPKALQTGLLSKL 776
GO:0005507 "copper ion binding" evidence=IEA;ISS
GO:0008131 "primary amine oxidase activity" evidence=IEA
GO:0009308 "amine metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0048038 "quinone binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0005777 "peroxisome" evidence=IDA
UNIPROTKB|Q59118 Q59118 "Histamine oxidase" [Arthrobacter globiformis (taxid:1665)] Back     alignment and assigned GO terms
ASPGD|ASPL0000068564 AN7641 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
POMBASE|SPAC2E1P3.04 cao1 "copper amine oxidase Cao1" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
ASPGD|ASPL0000028453 AN5690 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
ASPGD|ASPL0000029984 AN8454 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|G4NJD1 MGG_15019 "Amine oxidase" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
ASPGD|ASPL0000050933 AN2532 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
ASPGD|ASPL0000045279 AN1586 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
CGD|CAL0001538 AMO1 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.4.3.210.914
3rd Layer1.4.30.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query701
PRK11504647 PRK11504, tynA, tyramine oxidase; Provisional 0.0
COG3733654 COG3733, TynA, Cu2+-containing amine oxidase [Seco 0.0
pfam01179411 pfam01179, Cu_amine_oxid, Copper amine oxidase, en 0.0
PRK14696721 PRK14696, tynA, tyramine oxidase; Provisional 3e-85
PLN02566646 PLN02566, PLN02566, amine oxidase (copper-containi 1e-82
pfam02728101 pfam02728, Cu_amine_oxidN3, Copper amine oxidase, 6e-35
pfam0272786 pfam02727, Cu_amine_oxidN2, Copper amine oxidase, 9e-06
>gnl|CDD|236919 PRK11504, tynA, tyramine oxidase; Provisional Back     alignment and domain information 
 Score =  876 bits (2266), Expect = 0.0
 Identities = 342/675 (50%), Positives = 436/675 (64%), Gaps = 48/675 (7%)

Query: 5   AQTSHPLDPLSAAEISVAVATVRAAGATPEVRDSMRFVEVVRVEPDKQVVALADAYFFPP 64
           A  SHPLDPL+AAEI  AVA +RA G    + +S RFV +   EP K  V          
Sbjct: 10  AAVSHPLDPLTAAEIEAAVAILRAEG---LLGESTRFVSIELAEPPKAEVL--------A 58

Query: 65  FQPSLIPRTKGGPIIPTKLPPRRARLVVYNKRSNETSIWVVELSEVHAATRGGHHRGKVI 124
           F P       G PI       RRA +V+Y++ + +T   VV L+            G+V+
Sbjct: 59  FDP-------GDPI------DRRAFVVLYDRATGKTYEAVVSLTA-----------GEVV 94

Query: 125 SSKVVPDVQPPMDAVEYAECEAVVKDFPPFREAMKKRGIEDMDLVMVDPWCVGYHSDADA 184
           S + +P VQPP+   E+ ECE VV+  P ++ A+ KRGI D DLVMVDPW  GY  + + 
Sbjct: 95  SWEEIPGVQPPILLEEFEECEEVVRADPRWQAALAKRGITDFDLVMVDPWSAGYFGEPEE 154

Query: 185 PSRRLAKPLIFCRTESDCPIENGYARPVEGIHVLVDMQNMVVIEFEDRKLVHLPPADPLR 244
             RRLA+ L F R +   P +NGYARP+EG+  +VD+  M V+  ED  +V +P  D   
Sbjct: 155 RGRRLARGLAFVRAD---PGDNGYARPIEGLVAVVDLNTMEVLRVEDHGVVPIPAED--G 209

Query: 245 NYTAGETRGGVDRSDIKPLQIVQPEGPSFRVNGHFVEWQKWNFRIGFTPREGLIIYSVAY 304
           NY          R+D+KPL+I QPEGPSF V+G+ VEWQKW+FR+GF PREGL+++ V+Y
Sbjct: 210 NYDPEFI--PPLRTDLKPLEITQPEGPSFTVDGNEVEWQKWSFRVGFNPREGLVLHQVSY 267

Query: 305 VDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYI 364
            DG R  RP+ +R S  EMVVPYGDP+  HY KNAFDAGE GLG+ A+SL+ GCDCLG I
Sbjct: 268 DDGGR-ERPILYRASLSEMVVPYGDPSPTHYWKNAFDAGEYGLGRLANSLELGCDCLGEI 326

Query: 365 KYFDAHFTNFAGGVDTIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFICTVAN 424
           +YFDA   +  G   TI+N +C+HEED+GILWKH D+RTG AEVRRSRRL +SF  TV N
Sbjct: 327 RYFDAVLADSDGEPYTIKNAICMHEEDYGILWKHTDFRTGSAEVRRSRRLVISFFATVGN 386

Query: 425 YEYAFFWHFYQDGKIEAEVKLTGILSLGALQPGEVRKYGTIIAPGLYAPVHQHFFVARMD 484
           Y+Y F+W+FYQDG IE EVKLTGI+   A+ PGE   YGT++APGLYAP HQHFF AR+D
Sbjct: 387 YDYGFYWYFYQDGTIEFEVKLTGIVFTAAVPPGETPPYGTLVAPGLYAPNHQHFFNARLD 446

Query: 485 MAVDCKPGEAHNQVVEMNVKVEEPGKNNVHNNAFYAEEELLKSELQAMRDCNPLTARHWI 544
           M VD   G   N V E+N      G +N H NAFY  E LL++E +A RD +P T R+W 
Sbjct: 447 MDVD---GPG-NSVYEVNSVPVPMGPDNPHGNAFYTRETLLETESEAARDADPSTGRYWK 502

Query: 545 IRNTRTVNRTGQLTGYKLVPGSNCLPLAGSEAKVLRRAAFLKHNLWVTPYAHDEMYPGGE 604
           I N    NR G+   YKLVPG N   LA   + + +RA F  H+LWVTPY  DE Y  G+
Sbjct: 503 IVNPNKKNRLGEPVAYKLVPGGNPPLLADPGSSIRQRAGFATHHLWVTPYDPDERYAAGD 562

Query: 605 FPNQNPRVGEGLATWVEQNRSLEETDIVLWYVFGVTHIPRLEDWPVMPVDRIGFMLMPHG 664
           +PNQ+   G+GL  ++  +RS+E TD+VLWY FG+TH+PR EDWPVMPVD  GF L P G
Sbjct: 563 YPNQSAG-GDGLPAYIAADRSIENTDVVLWYTFGITHVPRPEDWPVMPVDYAGFKLKPVG 621

Query: 665 FFNCSPAVDVPPNES 679
           FF+ +PA+D+PP   
Sbjct: 622 FFDRNPALDLPPEPP 636

Length = 647
>gnl|CDD|226256 COG3733, TynA, Cu2+-containing amine oxidase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|216347 pfam01179, Cu_amine_oxid, Copper amine oxidase, enzyme domain Back     alignment and domain information
>gnl|CDD|184793 PRK14696, tynA, tyramine oxidase; Provisional Back     alignment and domain information
>gnl|CDD|215306 PLN02566, PLN02566, amine oxidase (copper-containing) Back     alignment and domain information
>gnl|CDD|202361 pfam02728, Cu_amine_oxidN3, Copper amine oxidase, N3 domain Back     alignment and domain information
>gnl|CDD|145726 pfam02727, Cu_amine_oxidN2, Copper amine oxidase, N2 domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 701
PRK11504647 tynA tyramine oxidase; Provisional 100.0
PRK14696721 tynA tyramine oxidase; Provisional 100.0
COG3733654 TynA Cu2+-containing amine oxidase [Secondary meta 100.0
PLN02566646 amine oxidase (copper-containing) 100.0
KOG1186670 consensus Copper amine oxidase [Secondary metaboli 100.0
PF01179413 Cu_amine_oxid: Copper amine oxidase, enzyme domain 100.0
PF02728101 Cu_amine_oxidN3: Copper amine oxidase, N3 domain; 99.89
PF0272786 Cu_amine_oxidN2: Copper amine oxidase, N2 domain; 99.66
>PRK11504 tynA tyramine oxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.2e-190  Score=1605.44  Aligned_cols=630  Identities=53%  Similarity=0.933  Sum_probs=594.2

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCceEEEEEEecCCChhhhhccccccCCCCCCCccccCCCCCCCCCCCCC
Q 005333            6 QTSHPLDPLSAAEISVAVATVRAAGATPEVRDSMRFVEVVRVEPDKQVVALADAYFFPPFQPSLIPRTKGGPIIPTKLPP   85 (701)
Q Consensus         6 ~~~HPLdpLs~~Ei~~a~~~v~~~~~~~~~~~~~~F~~i~L~EP~K~~v~~~~~~~~p~~~~~l~~~~~~~~~~~~~~p~   85 (701)
                      .+.|||||||++||++|++|||++...   ++.++|++|+|+||+|++|+.   |            ..+.      .++
T Consensus        11 ~~~HPLdpLt~~Ei~~a~~iv~~~~~~---~~~~~F~~i~L~EP~K~~v~~---~------------~~g~------~~~   66 (647)
T PRK11504         11 AVSHPLDPLTAAEIEAAVAILRAEGLL---GESTRFVSIELAEPPKAEVLA---F------------DPGD------PID   66 (647)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHhcccc---CCceEEEEeeccCCCHHHHHh---h------------hcCC------CCC
Confidence            347999999999999999999998642   357999999999999999983   2            1222      237


Q ss_pred             ceEEEEEEECCCCcEEEEEEeCccccccccCCcccceEEEeeecCCCCCCCCHHHHHHHHHHHhcChhHHHHHHHcCCCC
Q 005333           86 RRARLVVYNKRSNETSIWVVELSEVHAATRGGHHRGKVISSKVVPDVQPPMDAVEYAECEAVVKDFPPFREAMKKRGIED  165 (701)
Q Consensus        86 R~A~vv~~~~~~~~~~e~~V~L~~~~~~~~~~~~~~~v~~~~~~~~~~~p~~~~E~~~~~~~~~~~p~~~~a~~~~gl~~  165 (701)
                      |+|+|++++..++.++|++|+|+           +++|++|+.++++||+++.+|+.+|+++|++||+|+++|++|||++
T Consensus        67 R~a~v~~~~~~~~~~~e~vVdL~-----------~~~V~~~~~~~~~~p~~~~~e~~~~e~~~~~dp~~~~ai~~rgl~~  135 (647)
T PRK11504         67 RRAFVVLYDRATGKTYEAVVSLT-----------AGEVVSWEEIPGVQPPILLEEFEECEEVVRADPRWQAALAKRGITD  135 (647)
T ss_pred             cEEEEEEEECCCCcEEEEEEECC-----------CCEEEEEEECCCccCCcCHHHHHHHHHHHhcCHHHHHHHHHcCCCC
Confidence            99999999988899999999997           6899999999999999999999999999999999999999999998


Q ss_pred             CCeEEEecccccccCCCCCCCcceeEEEEEEecCCCCCCCCccCCCCCCeEEEEeccccEEEEEecCceecCCCCCCCCC
Q 005333          166 MDLVMVDPWCVGYHSDADAPSRRLAKPLIFCRTESDCPIENGYARPVEGIHVLVDMQNMVVIEFEDRKLVHLPPADPLRN  245 (701)
Q Consensus       166 ~~~v~~dpw~~G~~~~~~~~~~Rl~~~~~~~r~~~~~~~~n~y~~Pi~gl~~~vD~~~~~v~~~~~~~~~~~p~~~~~~~  245 (701)
                      +++|+||||++|+++..++.++||+|++||+|.   ++.+|+|+||||||.++||++++||++|++.+..|+|+..  .+
T Consensus       136 ~~~V~~dpw~~G~~~~~~~~~~Rl~~~~~~~r~---~~~~n~Ya~Pi~G~~~vvDl~~~~vv~i~d~g~~p~p~~~--~~  210 (647)
T PRK11504        136 FDLVMVDPWSAGYFGEPEERGRRLARGLAFVRA---DPGDNGYARPIEGLVAVVDLNTMEVLRVEDHGVVPIPAED--GN  210 (647)
T ss_pred             cceEEEcCccccccCCCCcCCceEEEEEEEEec---CCCccccccccCceEEEEECCCCEEEEEecCCCCCCCCCC--CC
Confidence            889999999999988765557999999999996   3578999999999999999999999999998777777654  68


Q ss_pred             CCCCccCCCCCCCCCCCCeecCCCCCeEEEcceeEeeeceEEEEEecCCcceEEEEEEEecCCCCceeEEEEeeeeeEEe
Q 005333          246 YTAGETRGGVDRSDIKPLQIVQPEGPSFRVNGHFVEWQKWNFRIGFTPREGLIIYSVAYVDGSRGRRPVAHRLSFVEMVV  325 (701)
Q Consensus       246 y~~~~~~~~~~r~~lkp~~i~QPeG~sF~V~g~~V~W~~W~F~~gf~~reGl~L~dV~f~d~g~g~R~I~Yrlsl~Em~v  325 (701)
                      |.+..+. + .|+++||++|+||||+||+|+|++|+||||+||+|||+||||+||||+|+|+|++ ||||||+|||||+|
T Consensus       211 Y~~~~~~-~-~r~dlkPl~i~QPeG~sF~v~g~~V~W~~W~f~vgf~~reGlvL~dv~y~d~g~~-R~v~YrlslsEm~V  287 (647)
T PRK11504        211 YDPEFIP-P-LRTDLKPLEITQPEGPSFTVDGNEVEWQKWSFRVGFNPREGLVLHQVSYDDGGRE-RPILYRASLSEMVV  287 (647)
T ss_pred             CChhHcc-c-cccCCCCcceeCCCCCcEEEcCCEEEECCcEEEEecCCCCceEEEEEEEcCCCCc-ceEEEEeeeeeeee
Confidence            9987654 4 4999999999999999999999999999999999999999999999999998764 89999999999999


Q ss_pred             ecCCCCCccccceeeecCCCCCccCCCCCCCCCCCCCCeeEeeeeeecCCCceEEeeceEEeeeecCCccccccccCCCc
Q 005333          326 PYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFAGGVDTIENCVCLHEEDHGILWKHQDWRTGL  405 (701)
Q Consensus       326 pY~dp~~p~~~k~afD~geyG~G~~a~~L~~G~DCpg~i~YlD~~~~~~~g~p~~~~naICifE~d~G~l~rH~d~~~g~  405 (701)
                      |||||+++|++|+|||+||||+|.+||+|++||||||+|+|||+++++++|+|++++|||||||+|.|++|||+||+++.
T Consensus       288 PYgdp~p~~~~k~~fD~GeyG~G~~an~L~lGcDCpg~i~Y~D~~~~~~~G~p~~~~naICihE~D~GilwkHt~~r~~~  367 (647)
T PRK11504        288 PYGDPSPTHYWKNAFDAGEYGLGRLANSLELGCDCLGEIRYFDAVLADSDGEPYTIKNAICMHEEDYGILWKHTDFRTGS  367 (647)
T ss_pred             ecCCCCcchhhceeeeccccCCcccccccccCCCCCCCCEEcceEEecCCCCeEEecCEEEEeeecCCeeeeeeccCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeeeccEEEEEEeeeecccceEEEEEEeccccEEEEEEEEEEEEeeeeCCCCcCCccceecCCCccccceeeEEEEEee
Q 005333          406 AEVRRSRRLSVSFICTVANYEYAFFWHFYQDGKIEAEVKLTGILSLGALQPGEVRKYGTIIAPGLYAPVHQHFFVARMDM  485 (701)
Q Consensus       406 ~~v~r~r~LVvr~i~TVgNYDYi~~~~F~~dGtIe~~v~aTG~l~t~~~~~~~~~~yGt~V~~~~~g~~HqH~f~~RlD~  485 (701)
                      ++++|+|+||||+|+|||||||||+|+|||||+||++|+|||||+++++.+++..+||++|+|+++|++|||+|||||||
T Consensus       368 ~~v~r~r~LVvr~I~TVgNYdYi~~w~F~qdG~Ie~eV~aTGil~t~~~~~~~~~~yGt~V~~~v~a~~HqH~f~~RlD~  447 (647)
T PRK11504        368 AEVRRSRRLVISFFATVGNYDYGFYWYFYQDGTIEFEVKLTGIVFTAAVPPGETPPYGTLVAPGLYAPNHQHFFNARLDM  447 (647)
T ss_pred             EEEEeccEEEEEEEEecccccEEEEEEEecCceEEEEEEeeeEEEeeeeCCCccCCCcceecCCcccccceEEEEEEEcc
Confidence            99999999999999999999999999999999999999999999999997677789999999999999999999999999


Q ss_pred             eccCCCCCCccEEEEEeeeecCCCCCCCCCcceEEEEEEEehHHhhhhccCCCCCeEEEEecCCCcCCCCCceeEEEecC
Q 005333          486 AVDCKPGEAHNQVVEMNVKVEEPGKNNVHNNAFYAEEELLKSELQAMRDCNPLTARHWIIRNTRTVNRTGQLTGYKLVPG  565 (701)
Q Consensus       486 dVdG~~~g~~Nsv~~~~~~~~~~~~~np~~~~~~~~~t~~~~e~~a~~~~~~~~~r~~~i~N~~~~N~~G~p~gYrl~p~  565 (701)
                      ||||    .+|||++.++++.+.++.||++++|++++|++++|++|+++++++++|+|+|+|++++|++|+|+||||+|+
T Consensus       448 dIDG----~~Nsv~~~d~~~~p~~~~np~g~~~~~~~t~l~tE~~a~~~~~~~~~R~~~ivN~~~~N~~G~pvgYkl~p~  523 (647)
T PRK11504        448 DVDG----PGNSVYEVNSVPVPMGPDNPHGNAFYTRETLLETESEAARDADPSTGRYWKIVNPNKKNRLGEPVAYKLVPG  523 (647)
T ss_pred             cccC----CCceEEEEEeEecCCCCCCccceEEEEEEEEecchhhhhhccCCCCccEEEEECCCCcCCCCCeeeEEEccC
Confidence            9998    689999999999888889999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCchhhhhhhcccccceEEeecCCCCcCCCCCCCCCCCCCCCChhhhcccCCceeeCCeEEEEeeccccCCCC
Q 005333          566 SNCLPLAGSEAKVLRRAAFLKHNLWVTPYAHDEMYPGGEFPNQNPRVGEGLATWVEQNRSLEETDIVLWYVFGVTHIPRL  645 (701)
Q Consensus       566 ~~~~~l~~~~s~~~~ra~fa~~~lwVT~y~d~E~~asg~y~nq~~~~~~gl~~~~~~~esI~~eDiV~W~t~G~~HiPr~  645 (701)
                      +++.+|+.++|+..+||+||+||||||+|+|+|+||||+|+||+.+ .+||++|+++||+|+|||||||||||+||+||+
T Consensus       524 ~~~~~l~~~~s~~~~ra~fa~~~lwVT~y~d~E~~aag~y~~Qs~~-~~gl~~~~~~~~~i~~~DiVlW~t~G~~HvPr~  602 (647)
T PRK11504        524 GNPPLLADPGSSIRQRAGFATHHLWVTPYDPDERYAAGDYPNQSAG-GDGLPAYIAADRSIENTDVVLWYTFGITHVPRP  602 (647)
T ss_pred             CCccccCCCCchhhhcchhhhCcEEEeccCCCccccCCCCcccCCC-CCCHHHHhcCCCccccCceEEEEecCcccCCCh
Confidence            9999999999999999999999999999999999999999999975 479999999999999999999999999999999


Q ss_pred             CCCCCcccceeeEEEEeCCCCCCCCCCCCCCCCCCccc
Q 005333          646 EDWPVMPVDRIGFMLMPHGFFNCSPAVDVPPNESDLDL  683 (701)
Q Consensus       646 ED~Pvmp~~~~~f~L~P~nFFd~nP~ld~p~s~~~~~~  683 (701)
                      |||||||++++||+|||+|||++||+||+|++.+..+.
T Consensus       603 ED~PvMP~~~~gf~L~P~nFF~~NPaldvp~s~~~~~~  640 (647)
T PRK11504        603 EDWPVMPVDYAGFKLKPVGFFDRNPALDLPPEPPAACH  640 (647)
T ss_pred             hhCCCCccceEEEEEEcCCCCCCCccccCCCccccccc
Confidence            99999999999999999999999999999999875543

>PRK14696 tynA tyramine oxidase; Provisional Back     alignment and domain information
>COG3733 TynA Cu2+-containing amine oxidase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PLN02566 amine oxidase (copper-containing) Back     alignment and domain information
>KOG1186 consensus Copper amine oxidase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PF01179 Cu_amine_oxid: Copper amine oxidase, enzyme domain; InterPro: IPR015798 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information
>PF02728 Cu_amine_oxidN3: Copper amine oxidase, N3 domain; InterPro: IPR015802 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information
>PF02727 Cu_amine_oxidN2: Copper amine oxidase, N2 domain; InterPro: IPR015800 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query701
1ivu_A638 Crystal Structure Of Copper Amine Oxidase From Arth 1e-112
1ivv_A638 Crystal Structure Of Copper Amine Oxidase From Arth 1e-112
1ui7_A638 Site-Directed Mutagenesis Of His433 Involved In Bin 1e-112
1sih_A646 Agao In Covalent Complex With The Inhibitor Moba (" 1e-111
2e2u_A628 Substrate Schiff-Base Analogue Of Copper Amine Oxid 1e-111
2yx9_A638 Crystal Structure Of D298k Copper Amine Oxidase Fro 1e-111
2cwt_A638 Catalytic Base Deletion In Copper Amine Oxidase Fro 1e-111
1ui8_A638 Site-directed Mutagenesis Of His592 Involved In Bin 1e-111
1ekm_A656 Crystal Structure At 2.5 A Resolution Of Zinc-Subst 4e-94
3sx1_A692 Hansenula Polymorpha Copper Amine Oxidase-1 In Its 2e-93
1a2v_A655 Copper Amine Oxidase From Hansenula Polymorpha Leng 4e-93
3n9h_A692 Crystal Structural Of Mutant Y305a In The Copper Am 1e-91
2oov_C660 Crystal Structure Of Hansenula Polymorpha Amine Oxi 6e-91
2oov_A660 Crystal Structure Of Hansenula Polymorpha Amine Oxi 3e-90
3nbb_B663 Crystal Structure Of Mutant Y305f Expressed In E. C 7e-90
3nbj_B657 Crystal Structure Of Y305f Mutant Of The Copper Ami 8e-90
3loy_A633 Crystal Structure Of A Copper-Containing Benzylamin 1e-83
2wgq_A727 Zinc Substituted E Coli Copper Amine Oxidase, A Mod 1e-65
1oac_A727 Crystal Structure Of A Quinoenzyme: Copper Amine Ox 8e-65
1jrq_A727 X-Ray Structure Analysis Of The Role Of The Conserv 2e-64
1qal_A721 The Active Site Base Controls Cofactor Reactivity I 3e-64
1qaf_A721 The Active Site Base Controls Cofactor Reactivity I 3e-64
1qak_A722 The Active Site Base Controls Cofactor Reactivity I 8e-64
1w2z_A649 Psao And Xenon Length = 649 1e-62
1ksi_A642 Crystal Structure Of A Eukaryotic (Pea Seedling) Co 2e-62
1n9e_A787 Crystal Structure Of Pichia Pastoris Lysyl Oxidase 4e-26
1rky_A747 Pplo + Xe Length = 747 5e-25
1tu5_A746 Crystal Structure Of Bovine Plasma Copper-Containin 6e-24
1us1_A763 Crystal Structure Of Human Vascular Adhesion Protei 1e-22
3ala_A748 Crystal Structure Of Vascular Adhesion Protein-1 In 1e-22
2c10_A735 The Structure Of A Truncated, Soluble Version Of Se 1e-22
3pgb_A797 Crystal Structure Of Aspergillus Nidulans Amine Oxi 2e-20
3hi7_A731 Crystal Structure Of Human Diamine Oxidase Length = 7e-20
>pdb|1IVU|A Chain A, Crystal Structure Of Copper Amine Oxidase From Arthrobacter Globiformis: Initial Intermediate In Topaquinone Biogenesis Length = 638 Back     alignment and structure 
Iteration: 1

 Score =  404 bits (1037), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 221/525 (42%), Positives = 311/525 (59%), Gaps = 15/525 (2%)
Query: 156 EAMKKRGIEDMDLVMVDPWCVGYHSDADAPSRRLAKPLIFCRTESDCPIENGYARPVEGI 215
           +A+  R + D+  V V P   G    A+   RR+ + L F +   D P ++ +A PV+G+
Sbjct: 120 KALAARNL-DVSKVRVAPLSAGVFEYAEERGRRILRGLAFVQ---DFPEDSAWAHPVDGL 175
Query: 216 HVLVDMQNMVVIEFEDRKLVHLPPADPLRNYTAGETRGGVDRSDIKPLQIVQPEGPSFRV 275
              VD+ +  V    D  +  +P      NYT  E  G + R+  KP+ I QPEGPSF V
Sbjct: 176 VAYVDVVSKEVTRVIDTGVFPVPAEHG--NYTDPELTGPL-RTTQKPISITQPEGPSFTV 232
Query: 276 NG-HFVEWQKWNFRIGFTPREGLIIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNDPH 334
            G + +EW+KW+  +GF  REG++++++A+ DG R  RP+ +R S  EMVVPYGDP+   
Sbjct: 233 TGGNHIEWEKWSLDVGFDVREGVVLHNIAFRDGDR-LRPIINRASIAEMVVPYGDPSPIR 291
Query: 335 YRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFAGGVDTIENCVCLHEEDHGI 394
             +N FD GE  +G+ A+SL+ GCDCLG I Y     ++  G    I N +C+HEED GI
Sbjct: 292 SWQNYFDTGEYLVGQYANSLELGCDCLGDITYLSPVISDAFGNPREIRNGICMHEEDWGI 351
Query: 395 LWKHQDWRTGLAEVRRSRRLSVSFICTVANYEYAFFWHFYQDGKIEAEVKLTGILSLGAL 454
           L KH D  +G+   RR+RR+ +SF  T+ NY+Y F+W+ Y DG IE E K TG++   A 
Sbjct: 352 LAKHSDLWSGINYTRRNRRMVISFFTTIGNYDYGFYWYLYLDGTIEFEAKATGVVFTSAF 411
Query: 455 QPGEVRKYGTIIAPGLYAPVHQHFFVARMDMAVDCKPGEAHNQVVEMNVKVEEPGKNNVH 514
             G      + +APGL AP HQH F AR+DMA+D       N+V E +V  +  G  N  
Sbjct: 412 PEGGSDNI-SQLAPGLGAPFHQHIFSARLDMAIDG----FTNRVEEEDVVRQTMGPGNER 466
Query: 515 NNAFYAEEELLKSELQAMRDCNPLTARHWIIRNTRTVNRTGQLTGYKLVPGSNCLPLAGS 574
            NAF  +  +L  E +A+R+ +  T R WII N  + NR  +  GYKL   +    LA  
Sbjct: 467 GNAFSRKRTVLTRESEAVREADARTGRTWIISNPESKNRLNEPVGYKLHAHNQPTLLADP 526
Query: 575 EAKVLRRAAFLKHNLWVTPYAHDEMYPGGEFPNQNPRVGEGLATWVEQNRSLEETDIVLW 634
            + + RRAAF   +LWVT YA DE YP G+F NQ+   G GL +++ Q+R ++  DIV+W
Sbjct: 527 GSSIARRAAFATKDLWVTRYADDERYPTGDFVNQHSG-GAGLPSYIAQDRDIDGQDIVVW 585
Query: 635 YVFGVTHIPRLEDWPVMPVDRIGFMLMPHGFFNCSPAVDVPPNES 679
           + FG+TH PR+EDWP+MPVD +GF L P GFF+ SP +DVP N S
Sbjct: 586 HTFGLTHFPRVEDWPIMPVDTVGFKLRPEGFFDRSPVLDVPANPS 630
>pdb|1IVV|A Chain A, Crystal Structure Of Copper Amine Oxidase From Arthrobacter Globiformis: Early Intermediate In Topaquinone Biogenesis Length = 638 Back     alignment and structure
>pdb|1UI7|A Chain A, Site-Directed Mutagenesis Of His433 Involved In Binding Of Copper Ion In Arthrobacter Globiformis Amine Oxidase Length = 638 Back     alignment and structure
>pdb|1SIH|A Chain A, Agao In Covalent Complex With The Inhibitor Moba ("4-(4- Methylphenoxy)-2-Butyn-1-Amine") Length = 646 Back     alignment and structure
>pdb|2E2U|A Chain A, Substrate Schiff-Base Analogue Of Copper Amine Oxidase From Arthrobacter Globiformis Formed With 4-Hydroxybenzylhydrazine Length = 628 Back     alignment and structure
>pdb|2YX9|A Chain A, Crystal Structure Of D298k Copper Amine Oxidase From Arthrobacter Globiformis Length = 638 Back     alignment and structure
>pdb|2CWT|A Chain A, Catalytic Base Deletion In Copper Amine Oxidase From Arthrobacter Globiformis Length = 638 Back     alignment and structure
>pdb|1UI8|A Chain A, Site-directed Mutagenesis Of His592 Involved In Binding Of Copper Ion In Arthrobacter Globiformis Amine Oxidase Length = 638 Back     alignment and structure
>pdb|1EKM|A Chain A, Crystal Structure At 2.5 A Resolution Of Zinc-Substituted Copper Amine Oxidase Of Hansenula Polymorpha Expressed In Escherichia Coli Length = 656 Back     alignment and structure
>pdb|3SX1|A Chain A, Hansenula Polymorpha Copper Amine Oxidase-1 In Its Apo Form Length = 692 Back     alignment and structure
>pdb|1A2V|A Chain A, Copper Amine Oxidase From Hansenula Polymorpha Length = 655 Back     alignment and structure
>pdb|3N9H|A Chain A, Crystal Structural Of Mutant Y305a In The Copper Amine Oxidase From Hansenula Polymorpha Length = 692 Back     alignment and structure
>pdb|2OOV|C Chain C, Crystal Structure Of Hansenula Polymorpha Amine Oxidase To 1.7 Angstroms Length = 660 Back     alignment and structure
>pdb|2OOV|A Chain A, Crystal Structure Of Hansenula Polymorpha Amine Oxidase To 1.7 Angstroms Length = 660 Back     alignment and structure
>pdb|3LOY|A Chain A, Crystal Structure Of A Copper-Containing Benzylamine Oxidase From Hansenula Polymorpha Length = 633 Back     alignment and structure
>pdb|2WGQ|A Chain A, Zinc Substituted E Coli Copper Amine Oxidase, A Model For The Precursor For 2,4,5-Trihydroxyphenylalaninequinone Formation Length = 727 Back     alignment and structure
>pdb|1OAC|A Chain A, Crystal Structure Of A Quinoenzyme: Copper Amine Oxidase Of Escherichia Coli At 2 Angstroems Resolution Length = 727 Back     alignment and structure
>pdb|1JRQ|A Chain A, X-Ray Structure Analysis Of The Role Of The Conserved Tyrosine-369 In Active Site Of E. Coli Amine Oxidase Length = 727 Back     alignment and structure
>pdb|1QAL|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-Ray Crystallographic Studies With Mutational Variants Length = 721 Back     alignment and structure
>pdb|1QAF|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-Ray Crystallographic Studies With Mutational Variants Length = 721 Back     alignment and structure
>pdb|1QAK|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-ray Crystallographic Studies With Mutational Variants Length = 722 Back     alignment and structure
>pdb|1W2Z|A Chain A, Psao And Xenon Length = 649 Back     alignment and structure
>pdb|1KSI|A Chain A, Crystal Structure Of A Eukaryotic (Pea Seedling) Copper-Containing Amine Oxidase At 2.2a Resolution Length = 642 Back     alignment and structure
>pdb|1N9E|A Chain A, Crystal Structure Of Pichia Pastoris Lysyl Oxidase Pplo Length = 787 Back     alignment and structure
>pdb|1RKY|A Chain A, Pplo + Xe Length = 747 Back     alignment and structure
>pdb|1TU5|A Chain A, Crystal Structure Of Bovine Plasma Copper-Containing Amine Oxidase Length = 746 Back     alignment and structure
>pdb|1US1|A Chain A, Crystal Structure Of Human Vascular Adhesion Protein-1 Length = 763 Back     alignment and structure
>pdb|3ALA|A Chain A, Crystal Structure Of Vascular Adhesion Protein-1 In Space Group C2 Length = 748 Back     alignment and structure
>pdb|2C10|A Chain A, The Structure Of A Truncated, Soluble Version Of Semicarbazide-Sensitive Amine Oxidase Length = 735 Back     alignment and structure
>pdb|3PGB|A Chain A, Crystal Structure Of Aspergillus Nidulans Amine Oxidase Length = 797 Back     alignment and structure
>pdb|3HI7|A Chain A, Crystal Structure Of Human Diamine Oxidase Length = 731 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query701
1w6g_A646 Phenylethylamine oxidase; copper containing, metal 0.0
3loy_A633 Copper amine oxidase; TPQ, oxidoreductase; HET: TP 0.0
3sxx_A692 Peroxisomal primary amine oxidase; oxidoreductase, 0.0
1ksi_A642 Copper amine oxidase; PEA seedling, oxidoreductase 0.0
1spu_A727 Copper amine oxidase; oxidoreductase, TPQ, peripla 0.0
1tu5_A746 Copper amine oxidase, liver isozyme; oxidoreductas 0.0
1w7c_A747 Lysyl oxidase; AMNE oxidase, copper, oxidoreductas 1e-176
3pgb_A797 Putative uncharacterized protein; oxidoreductase, 1e-176
3hi7_A731 Amiloride-sensitive amine oxidase; oxidoreductase, 1e-169
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-07
>3sxx_A Peroxisomal primary amine oxidase; oxidoreductase, peroxisome; HET: GOL; 1.27A {Pichia angusta} PDB: 3sx1_A* 3t0u_A 3n9h_A* 3nbj_A* 3nbb_A* 2oqe_C* 2oov_C* 2oqe_A* 2oov_A* 1ekm_A 1a2v_A* Length = 692 Back     alignment and structure
>1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 d.82.1.1 PDB: 1d6y_A* 1d6u_A* 1d6z_A* 2wgq_A 1oac_A* 1dyu_A* 2w0q_A* 2wo0_A* 2wof_A* 2woh_A* 1lvn_A* 1jrq_A* 1qak_A* 1qaf_A* 1qal_A* Length = 727 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query701
3sxx_A692 Peroxisomal primary amine oxidase; oxidoreductase, 100.0
3loy_A633 Copper amine oxidase; TPQ, oxidoreductase; HET: TP 100.0
1w6g_A646 Phenylethylamine oxidase; copper containing, metal 100.0
1ksi_A642 Copper amine oxidase; PEA seedling, oxidoreductase 100.0
1spu_A727 Copper amine oxidase; oxidoreductase, TPQ, peripla 100.0
1w7c_A747 Lysyl oxidase; AMNE oxidase, copper, oxidoreductas 100.0
1tu5_A746 Copper amine oxidase, liver isozyme; oxidoreductas 100.0
3hi7_A731 Amiloride-sensitive amine oxidase; oxidoreductase, 100.0
3pgb_A797 Putative uncharacterized protein; oxidoreductase, 100.0
>3sxx_A Peroxisomal primary amine oxidase; oxidoreductase, peroxisome; HET: GOL; 1.27A {Pichia angusta} PDB: 3sx1_A* 3t0u_A 3n9h_A* 3nbj_A* 3nbb_A* 2oqe_C* 2oov_C* 2oqe_A* 2oov_A* 1ekm_A 1a2v_A* Back     alignment and structure
Probab=100.00  E-value=1.5e-189  Score=1604.13  Aligned_cols=635  Identities=35%  Similarity=0.627  Sum_probs=591.0

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCceEEEEEEecCCChhhhhccccccCCCCCCCccccCCCCCCCCCCCCC
Q 005333            6 QTSHPLDPLSAAEISVAVATVRAAGATPEVRDSMRFVEVVRVEPDKQVVALADAYFFPPFQPSLIPRTKGGPIIPTKLPP   85 (701)
Q Consensus         6 ~~~HPLdpLs~~Ei~~a~~~v~~~~~~~~~~~~~~F~~i~L~EP~K~~v~~~~~~~~p~~~~~l~~~~~~~~~~~~~~p~   85 (701)
                      ...|||||||++||++|++||+++..+    +.++|++|+|+||+|++|++   |         +  +..     .++|+
T Consensus        20 ~~~HPLDpLs~~Ei~~a~~iv~~~~~~----~~~~F~~i~L~EP~K~~v~~---~---------~--~~~-----~~~p~   76 (692)
T 3sxx_A           20 RPAHPLDPLSTAEIKAATNTVKSYFAG----KKISFNTVTLREPARKAYIQ---W---------K--EQG-----GPLPP   76 (692)
T ss_dssp             CCSSTTSCCCHHHHHHHHHHHHHHTTT----SCEEEEEEEEECCCHHHHHH---H---------H--HSC-----CCCCC
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHhhCCC----CCcEEEEEECCCCCHHHHHH---H---------H--hcC-----CCCCC
Confidence            447999999999999999999987653    57999999999999999984   2         1  111     14788


Q ss_pred             ceEEEEEEECCCCcEEEEEEeCccccccccCCcccceEEEeeecCCCCCCCCHHHHHHHHHHHhcChhHHHHHHHcCCCC
Q 005333           86 RRARLVVYNKRSNETSIWVVELSEVHAATRGGHHRGKVISSKVVPDVQPPMDAVEYAECEAVVKDFPPFREAMKKRGIED  165 (701)
Q Consensus        86 R~A~vv~~~~~~~~~~e~~V~L~~~~~~~~~~~~~~~v~~~~~~~~~~~p~~~~E~~~~~~~~~~~p~~~~a~~~~gl~~  165 (701)
                      |+|+|++++..++.++|++|+|+           +++|++|+.++++||+|+.||+.+||++|++||+|+++|++|||++
T Consensus        77 R~a~v~~~~~~~~~~~e~vVdl~-----------~~~v~~~~~~~~~~p~~~~ee~~~~e~~~~~~p~~~~a~~~rgl~~  145 (692)
T 3sxx_A           77 RLAYYVILEAGKPGVKEGLVDLA-----------SLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPA  145 (692)
T ss_dssp             CEEEEEEEETTCSSEEEEEEETT-----------TTEEEEEEEETTCCCCCCHHHHHTHHHHHHHCHHHHHHHHHTTCCG
T ss_pred             eEEEEEEEECCCCCEEEEEEECC-----------CCeEEEEEECCCCcCCcCHHHHHHHHHHHHhCHHHHHHHHHcCCCc
Confidence            99999999988889999999997           6899999999999999999999999999999999999999999965


Q ss_pred             --CCeEEEecccccccCCCCCCCcceeEEEEEEecCCCCCCCCccCCCCCCeEEEEeccccEEEEEecCce-ecCCCCCC
Q 005333          166 --MDLVMVDPWCVGYHSDADAPSRRLAKPLIFCRTESDCPIENGYARPVEGIHVLVDMQNMVVIEFEDRKL-VHLPPADP  242 (701)
Q Consensus       166 --~~~v~~dpw~~G~~~~~~~~~~Rl~~~~~~~r~~~~~~~~n~y~~Pi~gl~~~vD~~~~~v~~~~~~~~-~~~p~~~~  242 (701)
                        +++|+||||++|+++.. +.++||+|++||+|..   +++|+|+|||| |+++||++++||++|++... .|+|+.. 
T Consensus       146 ~~~~~V~~dpw~~G~~~~~-~~~~Rl~~~~~y~r~~---~~~N~Ya~Pl~-~~~vvD~~~~~vi~id~~~~~~p~~~~~-  219 (692)
T 3sxx_A          146 NEMHKVYCDPWTIGYDERW-GTGKRLQQALVYYRSD---EDDSQYSHPLD-FCPIVDTEEKKVIFIDIPNRRRKVSKHK-  219 (692)
T ss_dssp             GGGGGEEEEEEECCCCTTT-TTSSCEEEEEEEECSS---TTSCGGGCBCS-CEEEEETTTTEEEEEECCSSCCCCCCSC-
T ss_pred             cccceEEEccccccccCCC-CCCceEEEEEEEEecC---CCCCcccccce-eEEEEECCCCEEEEEecCCCCCCCCCCC-
Confidence              44599999999998754 4589999999999973   46899999999 99999999999999988754 4554433 


Q ss_pred             CCCCCCCccC--CCCCCC-CCCCCeecCCCCCeEEEcceeEeeeceEEEEEecCCcceEEEEEEEecCCCCceeEEEEee
Q 005333          243 LRNYTAGETR--GGVDRS-DIKPLQIVQPEGPSFRVNGHFVEWQKWNFRIGFTPREGLIIYSVAYVDGSRGRRPVAHRLS  319 (701)
Q Consensus       243 ~~~y~~~~~~--~~~~r~-~lkp~~i~QPeG~sF~V~g~~V~W~~W~F~~gf~~reGl~L~dV~f~d~g~g~R~I~Yrls  319 (701)
                      ..||.+..+.  ++. |+ ++|||+|+||||+||+|+||+|+||||+||||||+||||+||||+|+|+|+ .||||||+|
T Consensus       220 ~~~Y~p~~~~~~~~~-r~~d~kP~~i~QPeG~sF~v~g~~V~W~~W~F~vgf~~reGlvL~dV~y~~~g~-~R~V~YrlS  297 (692)
T 3sxx_A          220 HANFYPKHMIEKVGA-MRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGN-VRPIFHRIS  297 (692)
T ss_dssp             CCCCSHHHHHHHHSS-CCCCCCCCEEECTTCCSCEEETTEEEETTEEEEEEEETTTEEEEEEEEEEETTE-EEEEEEEEE
T ss_pred             CCCCChHHccccCCC-CCCCCCCceecCCCCCcEEEcCCeEEecCcEEEEecCCCCceEEEEEEEcCCCc-ceeeeeeee
Confidence            4689876543  344 88 999999999999999999999999999999999999999999999999765 699999999


Q ss_pred             eeeEEeecCCCCCccccceeeecCCCCCccCCCCCCCCCCCCCCeeEeeeeeecCCCceEEeeceEEeeeecCCcccccc
Q 005333          320 FVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFAGGVDTIENCVCLHEEDHGILWKHQ  399 (701)
Q Consensus       320 l~Em~vpY~dp~~p~~~k~afD~geyG~G~~a~~L~~G~DCpg~i~YlD~~~~~~~g~p~~~~naICifE~d~G~l~rH~  399 (701)
                      ||||+||||||++||++|+|||+||||+|.+||+|++||||||+|+|||+++++++|+|++++|||||||+|+|++|||+
T Consensus       298 l~Em~VPYgdp~~p~~~k~afD~GeyG~G~~an~L~lGcDCpg~i~YlD~~~~~~~G~p~~~~NaICihE~d~Gil~kHt  377 (692)
T 3sxx_A          298 LSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHS  377 (692)
T ss_dssp             EEEEEEEBCCCSTTGGGCEECHHHHTCTTTTBCCCTTTTTSCSSCEEEEEEEECTTSCEEEEEEEEEEEEEEEEEEEEEE
T ss_pred             hheeEEecCCCCchhhhheeeeccccCCCccccccccCCCCCCCcEEeeeEEecCCCCEEEecceEEEeeccCCceEEee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCC--ceeeeeccEEEEEEeeeecccceEEEEEEeccccEEEEEEEEEEEEeeeeCCCC-cCCccceecCCCccccce
Q 005333          400 DWRTG--LAEVRRSRRLSVSFICTVANYEYAFFWHFYQDGKIEAEVKLTGILSLGALQPGE-VRKYGTIIAPGLYAPVHQ  476 (701)
Q Consensus       400 d~~~g--~~~v~r~r~LVvr~i~TVgNYDYi~~~~F~~dGtIe~~v~aTG~l~t~~~~~~~-~~~yGt~V~~~~~g~~Hq  476 (701)
                      |||++  .++++|+|+||||+|+|||||||||+|+|||||+||++|||||||+++++.+++ ..+|||+|+|+++|++||
T Consensus       378 ~~r~~~~~~~v~r~r~LVvr~i~TVgNYDYif~w~F~qdG~Ie~ev~aTGil~t~~~~~~~~~~~yGt~V~~~v~a~~Hq  457 (692)
T 3sxx_A          378 DFRDNFATSLVTRATKLVVSQIFTAANYEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQ  457 (692)
T ss_dssp             CGGGTTCSEEEEEEEEEEEEEEEEETTEEEEEEEEECTTSCEEEEEEEEECCCCEECCTTCCCTTTEEEEETTEEEECEE
T ss_pred             eccCCCceeeEEeccEEEEEEeeeccceeEEEEEEEecCCeEEEEEEEEEEEEeeeeCCCcccCCCcceecCCcccccee
Confidence            99998  899999999999999999999999999999999999999999999999998776 689999999999999999


Q ss_pred             eeEEEEEeeeccCCCCCCccEEEEEeeeecCC---CCCCCCCcceEEEEEEEehHHhhhhccCCCCCeEEEEecCCCcCC
Q 005333          477 HFFVARMDMAVDCKPGEAHNQVVEMNVKVEEP---GKNNVHNNAFYAEEELLKSELQAMRDCNPLTARHWIIRNTRTVNR  553 (701)
Q Consensus       477 H~f~~RlD~dVdG~~~g~~Nsv~~~~~~~~~~---~~~np~~~~~~~~~t~~~~e~~a~~~~~~~~~r~~~i~N~~~~N~  553 (701)
                      |+|||||||||||    .+|||++.++++.+.   ++.|||+++|++++|+++||++|++++++.++|+|+|+|++++|+
T Consensus       458 H~f~~RlD~dIdG----~~Nsv~~~d~~~~~~~~~~~~np~g~~~~~~~t~~~tE~ea~~~~~~~~~R~~~i~N~~~~N~  533 (692)
T 3sxx_A          458 HLFSLRIDPRIDG----DGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNP  533 (692)
T ss_dssp             EEEEEEEEECTTS----SCBEEEEEEEEECSSCTTBTTBTTSCCEEEEEEECCBHHHHCBCCCGGGTCEEEEECTTCCCT
T ss_pred             EEEEEEeccccCC----CCceEEEEEeEEccCCCCCCCCCCcceeEEEEEEccchhhhhhccCCCCCcEEEEeCCCCcCC
Confidence            9999999999998    699999999998775   568999999999999999999999999999999999999999999


Q ss_pred             C-CCceeEEEecCCCCCCCCCCchhhhhhhcccccceEEeecCCCCcCCCCCCCCCCCCCC-CChhhhc-ccCCceeeCC
Q 005333          554 T-GQLTGYKLVPGSNCLPLAGSEAKVLRRAAFLKHNLWVTPYAHDEMYPGGEFPNQNPRVG-EGLATWV-EQNRSLEETD  630 (701)
Q Consensus       554 ~-G~p~gYrl~p~~~~~~l~~~~s~~~~ra~fa~~~lwVT~y~d~E~~asg~y~nq~~~~~-~gl~~~~-~~~esI~~eD  630 (701)
                      + |+|+||||+|++++++|+.|+|...+||+||+||||||||+|+|+||||+|+||+++.+ +||++|+ ++||+|+|||
T Consensus       534 ~sG~pvgYkL~p~~~~~ll~~~~s~~~~ra~fa~~~lwVT~y~d~E~~aag~y~nQs~g~p~~gl~~w~~~~~e~I~n~D  613 (692)
T 3sxx_A          534 YSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTD  613 (692)
T ss_dssp             TTCSCCEEEEECCCCCCCCSCTTSHHHHHCGGGGSSEEEEECCTTCCCTTCSSCTTCCSCSSCHHHHHHTTSCSBCSSBC
T ss_pred             CCCccceEEEecCCCCcccCCCCchhhhhchhcccceEEecCCCCccCCCCCCccCCCCCCCCChHHHhhcCCceeecCc
Confidence            8 99999999999999888999999999999999999999999999999999999997632 7999999 8999999999


Q ss_pred             eEEEEeeccccCCCCCCCCCcccceeeEEEEeCCCCCCCCCCCCCCCCCCcccccc
Q 005333          631 IVLWYVFGVTHIPRLEDWPVMPVDRIGFMLMPHGFFNCSPAVDVPPNESDLDLKDT  686 (701)
Q Consensus       631 iV~W~t~G~~HiPr~ED~Pvmp~~~~~f~L~P~nFFd~nP~ld~p~s~~~~~~~~~  686 (701)
                      |||||||||||+||+|||||||++++||+|||+|||++||+||+|++.+..+++++
T Consensus       614 iV~W~t~G~~HiPr~ED~PvMP~~~~gf~LrP~nFFd~NPaldvp~~~~~~~~~v~  669 (692)
T 3sxx_A          614 ILFFHTFGITHFPAPEDFPLMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAK  669 (692)
T ss_dssp             EEEEEEEEEEECCCGGGSSSCCCEEEEEEEEEESSSSSCTTTTSCCSEEECHHHHH
T ss_pred             eEEEEecCcccCCchhcCCCCcceEEEEEEECCCcCCCCCcccCCCcccccChhhh
Confidence            99999999999999999999999999999999999999999999999999998876
>1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 d.82.1.1 PDB: 1d6y_A* 1d6u_A* 1d6z_A* 2wgq_A 1oac_A* 1dyu_A* 2w0q_A* 2wo0_A* 2wof_A* 2woh_A* 1lvn_A* 1jrq_A* 1qak_A* 1qaf_A* 1qal_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 701
d1w6ga1417 b.30.2.1 (A:212-628) Copper amine oxidase, domain 0.0
d2oqea1436 b.30.2.1 (A:237-672) Copper amine oxidase, domain 0.0
d1w2za1441 b.30.2.1 (A:207-647) Copper amine oxidase, domain 0.0
d1d6za1424 b.30.2.1 (A:301-724) Copper amine oxidase, domain 1e-178
d1w7ca1460 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 1e-167
d1d6za3115 d.17.2.1 (A:186-300) Copper amine oxidase, domains 1e-31
d1w6ga3115 d.17.2.1 (A:97-211) Copper amine oxidase, domains 1e-29
d1w2za3108 d.17.2.1 (A:99-206) Copper amine oxidase, domains 3e-28
d2oqea3121 d.17.2.1 (A:116-236) Copper amine oxidase, domains 6e-25
d2oqea298 d.17.2.1 (A:18-115) Copper amine oxidase, domains 1e-20
d1d6za295 d.17.2.1 (A:91-185) Copper amine oxidase, domains 5e-16
d1w6ga288 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 7e-13
d1w2za293 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 5e-12
>d1w6ga1 b.30.2.1 (A:212-628) Copper amine oxidase, domain 3 {Arthrobacter globiformis [TaxId: 1665]} Length = 417 Back     information, alignment and structure

class: All beta proteins
fold: Supersandwich
superfamily: Amine oxidase catalytic domain
family: Amine oxidase catalytic domain
domain: Copper amine oxidase, domain 3
species: Arthrobacter globiformis [TaxId: 1665]

 Score =  536 bits (1383), Expect = 0.0
 Identities = 192/422 (45%), Positives = 264/422 (62%), Gaps = 8/422 (1%)

Query: 257 RSDIKPLQIVQPEGPSFRV-NGHFVEWQKWNFRIGFTPREGLIIYSVAYVDGSRGRRPVA 315
           R+  KP+ I QPEGPSF V  G+ +EW+KW+  +GF  REG++++++A+ DG R  RP+ 
Sbjct: 3   RTTQKPISITQPEGPSFTVTGGNHIEWEKWSLDVGFDVREGVVLHNIAFRDGDR-LRPII 61

Query: 316 HRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFA 375
           +R S  EMVVPYGDP+     +N FD GE  +G+ A+SL+ GCDCLG I Y     ++  
Sbjct: 62  NRASIAEMVVPYGDPSPIRSWQNYFDTGEYLVGQYANSLELGCDCLGDITYLSPVISDAF 121

Query: 376 GGVDTIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFICTVANYEYAFFWHFYQ 435
           G    I N +C+HEED GIL KH D  +G+   RR+RR+ +SF  T+ NY+Y F+W+ Y 
Sbjct: 122 GNPREIRNGICMHEEDWGILAKHSDLWSGINYTRRNRRMVISFFTTIGNYDYGFYWYLYL 181

Query: 436 DGKIEAEVKLTGILSLGALQPGEVRKYGTIIAPGLYAPVHQHFFVARMDMAVDCKPGEAH 495
           DG IE E K TG++   A   G      + +APGL AP HQH F AR+DMA+D       
Sbjct: 182 DGTIEFEAKATGVVFTSAFPEGGSD-NISQLAPGLGAPFHQHIFSARLDMAIDGFT---- 236

Query: 496 NQVVEMNVKVEEPGKNNVHNNAFYAEEELLKSELQAMRDCNPLTARHWIIRNTRTVNRTG 555
           N+V E +V  +  G  N   NAF  +  +L  E +A+R+ +  T R WII N  + NR  
Sbjct: 237 NRVEEEDVVRQTMGPGNERGNAFSRKRTVLTRESEAVREADARTGRTWIISNPESKNRLN 296

Query: 556 QLTGYKLVPGSNCLPLAGSEAKVLRRAAFLKHNLWVTPYAHDEMYPGGEFPNQNPRVGEG 615
           +  GYKL   +    LA   + + RRAAF   +LWVT YA DE YP G+F NQ+   G G
Sbjct: 297 EPVGYKLHAHNQPTLLADPGSSIARRAAFATKDLWVTRYADDERYPTGDFVNQHSG-GAG 355

Query: 616 LATWVEQNRSLEETDIVLWYVFGVTHIPRLEDWPVMPVDRIGFMLMPHGFFNCSPAVDVP 675
           L +++ Q+R ++  DIV+W+ FG+TH PR+EDWP+MPVD +GF L P GFF+ SP +DVP
Sbjct: 356 LPSYIAQDRDIDGQDIVVWHTFGLTHFPRVEDWPIMPVDTVGFKLRPEGFFDRSPVLDVP 415

Query: 676 PN 677
            N
Sbjct: 416 AN 417
>d2oqea1 b.30.2.1 (A:237-672) Copper amine oxidase, domain 3 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 436 Back     information, alignment and structure
>d1w2za1 b.30.2.1 (A:207-647) Copper amine oxidase, domain 3 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 441 Back     information, alignment and structure
>d1d6za1 b.30.2.1 (A:301-724) Copper amine oxidase, domain 3 {Escherichia coli [TaxId: 562]} Length = 424 Back     information, alignment and structure
>d1w7ca1 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastoris) [TaxId: 4922]} Length = 460 Back     information, alignment and structure
>d1d6za3 d.17.2.1 (A:186-300) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Length = 115 Back     information, alignment and structure
>d1w6ga3 d.17.2.1 (A:97-211) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Length = 115 Back     information, alignment and structure
>d1w2za3 d.17.2.1 (A:99-206) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 108 Back     information, alignment and structure
>d2oqea3 d.17.2.1 (A:116-236) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 121 Back     information, alignment and structure
>d2oqea2 d.17.2.1 (A:18-115) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 98 Back     information, alignment and structure
>d1d6za2 d.17.2.1 (A:91-185) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Length = 95 Back     information, alignment and structure
>d1w6ga2 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Length = 88 Back     information, alignment and structure
>d1w2za2 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 93 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query701
d1w6ga1417 Copper amine oxidase, domain 3 {Arthrobacter globi 100.0
d2oqea1436 Copper amine oxidase, domain 3 {Yeast (Hansenula p 100.0
d1w2za1441 Copper amine oxidase, domain 3 {Pea seedling (Pisu 100.0
d1d6za1424 Copper amine oxidase, domain 3 {Escherichia coli [ 100.0
d1w7ca1460 Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastor 100.0
d1w6ga3115 Copper amine oxidase, domains 1 and 2 {Arthrobacte 99.94
d1d6za3115 Copper amine oxidase, domains 1 and 2 {Escherichia 99.93
d1w2za3108 Copper amine oxidase, domains 1 and 2 {Pea seedlin 99.93
d2oqea3121 Copper amine oxidase, domains 1 and 2 {Yeast (Hans 99.92
d2oqea298 Copper amine oxidase, domains 1 and 2 {Yeast (Hans 99.84
d1d6za295 Copper amine oxidase, domains 1 and 2 {Escherichia 99.78
d1w2za293 Copper amine oxidase, domains 1 and 2 {Pea seedlin 99.75
d1w6ga288 Copper amine oxidase, domains 1 and 2 {Arthrobacte 99.75
d1w7ca2127 Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia 98.81
d1w7ca3146 Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia 91.41
>d1w6ga1 b.30.2.1 (A:212-628) Copper amine oxidase, domain 3 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
class: All beta proteins
fold: Supersandwich
superfamily: Amine oxidase catalytic domain
family: Amine oxidase catalytic domain
domain: Copper amine oxidase, domain 3
species: Arthrobacter globiformis [TaxId: 1665]

Probab=100.00  E-value=8e-145  Score=1185.90  Aligned_cols=415  Identities=46%  Similarity=0.849  Sum_probs=403.6

Q ss_pred             CCCCCCCCeecCCCCCeEEEc-ceeEeeeceEEEEEecCCcceEEEEEEEecCCCCceeEEEEeeeeeEEeecCCCCCcc
Q 005333          256 DRSDIKPLQIVQPEGPSFRVN-GHFVEWQKWNFRIGFTPREGLIIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNDPH  334 (701)
Q Consensus       256 ~r~~lkp~~i~QPeG~sF~V~-g~~V~W~~W~F~~gf~~reGl~L~dV~f~d~g~g~R~I~Yrlsl~Em~vpY~dp~~p~  334 (701)
                      .|+++||++|+||||+||+|+ ||+|+||+|+|||+|++|+||+||||+|+|++| .|+|+||+|||||+||||||++++
T Consensus         2 ~r~~~kp~~i~QP~G~~f~v~~g~~V~w~~W~f~~~f~~r~Gl~l~dv~~~~g~r-~r~i~Y~lsl~E~~vpY~~~~p~~   80 (417)
T d1w6ga1           2 LRTTQKPISITQPEGPSFTVTGGNHIEWEKWSLDVGFDVREGVVLHNIAFRDGDR-LRPIINRASIAEMVVPYGDPSPIR   80 (417)
T ss_dssp             CCCCCCCCCCCCTTCCSCEEETTTEEEETTEEEEEEEETTTEEEEEEEEEEETTE-EEEEEEEEEEEEEEEEBCCCCTTT
T ss_pred             CCCCCCCceeeCCCCCCEEECCCCEEEEcCCEEEEEeCCCcccEEEEEEEcCCCe-EeeEEEEecceeEEEECCCCCchh
Confidence            489999999999999999997 999999999999999999999999999998766 489999999999999999999999


Q ss_pred             ccceeeecCCCCCccCCCCCCCCCCCCCCeeEeeeeeecCCCceEEeeceEEeeeecCCccccccccCCCceeeeeccEE
Q 005333          335 YRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFAGGVDTIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRL  414 (701)
Q Consensus       335 ~~k~afD~geyG~G~~a~~L~~G~DCpg~i~YlD~~~~~~~g~p~~~~naICifE~d~G~l~rH~d~~~g~~~v~r~r~L  414 (701)
                      ++|+|||+||||||.+|++|++|||||++|+|||+++++++|+|++++|||||||+|.|++|||++++++..+++|+++|
T Consensus        81 ~~~~~~D~ge~G~G~~a~~L~~G~DCp~~a~y~D~~~~~~~g~p~~~~naiCifE~d~G~~~rh~~~~~~~~~~~r~~~L  160 (417)
T d1w6ga1          81 SWQNYFDTGEYLVGQYANSLELGCDCLGDITYLSPVISDAFGNPREIRNGICMHEEDWGILAKHSDLWSGINYTRRNRRM  160 (417)
T ss_dssp             TTCEEECCCCCCGGGGBCCCCBTTTBCSSCEEECCEEECTTSCEEECTTCEEEEEEEEEEEEEEECTTTCCEEEEEEEEE
T ss_pred             hhceeEeccccchhhhccccccCCCCCccCeEeeEEEecCCCCEEeccceEEEeecCCCceEEEEEecCCceeEEeeeeE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeeeecccceEEEEEEeccccEEEEEEEEEEEEeeeeCCCCcCCccceecCCCccccceeeEEEEEeeeccCCCCCC
Q 005333          415 SVSFICTVANYEYAFFWHFYQDGKIEAEVKLTGILSLGALQPGEVRKYGTIIAPGLYAPVHQHFFVARMDMAVDCKPGEA  494 (701)
Q Consensus       415 Vvr~i~TVgNYDYi~~~~F~~dGtIe~~v~aTG~l~t~~~~~~~~~~yGt~V~~~~~g~~HqH~f~~RlD~dVdG~~~g~  494 (701)
                      |||+|+|||||||||+|+|||||+||++|+|||||+++++.++ ...||++|+|+++|++|||+|||||||||||    +
T Consensus       161 Vvr~i~TvgNYdYi~~~~F~~dGsIe~~v~aTG~l~~~~~~~~-~~~~g~~v~~~~~g~~H~H~f~~RlD~dIdG----~  235 (417)
T d1w6ga1         161 VISFFTTIGNYDYGFYWYLYLDGTIEFEAKATGVVFTSAFPEG-GSDNISQLAPGLGAPFHQHIFSARLDMAIDG----F  235 (417)
T ss_dssp             EEEEEEEETTEEEEEEEEEETTSCEEEEEEEEECCCCEECCTT-CCSSEEEEETTEEEECEEEEEEEEEEECTTS----S
T ss_pred             EEEEEEEeeeeeEEEEEEEecCcEEEEEEEEEEEEEEeccCCC-CCCcccEeccCcccccccceeEEEeccccCC----C
Confidence            9999999999999999999999999999999999999988754 4589999999999999999999999999998    6


Q ss_pred             ccEEEEEeeeecCCCCCCCCCcceEEEEEEEehHHhhhhccCCCCCeEEEEecCCCcCCCCCceeEEEecCCCCCCCCCC
Q 005333          495 HNQVVEMNVKVEEPGKNNVHNNAFYAEEELLKSELQAMRDCNPLTARHWIIRNTRTVNRTGQLTGYKLVPGSNCLPLAGS  574 (701)
Q Consensus       495 ~Nsv~~~~~~~~~~~~~np~~~~~~~~~t~~~~e~~a~~~~~~~~~r~~~i~N~~~~N~~G~p~gYrl~p~~~~~~l~~~  574 (701)
                      +|||++.+++..+.++.||++++|.++++.+++|.+|+++++++++|+|+|+|++|+|++|+|+||||+|++++.+++.+
T Consensus       236 ~Nsv~~~~~~~~~~~~~~~~~~~~~~~~t~~~~E~~a~~~~~~~~~r~~~vvN~~k~N~~G~~~gYkl~p~~~~~~l~~~  315 (417)
T d1w6ga1         236 TNRVEEEDVVRQTMGPGNERGNAFSRKRTVLTRESEAVREADARTGRTWIISNPESKNRLNEPVGYKLHAHNQPTLLADP  315 (417)
T ss_dssp             CBEEEEEEEEECCSBTTBTTSCCEEEEEEEECBGGGCEECCCGGGTCEEEEEEEEEECTTSCEEEEEEEECCCCCCCSCT
T ss_pred             CceEEEEeeEEecCCCccccccEEEEEEEEEEehhhhhhcccccCccEEEEECCCCcCCCCCcceEEEccCCCCcccCCC
Confidence            99999999999988889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chhhhhhhcccccceEEeecCCCCcCCCCCCCCCCCCCCCChhhhcccCCceeeCCeEEEEeeccccCCCCCCCCCcccc
Q 005333          575 EAKVLRRAAFLKHNLWVTPYAHDEMYPGGEFPNQNPRVGEGLATWVEQNRSLEETDIVLWYVFGVTHIPRLEDWPVMPVD  654 (701)
Q Consensus       575 ~s~~~~ra~fa~~~lwVT~y~d~E~~asg~y~nq~~~~~~gl~~~~~~~esI~~eDiV~W~t~G~~HiPr~ED~Pvmp~~  654 (701)
                      +|...+||+||+||||||||+|+|+||||+|+||+.+ ++||++|+++||+|+|||||||+|||+||+||+|||||||++
T Consensus       316 ~s~~~~ra~fa~~~lwVT~y~d~E~~aag~y~nq~~~-~~~l~~~~~~~e~I~~~DiV~W~t~G~~H~Pr~ED~Pvmp~~  394 (417)
T d1w6ga1         316 GSSIARRAAFATKDLWVTRYADDERYPTGDFVNQHSG-GAGLPSYIAQDRDIDGQDIVVWHTFGLTHFPRVEDWPIMPVD  394 (417)
T ss_dssp             TSHHHHHTGGGGSSEEEEECCTTCCCTTCSCCBTCCS-SSSHHHHHTTCCBCTTBCEEEEEEEEEEECCCGGGSSSEEEE
T ss_pred             CchhhhcchhhcccEEEecCCCccccCCCCCccCCCC-CCChhHhhcCCCcccCCcEEEEEeCCcccCCChhhCCCCcce
Confidence            9999999999999999999999999999999999965 579999999999999999999999999999999999999999


Q ss_pred             eeeEEEEeCCCCCCCCCCCCCCC
Q 005333          655 RIGFMLMPHGFFNCSPAVDVPPN  677 (701)
Q Consensus       655 ~~~f~L~P~nFFd~nP~ld~p~s  677 (701)
                      ++||+|||+|||++||+||||||
T Consensus       395 ~~gf~L~P~nFF~~nPald~p~s  417 (417)
T d1w6ga1         395 TVGFKLRPEGFFDRSPVLDVPAN  417 (417)
T ss_dssp             EEEEEEEESSCSSSCTTTTCCCC
T ss_pred             eEEEEEECCCCCCCCCccCCCCC
Confidence            99999999999999999999987
>d2oqea1 b.30.2.1 (A:237-672) Copper amine oxidase, domain 3 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d1w2za1 b.30.2.1 (A:207-647) Copper amine oxidase, domain 3 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1d6za1 b.30.2.1 (A:301-724) Copper amine oxidase, domain 3 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w7ca1 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure
>d1w6ga3 d.17.2.1 (A:97-211) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1d6za3 d.17.2.1 (A:186-300) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w2za3 d.17.2.1 (A:99-206) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d2oqea3 d.17.2.1 (A:116-236) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d2oqea2 d.17.2.1 (A:18-115) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d1d6za2 d.17.2.1 (A:91-185) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w2za2 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1w6ga2 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1w7ca2 d.17.2.1 (A:43-169) Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure
>d1w7ca3 d.17.2.1 (A:170-315) Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure