Citrus Sinensis ID: 005370
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 699 | 2.2.26 [Sep-21-2011] | |||||||
| P51819 | 703 | Heat shock protein 83 OS= | N/A | no | 0.998 | 0.992 | 0.929 | 0.0 | |
| P27323 | 700 | Heat shock protein 90-1 O | yes | no | 1.0 | 0.998 | 0.894 | 0.0 | |
| Q69QQ6 | 699 | Heat shock protein 81-2 O | yes | no | 0.995 | 0.995 | 0.852 | 0.0 | |
| Q07078 | 699 | Heat shock protein 81-3 O | yes | no | 0.995 | 0.995 | 0.852 | 0.0 | |
| Q08277 | 715 | Heat shock protein 82 OS= | N/A | no | 0.998 | 0.976 | 0.856 | 0.0 | |
| P36181 | 699 | Heat shock cognate protei | N/A | no | 0.997 | 0.997 | 0.868 | 0.0 | |
| O03986 | 699 | Heat shock protein 90-4 O | no | no | 0.998 | 0.998 | 0.855 | 0.0 | |
| P55737 | 699 | Heat shock protein 90-2 O | no | no | 0.998 | 0.998 | 0.861 | 0.0 | |
| Q0J4P2 | 699 | Heat shock protein 81-1 O | yes | no | 0.995 | 0.995 | 0.854 | 0.0 | |
| A2YWQ1 | 699 | Heat shock protein 81-1 O | N/A | no | 0.995 | 0.995 | 0.854 | 0.0 |
| >sp|P51819|HSP83_IPONI Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=2 SV=1 | Back alignment and function desciption |
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Score = 1231 bits (3184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 650/699 (92%), Positives = 682/699 (97%), Gaps = 1/699 (0%)
Query: 1 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQ 60
MA+ ETFAFQAEINQLLSLIINTFYSNKEIFLRELISN+SDALDKIRFESLTDKSKLD Q
Sbjct: 6 MAEAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSKLDAQ 65
Query: 61 PELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQ 120
PELFIR++PDK NKTL+I+DSG+GM KADLVNNLGTIARSGTKEFMEALQAGADVSMIGQ
Sbjct: 66 PELFIRLVPDKTNKTLSIIDSGVGMAKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQ 125
Query: 121 FGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKE 180
FGVGFYSAYLVAE+V+VTTKHNDDEQYIWESQAGGSFTVTRDV GE LGRGTK+TL+LKE
Sbjct: 126 FGVGFYSAYLVAEKVIVTTKHNDDEQYIWESQAGGSFTVTRDVDGEQLGRGTKITLFLKE 185
Query: 181 DQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISDDEDDEPKKEEEGDVEDVDEE 240
DQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISDDEDDEPKKEEEGD+E+VDE+
Sbjct: 186 DQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISDDEDDEPKKEEEGDIEEVDED 245
Query: 241 KEKEGKKKKKIKEVSHEWQLINKQKPIWLRKPEEITKEEYASFYKSLTNDWEDHLAVKHF 300
KEKEGKKKKKIKEVSHEWQLINKQKPIWLRKPEEITKEEYASFYKSLTNDWEDHLAVKHF
Sbjct: 246 KEKEGKKKKKIKEVSHEWQLINKQKPIWLRKPEEITKEEYASFYKSLTNDWEDHLAVKHF 305
Query: 301 SVEGQLEFKAVLFVPKRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEYLGFIKGVV 360
SVEGQLEFKA+LFVPKRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEYLGF+KGVV
Sbjct: 306 SVEGQLEFKAILFVPKRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEYLGFVKGVV 365
Query: 361 DSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYNKFYDAFSKNLKLGI 420
DSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENK+DYNKFY+AFSKNLKLGI
Sbjct: 366 DSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKDDYNKFYEAFSKNLKLGI 425
Query: 421 HEDSQNRAKLADLLRYHSTKSSEEFTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLE 480
HEDSQNRAKLADLLRY+STKS +E TSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLE
Sbjct: 426 HEDSQNRAKLADLLRYYSTKSGDELTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLE 485
Query: 481 RLKKKGYEVLYMVDAIDEYAVGQLKEYEGKKLVSATKEGLKLDDETEEEKKKKEEKKKSF 540
RLKKKGYEVL+MVDAIDEYAVGQLKEY+GKKLVSATKEGLKL+D+ EEEKKK+EEKKKSF
Sbjct: 486 RLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLEDDDEEEKKKREEKKKSF 545
Query: 541 ENLCKTMKDILGDRVEKVVVSDRIVDSPCCLVTGEYGWSANMERIMKAQALRDNSMSSYM 600
ENLCK +KDILGD+VEKVVVSDRIVDSPCCLVTGEYGW+ANMERIMKAQALRD+SMSSYM
Sbjct: 546 ENLCKIIKDILGDKVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSSYM 605
Query: 601 SSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLTMLLFETALLTSGFSLDDPNTFGSRI 660
SSKKTMEINPDNGIMEELRKRAEADKNDKSVKDL +LLFETALLTSGFSLDDPNTFG+RI
Sbjct: 606 SSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGARI 665
Query: 661 HRMLKLGLSIDEEENADEDIDMPALEEDGAEESKMEEVD 699
HRMLKLGLSIDEEE D D DMPALEE+ EESKMEEVD
Sbjct: 666 HRMLKLGLSIDEEEAGD-DADMPALEEEAGEESKMEEVD 703
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Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co-chaperones that modulate its substrate recognition, ATPase cycle and chaperone function. Ipomoea nil (taxid: 35883) |
| >sp|P27323|HS901_ARATH Heat shock protein 90-1 OS=Arabidopsis thaliana GN=HSP90-1 PE=1 SV=3 | Back alignment and function description |
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| >sp|Q69QQ6|HSP82_ORYSJ Heat shock protein 81-2 OS=Oryza sativa subsp. japonica GN=HSP81-2 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q07078|HSP83_ORYSJ Heat shock protein 81-3 OS=Oryza sativa subsp. japonica GN=HSP81-3 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q08277|HSP82_MAIZE Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV=1 | Back alignment and function description |
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| >sp|P36181|HSP80_SOLLC Heat shock cognate protein 80 OS=Solanum lycopersicum GN=HSC80 PE=2 SV=1 | Back alignment and function description |
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| >sp|O03986|HS904_ARATH Heat shock protein 90-4 OS=Arabidopsis thaliana GN=HSP90-4 PE=2 SV=1 | Back alignment and function description |
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| >sp|P55737|HS902_ARATH Heat shock protein 90-2 OS=Arabidopsis thaliana GN=HSP90-2 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q0J4P2|HSP81_ORYSJ Heat shock protein 81-1 OS=Oryza sativa subsp. japonica GN=HSP81-1 PE=2 SV=2 | Back alignment and function description |
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| >sp|A2YWQ1|HSP81_ORYSI Heat shock protein 81-1 OS=Oryza sativa subsp. indica GN=HSP81-1 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 699 | ||||||
| 356530818 | 699 | PREDICTED: heat shock protein 83-like [G | 1.0 | 1.0 | 0.935 | 0.0 | |
| 449445987 | 703 | PREDICTED: heat shock protein 83-like [C | 0.998 | 0.992 | 0.932 | 0.0 | |
| 356559744 | 699 | PREDICTED: heat shock protein 83-like [G | 1.0 | 1.0 | 0.932 | 0.0 | |
| 312283005 | 705 | unnamed protein product [Thellungiella h | 1.0 | 0.991 | 0.924 | 0.0 | |
| 33326375 | 698 | heat shock protein [Hevea brasiliensis] | 0.998 | 1.0 | 0.937 | 0.0 | |
| 224134805 | 703 | predicted protein [Populus trichocarpa] | 0.998 | 0.992 | 0.935 | 0.0 | |
| 224077478 | 703 | predicted protein [Populus trichocarpa] | 0.998 | 0.992 | 0.931 | 0.0 | |
| 255545176 | 703 | heat shock protein, putative [Ricinus co | 0.998 | 0.992 | 0.942 | 0.0 | |
| 225464589 | 704 | PREDICTED: heat shock protein 83-like [V | 0.998 | 0.991 | 0.921 | 0.0 | |
| 1708314 | 703 | RecName: Full=Heat shock protein 83 gi|1 | 0.998 | 0.992 | 0.929 | 0.0 |
| >gi|356530818|ref|XP_003533977.1| PREDICTED: heat shock protein 83-like [Glycine max] | Back alignment and taxonomy information |
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Score = 1271 bits (3288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 654/699 (93%), Positives = 682/699 (97%)
Query: 1 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQ 60
MAD ETFAFQAEINQLLSLIINTFYSNKEIFLRELISN+SDALDKIRFESLTDKSKLD Q
Sbjct: 1 MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSKLDAQ 60
Query: 61 PELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQ 120
PELFIR++PDK NKTL+I+DSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQ
Sbjct: 61 PELFIRLVPDKDNKTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQ 120
Query: 121 FGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKE 180
FGVGFYSAYLVAE+V+VTTKHNDDEQYIWESQAGGSFTVTRD GE LGRGTK+TL+LKE
Sbjct: 121 FGVGFYSAYLVAEKVIVTTKHNDDEQYIWESQAGGSFTVTRDTDGEQLGRGTKITLFLKE 180
Query: 181 DQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISDDEDDEPKKEEEGDVEDVDEE 240
DQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISDDEDDEPKKEEEGD+EDVDEE
Sbjct: 181 DQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISDDEDDEPKKEEEGDIEDVDEE 240
Query: 241 KEKEGKKKKKIKEVSHEWQLINKQKPIWLRKPEEITKEEYASFYKSLTNDWEDHLAVKHF 300
KEK+ KKKKKIKEVSHEWQLINKQKPIWLRKPEEITK+EYASFYKSLTNDWE+HLAVKHF
Sbjct: 241 KEKDSKKKKKIKEVSHEWQLINKQKPIWLRKPEEITKDEYASFYKSLTNDWEEHLAVKHF 300
Query: 301 SVEGQLEFKAVLFVPKRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEYLGFIKGVV 360
SVEGQLEFKA+LFVPKRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEYLGF+KGVV
Sbjct: 301 SVEGQLEFKAILFVPKRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEYLGFVKGVV 360
Query: 361 DSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYNKFYDAFSKNLKLGI 420
DSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYNKFYDAFSKNLKLGI
Sbjct: 361 DSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYNKFYDAFSKNLKLGI 420
Query: 421 HEDSQNRAKLADLLRYHSTKSSEEFTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLE 480
HEDSQNR+KLADLLRYHSTKS +E TSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLE
Sbjct: 421 HEDSQNRSKLADLLRYHSTKSGDEMTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLE 480
Query: 481 RLKKKGYEVLYMVDAIDEYAVGQLKEYEGKKLVSATKEGLKLDDETEEEKKKKEEKKKSF 540
RLKKKGYEVL+MVDAIDEYAVGQLKEY+GKKLVSATKEGLKLDDETEEEKKKKEEKKKSF
Sbjct: 481 RLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLDDETEEEKKKKEEKKKSF 540
Query: 541 ENLCKTMKDILGDRVEKVVVSDRIVDSPCCLVTGEYGWSANMERIMKAQALRDNSMSSYM 600
+ LCK +KDILGD+VEKVVVSDRIVDSPCCLVTGEYGWSANMERIMKAQALRD+SMS YM
Sbjct: 541 DELCKVIKDILGDKVEKVVVSDRIVDSPCCLVTGEYGWSANMERIMKAQALRDSSMSGYM 600
Query: 601 SSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLTMLLFETALLTSGFSLDDPNTFGSRI 660
SSKKTMEINPDNGIMEELRKRAEADKNDKSVKDL +LLFETALLTSGFSLDDPNTF SRI
Sbjct: 601 SSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFASRI 660
Query: 661 HRMLKLGLSIDEEENADEDIDMPALEEDGAEESKMEEVD 699
HRMLKLGLSIDE++N +D+DMP LEEDGAEESKMEEVD
Sbjct: 661 HRMLKLGLSIDEDDNGGDDVDMPPLEEDGAEESKMEEVD 699
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449445987|ref|XP_004140753.1| PREDICTED: heat shock protein 83-like [Cucumis sativus] gi|449485495|ref|XP_004157188.1| PREDICTED: heat shock protein 83-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356559744|ref|XP_003548157.1| PREDICTED: heat shock protein 83-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|312283005|dbj|BAJ34368.1| unnamed protein product [Thellungiella halophila] | Back alignment and taxonomy information |
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| >gi|33326375|gb|AAQ08597.1| heat shock protein [Hevea brasiliensis] | Back alignment and taxonomy information |
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| >gi|224134805|ref|XP_002327494.1| predicted protein [Populus trichocarpa] gi|222836048|gb|EEE74469.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224077478|ref|XP_002305263.1| predicted protein [Populus trichocarpa] gi|222848227|gb|EEE85774.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|255545176|ref|XP_002513649.1| heat shock protein, putative [Ricinus communis] gi|223547557|gb|EEF49052.1| heat shock protein, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|225464589|ref|XP_002274022.1| PREDICTED: heat shock protein 83-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|1708314|sp|P51819.1|HSP83_IPONI RecName: Full=Heat shock protein 83 gi|169296|gb|AAA33748.1| heat shock protein 83 [Ipomoea nil] gi|445625|prf||1909372A heat shock protein 83 | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 699 | ||||||
| TAIR|locus:2161790 | 699 | HSP81-3 "heat shock protein 81 | 0.636 | 0.636 | 0.780 | 3.4e-290 | |
| TAIR|locus:2161775 | 699 | Hsp81.4 "HEAT SHOCK PROTEIN 81 | 0.636 | 0.636 | 0.776 | 5.5e-290 | |
| UNIPROTKB|Q76LV2 | 733 | HSP90AA1 "Heat shock protein H | 0.625 | 0.596 | 0.662 | 7.6e-242 | |
| UNIPROTKB|P07900 | 732 | HSP90AA1 "Heat shock protein H | 0.625 | 0.596 | 0.662 | 7.6e-242 | |
| UNIPROTKB|O02705 | 733 | HSP90AA1 "Heat shock protein H | 0.625 | 0.596 | 0.662 | 7.6e-242 | |
| UNIPROTKB|Q9GKX7 | 733 | HSP90AA1 "Heat shock protein H | 0.625 | 0.596 | 0.662 | 7.6e-242 | |
| RGD|631409 | 733 | Hsp90aa1 "heat shock protein 9 | 0.625 | 0.596 | 0.658 | 6.8e-241 | |
| MGI|MGI:96250 | 733 | Hsp90aa1 "heat shock protein 9 | 0.625 | 0.596 | 0.658 | 8.6e-241 | |
| UNIPROTKB|P11501 | 728 | HSP90AA1 "Heat shock protein H | 0.625 | 0.600 | 0.658 | 4.7e-240 | |
| UNIPROTKB|P46633 | 733 | HSP90AA1 "Heat shock protein H | 0.625 | 0.596 | 0.649 | 4.3e-239 |
| TAIR|locus:2161790 HSP81-3 "heat shock protein 81-3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1820 (645.7 bits), Expect = 3.4e-290, Sum P(2) = 3.4e-290
Identities = 349/447 (78%), Positives = 384/447 (85%)
Query: 254 VSHEWQLINKQKPIWLRKPEEITKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAVLF 313
VSHEW L+NKQKPIW+RKPEEI KEEYA+FYKSL+NDWE+HLAVKHFSVEGQLEFKA+LF
Sbjct: 254 VSHEWDLVNKQKPIWMRKPEEINKEEYAAFYKSLSNDWEEHLAVKHFSVEGQLEFKAILF 313
Query: 314 VPKRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEYLGFIKGVVDSDDLPLNISREM 373
VPKRAPFDLFDT+KK NNIKLYVRRVFIMDNCE++IPEYLGF+KG+VDS+DLPLNISRE
Sbjct: 314 VPKRAPFDLFDTKKKPNNIKLYVRRVFIMDNCEDIIPEYLGFVKGIVDSEDLPLNISRET 373
Query: 374 LQQNKILKVIRKNLVKKCIEMFNEIAENKEDYNKFYDAFSKNLKLGIHEDSQNRAKLADL 433
LQQNKILKVIRKNLVKKC+E+F EIAENKEDYNKFY+AFSKNLKLGIHEDSQNR K+A+L
Sbjct: 374 LQQNKILKVIRKNLVKKCLELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSQNRTKIAEL 433
Query: 434 LRYHSTKSSEEFTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLERLKKKGYEVLYMV 493
LRYHSTKS +E TSLKDYVTRMKEGQ DI+YITGESKKAVENSPFLE+LKKKG EVLYMV
Sbjct: 434 LRYHSTKSGDELTSLKDYVTRMKEGQNDIFYITGESKKAVENSPFLEKLKKKGIEVLYMV 493
Query: 494 DAIDEYAVGQLKEYEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXSFENLCKTMKDILGD 553
DAIDEYA+GQLKE+EGKKLVSAT FE LCK +KD+LGD
Sbjct: 494 DAIDEYAIGQLKEFEGKKLVSATKEGLKLDETEDEKKKKEELKE-KFEGLCKVIKDVLGD 552
Query: 554 RVEKVVVSDRIVDSPCCLVTGEYGWSANMERIMKAQALRDNXXXXXXXXXXTMEINPDNG 613
+VEKV+VSDR+VDSPCCLVTGEYGW+ANMERIMKAQALRD+ TMEINP+N
Sbjct: 553 KVEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMGGYMSSKKTMEINPENS 612
Query: 614 IMEELRKRAEADKNDKSVKDLTMLLFETALLTSGFSLDDPNTFGSRIHRMLKLGLSXXXX 673
IM+ELRKRA+ADKNDKSVKDL +LLFETALLTSGFSLD+PNTFGSRIHRMLKLGLS
Sbjct: 613 IMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDEPNTFGSRIHRMLKLGLSIDDD 672
Query: 674 XXXXXXXXMPALEEDG-AEESKMEEVD 699
MP LE+D AE SKMEEVD
Sbjct: 673 DVVEADADMPPLEDDADAEGSKMEEVD 699
|
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| TAIR|locus:2161775 Hsp81.4 "HEAT SHOCK PROTEIN 81.4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q76LV2 HSP90AA1 "Heat shock protein HSP 90-alpha" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P07900 HSP90AA1 "Heat shock protein HSP 90-alpha" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|O02705 HSP90AA1 "Heat shock protein HSP 90-alpha" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9GKX7 HSP90AA1 "Heat shock protein HSP 90-alpha" [Equus caballus (taxid:9796)] | Back alignment and assigned GO terms |
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| RGD|631409 Hsp90aa1 "heat shock protein 90, alpha (cytosolic), class A member 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| MGI|MGI:96250 Hsp90aa1 "heat shock protein 90, alpha (cytosolic), class A member 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P11501 HSP90AA1 "Heat shock protein HSP 90-alpha" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P46633 HSP90AA1 "Heat shock protein HSP 90-alpha" [Cricetulus griseus (taxid:10029)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P24724 | HSP90_THEPA | No assigned EC number | 0.6741 | 0.9942 | 0.9639 | yes | no |
| Q4R4T5 | HS90B_MACFA | No assigned EC number | 0.6918 | 0.9885 | 0.9544 | N/A | no |
| P46598 | HSP90_CANAL | No assigned EC number | 0.6600 | 0.9971 | 0.9858 | N/A | no |
| Q5R710 | HS90B_PONAB | No assigned EC number | 0.6904 | 0.9885 | 0.9544 | yes | no |
| Q08277 | HSP82_MAIZE | No assigned EC number | 0.8565 | 0.9985 | 0.9762 | N/A | no |
| P41887 | HSP90_SCHPO | No assigned EC number | 0.6638 | 0.9899 | 0.9829 | yes | no |
| P55737 | HS902_ARATH | No assigned EC number | 0.8614 | 0.9985 | 0.9985 | no | no |
| P07900 | HS90A_HUMAN | No assigned EC number | 0.6958 | 0.9928 | 0.9480 | yes | no |
| P07901 | HS90A_MOUSE | No assigned EC number | 0.6976 | 0.9928 | 0.9467 | yes | no |
| P36181 | HSP80_SOLLC | No assigned EC number | 0.8687 | 0.9971 | 0.9971 | N/A | no |
| Q7PT10 | HSP83_ANOGA | No assigned EC number | 0.7134 | 0.9556 | 0.9277 | yes | no |
| Q69QQ6 | HSP82_ORYSJ | No assigned EC number | 0.8526 | 0.9957 | 0.9957 | yes | no |
| O02705 | HS90A_PIG | No assigned EC number | 0.6934 | 0.9928 | 0.9467 | yes | no |
| Q25293 | HSP83_LEIIN | No assigned EC number | 0.6661 | 0.9527 | 0.9500 | yes | no |
| O44001 | HSP90_EIMTE | No assigned EC number | 0.7132 | 0.9971 | 0.9775 | N/A | no |
| Q61W58 | HSP90_CAEBR | No assigned EC number | 0.6790 | 0.9856 | 0.9759 | N/A | no |
| Q4UDU8 | HSP90_THEAN | No assigned EC number | 0.6689 | 0.9942 | 0.9626 | yes | no |
| Q9GKX7 | HS90A_HORSE | No assigned EC number | 0.6990 | 0.9928 | 0.9467 | yes | no |
| P27741 | HSP83_LEIAM | No assigned EC number | 0.6622 | 0.9513 | 0.9486 | N/A | no |
| Q0J4P2 | HSP81_ORYSJ | No assigned EC number | 0.8540 | 0.9957 | 0.9957 | yes | no |
| P27323 | HS901_ARATH | No assigned EC number | 0.8942 | 1.0 | 0.9985 | yes | no |
| P46633 | HS90A_CRIGR | No assigned EC number | 0.6907 | 0.9928 | 0.9467 | yes | no |
| Q07078 | HSP83_ORYSJ | No assigned EC number | 0.8526 | 0.9957 | 0.9957 | yes | no |
| O43109 | HSP90_PODAS | No assigned EC number | 0.6676 | 0.9384 | 0.9358 | yes | no |
| P12861 | HSP83_TRYBB | No assigned EC number | 0.6590 | 0.9928 | 0.9871 | N/A | no |
| Q90474 | H90A1_DANRE | No assigned EC number | 0.6820 | 0.9914 | 0.9558 | yes | no |
| P02828 | HSP83_DROME | No assigned EC number | 0.6736 | 0.9928 | 0.9679 | yes | no |
| P54651 | HSC90_DICDI | No assigned EC number | 0.6888 | 0.9842 | 0.9828 | yes | no |
| P51819 | HSP83_IPONI | No assigned EC number | 0.9298 | 0.9985 | 0.9928 | N/A | no |
| P51818 | HS903_ARATH | No assigned EC number | 0.86 | 0.9985 | 0.9985 | no | no |
| O02192 | HSP83_DROAV | No assigned EC number | 0.6759 | 0.9928 | 0.9692 | N/A | no |
| Q04619 | HS90B_CHICK | No assigned EC number | 0.6824 | 0.9928 | 0.9572 | yes | no |
| Q76LV2 | HS90A_BOVIN | No assigned EC number | 0.6990 | 0.9928 | 0.9467 | yes | no |
| O03986 | HS904_ARATH | No assigned EC number | 0.8557 | 0.9985 | 0.9985 | no | no |
| O61998 | HSP90_BRUPA | No assigned EC number | 0.6764 | 0.9885 | 0.9637 | N/A | no |
| A2YWQ1 | HSP81_ORYSI | No assigned EC number | 0.8540 | 0.9957 | 0.9957 | N/A | no |
| Q18688 | HSP90_CAEEL | No assigned EC number | 0.6747 | 0.9899 | 0.9857 | yes | no |
| P04809 | HSP83_DROPS | No assigned EC number | 0.6722 | 0.9928 | 0.9679 | yes | no |
| Q4R4P1 | HS90A_MACFA | No assigned EC number | 0.6934 | 0.9928 | 0.9467 | N/A | no |
| P06660 | HSP85_TRYCR | No assigned EC number | 0.6715 | 0.9599 | 0.9531 | N/A | no |
| P30946 | HS90A_RABIT | No assigned EC number | 0.6984 | 0.9628 | 0.9697 | yes | no |
| P82995 | HS90A_RAT | No assigned EC number | 0.6976 | 0.9928 | 0.9467 | yes | no |
| A5A6K9 | HS90A_PANTR | No assigned EC number | 0.6920 | 0.9928 | 0.9467 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 699 | |||
| PTZ00272 | 701 | PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp | 0.0 | |
| pfam00183 | 529 | pfam00183, HSP90, Hsp90 protein | 0.0 | |
| PRK05218 | 613 | PRK05218, PRK05218, heat shock protein 90; Provisi | 0.0 | |
| COG0326 | 623 | COG0326, HtpG, Molecular chaperone, HSP90 family [ | 0.0 | |
| PTZ00130 | 814 | PTZ00130, PTZ00130, heat shock protein 90; Provisi | 1e-166 | |
| PRK14083 | 601 | PRK14083, PRK14083, HSP90 family protein; Provisio | 4e-27 | |
| pfam02518 | 111 | pfam02518, HATPase_c, Histidine kinase-, DNA gyras | 2e-12 | |
| smart00387 | 111 | smart00387, HATPase_c, Histidine kinase-like ATPas | 4e-10 | |
| cd00075 | 103 | cd00075, HATPase_c, Histidine kinase-like ATPases; | 9e-09 | |
| pfam13589 | 134 | pfam13589, HATPase_c_3, Histidine kinase-, DNA gyr | 6e-05 | |
| PRK14083 | 601 | PRK14083, PRK14083, HSP90 family protein; Provisio | 9e-05 |
| >gnl|CDD|240341 PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp83); Provisional | Back alignment and domain information |
|---|
Score = 925 bits (2392), Expect = 0.0
Identities = 465/702 (66%), Positives = 584/702 (83%), Gaps = 8/702 (1%)
Query: 4 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPEL 63
TETFAFQAEINQL+SLIINTFYSNKEIFLRELISN+SDA DKIR++SLTD S L P L
Sbjct: 2 TETFAFQAEINQLMSLIINTFYSNKEIFLRELISNASDACDKIRYQSLTDPSVLGESPRL 61
Query: 64 FIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGV 123
IR++PDK NKTLT+ D+GIGMTKADLVNNLGTIARSGTK FMEAL+AG D+SMIGQFGV
Sbjct: 62 CIRVVPDKENKTLTVEDNGIGMTKADLVNNLGTIARSGTKAFMEALEAGGDMSMIGQFGV 121
Query: 124 GFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQL 183
GFYSAYLVA+RV VT+K+N DE Y+WES AGG+FT+T + RGT++TL+LKEDQ+
Sbjct: 122 GFYSAYLVADRVTVTSKNNSDESYVWESSAGGTFTIT-STPESDMKRGTRITLHLKEDQM 180
Query: 184 EYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD-DEDDEPKKEEEGD---VEDVDE 239
EYLE RR+K+L+KKHSEFI Y I L EKTTEKE++D DE+D K +E+G+ VE+V E
Sbjct: 181 EYLEPRRLKELIKKHSEFIGYDIELMVEKTTEKEVTDEDEEDTKKADEDGEEPKVEEVKE 240
Query: 240 EKEKEGKKKKKIKEVSHEWQLINKQKPIWLRKPEEITKEEYASFYKSLTNDWEDHLAVKH 299
E + KK KK+KEV+ E+++ NK KP+W R P+++TKEEYA+FYK+++NDWED A KH
Sbjct: 241 GDEGKKKKTKKVKEVTKEYEVQNKHKPLWTRDPKDVTKEEYAAFYKAISNDWEDPAATKH 300
Query: 300 FSVEGQLEFKAVLFVPKRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEYLGFIKGV 359
FSVEGQLEF++++FVPKRAPFD+F+ KK NNIKLYVRRVFIMDNCE+L P++LGF+KGV
Sbjct: 301 FSVEGQLEFRSIMFVPKRAPFDMFEPNKKRNNIKLYVRRVFIMDNCEDLCPDWLGFVKGV 360
Query: 360 VDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYNKFYDAFSKNLKLG 419
VDS+DLPLNISRE LQQNKILKVIRKN+VKKC+EMF+E+AENKEDY +FY+ F KN+KLG
Sbjct: 361 VDSEDLPLNISRENLQQNKILKVIRKNIVKKCLEMFDEVAENKEDYKQFYEQFGKNIKLG 420
Query: 420 IHEDSQNRAKLADLLRYHSTKSSEEFTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFL 479
IHED+ NR KL +LLR++ST+S EE T+LKDYVTRMK GQK IYYITG+SKK +E SPF+
Sbjct: 421 IHEDTANRKKLMELLRFYSTESGEEMTTLKDYVTRMKAGQKSIYYITGDSKKKLETSPFI 480
Query: 480 ERLKKKGYEVLYMVDAIDEYAVGQLKEYEGKKLVSATKEGLKLDDETEEEKKKKEEKKKS 539
E+ +++G EVL+M + IDEY + Q+K++E KK TKEG+ +E+EEEK+++EE+K +
Sbjct: 481 EQARRRGLEVLFMTEPIDEYVMQQVKDFEDKKFACLTKEGVHF-EESEEEKQQREEEKAA 539
Query: 540 FENLCKTMKDILGDRVEKVVVSDRIVDSPCCLVTGEYGWSANMERIMKAQALRDNSMSSY 599
E LCKTMK++LGD+VEKV+VS+R+ SPC LVT E+GWSA+ME+IM+ QALRD+SM+ Y
Sbjct: 540 CEKLCKTMKEVLGDKVEKVIVSERLSTSPCILVTSEFGWSAHMEQIMRNQALRDSSMAQY 599
Query: 600 MSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLTMLLFETALLTSGFSLDDPNTFGSR 659
M SKKTME+NP + I++ELR+R AD+NDK+VKDL LLF+T+LLTSGF L+DP + R
Sbjct: 600 MMSKKTMELNPRHPIIKELRRRVGADENDKAVKDLVFLLFDTSLLTSGFQLEDPTGYAER 659
Query: 660 IHRMLKLGLSIDEE--ENADEDIDMPALEEDGAEESKMEEVD 699
I+RM+KLGLS+DEE E A+ + A E A S ME+VD
Sbjct: 660 INRMIKLGLSLDEEEEEAAEAPVAETAPAEVTAGTSSMEQVD 701
|
Length = 701 |
| >gnl|CDD|215774 pfam00183, HSP90, Hsp90 protein | Back alignment and domain information |
|---|
| >gnl|CDD|235366 PRK05218, PRK05218, heat shock protein 90; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223403 COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >gnl|CDD|185466 PTZ00130, PTZ00130, heat shock protein 90; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237603 PRK14083, PRK14083, HSP90 family protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|217081 pfam02518, HATPase_c, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | Back alignment and domain information |
|---|
| >gnl|CDD|214643 smart00387, HATPase_c, Histidine kinase-like ATPases | Back alignment and domain information |
|---|
| >gnl|CDD|238030 cd00075, HATPase_c, Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins | Back alignment and domain information |
|---|
| >gnl|CDD|222246 pfam13589, HATPase_c_3, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | Back alignment and domain information |
|---|
| >gnl|CDD|237603 PRK14083, PRK14083, HSP90 family protein; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 699 | |||
| PTZ00272 | 701 | heat shock protein 83 kDa (Hsp83); Provisional | 100.0 | |
| PTZ00130 | 814 | heat shock protein 90; Provisional | 100.0 | |
| KOG0020 | 785 | consensus Endoplasmic reticulum glucose-regulated | 100.0 | |
| COG0326 | 623 | HtpG Molecular chaperone, HSP90 family [Posttransl | 100.0 | |
| KOG0019 | 656 | consensus Molecular chaperone (HSP90 family) [Post | 100.0 | |
| PRK05218 | 613 | heat shock protein 90; Provisional | 100.0 | |
| PRK14083 | 601 | HSP90 family protein; Provisional | 100.0 | |
| PF00183 | 531 | HSP90: Hsp90 protein; InterPro: IPR001404 Molecula | 100.0 | |
| PF13589 | 137 | HATPase_c_3: Histidine kinase-, DNA gyrase B-, and | 99.67 | |
| TIGR00585 | 312 | mutl DNA mismatch repair protein MutL. All protein | 99.45 | |
| PRK00095 | 617 | mutL DNA mismatch repair protein; Reviewed | 99.34 | |
| COG1389 | 538 | DNA topoisomerase VI, subunit B [DNA replication, | 99.31 | |
| COG0323 | 638 | MutL DNA mismatch repair enzyme (predicted ATPase) | 99.21 | |
| PRK04184 | 535 | DNA topoisomerase VI subunit B; Validated | 99.14 | |
| TIGR01052 | 488 | top6b DNA topoisomerase VI, B subunit. This model | 98.99 | |
| PRK14868 | 795 | DNA topoisomerase VI subunit B; Provisional | 98.97 | |
| PRK14867 | 659 | DNA topoisomerase VI subunit B; Provisional | 98.54 | |
| TIGR01055 | 625 | parE_Gneg DNA topoisomerase IV, B subunit, proteob | 98.53 | |
| PRK05559 | 631 | DNA topoisomerase IV subunit B; Reviewed | 98.47 | |
| PF02518 | 111 | HATPase_c: Histidine kinase-, DNA gyrase B-, and H | 98.46 | |
| smart00433 | 594 | TOP2c TopoisomeraseII. Eukaryotic DNA topoisomeras | 98.42 | |
| PRK05644 | 638 | gyrB DNA gyrase subunit B; Validated | 98.33 | |
| TIGR01059 | 654 | gyrB DNA gyrase, B subunit. This model describes t | 98.28 | |
| KOG1979 | 694 | consensus DNA mismatch repair protein - MLH1 famil | 98.25 | |
| PRK14939 | 756 | gyrB DNA gyrase subunit B; Provisional | 98.23 | |
| KOG1978 | 672 | consensus DNA mismatch repair protein - MLH2/PMS1/ | 98.18 | |
| KOG1977 | 1142 | consensus DNA mismatch repair protein - MLH3 famil | 97.69 | |
| TIGR01058 | 637 | parE_Gpos DNA topoisomerase IV, B subunit, Gram-po | 97.32 | |
| PRK10755 | 356 | sensor protein BasS/PmrB; Provisional | 97.3 | |
| cd00075 | 103 | HATPase_c Histidine kinase-like ATPases; This fami | 97.3 | |
| TIGR02916 | 679 | PEP_his_kin putative PEP-CTERM system histidine ki | 97.16 | |
| PRK10604 | 433 | sensor protein RstB; Provisional | 97.07 | |
| PRK10549 | 466 | signal transduction histidine-protein kinase BaeS; | 96.94 | |
| PRK11100 | 475 | sensory histidine kinase CreC; Provisional | 96.89 | |
| smart00387 | 111 | HATPase_c Histidine kinase-like ATPases. Histidine | 96.88 | |
| TIGR02938 | 494 | nifL_nitrog nitrogen fixation negative regulator N | 96.84 | |
| PRK11086 | 542 | sensory histidine kinase DcuS; Provisional | 96.83 | |
| TIGR01386 | 457 | cztS_silS_copS heavy metal sensor kinase. Members | 96.82 | |
| PRK10364 | 457 | sensor protein ZraS; Provisional | 96.8 | |
| COG0187 | 635 | GyrB Type IIA topoisomerase (DNA gyrase/topo II, t | 96.78 | |
| PLN03237 | 1465 | DNA topoisomerase 2; Provisional | 96.73 | |
| PRK10815 | 485 | sensor protein PhoQ; Provisional | 96.7 | |
| PRK15053 | 545 | dpiB sensor histidine kinase DpiB; Provisional | 96.62 | |
| PRK15347 | 921 | two component system sensor kinase SsrA; Provision | 96.6 | |
| PRK11006 | 430 | phoR phosphate regulon sensor protein; Provisional | 96.57 | |
| PRK11466 | 914 | hybrid sensory histidine kinase TorS; Provisional | 96.54 | |
| PTZ00108 | 1388 | DNA topoisomerase 2-like protein; Provisional | 96.52 | |
| PLN03128 | 1135 | DNA topoisomerase 2; Provisional | 96.47 | |
| PRK09470 | 461 | cpxA two-component sensor protein; Provisional | 96.46 | |
| TIGR02956 | 968 | TMAO_torS TMAO reductase sytem sensor TorS. This p | 96.39 | |
| PRK11360 | 607 | sensory histidine kinase AtoS; Provisional | 96.38 | |
| PRK09467 | 435 | envZ osmolarity sensor protein; Provisional | 96.29 | |
| PHA02569 | 602 | 39 DNA topoisomerase II large subunit; Provisional | 96.26 | |
| TIGR03785 | 703 | marine_sort_HK proteobacterial dedicated sortase s | 96.23 | |
| PRK09303 | 380 | adaptive-response sensory kinase; Validated | 96.23 | |
| COG3290 | 537 | CitA Signal transduction histidine kinase regulati | 96.18 | |
| TIGR02966 | 333 | phoR_proteo phosphate regulon sensor kinase PhoR. | 96.05 | |
| PTZ00109 | 903 | DNA gyrase subunit b; Provisional | 95.97 | |
| TIGR01925 | 137 | spIIAB anti-sigma F factor. This model describes t | 95.9 | |
| PRK10337 | 449 | sensor protein QseC; Provisional | 95.87 | |
| PRK09835 | 482 | sensor kinase CusS; Provisional | 95.77 | |
| PRK10618 | 894 | phosphotransfer intermediate protein in two-compon | 95.73 | |
| PRK03660 | 146 | anti-sigma F factor; Provisional | 95.71 | |
| PRK11091 | 779 | aerobic respiration control sensor protein ArcB; P | 95.69 | |
| PRK04069 | 161 | serine-protein kinase RsbW; Provisional | 95.58 | |
| PRK13837 | 828 | two-component VirA-like sensor kinase; Provisional | 95.16 | |
| PRK10490 | 895 | sensor protein KdpD; Provisional | 95.02 | |
| COG4191 | 603 | Signal transduction histidine kinase regulating C4 | 94.96 | |
| PRK11107 | 919 | hybrid sensory histidine kinase BarA; Provisional | 94.96 | |
| PF13581 | 125 | HATPase_c_2: Histidine kinase-like ATPase domain | 94.93 | |
| PRK10547 | 670 | chemotaxis protein CheA; Provisional | 94.89 | |
| PRK10600 | 569 | nitrate/nitrite sensor protein NarX; Provisional | 94.88 | |
| PRK10841 | 924 | hybrid sensory kinase in two-component regulatory | 94.8 | |
| TIGR01924 | 159 | rsbW_low_gc serine-protein kinase RsbW. This model | 94.75 | |
| PRK09959 | 1197 | hybrid sensory histidine kinase in two-component r | 94.59 | |
| COG0642 | 336 | BaeS Signal transduction histidine kinase [Signal | 94.52 | |
| PRK11073 | 348 | glnL nitrogen regulation protein NR(II); Provision | 94.11 | |
| PRK13557 | 540 | histidine kinase; Provisional | 92.57 | |
| KOG0787 | 414 | consensus Dehydrogenase kinase [Signal transductio | 91.3 | |
| COG3920 | 221 | Signal transduction histidine kinase [Signal trans | 91.06 | |
| COG2172 | 146 | RsbW Anti-sigma regulatory factor (Ser/Thr protein | 91.03 | |
| COG3850 | 574 | NarQ Signal transduction histidine kinase, nitrate | 90.92 | |
| COG0643 | 716 | CheA Chemotaxis protein histidine kinase and relat | 90.78 | |
| COG4251 | 750 | Bacteriophytochrome (light-regulated signal transd | 90.15 | |
| PRK13560 | 807 | hypothetical protein; Provisional | 89.26 | |
| PRK11644 | 495 | sensory histidine kinase UhpB; Provisional | 89.17 | |
| COG5000 | 712 | NtrY Signal transduction histidine kinase involved | 88.68 | |
| COG4585 | 365 | Signal transduction histidine kinase [Signal trans | 87.05 | |
| COG2205 | 890 | KdpD Osmosensitive K+ channel histidine kinase [Si | 86.33 | |
| COG4192 | 673 | Signal transduction histidine kinase regulating ph | 85.47 | |
| KOG0019 | 656 | consensus Molecular chaperone (HSP90 family) [Post | 83.16 |
| >PTZ00272 heat shock protein 83 kDa (Hsp83); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-167 Score=1431.42 Aligned_cols=672 Identities=67% Similarity=1.090 Sum_probs=594.5
Q ss_pred CCcccccchhhcHHHHHHHHHhcCCCCchHHHHHHHhcHHHHHHhhhhhhccCCCccCCCCCceEEEEEcCCCCEEEEEe
Q 005370 1 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVD 80 (699)
Q Consensus 1 m~~~e~~~F~~d~~~ll~ll~~~LYs~~~i~lRELIqNA~DA~~k~r~~~~~~~~~~~~~~~~~I~I~~d~~~~~l~I~D 80 (699)
|+ |+|+||+|+++||+||+++||||+++|||||||||+|||+++|+++++++.+.....++.|+|..|.++.+|+|+|
T Consensus 1 ~~--e~~~Fqae~~~Ll~lli~slYs~~~iflRELIsNA~DA~~k~r~~~l~~~~~~~~~~~~~I~i~~d~~~~~L~I~D 78 (701)
T PTZ00272 1 MT--ETFAFQAEINQLMSLIINTFYSNKEIFLRELISNASDACDKIRYQSLTDPSVLGESPRLCIRVVPDKENKTLTVED 78 (701)
T ss_pred CC--ceEecHHHHHHHHHHHHhcccCCccHhHHHHHhhHHHHHHHHHHHhcCCchhcCCCCceEEEEEEcCCCCEEEEEE
Confidence 55 7899999999999999999999999999999999999999999999999887766677899999998889999999
Q ss_pred CCCCCCHHHHHHHHhhhhccCchhHHHHHhcCCCCCccccccchhhheeeecCeEEEEEecCCCceEEEEEccCceEEEE
Q 005370 81 SGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVT 160 (699)
Q Consensus 81 nGiGMt~~el~~~l~~Ia~S~~~~f~~~~~~~~~~~~iG~FGIGf~S~F~vad~v~V~T~~~~~~~~~w~~~~~~~~~i~ 160 (699)
||+|||++||.++||+||+||++.|+++++.+.+..+|||||||||||||||++|+|+||+.++.++.|+|+|+|.|+|.
T Consensus 79 nGiGMt~edl~~~LgtIa~SGt~~f~~~~~~~~~~~~iGqFGvGfyS~Fmvad~V~V~Srs~~~~~~~W~s~~~g~y~i~ 158 (701)
T PTZ00272 79 NGIGMTKADLVNNLGTIARSGTKAFMEALEAGGDMSMIGQFGVGFYSAYLVADRVTVTSKNNSDESYVWESSAGGTFTIT 158 (701)
T ss_pred CCCCCCHHHHHHHhhhhhhcchHHHHHHhhccCCccccCCCCcceEEEEEeccEEEEEEecCCCceEEEEECCCCcEEEE
Confidence 99999999999999999999999999888655567899999999999999999999999987678999999999999998
Q ss_pred eCCCCCCCCCceEEEEEeccchhhcccHHHHHHHHHHhcCCCccceEeecccccccccCCCCCCCc----cccccCCccc
Q 005370 161 RDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISDDEDDEP----KKEEEGDVED 236 (699)
Q Consensus 161 ~~~~~~~~~~GT~I~L~lk~~~~~~~~~~~l~~ii~~ys~fl~~pI~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 236 (699)
+.+. ...++||+|+|||+++..+|++.++|+++|++||.|++|||+++..+....+++++++..+ ++.+.+.+++
T Consensus 159 ~~~~-~~~~~GT~I~L~Lk~d~~ef~~~~~i~~li~kYs~fi~~PI~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (701)
T PTZ00272 159 STPE-SDMKRGTRITLHLKEDQMEYLEPRRLKELIKKHSEFIGYDIELMVEKTTEKEVTDEDEEDTKKADEDGEEPKVEE 237 (701)
T ss_pred eCCC-CCCCCCCEEEEEECCchHHhccHHHHHHHHHHhccccCcceEEeeccccccccCcchhhhccccccccccccccc
Confidence 8542 3458999999999999999999999999999999999999999864433322222211000 0111111222
Q ss_pred cchHHHhhhcccccccccccceeeeccCCCCccCCCCCCCHHHHHHHHHHhhcCccCCceeeeeecccceeeEEEEEecC
Q 005370 237 VDEEKEKEGKKKKKIKEVSHEWQLINKQKPIWLRKPEEITKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAVLFVPK 316 (699)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~iN~~~piW~~~~~~v~~eey~~fyk~~~~~~~~pl~~~h~~~eg~~~~~~llyiP~ 316 (699)
.+++.+.+.+++++++++.++|++||+++|||+|+|++||+++|++|||+++++|++||+|+||++||+++|+||||||+
T Consensus 238 ~~~~~~~~~~k~~~~~~~~~~~e~iN~~~~lW~r~~~~i~~eey~~Fyk~~~~~~~~Pl~~ih~~~eg~~~~~~llyiP~ 317 (701)
T PTZ00272 238 VKEGDEGKKKKTKKVKEVTKEYEVQNKHKPLWTRDPKDVTKEEYAAFYKAISNDWEDPAATKHFSVEGQLEFRSIMFVPK 317 (701)
T ss_pred ccccccccccccccccccccchhhcccCcCCeecCcccCCHHHHHHHHHHhcCCcCCCceeeeeccCCceeeEEEEEeCC
Confidence 21111122234456666778899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcchhhhcccceEEEeeceeccccccccccccccceeeeecCCCCCCccchhhhcccHHHHHHHHHHHHHHHHHHH
Q 005370 317 RAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEYLGFIKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFN 396 (699)
Q Consensus 317 ~~p~~~~~~~~~~~~i~LY~~rv~I~d~~~~llP~~l~Fv~GvVDS~dLplnvSRE~lq~~~~l~~i~~~l~~k~~~~L~ 396 (699)
.+|+++|+.+..+++|+||||||||+|+|++|||+||+||||||||+|||||||||+||+|++|++||+.|++|++++|.
T Consensus 318 ~~~~~~~~~~~~~~~i~LY~~rVfI~d~~~~llP~~l~FvkGVVDS~DLpLNvSRE~LQ~~~~l~~i~~~i~~ki~~~l~ 397 (701)
T PTZ00272 318 RAPFDMFEPNKKRNNIKLYVRRVFIMDNCEDLCPDWLGFVKGVVDSEDLPLNISRENLQQNKILKVIRKNIVKKCLEMFD 397 (701)
T ss_pred CCccchhhhhhccCceEEEEeeEEEecchhhhhHHHHhheeEEeecCCCCCccCHHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 99999987544578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCHHHHHHHHHHHhHHhhccccCChhhHHHHhchhcccccCCCCceecHHHHHHhhcCCCceEEEEeCCCHHHHhcC
Q 005370 397 EIAENKEDYNKFYDAFSKNLKLGIHEDSQNRAKLADLLRYHSTKSSEEFTSLKDYVTRMKEGQKDIYYITGESKKAVENS 476 (699)
Q Consensus 397 ~la~d~e~y~~f~~~~~~~lK~G~~eD~~~~e~l~~lLrf~ss~~~~~~~sL~eY~~rm~~~Q~~IyY~~~~~~~~~~~s 476 (699)
++|+++++|++||++||.+||+|+++|+.|+++|++||||+||.++++++||+||++||+++|+.|||++|++++++++|
T Consensus 398 ~la~~~~~y~~f~~~~g~~lK~G~~~D~~~~~~l~~Llrf~ss~~~~~~~sL~eYv~rmk~~Q~~IYY~~~~s~~~~~~s 477 (701)
T PTZ00272 398 EVAENKEDYKQFYEQFGKNIKLGIHEDTANRKKLMELLRFYSTESGEEMTTLKDYVTRMKAGQKSIYYITGDSKKKLETS 477 (701)
T ss_pred HHhhCHHHHHHHHHHHhhhhheeeccCHhHHHHHHHhhceeecCCCCceeeHHHHHHhhccCCceEEEEeCCCHHHHHhC
Confidence 99999999999999999999999999999999999999999998667899999999999999999999999999999999
Q ss_pred hhhHHHHHcCCEEEEecCCchHHHHHHHhhccCceeEeccccCCCCCcchHHHHhhHHHhHHhHHHHHHHHHHHhCCccc
Q 005370 477 PFLERLKKKGYEVLYMVDAIDEYAVGQLKEYEGKKLVSATKEGLKLDDETEEEKKKKEEKKKSFENLCKTMKDILGDRVE 556 (699)
Q Consensus 477 p~lE~~~~kG~eVL~l~dpiDE~~l~~L~~~~~~~f~~V~~~~~~l~~~~~~~~~~~~~~~~e~~~L~~~~k~~L~~~V~ 556 (699)
||+|+|+++|||||||+||||||||++|++|+|++|++|++++++++. .++++...+..++++++|++|+|++|+++|.
T Consensus 478 P~lE~~~~kg~EVL~l~dpiDe~~i~~l~ey~~k~f~sV~~~~~~l~~-~~~e~~~~~~~~~~~~~L~~~~k~~L~~kV~ 556 (701)
T PTZ00272 478 PFIEQARRRGLEVLFMTEPIDEYVMQQVKDFEDKKFACLTKEGVHFEE-SEEEKQQREEEKAACEKLCKTMKEVLGDKVE 556 (701)
T ss_pred hHHHHHHhCCCeEEEeCCcHHHHHHHHHHhcCCCceEecccccccccc-cccchhhhhhhHHHHHHHHHHHHHHhCCccc
Confidence 999999999999999999999999999999999999999999988764 2222222223445799999999999999999
Q ss_pred EEEEeecCCCCCEEEEeCCCCccHHHHHHHHHHhcccCccccccCCCceEEeCCCChHHHHHHHhhhccCCchhHHHHHH
Q 005370 557 KVVVSDRIVDSPCCLVTGEYGWSANMERIMKAQALRDNSMSSYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLTM 636 (699)
Q Consensus 557 ~V~vs~rL~dsP~~lv~~e~g~s~~mer~mka~~~~~~~~~~~~~~k~~LeiNp~HplIk~L~~~~~~~~~~~~~~~~~~ 636 (699)
+|++|+||++||||||++++|+|++|+|||++|++++..+..++.++++|||||+||||++|+++...+.+++.++++|+
T Consensus 557 ~VkvS~RL~~sPa~lv~~e~g~s~~Merimkaq~~~~~~~~~~~~~kkiLEINP~HpiIk~L~~~~~~~~~~~~~~~la~ 636 (701)
T PTZ00272 557 KVIVSERLSTSPCILVTSEFGWSAHMEQIMRNQALRDSSMAQYMMSKKTMELNPRHPIIKELRRRVGADENDKAVKDLVF 636 (701)
T ss_pred EEEEeccCCCCCeEEEecccchhHHHHHHHHhcccccccccccccCCeEEEECCCCHHHHHHHHHhhcccchHHHHHHHH
Confidence 99999999999999999999999999999999875432233345688999999999999999886545555667999999
Q ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCccccc
Q 005370 637 LLFETALLTSGFSLDDPNTFGSRIHRMLKLGLSIDEEENA 676 (699)
Q Consensus 637 ~Lyd~AlL~~G~~l~d~~~f~~r~~~ll~~~l~~~~~~~~ 676 (699)
||||+|||++|++++||+.|++|+|+||..+|+++.+++.
T Consensus 637 ~LyD~AlL~~G~~leDp~~f~~Ri~~lL~~~l~~~~~~~~ 676 (701)
T PTZ00272 637 LLFDTSLLTSGFQLEDPTGYAERINRMIKLGLSLDEEEEE 676 (701)
T ss_pred HHHHHHHHhCCCCccCHHHHHHHHHHHHHHhcCCCccccc
Confidence 9999999999999999999999999999879999977543
|
|
| >PTZ00130 heat shock protein 90; Provisional | Back alignment and domain information |
|---|
| >KOG0020 consensus Endoplasmic reticulum glucose-regulated protein (GRP94/endoplasmin), HSP90 family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG0326 HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0019 consensus Molecular chaperone (HSP90 family) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK05218 heat shock protein 90; Provisional | Back alignment and domain information |
|---|
| >PRK14083 HSP90 family protein; Provisional | Back alignment and domain information |
|---|
| >PF00183 HSP90: Hsp90 protein; InterPro: IPR001404 Molecular chaperones, or heat shock proteins (Hsps) are ubiquitous proteins that act to maintain proper protein folding within the cell [] | Back alignment and domain information |
|---|
| >PF13589 HATPase_c_3: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PDB: 3IED_A 2XCM_B 2JKI_B 3OPD_A 2O1V_B 2GQP_A 2O1W_C 1YT2_A 1TC6_A 2H8M_B | Back alignment and domain information |
|---|
| >TIGR00585 mutl DNA mismatch repair protein MutL | Back alignment and domain information |
|---|
| >PRK00095 mutL DNA mismatch repair protein; Reviewed | Back alignment and domain information |
|---|
| >COG1389 DNA topoisomerase VI, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >COG0323 MutL DNA mismatch repair enzyme (predicted ATPase) [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PRK04184 DNA topoisomerase VI subunit B; Validated | Back alignment and domain information |
|---|
| >TIGR01052 top6b DNA topoisomerase VI, B subunit | Back alignment and domain information |
|---|
| >PRK14868 DNA topoisomerase VI subunit B; Provisional | Back alignment and domain information |
|---|
| >PRK14867 DNA topoisomerase VI subunit B; Provisional | Back alignment and domain information |
|---|
| >TIGR01055 parE_Gneg DNA topoisomerase IV, B subunit, proteobacterial | Back alignment and domain information |
|---|
| >PRK05559 DNA topoisomerase IV subunit B; Reviewed | Back alignment and domain information |
|---|
| >PF02518 HATPase_c: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; InterPro: IPR003594 This domain is found in several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases [], heat shock protein HSP90 [, , ], phytochrome-like ATPases and DNA mismatch repair proteins | Back alignment and domain information |
|---|
| >smart00433 TOP2c TopoisomeraseII | Back alignment and domain information |
|---|
| >PRK05644 gyrB DNA gyrase subunit B; Validated | Back alignment and domain information |
|---|
| >TIGR01059 gyrB DNA gyrase, B subunit | Back alignment and domain information |
|---|
| >KOG1979 consensus DNA mismatch repair protein - MLH1 family [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PRK14939 gyrB DNA gyrase subunit B; Provisional | Back alignment and domain information |
|---|
| >KOG1978 consensus DNA mismatch repair protein - MLH2/PMS1/Pms2 family [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >KOG1977 consensus DNA mismatch repair protein - MLH3 family [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >TIGR01058 parE_Gpos DNA topoisomerase IV, B subunit, Gram-positive | Back alignment and domain information |
|---|
| >PRK10755 sensor protein BasS/PmrB; Provisional | Back alignment and domain information |
|---|
| >cd00075 HATPase_c Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins | Back alignment and domain information |
|---|
| >TIGR02916 PEP_his_kin putative PEP-CTERM system histidine kinase | Back alignment and domain information |
|---|
| >PRK10604 sensor protein RstB; Provisional | Back alignment and domain information |
|---|
| >PRK10549 signal transduction histidine-protein kinase BaeS; Provisional | Back alignment and domain information |
|---|
| >PRK11100 sensory histidine kinase CreC; Provisional | Back alignment and domain information |
|---|
| >smart00387 HATPase_c Histidine kinase-like ATPases | Back alignment and domain information |
|---|
| >TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL | Back alignment and domain information |
|---|
| >PRK11086 sensory histidine kinase DcuS; Provisional | Back alignment and domain information |
|---|
| >TIGR01386 cztS_silS_copS heavy metal sensor kinase | Back alignment and domain information |
|---|
| >PRK10364 sensor protein ZraS; Provisional | Back alignment and domain information |
|---|
| >COG0187 GyrB Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PLN03237 DNA topoisomerase 2; Provisional | Back alignment and domain information |
|---|
| >PRK10815 sensor protein PhoQ; Provisional | Back alignment and domain information |
|---|
| >PRK15053 dpiB sensor histidine kinase DpiB; Provisional | Back alignment and domain information |
|---|
| >PRK15347 two component system sensor kinase SsrA; Provisional | Back alignment and domain information |
|---|
| >PRK11006 phoR phosphate regulon sensor protein; Provisional | Back alignment and domain information |
|---|
| >PRK11466 hybrid sensory histidine kinase TorS; Provisional | Back alignment and domain information |
|---|
| >PTZ00108 DNA topoisomerase 2-like protein; Provisional | Back alignment and domain information |
|---|
| >PLN03128 DNA topoisomerase 2; Provisional | Back alignment and domain information |
|---|
| >PRK09470 cpxA two-component sensor protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02956 TMAO_torS TMAO reductase sytem sensor TorS | Back alignment and domain information |
|---|
| >PRK11360 sensory histidine kinase AtoS; Provisional | Back alignment and domain information |
|---|
| >PRK09467 envZ osmolarity sensor protein; Provisional | Back alignment and domain information |
|---|
| >PHA02569 39 DNA topoisomerase II large subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR03785 marine_sort_HK proteobacterial dedicated sortase system histidine kinase | Back alignment and domain information |
|---|
| >PRK09303 adaptive-response sensory kinase; Validated | Back alignment and domain information |
|---|
| >COG3290 CitA Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR | Back alignment and domain information |
|---|
| >PTZ00109 DNA gyrase subunit b; Provisional | Back alignment and domain information |
|---|
| >TIGR01925 spIIAB anti-sigma F factor | Back alignment and domain information |
|---|
| >PRK10337 sensor protein QseC; Provisional | Back alignment and domain information |
|---|
| >PRK09835 sensor kinase CusS; Provisional | Back alignment and domain information |
|---|
| >PRK10618 phosphotransfer intermediate protein in two-component regulatory system with RcsBC; Provisional | Back alignment and domain information |
|---|
| >PRK03660 anti-sigma F factor; Provisional | Back alignment and domain information |
|---|
| >PRK11091 aerobic respiration control sensor protein ArcB; Provisional | Back alignment and domain information |
|---|
| >PRK04069 serine-protein kinase RsbW; Provisional | Back alignment and domain information |
|---|
| >PRK13837 two-component VirA-like sensor kinase; Provisional | Back alignment and domain information |
|---|
| >PRK10490 sensor protein KdpD; Provisional | Back alignment and domain information |
|---|
| >COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK11107 hybrid sensory histidine kinase BarA; Provisional | Back alignment and domain information |
|---|
| >PF13581 HATPase_c_2: Histidine kinase-like ATPase domain | Back alignment and domain information |
|---|
| >PRK10547 chemotaxis protein CheA; Provisional | Back alignment and domain information |
|---|
| >PRK10600 nitrate/nitrite sensor protein NarX; Provisional | Back alignment and domain information |
|---|
| >PRK10841 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; Provisional | Back alignment and domain information |
|---|
| >TIGR01924 rsbW_low_gc serine-protein kinase RsbW | Back alignment and domain information |
|---|
| >PRK09959 hybrid sensory histidine kinase in two-component regulatory system with EvgA; Provisional | Back alignment and domain information |
|---|
| >COG0642 BaeS Signal transduction histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK11073 glnL nitrogen regulation protein NR(II); Provisional | Back alignment and domain information |
|---|
| >PRK13557 histidine kinase; Provisional | Back alignment and domain information |
|---|
| >KOG0787 consensus Dehydrogenase kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG3920 Signal transduction histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG2172 RsbW Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG3850 NarQ Signal transduction histidine kinase, nitrate/nitrite-specific [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG0643 CheA Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK13560 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK11644 sensory histidine kinase UhpB; Provisional | Back alignment and domain information |
|---|
| >COG5000 NtrY Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG4585 Signal transduction histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG4192 Signal transduction histidine kinase regulating phosphoglycerate transport system [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0019 consensus Molecular chaperone (HSP90 family) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 699 | ||||
| 2o1u_A | 666 | Structure Of Full Length Grp94 With Amp-Pnp Bound L | 1e-174 | ||
| 3q6m_A | 448 | Crystal Structure Of Human Mc-Hsp90 In C2221 Space | 1e-169 | ||
| 3hjc_A | 444 | Crystal Structure Of The Carboxy-Terminal Domain Of | 1e-154 | ||
| 2cg9_A | 677 | Crystal Structure Of An Hsp90-Sba1 Closed Chaperone | 1e-153 | ||
| 2cge_A | 405 | Crystal Structure Of An Hsp90-Sba1 Closed Chaperone | 1e-151 | ||
| 2o1w_A | 506 | Structure Of N-Terminal Plus Middle Domains (N+m) O | 1e-141 | ||
| 2iop_A | 624 | Crystal Structure Of Full-Length Htpg, The Escheric | 1e-124 | ||
| 1y4s_A | 559 | Conformation Rearrangement Of Heat Shock Protein 90 | 1e-118 | ||
| 2jki_A | 223 | Complex Of Hsp90 N-terminal And Sgt1 Cs Domain Leng | 1e-112 | ||
| 2xcm_A | 214 | Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord | 1e-111 | ||
| 3pry_A | 268 | Crystal Structure Of The Middle Domain Of Human Hsp | 1e-111 | ||
| 1hk7_A | 288 | Middle Domain Of Hsp90 Length = 288 | 1e-110 | ||
| 1usv_A | 260 | The Structure Of The Complex Between Aha1 And Hsp90 | 1e-109 | ||
| 1usu_A | 260 | The Structure Of The Complex Between Aha1 And Hsp90 | 1e-108 | ||
| 2o1t_A | 450 | Structure Of Middle Plus C-Terminal Domains (M+c) O | 1e-106 | ||
| 3inw_A | 228 | Hsp90 N-Terminal Domain With Pochoxime A Length = 2 | 5e-95 | ||
| 1uy6_A | 236 | Human Hsp90-Alpha With 9-Butyl-8-(3,4,5-Trimethoxy- | 5e-95 | ||
| 2ye2_A | 252 | Hsp90 Inhibitors And Drugs From Fragment And Virtua | 6e-95 | ||
| 2bsm_A | 235 | Novel, Potent Small Molecule Inhibitors Of The Mole | 6e-95 | ||
| 3d0b_A | 232 | Crystal Structure Of Benzamide Tetrahydro-4h-Carbaz | 6e-95 | ||
| 3qdd_A | 237 | Hsp90a N-Terminal Domain In Complex With Biib021 Le | 6e-95 | ||
| 2ye7_A | 252 | Hsp90 Inhibitors And Drugs From Fragment And Virtua | 6e-95 | ||
| 3b24_A | 229 | Hsp90 Alpha N-Terminal Domain In Complex With An Am | 6e-95 | ||
| 4egh_A | 232 | Hsp90-Alpha Atpase Domain In Complex With (4-Hydrox | 7e-95 | ||
| 3r4m_A | 228 | Optimization Of Potent, Selective, And Orally Bioav | 7e-95 | ||
| 4awo_A | 230 | Complex Of Hsp90 Atpase Domain With Tropane Derived | 7e-95 | ||
| 1uyi_A | 236 | Human Hsp90-Alpha With 8-(2,5-Dimethoxy-Benzyl)-2-F | 7e-95 | ||
| 3hhu_A | 224 | Human Heat-Shock Protein 90 (Hsp90) In Complex With | 7e-95 | ||
| 2fwy_A | 256 | Structure Of Human Hsp90-Alpha Bound To The Potent | 7e-95 | ||
| 4eeh_A | 229 | Hsp90 Alpha N-Terminal Domain In Complex With An In | 7e-95 | ||
| 3bm9_A | 226 | Discovery Of Benzisoxazoles As Potent Inhibitors Of | 7e-95 | ||
| 2yi0_A | 229 | Structural Characterization Of 5-Aryl-4-(5-Substitu | 8e-95 | ||
| 3k98_A | 232 | Hsp90 N-Terminal Domain In Complex With (1r)-2-(5-C | 8e-95 | ||
| 3eko_A | 226 | Dihydroxylphenyl Amides As Inhibitors Of The Hsp90 | 8e-95 | ||
| 1osf_A | 215 | Human Hsp90 In Complex With 17-desmethoxy-17-n,n- D | 9e-95 | ||
| 2jjc_A | 218 | Hsp90 Alpha Atpase Domain With Bound Small Molecule | 9e-95 | ||
| 3tuh_A | 209 | Crystal Structure Of The N-Terminal Domain Of An Hs | 9e-95 | ||
| 3ft5_A | 249 | Structure Of Hsp90 Bound With A Novel Fragment Leng | 9e-95 | ||
| 3k97_A | 251 | Hsp90 N-Terminal Domain In Complex With 4-Chloro-6- | 1e-94 | ||
| 2xdu_A | 236 | Structre Of Hsp90 With Small Molecule Inhibitor Bou | 1e-94 | ||
| 2ccs_A | 236 | Human Hsp90 With 4-Chloro-6-(4-Piperazin-1-Yl-1h-Py | 1e-94 | ||
| 2yjw_A | 209 | Tricyclic Series Of Hsp90 Inhibitors Length = 209 | 1e-94 | ||
| 2qfo_A | 207 | Hsp90 Complexed With A143571 And A516383 Length = 2 | 1e-94 | ||
| 1byq_A | 228 | Hsp90 N-Terminal Domain Bound To Adp-Mg Length = 22 | 2e-94 | ||
| 2k5b_A | 210 | Human Cdc37-Hsp90 Docking Model Based On Nmr Length | 2e-94 | ||
| 2xjg_A | 249 | Structure Of Hsp90 With Small Molecule Inhibitor Bo | 2e-94 | ||
| 1yc1_A | 264 | Crystal Structures Of Human Hsp90alpha Complexed Wi | 2e-94 | ||
| 2qf6_A | 207 | Hsp90 Complexed With A56322 Length = 207 | 2e-94 | ||
| 3k60_A | 223 | Crystal Structure Of N-Terminal Domain Of Plasmodiu | 3e-94 | ||
| 2yee_A | 252 | Hsp90 Inhibitors And Drugs From Fragment And Virtua | 4e-94 | ||
| 2xjj_A | 249 | Structre Of Hsp90 With Small Molecule Inhibitor Bou | 6e-94 | ||
| 1uym_A | 220 | Human Hsp90-Beta With Pu3 (9-Butyl-8(3,4,5-Trimetho | 3e-92 | ||
| 3nmq_A | 239 | Hsp90b N-Terminal Domain In Complex With Ec44, A Py | 4e-92 | ||
| 3h80_A | 231 | Crystal Structure Of The Amino-Terminal Domain Of H | 6e-87 | ||
| 3o6o_A | 214 | Crystal Structure Of The N-Terminal Domain Of An Hs | 1e-86 | ||
| 3opd_A | 231 | Crystal Structure Of The N-Terminal Domain Of An Hs | 1e-86 | ||
| 2cgf_A | 225 | A Radicicol Analogue Bound To The Atp Binding Site | 4e-85 | ||
| 2bre_A | 219 | Structure Of A Hsp90 Inhibitor Bound To The N-Termi | 6e-85 | ||
| 1us7_A | 214 | Complex Of Hsp90 And P50 Length = 214 | 7e-85 | ||
| 1a4h_A | 230 | Structure Of The N-Terminal Domain Of The Yeast Hsp | 7e-85 | ||
| 1ah8_A | 220 | Structure Of The Orthorhombic Form Of The N-Termina | 7e-85 | ||
| 2xx2_A | 214 | Macrolactone Inhibitor Bound To Hsp90 N-Term Length | 8e-85 | ||
| 1am1_A | 213 | Atp Binding Site In The Hsp90 Molecular Chaperone L | 8e-85 | ||
| 1bgq_A | 225 | Radicicol Bound To The Atp Binding Site Of The N-Te | 8e-85 | ||
| 1zw9_A | 240 | Yeast Hsp82 In Complex With The Novel Hsp90 Inhibit | 1e-84 | ||
| 4gqt_A | 227 | N-Terminal Domain Of C. Elegans Hsp90 Length = 227 | 1e-84 | ||
| 2wep_A | 220 | Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Adp | 2e-84 | ||
| 2yge_A | 220 | E88g-n92l Mutant Of N-term Hsp90 Complexed With Gel | 3e-84 | ||
| 3c0e_A | 240 | Yeast Hsp82 N-Terminal Domain: Effects Of Mutants 9 | 6e-84 | ||
| 2ygf_A | 220 | L89v, L93i And V136m Mutant Of N-term Hsp90 Complex | 7e-84 | ||
| 2yga_A | 220 | E88g-n92l Mutant Of N-term Hsp90 Complexed With Gel | 2e-83 | ||
| 2akp_A | 186 | Hsp90 Delta24-n210 Mutant Length = 186 | 3e-74 | ||
| 1u0y_A | 273 | N-Domain Of Grp94, With The Charged Domain, In Comp | 2e-65 | ||
| 1qy5_A | 269 | Crystal Structure Of The N-Domain Of The Er Hsp90 C | 2e-65 | ||
| 1u2o_A | 236 | Crystal Structure Of The N-Domain Of Grp94 Lacking | 3e-65 | ||
| 3peh_A | 281 | Crystal Structure Of The N-Terminal Domain Of An Hs | 4e-65 | ||
| 2esa_A | 236 | Grp94 N-Terminal Domain Bound To Geldanamycin: Effe | 2e-64 | ||
| 2gq0_A | 303 | Crystal Structure Of The Middle Domain Of Htpg, The | 2e-60 | ||
| 1y6z_A | 263 | Middle Domain Of Plasmodium Falciparum Putative Hea | 2e-54 | ||
| 2ior_A | 235 | Crystal Structure Of The N-Terminal Domain Of Htpg, | 5e-50 | ||
| 3ied_A | 272 | Crystal Structure Of N-Terminal Domain Of Plasmodiu | 1e-46 | ||
| 1sf8_A | 126 | Crystal Structure Of The Carboxy-terminal Domain Of | 2e-04 |
| >pdb|2O1U|A Chain A, Structure Of Full Length Grp94 With Amp-Pnp Bound Length = 666 | Back alignment and structure |
|
| >pdb|3Q6M|A Chain A, Crystal Structure Of Human Mc-Hsp90 In C2221 Space Group Length = 448 | Back alignment and structure |
| >pdb|3HJC|A Chain A, Crystal Structure Of The Carboxy-Terminal Domain Of Hsp90 From Leishmania Major, Lmjf33.0312 Length = 444 | Back alignment and structure |
| >pdb|2CG9|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 677 | Back alignment and structure |
| >pdb|2CGE|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 405 | Back alignment and structure |
| >pdb|2O1W|A Chain A, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94 Length = 506 | Back alignment and structure |
| >pdb|2IOP|A Chain A, Crystal Structure Of Full-Length Htpg, The Escherichia Coli Hsp90, Bound To Adp Length = 624 | Back alignment and structure |
| >pdb|1Y4S|A Chain A, Conformation Rearrangement Of Heat Shock Protein 90 Upon Adp Binding Length = 559 | Back alignment and structure |
| >pdb|2JKI|A Chain A, Complex Of Hsp90 N-terminal And Sgt1 Cs Domain Length = 223 | Back alignment and structure |
| >pdb|2XCM|A Chain A, Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord2 Domain Length = 214 | Back alignment and structure |
| >pdb|3PRY|A Chain A, Crystal Structure Of The Middle Domain Of Human Hsp90-Beta Refined At 2.3 A Resolution Length = 268 | Back alignment and structure |
| >pdb|1HK7|A Chain A, Middle Domain Of Hsp90 Length = 288 | Back alignment and structure |
| >pdb|1USV|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90 Length = 260 | Back alignment and structure |
| >pdb|1USU|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90 Length = 260 | Back alignment and structure |
| >pdb|2O1T|A Chain A, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94 Length = 450 | Back alignment and structure |
| >pdb|3INW|A Chain A, Hsp90 N-Terminal Domain With Pochoxime A Length = 228 | Back alignment and structure |
| >pdb|1UY6|A Chain A, Human Hsp90-Alpha With 9-Butyl-8-(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine Length = 236 | Back alignment and structure |
| >pdb|2YE2|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252 | Back alignment and structure |
| >pdb|2BSM|A Chain A, Novel, Potent Small Molecule Inhibitors Of The Molecular Chaperone Hsp90 Discovered Through Structure-Based Design Length = 235 | Back alignment and structure |
| >pdb|3D0B|A Chain A, Crystal Structure Of Benzamide Tetrahydro-4h-Carbazol-4-One Bound To Hsp90 Length = 232 | Back alignment and structure |
| >pdb|3QDD|A Chain A, Hsp90a N-Terminal Domain In Complex With Biib021 Length = 237 | Back alignment and structure |
| >pdb|2YE7|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252 | Back alignment and structure |
| >pdb|3B24|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Aminotriazine Fragment Molecule Length = 229 | Back alignment and structure |
| >pdb|4EGH|A Chain A, Hsp90-Alpha Atpase Domain In Complex With (4-Hydroxyphenyl)morpholin- 4-Yl Methanone Length = 232 | Back alignment and structure |
| >pdb|3R4M|A Chain A, Optimization Of Potent, Selective, And Orally Bioavailable Pyrrolodinopyrimidine-Containing Inhibitors Of Heat Shock Protein 90. Identification Of Development Candidate 2-Amino-4-{4-Chloro-2-[2-(4- Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2- Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3, 4-D]pyrimidine-6-Carboxamide Length = 228 | Back alignment and structure |
| >pdb|4AWO|A Chain A, Complex Of Hsp90 Atpase Domain With Tropane Derived Inhibitors Length = 230 | Back alignment and structure |
| >pdb|1UYI|A Chain A, Human Hsp90-Alpha With 8-(2,5-Dimethoxy-Benzyl)-2-Fluoro-9- Pent-9h-Purin-6-Ylamine Length = 236 | Back alignment and structure |
| >pdb|3HHU|A Chain A, Human Heat-Shock Protein 90 (Hsp90) In Complex With {4-[3- (2,4-Dihydroxy-5-Isopropyl-Phenyl)-5-Thioxo- 1,5-Dihydro- [1,2,4]triazol-4-Yl]-Benzyl}-Carbamic Acid Ethyl Ester {zk 2819} Length = 224 | Back alignment and structure |
| >pdb|2FWY|A Chain A, Structure Of Human Hsp90-Alpha Bound To The Potent Water Soluble Inhibitor Pu-H64 Length = 256 | Back alignment and structure |
| >pdb|4EEH|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor 3-(4- Hydroxy-Phenyl)-1h-Indazol-6-Ol Length = 229 | Back alignment and structure |
| >pdb|3BM9|A Chain A, Discovery Of Benzisoxazoles As Potent Inhibitors Of Chaperone Hsp90 Length = 226 | Back alignment and structure |
| >pdb|2YI0|A Chain A, Structural Characterization Of 5-Aryl-4-(5-Substituted-2-4- Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors. Length = 229 | Back alignment and structure |
| >pdb|3K98|A Chain A, Hsp90 N-Terminal Domain In Complex With (1r)-2-(5-Chloro-2, 4-Dihydroxybenzoyl)-N-Ethylisoindoline-1-Carboxamide Length = 232 | Back alignment and structure |
| >pdb|3EKO|A Chain A, Dihydroxylphenyl Amides As Inhibitors Of The Hsp90 Molecular Chaperone Length = 226 | Back alignment and structure |
| >pdb|1OSF|A Chain A, Human Hsp90 In Complex With 17-desmethoxy-17-n,n- Dimethylaminoethylamino-geldanamycin Length = 215 | Back alignment and structure |
| >pdb|2JJC|A Chain A, Hsp90 Alpha Atpase Domain With Bound Small Molecule Fragment Length = 218 | Back alignment and structure |
| >pdb|3TUH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 In The Presence Of An The Inhibitor Ganetespib Length = 209 | Back alignment and structure |
| >pdb|3FT5|A Chain A, Structure Of Hsp90 Bound With A Novel Fragment Length = 249 | Back alignment and structure |
| >pdb|3K97|A Chain A, Hsp90 N-Terminal Domain In Complex With 4-Chloro-6-{[(2r)-2- (2-Methylphenyl)pyrrolidin-1-Yl]carbonyl}benzene-1, 3-Diol Length = 251 | Back alignment and structure |
| >pdb|2XDU|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound Length = 236 | Back alignment and structure |
| >pdb|2CCS|A Chain A, Human Hsp90 With 4-Chloro-6-(4-Piperazin-1-Yl-1h-Pyrazol-3- Yl)-Benzene-1,2-Diol Length = 236 | Back alignment and structure |
| >pdb|2YJW|A Chain A, Tricyclic Series Of Hsp90 Inhibitors Length = 209 | Back alignment and structure |
| >pdb|2QFO|A Chain A, Hsp90 Complexed With A143571 And A516383 Length = 207 | Back alignment and structure |
| >pdb|1BYQ|A Chain A, Hsp90 N-Terminal Domain Bound To Adp-Mg Length = 228 | Back alignment and structure |
| >pdb|2K5B|A Chain A, Human Cdc37-Hsp90 Docking Model Based On Nmr Length = 210 | Back alignment and structure |
| >pdb|2XJG|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound Length = 249 | Back alignment and structure |
| >pdb|1YC1|A Chain A, Crystal Structures Of Human Hsp90alpha Complexed With Dihydroxyphenylpyrazoles Length = 264 | Back alignment and structure |
| >pdb|2QF6|A Chain A, Hsp90 Complexed With A56322 Length = 207 | Back alignment and structure |
| >pdb|3K60|A Chain A, Crystal Structure Of N-Terminal Domain Of Plasmodium Falciparum Hsp90 (Pf07_0029) Bound To Adp Length = 223 | Back alignment and structure |
| >pdb|2YEE|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252 | Back alignment and structure |
| >pdb|2XJJ|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound Length = 249 | Back alignment and structure |
| >pdb|1UYM|A Chain A, Human Hsp90-Beta With Pu3 (9-Butyl-8(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine) Length = 220 | Back alignment and structure |
| >pdb|3NMQ|A Chain A, Hsp90b N-Terminal Domain In Complex With Ec44, A Pyrrolo-Pyrimidine Methoxypyridine Inhibitor Length = 239 | Back alignment and structure |
| >pdb|3H80|A Chain A, Crystal Structure Of The Amino-Terminal Domain Of Hsp90 From Leishmania Major, Lmjf33.0312:m1-K213 Length = 231 | Back alignment and structure |
| >pdb|3O6O|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of An The Inhibitor Biib021 Length = 214 | Back alignment and structure |
| >pdb|3OPD|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of A Benzamide Derivative Length = 231 | Back alignment and structure |
| >pdb|2CGF|A Chain A, A Radicicol Analogue Bound To The Atp Binding Site Of The N- Terminal Domain Of The Yeast Hsp90 Chaperone Length = 225 | Back alignment and structure |
| >pdb|2BRE|A Chain A, Structure Of A Hsp90 Inhibitor Bound To The N-Terminus Of Yeast Hsp90. Length = 219 | Back alignment and structure |
| >pdb|1US7|A Chain A, Complex Of Hsp90 And P50 Length = 214 | Back alignment and structure |
| >pdb|1A4H|A Chain A, Structure Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone In Complex With Geldanamycin Length = 230 | Back alignment and structure |
| >pdb|1AH8|A Chain A, Structure Of The Orthorhombic Form Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone Length = 220 | Back alignment and structure |
| >pdb|2XX2|A Chain A, Macrolactone Inhibitor Bound To Hsp90 N-Term Length = 214 | Back alignment and structure |
| >pdb|1AM1|A Chain A, Atp Binding Site In The Hsp90 Molecular Chaperone Length = 213 | Back alignment and structure |
| >pdb|1BGQ|A Chain A, Radicicol Bound To The Atp Binding Site Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone Length = 225 | Back alignment and structure |
| >pdb|1ZW9|A Chain A, Yeast Hsp82 In Complex With The Novel Hsp90 Inhibitor 8-(6-Bromo- Benzo[1, 3]dioxol-5-Ylsulfanyl)-9-(3-Isopropylamino-Propyl)- Adenine Length = 240 | Back alignment and structure |
| >pdb|4GQT|A Chain A, N-Terminal Domain Of C. Elegans Hsp90 Length = 227 | Back alignment and structure |
| >pdb|2WEP|A Chain A, Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Adp Length = 220 | Back alignment and structure |
| >pdb|2YGE|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220 | Back alignment and structure |
| >pdb|3C0E|A Chain A, Yeast Hsp82 N-Terminal Domain: Effects Of Mutants 98-99 Ks- Aa Length = 240 | Back alignment and structure |
| >pdb|2YGF|A Chain A, L89v, L93i And V136m Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220 | Back alignment and structure |
| >pdb|2YGA|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220 | Back alignment and structure |
| >pdb|2AKP|A Chain A, Hsp90 Delta24-n210 Mutant Length = 186 | Back alignment and structure |
| >pdb|1U0Y|A Chain A, N-Domain Of Grp94, With The Charged Domain, In Complex With The Novel Ligand N-Propyl Carboxyamido Adenosine Length = 273 | Back alignment and structure |
| >pdb|1QY5|A Chain A, Crystal Structure Of The N-Domain Of The Er Hsp90 Chaperone Grp94 In Complex With The Specific Ligand Neca Length = 269 | Back alignment and structure |
| >pdb|1U2O|A Chain A, Crystal Structure Of The N-Domain Of Grp94 Lacking The Charged Domain In Complex With Neca Length = 236 | Back alignment and structure |
| >pdb|3PEH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Plasmodium Falciparum, Pfl1070c In The Presence Of A Thienopyrimidine Derivative Length = 281 | Back alignment and structure |
| >pdb|2ESA|A Chain A, Grp94 N-Terminal Domain Bound To Geldanamycin: Effects Of Mutants 168- 169 Ks-Aa Length = 236 | Back alignment and structure |
| >pdb|2GQ0|A Chain A, Crystal Structure Of The Middle Domain Of Htpg, The E. Coli Hsp90 Length = 303 | Back alignment and structure |
| >pdb|1Y6Z|A Chain A, Middle Domain Of Plasmodium Falciparum Putative Heat Shock Protein Pf14_0417 Length = 263 | Back alignment and structure |
| >pdb|2IOR|A Chain A, Crystal Structure Of The N-Terminal Domain Of Htpg, The Escherichia Coli Hsp90, Bound To Adp Length = 235 | Back alignment and structure |
| >pdb|3IED|A Chain A, Crystal Structure Of N-Terminal Domain Of Plasmodium Falciparum Hsp90 (Pf14_0417) In Complex With Amppn Length = 272 | Back alignment and structure |
| >pdb|1SF8|A Chain A, Crystal Structure Of The Carboxy-terminal Domain Of Htpg, The E. Coli Hsp90 Length = 126 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Length = 677 | Back alignment and structure |
|---|
Score = 1033 bits (2674), Expect = 0.0
Identities = 443/677 (65%), Positives = 550/677 (81%), Gaps = 13/677 (1%)
Query: 4 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPEL 63
+ETF FQAEI QL+SLIINT YSNKEIFLRELISN+SDALDKIR++SL+D +L+ +P+L
Sbjct: 3 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDL 62
Query: 64 FIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGV 123
FIRI P K L I DSGIGMTKA+L+NNLGTIA+SGTK FMEAL AGADVSMIGQFGV
Sbjct: 63 FIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGV 122
Query: 124 GFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQL 183
GFYS +LVA+RV V +K NDDEQYIWES AGGSFTVT D E +GRGT + L+LK+DQL
Sbjct: 123 GFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQL 182
Query: 184 EYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISDDEDDEPKKEEEGD---------- 233
EYLEE+RIK+++K+HSEF++YPI L K EKE+ E+++ +E++ +
Sbjct: 183 EYLEEKRIKEVIKRHSEFVAYPIQLVVTKEVEKEVPIPEEEKKDEEKKDEEKKDEDDKKP 242
Query: 234 VEDVDEEKEKEGKKKKKIKEVSHEWQLINKQKPIWLRKPEEITKEEYASFYKSLTNDWED 293
+ +E+E++ K KK+KE E + +NK KP+W R P +IT+EEY +FYKS++NDWED
Sbjct: 243 KLEEVDEEEEKKPKTKKVKEEVQEIEELNKTKPLWTRNPSDITQEEYNAFYKSISNDWED 302
Query: 294 HLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEYL 353
L VKHFSVEGQLEF+A+LF+PKRAPFDLF+++KK NNIKLYVRRVFI D E+LIPE+L
Sbjct: 303 PLYVKHFSVEGQLEFRAILFIPKRAPFDLFESKKKKNNIKLYVRRVFITDEAEDLIPEWL 362
Query: 354 GFIKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYNKFYDAFS 413
F+KGVVDS+DLPLN+SREMLQQNKI+KVIRKN+VKK IE FNEIAE+ E + KFY AFS
Sbjct: 363 SFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIEAFNEIAEDSEQFEKFYSAFS 422
Query: 414 KNLKLGIHEDSQNRAKLADLLRYHSTKSSEEFTSLKDYVTRMKEGQKDIYYITGESKKAV 473
KN+KLG+HED+QNRA LA LLRY+STKS +E TSL DYVTRM E QK+IYYITGES KAV
Sbjct: 423 KNIKLGVHEDTQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYYITGESLKAV 482
Query: 474 ENSPFLERLKKKGYEVLYMVDAIDEYAVGQLKEYEGKKLVSATKEGLKLDDETEEEKKKK 533
E SPFL+ LK K +EVL++ D IDEYA QLKE+EGK LV TK+ +ET+EEK ++
Sbjct: 483 EKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGKTLVDITKDF--ELEETDEEKAER 540
Query: 534 EEKKKSFENLCKTMKDILGDRVEKVVVSDRIVDSPCCLVTGEYGWSANMERIMKAQALRD 593
E++ K +E L K +K+ILGD+VEKVVVS +++D+P + TG++GWSANMERIMKAQALRD
Sbjct: 541 EKEIKEYEPLTKALKEILGDQVEKVVVSYKLLDAPAAIRTGQFGWSANMERIMKAQALRD 600
Query: 594 NSMSSYMSSKKTMEINPDNGIMEELRKRA-EADKNDKSVKDLTMLLFETALLTSGFSLDD 652
+SMSSYMSSKKT EI+P + I++EL+KR E DK+VKDLT LL+ETALLTSGFSLD+
Sbjct: 601 SSMSSYMSSKKTFEISPKSPIIKELKKRVDEGGAQDKTVKDLTKLLYETALLTSGFSLDE 660
Query: 653 PNTFGSRIHRMLKLGLS 669
P +F SRI+R++ LGL+
Sbjct: 661 PTSFASRINRLISLGLN 677
|
| >2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A Length = 666 | Back alignment and structure |
|---|
| >2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A Length = 624 | Back alignment and structure |
|---|
| >1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A Length = 559 | Back alignment and structure |
|---|
| >3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} Length = 444 | Back alignment and structure |
|---|
| >3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A Length = 448 | Back alignment and structure |
|---|
| >2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} Length = 405 | Back alignment and structure |
|---|
| >1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8 Length = 288 | Back alignment and structure |
|---|
| >3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} Length = 268 | Back alignment and structure |
|---|
| >1usu_A Heat shock protein HSP82; chaperone/complex, chaperone, activator, HSP90; 2.15A {Saccharomyces cerevisiae} SCOP: d.14.1.8 PDB: 1usv_A Length = 260 | Back alignment and structure |
|---|
| >2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli} Length = 303 | Back alignment and structure |
|---|
| >1y6z_A Heat shock protein, putative; chaperone, structural genomics, structural genom consortium, SGC, unknown function; 1.88A {Plasmodium falciparum} Length = 263 | Back alignment and structure |
|---|
| >3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A* Length = 281 | Back alignment and structure |
|---|
| >1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A* Length = 269 | Back alignment and structure |
|---|
| >2wer_A ATP-dependent molecular chaperone HSP82; ATPase, ATP-binding, phosphoprotein, stress respo nucleotide-binding; HET: RDC; 1.60A {Saccharomyces cerevisiae} PDB: 2weq_A* 2wep_A* 1zwh_A* 1zw9_A* 2fxs_A* 3c11_A* 3c0e_A* 2yge_A* 2ygf_A* 2akp_A Length = 220 | Back alignment and structure |
|---|
| >1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A* Length = 264 | Back alignment and structure |
|---|
| >3t0h_A Heat shock protein HSP 90-alpha; chaperone, ATPase; 1.20A {Homo sapiens} PDB: 3r4m_A 3t0z_A* 3t10_A* 3t1k_A* 3t2s_A* 1uyl_A 1uy7_A* 1uy8_A* 1uy9_A* 1uyc_A* 1uyd_A* 1uye_A* 1uyf_A* 1uyg_A* 1uyh_A* 1uyk_A* 1uy6_A 2cdd_A* 2uwd_A* 2vci_A* ... Length = 228 | Back alignment and structure |
|---|
| >3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A* Length = 256 | Back alignment and structure |
|---|
| >3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} Length = 239 | Back alignment and structure |
|---|
| >2gqp_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, ligand, NECA, NPCA, adenosine; HET: PA7 PG4 1PE; 1.50A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1tc0_A* 1tbw_A* 1u0z_A* 1u2o_A* 1ysz_A* 1yt0_A* 1yt1_A* 2exl_A* 2fyp_A* 2gfd_A* 1tc6_A* 2h8m_A* 2hch_A* 2hg1_A* 3o2f_A* 2esa_A* Length = 236 | Back alignment and structure |
|---|
| >2ior_A Chaperone protein HTPG; heat shock protein, HSP90; HET: ADP; 1.65A {Escherichia coli} Length = 235 | Back alignment and structure |
|---|
| >3ied_A Heat shock protein; HSP90, chaperone, structural genomics, structura genomics consortium, SGC, stress response; HET: AN2; 2.01A {Plasmodium falciparum} Length = 272 | Back alignment and structure |
|---|
| >1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 Length = 126 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 699 | |||
| 2cg9_A | 677 | ATP-dependent molecular chaperone HSP82; chaperone | 100.0 | |
| 2o1u_A | 666 | Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, | 100.0 | |
| 2ioq_A | 624 | Chaperone protein HTPG; heat shock protein, HSP90; | 100.0 | |
| 1y4s_A | 559 | Chaperone protein HTPG; HSP90, molecular chaperone | 100.0 | |
| 3hjc_A | 444 | Heat shock protein 83-1; sleeping sickness, struct | 100.0 | |
| 3q6m_A | 448 | Heat shock protein HSP 90-alpha; three domains, tr | 100.0 | |
| 2cge_A | 405 | ATP-dependent molecular chaperone HSP82; chaperone | 100.0 | |
| 1hk7_A | 288 | Heat shock protein HSP82; ATPase, chaperone; 2.5A | 100.0 | |
| 2gq0_A | 303 | Chaperone protein HTPG; molecular chaperone, HSP90 | 100.0 | |
| 3pry_A | 268 | Heat shock protein HSP 90-beta; structural genomic | 100.0 | |
| 1usu_A | 260 | Heat shock protein HSP82; chaperone/complex, chape | 100.0 | |
| 1y6z_A | 263 | Heat shock protein, putative; chaperone, structura | 100.0 | |
| 3peh_A | 281 | Endoplasmin homolog; structural genomics, structur | 100.0 | |
| 3ied_A | 272 | Heat shock protein; HSP90, chaperone, structural g | 100.0 | |
| 1qy5_A | 269 | Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: N | 100.0 | |
| 3nmq_A | 239 | Heat shock protein HSP 90-beta; ATPase, chaperone- | 100.0 | |
| 3o0i_A | 256 | HSP90AA1 protein; HSP90 heat-shock proteins, chape | 100.0 | |
| 3t0h_A | 228 | Heat shock protein HSP 90-alpha; chaperone, ATPase | 100.0 | |
| 2gqp_A | 236 | Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, | 100.0 | |
| 2wer_A | 220 | ATP-dependent molecular chaperone HSP82; ATPase, A | 100.0 | |
| 1yc1_A | 264 | HSP 86, heat shock protein HSP 90-alpha; cell-cycl | 100.0 | |
| 2ior_A | 235 | Chaperone protein HTPG; heat shock protein, HSP90; | 100.0 | |
| 1sf8_A | 126 | Chaperone protein HTPG; four helix bundle dimeriza | 99.97 | |
| 1b63_A | 333 | MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A | 99.75 | |
| 1h7s_A | 365 | PMS1 protein homolog 2; DNA repair, GHL ATPase, mi | 99.54 | |
| 3h4l_A | 367 | DNA mismatch repair protein PMS1; ATP binding, DNA | 99.53 | |
| 3na3_A | 348 | DNA mismatch repair protein MLH1; MUTL protein hom | 99.47 | |
| 3fv5_A | 201 | DNA topoisomerase 4 subunit B; topoisomerase IV B | 99.08 | |
| 1mu5_A | 471 | Type II DNA topoisomerase VI subunit B; GHKL ATPas | 98.96 | |
| 1kij_A | 390 | DNA gyrase subunit B; topoisomerase, gyrase B-coum | 98.89 | |
| 2zbk_B | 530 | Type 2 DNA topoisomerase 6 subunit B; DNA binding | 98.89 | |
| 1s16_A | 390 | Topoisomerase IV subunit B; two-domain protein com | 98.8 | |
| 3cwv_A | 369 | DNA gyrase, B subunit, truncated; structural genom | 98.72 | |
| 1ei1_A | 391 | DNA gyrase B, GYRB; ATPase domain, dimer, isomeras | 98.7 | |
| 2q2e_B | 621 | Type 2 DNA topoisomerase 6 subunit B; DNA-binding, | 98.65 | |
| 4duh_A | 220 | DNA gyrase subunit B; structure-based drug design, | 98.64 | |
| 4emv_A | 226 | DNA topoisomerase IV, B subunit; protein-inhibitor | 98.6 | |
| 1zxm_A | 400 | TOPO IIA ATPase, DNA topoisomerase II, alpha isozy | 98.59 | |
| 3lnu_A | 408 | Topoisomerase IV subunit B; PARE, ATP-binding, nuc | 98.33 | |
| 3ttz_A | 198 | DNA gyrase subunit B; protein-inhibitor complex, A | 98.08 | |
| 1pvg_A | 418 | DNA topoisomerase II; GHKL ATPase domain; HET: DNA | 97.98 | |
| 1th8_A | 145 | Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-s | 97.5 | |
| 4ew8_A | 268 | Sensor protein DIVL; signal transduction, two-comp | 97.45 | |
| 1i58_A | 189 | Chemotaxis protein CHEA; beta-alpha sandwich, sign | 97.38 | |
| 2btz_A | 394 | Pyruvate dehydrogenase kinase isoenzyme 2; GHKL mo | 97.36 | |
| 1ysr_A | 150 | Sensor-type histidine kinase PRRB; ATP-binding dom | 97.36 | |
| 3d36_A | 244 | Sporulation kinase B; GHKL ATPase, four helix bund | 97.35 | |
| 3a0y_A | 152 | Sensor protein; ATP-LID, kinase, phosphoprotein, t | 97.29 | |
| 3sl2_A | 177 | Sensor histidine kinase YYCG; ATP binding, intact | 97.25 | |
| 3ehg_A | 128 | Sensor kinase (YOCF protein); GHL ATPase domain, t | 97.23 | |
| 1gkz_A | 388 | [3-methyl-2-oxobutanoate dehydrogenase [lipoamide] | 97.21 | |
| 3ehh_A | 218 | Sensor kinase (YOCF protein); four-helix bundle, G | 97.2 | |
| 1id0_A | 152 | PHOQ histidine kinase; PHOQ/PHOP, signal transduct | 97.19 | |
| 4gfh_A | 1177 | DNA topoisomerase 2; topoisomerase, protein-DNA co | 97.06 | |
| 2e0a_A | 394 | Pyruvate dehydrogenase kinase isozyme 4; PDK4, ATP | 96.98 | |
| 3jz3_A | 222 | Sensor protein QSEC; helix-turn-helix, kinase doma | 96.97 | |
| 2q8g_A | 407 | [pyruvate dehydrogenase [lipoamide]] kinase isozy; | 96.97 | |
| 1y8o_A | 419 | [pyruvate dehydrogenase [lipoamide]] kinase isozy; | 96.91 | |
| 2c2a_A | 258 | Sensor histidine kinase; phosphotransfer, PHOQ, se | 96.88 | |
| 1r62_A | 160 | Nitrogen regulation protein NR(II); PII, histidine | 96.66 | |
| 1bxd_A | 161 | ENVZ(290-450), protein (osmolarity sensor protein | 96.61 | |
| 3zxo_A | 129 | Redox sensor histidine kinase response regulator; | 96.31 | |
| 1b3q_A | 379 | Protein (chemotaxis protein CHEA); histine kinase, | 96.3 | |
| 3a0r_A | 349 | Sensor protein; four helix bundle, PAS fold, kinas | 95.73 | |
| 3zxq_A | 124 | Hypoxia sensor histidine kinase response regulato; | 95.34 | |
| 4fpp_A | 247 | Phosphotransferase; four helix bundle, bergerat fo | 94.07 | |
| 3ke6_A | 399 | Protein RV1364C/MT1410; anti-sigma factor, anti-si | 87.77 |
| >2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-166 Score=1420.82 Aligned_cols=665 Identities=67% Similarity=1.056 Sum_probs=570.2
Q ss_pred CCcccccchhhcHHHHHHHHHhcCCCCchHHHHHHHhcHHHHHHhhhhhhccCCCccCCCCCceEEEEEcCCCCEEEEEe
Q 005370 1 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVD 80 (699)
Q Consensus 1 m~~~e~~~F~~d~~~ll~ll~~~LYs~~~i~lRELIqNA~DA~~k~r~~~~~~~~~~~~~~~~~I~I~~d~~~~~l~I~D 80 (699)
|+ .|+|+||+|+++||+||+++||||+++|||||||||+||++++|++++++++.......+.|+|.++.++++|+|+|
T Consensus 1 ~~-~e~~~Fqae~~~Ll~li~~sLYsnkeifLRELIsNA~DA~~k~r~~~ltd~~~~~~~~~~~I~I~~d~~~~~I~I~D 79 (677)
T 2cg9_A 1 MA-SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKPEQKVLEIRD 79 (677)
T ss_dssp -C-CEEEECCCCHHHHHHHHHHSCCSCTTHHHHHHHHHHHHHHHHHHHHTSSCTTTTTTCCCCCEEEEEEGGGTEEEEEE
T ss_pred CC-ccceehhhhHHHHHHHHHHhCCCCchHHHHHHhhCHHHHHHHHHHHhccChhhccCCCCcEEEEEEeCCCCEEEEEE
Confidence 55 58999999999999999999999999999999999999999999999999988777778899999988889999999
Q ss_pred CCCCCCHHHHHHHHhhhhccCchhHHHHHhcCCCCCccccccchhhheeeecCeEEEEEecCCCceEEEEEccCceEEEE
Q 005370 81 SGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVT 160 (699)
Q Consensus 81 nGiGMt~~el~~~l~~Ia~S~~~~f~~~~~~~~~~~~iG~FGIGf~S~F~vad~v~V~T~~~~~~~~~w~~~~~~~~~i~ 160 (699)
||+|||++||.++|++||+||++.|+++++.+.+...||||||||||+||+|++|+|+|++.++.++.|+++|++.|+|.
T Consensus 80 nGiGMt~edl~~~l~tIA~Sgt~~f~~kl~~~~d~~~IGqFGvGFySaf~vadkV~V~Sk~~~~~~~~W~s~g~~~~ti~ 159 (677)
T 2cg9_A 80 SGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVT 159 (677)
T ss_dssp CSCCCCHHHHHGGGSSSSSCTTHHHHSCCCSSCCCCCCCCTTCTTGGGGGTEEEEEEEEECTTSCEEEEEECSSSEEEEE
T ss_pred CCCCCCHHHHHHHHHhHhccccHHHHHhhhcccchhhcCCCCchhHHHhhcCcEEEEEEccCCCceEEEEEcCCceEEEe
Confidence 99999999999999999999999998877655567899999999999999999999999987778999999999999999
Q ss_pred eCCCCCCCCCceEEEEEeccchhhcccHHHHHHHHHHhcCCCccceEeecccccccccCCCCCCC-----------cccc
Q 005370 161 RDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISDDEDDE-----------PKKE 229 (699)
Q Consensus 161 ~~~~~~~~~~GT~I~L~lk~~~~~~~~~~~l~~ii~~ys~fl~~pI~~~~~~~~~~~~~~~~~~~-----------~~~~ 229 (699)
+++.+...++||+|+|||+++..+|++.++|+++|++||+|++|||+++..++.+++++++++++ ++++
T Consensus 160 ~~~~~~~~~~GT~I~L~Lk~d~~e~l~~~~i~~lvkkys~fi~~PI~l~~~k~~~~~~~~~e~~~~~~~~~~e~~~~~~~ 239 (677)
T 2cg9_A 160 LDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLVVTKEVEKEVPIPEEEKKDEEKKDEEKKDEDD 239 (677)
T ss_dssp ECCSSCCCSSEEEEEEEECTTGGGGGCHHHHHHHHHHHSTTCSSCEEECCCCCCCCC-----------------------
T ss_pred ecCCCCCCCCCeEEEEEEcchhhccccHHHHHHHHHHHHhhCCCCeEEeeccccccCcCcchhhhccccccccccccccc
Confidence 85323456899999999999999999999999999999999999999986543333332211100 0001
Q ss_pred ccCCccccchHHHhhhcccccccccccceeeeccCCCCccCCCCCCCHHHHHHHHHHhhcCccCCceeeeeecccceeeE
Q 005370 230 EEGDVEDVDEEKEKEGKKKKKIKEVSHEWQLINKQKPIWLRKPEEITKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFK 309 (699)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~piW~~~~~~v~~eey~~fyk~~~~~~~~pl~~~h~~~eg~~~~~ 309 (699)
+.+++++++++++ +.+++++++++..+|++||+++|||+|+|++||+|||.+|||+++++|++||+|+||++||+++|+
T Consensus 240 ~~~~~~~~~~~~~-~~~~~k~~~~~~~e~e~iN~~~plW~r~~~eit~eeY~~FYk~l~~d~~~pl~~~H~~veg~~~~~ 318 (677)
T 2cg9_A 240 KKPKLEEVDEEEE-KKPKTKKVKEEVQEIEELNKTKPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFR 318 (677)
T ss_dssp -----------------------CCCCCBCCCCCCCCTTSSCGGGCCTTTHHHHHHHHTTCCSCCSEEEEEEECSSSCEE
T ss_pred cccccccccchhh-hcccccccccccccceecccCCCCcccCcccCCHHHHHHHHHHhcCCCCCchheEEecccccceEE
Confidence 1122222111110 123345555667799999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCCCcchhhhcccceEEEeeceeccccccccccccccceeeeecCCCCCCccchhhhcccHHHHHHHHHHHH
Q 005370 310 AVLFVPKRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEYLGFIKGVVDSDDLPLNISREMLQQNKILKVIRKNLVK 389 (699)
Q Consensus 310 ~llyiP~~~p~~~~~~~~~~~~i~LY~~rv~I~d~~~~llP~~l~Fv~GvVDS~dLplnvSRE~lq~~~~l~~i~~~l~~ 389 (699)
||||||+++||++|.+.+.++||+||||||||+|+|++|||+||+||||||||+|||||||||+||+|++|++||+.|++
T Consensus 319 ~lLyiP~~ap~d~~~~~~~~~~ikLYv~rVfI~d~~~~llP~yL~FvkGVVDS~DLpLNvSRE~LQ~~~~lk~I~~~l~k 398 (677)
T 2cg9_A 319 AILFIPKRAPFDLFESKKKKNNIKLYVRRVFITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVK 398 (677)
T ss_dssp EEEEECSSCCC---------CCSEEEETTEEEEECSTTTSCGGGTTCEEEEEESSCCCCBTTTBCCCHHHHHHHHHHHHH
T ss_pred EEEEEcCCCchhhhhhhhccCCeEEEEeeeEeecChhhhchHHHHHheeecccCCCCcccCHHHhccCHHHHHHHHHHHH
Confidence 99999999999999755567999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHhHHhhccccCChhhHHHHhchhcccccCCCCceecHHHHHHhhcCCCceEEEEeCCC
Q 005370 390 KCIEMFNEIAENKEDYNKFYDAFSKNLKLGIHEDSQNRAKLADLLRYHSTKSSEEFTSLKDYVTRMKEGQKDIYYITGES 469 (699)
Q Consensus 390 k~~~~L~~la~d~e~y~~f~~~~~~~lK~G~~eD~~~~e~l~~lLrf~ss~~~~~~~sL~eY~~rm~~~Q~~IyY~~~~~ 469 (699)
|++++|.+||+|+++|++||++||.+||+|+++|+.||++|++||||+||.++++++||++|++|||++|+.|||++|++
T Consensus 399 kvl~~l~~la~~~e~y~~f~~~fg~~lK~G~~eD~~nr~~l~~llrf~ss~~~~~~~sL~eYv~rmke~Q~~IyY~t~~s 478 (677)
T 2cg9_A 399 KLIEAFNEIAEDSEQFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYYITGES 478 (677)
T ss_dssp HHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHCSSSHHHHHTTCCBEESSCTTSCBCSTTHHHHSCTTCCEEEEEECSC
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHhHHhhhhhccCHHHHHHHHhheEeeecCCCCceeeHHHHHHhccccCceEEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999976689999999999999999999999999
Q ss_pred HHHHhcChhhHHHHHcCCEEEEecCCchHHHHHHHhhccCceeEeccccCCCCCcchHHHHhhHHHhHHhHHHHHHHHHH
Q 005370 470 KKAVENSPFLERLKKKGYEVLYMVDAIDEYAVGQLKEYEGKKLVSATKEGLKLDDETEEEKKKKEEKKKSFENLCKTMKD 549 (699)
Q Consensus 470 ~~~~~~sp~lE~~~~kG~eVL~l~dpiDE~~l~~L~~~~~~~f~~V~~~~~~l~~~~~~~~~~~~~~~~e~~~L~~~~k~ 549 (699)
++++++|||+|.|+++|||||||++||||+|+++|.+|+|++|++|+++ ++|++ .+++++..++.++++++|++|||+
T Consensus 479 ~~~~~~sp~~E~~~~kg~EVl~l~~~iDe~~~~~l~e~~gk~~~~v~k~-l~l~~-~e~~~~~~~~~~~~~~~L~~~~k~ 556 (677)
T 2cg9_A 479 LKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGKTLVDITKD-FELEE-TDEEKAEREKEIKEYEPLTKALKE 556 (677)
T ss_dssp STTTTTCGGGHHHHTTTCCEEEECSHHHHHHHGGGSCBTTBEEECSCCC-CCSCS-STTSSTTHHHHHGGGHHHHHHHHH
T ss_pred HHHHHhCcHHHHHHhCCceEEEeCCchHHHHHHHHHHhCCceEEEeecc-ccccc-chhhhhhhhhhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 98876 333344445567789999999999
Q ss_pred HhCCcccEEEEeecCCCCCEEEEeCCCCccHHHHHHHHHHhcccCccccccCCCceEEeCCCChHHHHHHHhhhcc-CCc
Q 005370 550 ILGDRVEKVVVSDRIVDSPCCLVTGEYGWSANMERIMKAQALRDNSMSSYMSSKKTMEINPDNGIMEELRKRAEAD-KND 628 (699)
Q Consensus 550 ~L~~~V~~V~vs~rL~dsP~~lv~~e~g~s~~mer~mka~~~~~~~~~~~~~~k~~LeiNp~HplIk~L~~~~~~~-~~~ 628 (699)
+|+++|.+|++|+||+++|||+|++++|||++|+|||++|+++++.+.+++.++++|||||+||||++|..+...+ .++
T Consensus 557 ~L~~~v~~V~~s~rl~~sP~~lv~~~~~~s~~merimka~~~~d~~~~~~~~~k~~LeiNp~hpli~~L~~~~~~d~~~~ 636 (677)
T 2cg9_A 557 ILGDQVEKVVVSYKLLDAPAAIRTGQFGWSANMERIMKAQALRDSSMSSYMSSKKTFEISPKSPIIKELKKRVDEGGAQD 636 (677)
T ss_dssp TTCSSCSCEECCSSCSSSCEEEECCTTSCCHHHHHHHTTCC-------------CEEEECTTCHHHHHHHHHHHTCCSSC
T ss_pred hcCCcceEEEEeccCCCCCEEEEeCcccccHHHHHHHHHhhccccccccccccCceEEEcCCCHHHHHHHHhhhccccCH
Confidence 9999999999999999999999999999999999999998766554555677899999999999999998876543 345
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhcCC
Q 005370 629 KSVKDLTMLLFETALLTSGFSLDDPNTFGSRIHRMLKLGLS 669 (699)
Q Consensus 629 ~~~~~~~~~Lyd~AlL~~G~~l~d~~~f~~r~~~ll~~~l~ 669 (699)
+.++++|++||+||||++|++++||+.|++|+|+||.++|+
T Consensus 637 ~~~~~~~~~Lyd~All~~G~~l~dp~~f~~ri~~ll~~~l~ 677 (677)
T 2cg9_A 637 KTVKDLTKLLYETALLTSGFSLDEPTSFASRINRLISLGLN 677 (677)
T ss_dssp SSSSTTHHHHHHHHHHHTTCCCSSTTHHHHHHHHTSSSSCC
T ss_pred HHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHhcC
Confidence 67899999999999999999999999999999999987664
|
| >2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A | Back alignment and structure |
|---|
| >2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A | Back alignment and structure |
|---|
| >1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A | Back alignment and structure |
|---|
| >3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} | Back alignment and structure |
|---|
| >3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A | Back alignment and structure |
|---|
| >2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8 | Back alignment and structure |
|---|
| >2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli} | Back alignment and structure |
|---|
| >3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} SCOP: d.14.1.8 | Back alignment and structure |
|---|
| >1usu_A Heat shock protein HSP82; chaperone/complex, chaperone, activator, HSP90; 2.15A {Saccharomyces cerevisiae} SCOP: d.14.1.8 PDB: 1usv_A | Back alignment and structure |
|---|
| >1y6z_A Heat shock protein, putative; chaperone, structural genomics, structural genom consortium, SGC, unknown function; 1.88A {Plasmodium falciparum} | Back alignment and structure |
|---|
| >3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A* | Back alignment and structure |
|---|
| >3ied_A Heat shock protein; HSP90, chaperone, structural genomics, structura genomics consortium, SGC, stress response; HET: AN2; 2.01A {Plasmodium falciparum} | Back alignment and structure |
|---|
| >1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A* | Back alignment and structure |
|---|
| >3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} SCOP: d.122.1.1 | Back alignment and structure |
|---|
| >3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A* | Back alignment and structure |
|---|
| >3t0h_A Heat shock protein HSP 90-alpha; chaperone, ATPase; 1.20A {Homo sapiens} SCOP: d.122.1.1 PDB: 3r4m_A 3t0z_A* 3t10_A* 3t1k_A* 3t2s_A* 1uyl_A 1uy7_A* 1uy8_A* 1uy9_A* 1uyc_A* 1uyd_A* 1uye_A* 1uyf_A* 1uyg_A* 1uyh_A* 1uyk_A* 1uy6_A 2cdd_A* 2uwd_A* 2vci_A* ... | Back alignment and structure |
|---|
| >2gqp_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, ligand, NECA, NPCA, adenosine; HET: PA7 PG4 1PE; 1.50A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1tc0_A* 1tbw_A* 1u0z_A* 1u2o_A* 1ysz_A* 1yt0_A* 1yt1_A* 2exl_A* 2fyp_A* 2gfd_A* 1tc6_A* 2h8m_A* 2hch_A* 2hg1_A* 3o2f_A* 2esa_A* | Back alignment and structure |
|---|
| >2wer_A ATP-dependent molecular chaperone HSP82; ATPase, ATP-binding, phosphoprotein, stress respo nucleotide-binding; HET: RDC; 1.60A {Saccharomyces cerevisiae} PDB: 2weq_A* 2wep_A* 1zwh_A* 1zw9_A* 2fxs_A* 3c11_A* 3c0e_A* 2yge_A* 2ygf_A* 2akp_A | Back alignment and structure |
|---|
| >1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A* | Back alignment and structure |
|---|
| >2ior_A Chaperone protein HTPG; heat shock protein, HSP90; HET: ADP; 1.65A {Escherichia coli} | Back alignment and structure |
|---|
| >1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 | Back alignment and structure |
|---|
| >1b63_A MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A {Escherichia coli K12} SCOP: d.14.1.3 d.122.1.2 PDB: 1nhh_A* 1nhi_A* 1bkn_A 1nhj_A* 1b62_A* | Back alignment and structure |
|---|
| >1h7s_A PMS1 protein homolog 2; DNA repair, GHL ATPase, mismatch repair, HNPCC; 1.95A {Homo sapiens} SCOP: d.14.1.3 d.122.1.2 PDB: 1h7u_A* 1ea6_A* | Back alignment and structure |
|---|
| >3h4l_A DNA mismatch repair protein PMS1; ATP binding, DNA repair, DNA damage, nucleus, phosphop DNA binding protein, protein binding; HET: DNA ANP; 2.50A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3na3_A DNA mismatch repair protein MLH1; MUTL protein homolog 1, DNA damag repair, structural genomics consortium, SGC, protein bindin; HET: DNA ATP; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
| >3fv5_A DNA topoisomerase 4 subunit B; topoisomerase IV B subunit complex, antibiotic resistance, ATP-binding, nucleotide-binding; HET: DNA 1EU; 1.80A {Escherichia coli} PDB: 1s14_A* | Back alignment and structure |
|---|
| >1mu5_A Type II DNA topoisomerase VI subunit B; GHKL ATPase, helix two-turns helix; 2.00A {Sulfolobus shibatae} SCOP: a.156.1.3 d.14.1.3 d.122.1.2 PDB: 1mx0_A* 1z5b_A* 1z5a_A* 1z59_A* 1z5c_A* 2hkj_A* | Back alignment and structure |
|---|
| >1kij_A DNA gyrase subunit B; topoisomerase, gyrase B-coumarin complex, isomerase; HET: DNA NOV; 2.30A {Thermus thermophilus} SCOP: d.14.1.3 d.122.1.2 | Back alignment and structure |
|---|
| >2zbk_B Type 2 DNA topoisomerase 6 subunit B; DNA binding protein, decatenation, ATPase, drug design, DNA-binding, magnesium, metal-binding; HET: RDC; 3.56A {Sulfolobus shibatae} | Back alignment and structure |
|---|
| >1s16_A Topoisomerase IV subunit B; two-domain protein complexed with ADPNP; HET: ANP; 2.10A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2 | Back alignment and structure |
|---|
| >3cwv_A DNA gyrase, B subunit, truncated; structural genomics, unknown function, B-subunit binding, isomerase, nucleotide-binding, topoisomerase; HET: DNA; 1.95A {Myxococcus xanthus} | Back alignment and structure |
|---|
| >1ei1_A DNA gyrase B, GYRB; ATPase domain, dimer, isomerase; HET: DNA ANP; 2.30A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2 | Back alignment and structure |
|---|
| >2q2e_B Type 2 DNA topoisomerase 6 subunit B; DNA-binding, SPO11, ATPase; 4.00A {Methanosarcina mazei} | Back alignment and structure |
|---|
| >4duh_A DNA gyrase subunit B; structure-based drug design, antibacterial, DNA gyrase B, GY isomerase-isomerase inhibitor complex; HET: DNA RLI; 1.50A {Escherichia coli} PDB: 1aj6_A* 1kzn_A* 3g7e_A* | Back alignment and structure |
|---|
| >4emv_A DNA topoisomerase IV, B subunit; protein-inhibitor complex, ATP binding, structure-based drug antimicrobial, virtual screen; HET: DNA 0R9; 1.70A {Streptococcus pneumoniae GA47373} PDB: 4em7_A* | Back alignment and structure |
|---|
| >1zxm_A TOPO IIA ATPase, DNA topoisomerase II, alpha isozyme; GHKL nucleotide-binding fold; HET: DNA ANP; 1.87A {Homo sapiens} PDB: 1zxn_A* | Back alignment and structure |
|---|
| >3lnu_A Topoisomerase IV subunit B; PARE, ATP-binding, nucleotide-BI topoisomerase; 2.20A {Xanthomonas oryzae PV} PDB: 3lps_A* | Back alignment and structure |
|---|
| >3ttz_A DNA gyrase subunit B; protein-inhibitor complex, ATP-binding, structure-based drug antimicrobial, isomerase-isomerase inhibitor complex; HET: DNA 07N; 1.63A {Staphylococcus aureus} PDB: 3u2d_A* 3u2k_A* 3g75_A* 3g7b_A* | Back alignment and structure |
|---|
| >1pvg_A DNA topoisomerase II; GHKL ATPase domain; HET: DNA ANP; 1.80A {Saccharomyces cerevisiae} SCOP: d.14.1.3 d.122.1.2 PDB: 1qzr_A* | Back alignment and structure |
|---|
| >1th8_A Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: d.122.1.3 PDB: 1thn_A* 1til_A* 1l0o_A* 1tid_A* | Back alignment and structure |
|---|
| >4ew8_A Sensor protein DIVL; signal transduction, two-component regulatory system, hiska GHKL domain, structural genomics; 2.50A {Caulobacter crescentus} | Back alignment and structure |
|---|
| >1i58_A Chemotaxis protein CHEA; beta-alpha sandwich, signaling protein, transferase; HET: ACP ADP; 1.60A {Thermotoga maritima} SCOP: d.122.1.3 PDB: 1i59_A* 1i5a_A* 1i5b_A* 1i5c_A* 1i5d_A* | Back alignment and structure |
|---|
| >2btz_A Pyruvate dehydrogenase kinase isoenzyme 2; GHKL motif regulation, transferase; 2.2A {Homo sapiens} PDB: 2bu2_A* 2bu5_A* 2bu6_A* 2bu7_A* 2bu8_A* 3crk_A* 1jm6_A* 3crl_A* | Back alignment and structure |
|---|
| >1ysr_A Sensor-type histidine kinase PRRB; ATP-binding domain, structural genomics, mycobacterium tuberculosis structural proteomics project; 1.78A {Mycobacterium tuberculosis} SCOP: d.122.1.3 PDB: 1ys3_A | Back alignment and structure |
|---|
| >3d36_A Sporulation kinase B; GHKL ATPase, four helix bundle, class I two-component histidine kinase, phosphoprotein; HET: ADP; 2.03A {Geobacillus stearothermophilus} | Back alignment and structure |
|---|
| >3a0y_A Sensor protein; ATP-LID, kinase, phosphoprotein, transferase, two-component regulatory system; 1.57A {Thermotoga maritima} PDB: 3a0t_A* 3a0x_A 3a0w_A 3a0z_A | Back alignment and structure |
|---|
| >3sl2_A Sensor histidine kinase YYCG; ATP binding, intact ATP, bergerat fold, TR; HET: ATP; 1.61A {Bacillus subtilis} | Back alignment and structure |
|---|
| >3ehg_A Sensor kinase (YOCF protein); GHL ATPase domain, transferase; HET: ATP; 1.74A {Bacillus subtilis} | Back alignment and structure |
|---|
| >1gkz_A [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase; transferase, mitochondrial protein kinase, potassium; HET: ADP; 2.2A {Rattus norvegicus} SCOP: a.29.5.1 d.122.1.4 PDB: 1gjv_A 1gkx_A* | Back alignment and structure |
|---|
| >3ehh_A Sensor kinase (YOCF protein); four-helix bundle, GHL ATPase domain, transferase; HET: MSE ADP; 2.10A {Bacillus subtilis} PDB: 3ehj_A* 3gie_A* 3gif_A* 3gig_A* 3ehf_A* | Back alignment and structure |
|---|
| >1id0_A PHOQ histidine kinase; PHOQ/PHOP, signal transduction, transferase; HET: ANP; 1.60A {Escherichia coli} SCOP: d.122.1.3 PDB: 3cgz_A 3cgy_A | Back alignment and structure |
|---|
| >4gfh_A DNA topoisomerase 2; topoisomerase, protein-DNA complex, DNA supercoiling, DNA replication; HET: DNA PTR TSP ANP; 4.41A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >2e0a_A Pyruvate dehydrogenase kinase isozyme 4; PDK4, ATP-binding, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: ANP; 1.86A {Homo sapiens} PDB: 2zdx_A* 2zdy_A* 2zkj_A* 3d2r_A* | Back alignment and structure |
|---|
| >3jz3_A Sensor protein QSEC; helix-turn-helix, kinase domain, ATP-binding, cell inner MEM cell membrane, kinase, membrane, nucleotide-binding; 2.50A {Escherichia coli} | Back alignment and structure |
|---|
| >2q8g_A [pyruvate dehydrogenase [lipoamide]] kinase isozy; GHKL ATPase/kinase family, pyruvate dehydrogenase complex, mitochondrial kinase; HET: AZX; 1.90A {Homo sapiens} PDB: 2q8f_A* 2q8h_A | Back alignment and structure |
|---|
| >1y8o_A [pyruvate dehydrogenase [lipoamide]] kinase isozy; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: a.29.5.1 d.122.1.4 PDB: 1y8n_A* 1y8p_A* 2pnr_A* 2q8i_A* | Back alignment and structure |
|---|
| >2c2a_A Sensor histidine kinase; phosphotransfer, PHOQ, selenomethionyl MAD, two-component systems, transferase; HET: ADP; 1.9A {Thermotoga maritima} SCOP: a.30.2.1 d.122.1.3 PDB: 3dge_A* | Back alignment and structure |
|---|
| >1r62_A Nitrogen regulation protein NR(II); PII, histidine kinase, two component system, transfera; 1.60A {Escherichia coli} SCOP: d.122.1.3 | Back alignment and structure |
|---|
| >1bxd_A ENVZ(290-450), protein (osmolarity sensor protein (ENVZ)); histidine kinase, osmosensor, His-Asp phosphorelay system, signal transduction; HET: ANP; NMR {Escherichia coli BL21} SCOP: d.122.1.3 | Back alignment and structure |
|---|
| >3zxo_A Redox sensor histidine kinase response regulator; transferase; HET: MSE; 1.90A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >1b3q_A Protein (chemotaxis protein CHEA); histine kinase, signal transduction, multi-domai protein, transferase; 2.60A {Thermotoga maritima} SCOP: a.30.2.1 b.40.7.1 d.122.1.3 PDB: 2ch4_A* 3ur1_A | Back alignment and structure |
|---|
| >3a0r_A Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transfe two-component regulatory system; 3.80A {Thermotoga maritima} | Back alignment and structure |
|---|
| >3zxq_A Hypoxia sensor histidine kinase response regulato; transferase; 1.90A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >4fpp_A Phosphotransferase; four helix bundle, bergerat fold, CCKA, CTRA, CPDR, bacterial cytoplasme; 2.20A {Caulobacter crescentus} PDB: 4fmt_A | Back alignment and structure |
|---|
| >3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 699 | ||||
| d1usua_ | 256 | d.14.1.8 (A:) Heat shock protein hsp82 {Baker's ye | 1e-106 | |
| d2iwxa1 | 213 | d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharo | 1e-72 | |
| d1uyla_ | 208 | d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: | 3e-71 | |
| d2gqpa1 | 227 | d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) | 1e-70 | |
| d1sf8a_ | 115 | d.271.1.1 (A:) Chaperone protein HtpG {Escherichia | 1e-32 |
| >d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ribosomal protein S5 domain 2-like superfamily: Ribosomal protein S5 domain 2-like family: Hsp90 middle domain domain: Heat shock protein hsp82 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 321 bits (823), Expect = e-106
Identities = 184/254 (72%), Positives = 218/254 (85%)
Query: 265 KPIWLRKPEEITKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFD 324
KP+W R P +IT+EEY +FYKS++NDWED L VKHFSVEGQLEF+A+LF+PKRAPFDLF+
Sbjct: 3 KPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFE 62
Query: 325 TRKKMNNIKLYVRRVFIMDNCEELIPEYLGFIKGVVDSDDLPLNISREMLQQNKILKVIR 384
++KK NNIKLYVRRVFI D E+LIPE+L F+KGVVDS+DLPLN+SREMLQQNKI+KVIR
Sbjct: 63 SKKKKNNIKLYVRRVFITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIR 122
Query: 385 KNLVKKCIEMFNEIAENKEDYNKFYDAFSKNLKLGIHEDSQNRAKLADLLRYHSTKSSEE 444
KN+VKK IE FNEIAE+ E + KFY AFSKN+KLG+HED+QNRA LA LLRY+STKS +E
Sbjct: 123 KNIVKKLIEAFNEIAEDSEQFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKSVDE 182
Query: 445 FTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLERLKKKGYEVLYMVDAIDEYAVGQL 504
TSL DYVTRM E QK+IYYITGES K+VE SPFL+ LK K +EVL++ D IDEYA QL
Sbjct: 183 LTSLTDYVTRMPEHQKNIYYITGESLKSVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQL 242
Query: 505 KEYEGKKLVSATKE 518
KE+EGK LV TK+
Sbjct: 243 KEFEGKTLVDITKD 256
|
| >d2iwxa1 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 213 | Back information, alignment and structure |
|---|
| >d1uyla_ d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 9606]} Length = 208 | Back information, alignment and structure |
|---|
| >d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]} Length = 227 | Back information, alignment and structure |
|---|
| >d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} Length = 115 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 699 | |||
| d1usua_ | 256 | Heat shock protein hsp82 {Baker's yeast (Saccharom | 100.0 | |
| d2gqpa1 | 227 | HSP90 {Dog (Canis familiaris) [TaxId: 9615]} | 100.0 | |
| d2iwxa1 | 213 | HSP90 {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1uyla_ | 208 | HSP90 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1sf8a_ | 115 | Chaperone protein HtpG {Escherichia coli [TaxId: 5 | 99.97 | |
| d1h7sa2 | 203 | DNA mismatch repair protein PMS2 {Human (Homo sapi | 99.43 | |
| d1b63a2 | 218 | DNA mismatch repair protein MutL {Escherichia coli | 99.34 | |
| d2hkja3 | 219 | Topoisomerase VI-B subunit {Archaeon Sulfolobus sh | 99.31 | |
| d1pvga2 | 239 | DNA topoisomerase II {Baker's yeast (Saccharomyces | 98.17 | |
| d1kija2 | 212 | DNA gyrase B {Thermus thermophilus [TaxId: 274]} | 98.04 | |
| d1ei1a2 | 219 | DNA gyrase B {Escherichia coli [TaxId: 562]} | 97.87 | |
| d1gkza2 | 193 | Branched-chain alpha-ketoacid dehydrogenase kinase | 97.73 | |
| d1jm6a2 | 190 | Pyruvate dehydrogenase kinase {Rat (Rattus norvegi | 97.54 | |
| d1th8a_ | 139 | Anti-sigma factor spoIIab {Bacillus stearothermoph | 97.43 | |
| d1y8oa2 | 125 | Pyruvate dehydrogenase kinase {Human (Homo sapiens | 97.43 | |
| d2c2aa2 | 161 | Sensor histidine kinase TM0853 {Thermotoga maritim | 97.32 | |
| d1bxda_ | 161 | Histidine kinase domain of the osmosensor EnvZ {Es | 97.32 | |
| d1ysra1 | 148 | Sensor-type histidine kinase PrrB {Mycobacterium t | 97.29 | |
| d1id0a_ | 146 | Histidine kinase PhoQ domain {Escherichia coli [Ta | 97.27 | |
| d1s14a_ | 168 | Topoisomerase IV subunit B {Escherichia coli [TaxI | 96.43 | |
| d1ixma_ | 179 | Sporulation response regulatory protein Spo0B {Bac | 95.72 | |
| d1r62a_ | 156 | Nitrogen regulation protein NtrB, C-terminal domai | 95.07 |
| >d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ribosomal protein S5 domain 2-like superfamily: Ribosomal protein S5 domain 2-like family: Hsp90 middle domain domain: Heat shock protein hsp82 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=6.4e-84 Score=660.42 Aligned_cols=255 Identities=72% Similarity=1.158 Sum_probs=239.9
Q ss_pred CCCCccCCCCCCCHHHHHHHHHHhhcCccCCceeeeeecccceeeEEEEEecCCCCCCcchhhhcccceEEEeeceeccc
Q 005370 264 QKPIWLRKPEEITKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTRKKMNNIKLYVRRVFIMD 343 (699)
Q Consensus 264 ~~piW~~~~~~v~~eey~~fyk~~~~~~~~pl~~~h~~~eg~~~~~~llyiP~~~p~~~~~~~~~~~~i~LY~~rv~I~d 343 (699)
.+|||+|+|++||+|||.+|||++++++++||+|+||++||+++|+||||||+++|+++|.....++||+||||||||+|
T Consensus 2 tkpiW~r~~~eit~eeY~~FYk~l~~~~~~Pl~~iH~~~eg~~~~~~lLyiP~~~p~~~~~~~~~~~~ikLY~~rVfI~d 81 (256)
T d1usua_ 2 TKPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFESKKKKNNIKLYVRRVFITD 81 (256)
T ss_dssp CCCGGGSCGGGCCHHHHHHHHHHHHCCSSCCSEEEEEEECSSSCEEEEEEECSSCCTTTTCC----CCEEEEETTEEEES
T ss_pred CCCCccCCchhCCHHHHHHHHHhhcCCccCCceeEEeeeeeeEEEEEEEEecccCcchhhhhhhhcCCeEEEEEeeeecc
Confidence 47999999999999999999999999999999999999999999999999999999999875556789999999999999
Q ss_pred cccccccccccceeeeecCCCCCCccchhhhcccHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHhHHhhccccCC
Q 005370 344 NCEELIPEYLGFIKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYNKFYDAFSKNLKLGIHED 423 (699)
Q Consensus 344 ~~~~llP~~l~Fv~GvVDS~dLplnvSRE~lq~~~~l~~i~~~l~~k~~~~L~~la~d~e~y~~f~~~~~~~lK~G~~eD 423 (699)
+|++|||+||+||+|||||+|||||||||+||+|+++++|++.|++||+++|+++++|+++|++||++||.+||+||++|
T Consensus 82 ~~~~llP~~L~FvkGVVDS~DlpLNVSRE~LQ~~~~l~kI~~~i~kkv~~~L~~~~~d~eky~~fw~~fg~~lK~G~~~D 161 (256)
T d1usua_ 82 EAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIEAFNEIAEDSEQFEKFYSAFSKNIKLGVHED 161 (256)
T ss_dssp CCTTSSCGGGTTCEEEEEESSCCSCC------CCHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred chhhHHHHHHHHhhhccccccCCcccchhhhcccHHHHHHHHHHHHHHHHHHHHhhhCHHHHHHHHHHHhHHHhhhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHhchhcccccCCCCceecHHHHHHhhcCCCceEEEEeCCCHHHHhcChhhHHHHHcCCEEEEecCCchHHHHHH
Q 005370 424 SQNRAKLADLLRYHSTKSSEEFTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLERLKKKGYEVLYMVDAIDEYAVGQ 503 (699)
Q Consensus 424 ~~~~e~l~~lLrf~ss~~~~~~~sL~eY~~rm~~~Q~~IyY~~~~~~~~~~~sp~lE~~~~kG~eVL~l~dpiDE~~l~~ 503 (699)
.+|++++++||||+||.+.++++||+||++||+++|+.|||++|++++++++|||+|+|+++|||||||+|||||+|+++
T Consensus 162 ~~~~e~l~~ll~f~ss~s~~e~~SL~eYvermke~Qk~IyYi~~~s~~~~~~sP~lE~~k~kg~EVL~l~dpiDe~~i~~ 241 (256)
T d1usua_ 162 TQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYYITGESLKSVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQ 241 (256)
T ss_dssp TTTHHHHHTTCEEEETTEEEEEEEHHHHHHTSCTTCCEEEEEECSSHHHHHTCTTHHHHHHTTCCEEEECSHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhccCCCcceeeHHHHHhhccccccceEEEecCCHHHHHcCHHHHHHHHCCCEEEEecCchHHHHHHH
Confidence 99999999999999998767899999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccCceeEecccc
Q 005370 504 LKEYEGKKLVSATKE 518 (699)
Q Consensus 504 L~~~~~~~f~~V~~~ 518 (699)
|.+|+|++|++|+++
T Consensus 242 l~e~~~kkf~sV~ke 256 (256)
T d1usua_ 242 LKEFEGKTLVDITKD 256 (256)
T ss_dssp HCEETTEEEEETTCC
T ss_pred HHHhCCCceeecCCC
Confidence 999999999999874
|
| >d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
| >d2iwxa1 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1uyla_ d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1h7sa2 d.122.1.2 (A:29-231) DNA mismatch repair protein PMS2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2hkja3 d.122.1.2 (A:10-228) Topoisomerase VI-B subunit {Archaeon Sulfolobus shibatae [TaxId: 2286]} | Back information, alignment and structure |
|---|
| >d1pvga2 d.122.1.2 (A:7-245) DNA topoisomerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1kija2 d.122.1.2 (A:9-220) DNA gyrase B {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1ei1a2 d.122.1.2 (A:2-220) DNA gyrase B {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1gkza2 d.122.1.4 (A:186-378) Branched-chain alpha-ketoacid dehydrogenase kinase (BCK) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1jm6a2 d.122.1.4 (A:1177-1366) Pyruvate dehydrogenase kinase {Rat (Rattus norvegicus), isozyme 2 [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1th8a_ d.122.1.3 (A:) Anti-sigma factor spoIIab {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1y8oa2 d.122.1.4 (A:177-301) Pyruvate dehydrogenase kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2c2aa2 d.122.1.3 (A:321-481) Sensor histidine kinase TM0853 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1bxda_ d.122.1.3 (A:) Histidine kinase domain of the osmosensor EnvZ {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1ysra1 d.122.1.3 (A:299-446) Sensor-type histidine kinase PrrB {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1id0a_ d.122.1.3 (A:) Histidine kinase PhoQ domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1s14a_ d.122.1.2 (A:) Topoisomerase IV subunit B {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1ixma_ d.123.1.1 (A:) Sporulation response regulatory protein Spo0B {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1r62a_ d.122.1.3 (A:) Nitrogen regulation protein NtrB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|