Citrus Sinensis ID: 005451

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690------
MGGYKKQARTSDQSSIKCRCNPVEGASFELADFVSKEDALALADNSKQTNKKAEPKSPMILSTAQLIAAVGQLWDSANRLAIFHPKGNLIDSHSECKKEVLRNLDKEENAWVPLSTDSKYFCVDVSSAGQFSPMVQPNLEFLKVTQKMSVFDSCSKKFAHSTFWTFLRSGASLSNDTCVWGLASAGIPYQLGNVHRWMTEKFPAGFTYADSIPDSEKREAGEQCILGDTTGCAGASISGDTLSPASKPATEDHNKSDLSKSKGQSSCFNAKLMMSTRTTKSLLSDYFLKDVSDMKEDCDVTRQPCSSLCADYCINSVASSNGTCEKCRHLMDDDALLENKRNQSDKNVVEDENKMEFHSPKTEKPHLSLAKQEHAFAGALAGVFVSLCLHPVDTVKTVIQSCHTEQKSIVYIGRSIVSERGLTGLYRGIASNIASSAPISAVYAFTYESVKGALLPHLPKEFHSLAHCTAGGCASVATSFIFTPSERIKQQMQVGSRYHNCWNALVGIIKNGGLHSLYAGWGAVLCRNVPHSIVKFYTYESLKQMMLPSLKPGAQPNTIETLICGGVAGSTAALFTTPFDVVKTRLQTQIPGSTSQYSSVYHALQEIGKREGLKGLYRGLIPRLVMYMSQGALFFASYEFFKGVFSLEVPHLSTLRIQHKQTEEDDVVSTESLFPSTSPAPPGASPSQPRLHHPYS
cccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHccccccccccccccccccccHHcccccccccccccccccccccccEEEEEccccccccccccccHHccccccEEEEEEcccccccccHHHHHHccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHccccccHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHcccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHEEEccHHHHHHHHHcccccccHHHHHHHHHHHHccccccccHHHHHccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccccccHHHHHHHHHHHHcccHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHccccccccccccccccccccccccccccccccccccccc
cccccccccccccccEEEEEcccccccccHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccEEEcccccccccccccccccccccccccccEEEEcccccEEEEcccccccccccccccccHccHHEEEEEEccccccccHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccHccccHcccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccEEEcccccccccEEEccHHHHHHHHHcccccccccHHHcccccccccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccccHHHHHHHHHHHccccHHHccccHHHHHHccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccHHHHHHHHHHHcccHHHHcccHHHHHHHccHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccHHEHccccHHHHHHcHHHHHHHHHHHHHHHHHccccccccccHEEEEHcHHcccHHHHccccHHHHHHHHHHHHccccccccc
mggykkqartsdqssikcrcnpvegasfeladfvsKEDALALAdnskqtnkkaepkspmiLSTAQLIAAVGQLWDSANRLaifhpkgnlidshsECKKEVLRNldkeenawvplstdskyfcvdvssagqfspmvqpnleFLKVTQkmsvfdscskkfaHSTFWTFLrsgaslsndtcvwglasagipyqlgnvhrwmtekfpagftyadsipdsekreageqcilgdttgcagasisgdtlspaskpatedhnksdlskskgqsscfnAKLMMSTRTTKSLLSDYFLKdvsdmkedcdvtrqpcsslcadycinsvassngtcekCRHLMDDDALlenkrnqsdknvvedenkmefhspktekphlslAKQEHAFAGALAGVFVSLCLHPVDTVKTVIQSCHTEQKSIVYIGRSIVSERGLTGLYRGIAsniassapiSAVYAFTYESvkgallphlpkefhslahctaggcasvatsfiftpseRIKQQMQVGSRYHNCWNALVGIIKNGGLHSLYAGwgavlcrnvphsIVKFYTYESLkqmmlpslkpgaqpntietlicggvagstaalfttpfdVVKTrlqtqipgstsqYSSVYHALQEIGKREGLKGLYRGLIPRLVMYMSQGALFFASYEFFKGvfslevphlstlriqhkqteeddvvsteslfpstspappgaspsqprlhhpys
mggykkqartsdqssikcrcNPVEGASFELADFVSKEDALALAdnskqtnkkaepkspMILSTAQLIAAVGQLWDSANRLAIFHPkgnlidshSECKKEVLRNLDKEENAWVPLSTDSKYFCVDVSSAGQFSPMVQPNLEFLKVTQKMSVFDSCSKKFAHSTFWTFLRSGASLSNDTCVWGLASAGIPYQLGNVHRWMTEKFPAGFTYADSIPDSEKREAGEQCILGDTTGCAGASISGDTLSPASKPATedhnksdlskskgqsscFNAKLMMSTRTTKSLLSDYFLKDVSDMKEDCDVTRQPCSSLCADYCINSVASSNGTCEKCRHLMDDDALlenkrnqsdknvvedenkMEFHSPKTEKPHLSLAKQEHAFAGALAGVFVSLCLHPVDTVKTVIQSChteqksivyigrSIVSERGLTGLYRGIASNIASSAPISAVYAFTYESVKGALLPHLPKEFHSLAHCTAGGCASVATSFIFTPSERIKQQMQVGSRYHNCWNALVGIIKNGGLHSLYAGWGAVLCRNVPHSIVKFYTYESLKQMMLPSLKPGAQPNTIETLICGGVAGSTAALFTTPFDVVKTRLQTqipgstsqysSVYHALQEIGKREGLKGLYRGLIPRLVMYMSQGALFFASYEFFKGVFSLEVPHLSTLRIQHKQTEEDDVVSTESLFPstspappgaspsqprlhhpys
MGGYKKQARTSDQSSIKCRCNPVEGASFELADFVSKEDALALADNSKQTNKKAEPKSPMILSTAQLIAAVGQLWDSANRLAIFHPKGNLIDSHSECKKEVLRNLDKEENAWVPLSTDSKYFCVDVSSAGQFSPMVQPNLEFLKVTQKMSVFDSCSKKFAHSTFWTFLRSGASLSNDTCVWGLASAGIPYQLGNVHRWMTEKFPAGFTYADSIPDSEKREAGEQCILGDTTGCAGASISGDTLSPASKPATEDHNKSDLSKSKGQSSCFNAKLMMSTRTTKSLLSDYFLKDVSDMKEDCDVTRQPCSSLCADYCINSVASSNGTCEKCRHLMDDDALLENKRNQSDKNVVEDENKMEFHSPKTEKPHLSLAKQEHAFAGALAGVFVSLCLHPVDTVKTVIQSCHTEQKSIVYIGRSIVSERGLTGLYRGiasniassapisaVYAFTYESVKGALLPHLPKEFHSLAHCTAGGCASVATSFIFTPSERIKQQMQVGSRYHNCWNALVGIIKNGGLHSLYAGWGAVLCRNVPHSIVKFYTYESLKQMMLPSLKPGAQPNTIETLICGGVAGSTAALFTTPFDVVKTRLQTQIPGSTSQYSSVYHALQEIGKREGLKGLYRGLIPRLVMYMSQGALFFASYEFFKGVFSLEVPHLSTLRIQHKQTEEDDVVSTESLFpstspappgaspsqpRLHHPYS
*******************C**V*GASFELADFV*************************ILSTAQLIAAVGQLWDSANRLAIFHPKGNLIDSHSECKKEVLRNLDKEENAWVPLSTDSKYFCVDVSSAGQFSPMVQPNLEFLKVTQKMSVFDSCSKKFAHSTFWTFLRSGASLSNDTCVWGLASAGIPYQLGNVHRWMTEKFPAGFTYADS************CILGDTTGC**********************************************TKSLLSDYFLKDVSDMKEDCDVTRQPCSSLCADYCINSVASSNGTCEKCRHLM******************************************HAFAGALAGVFVSLCLHPVDTVKTVIQSCHTEQKSIVYIGRSIVSERGLTGLYRGIASNIASSAPISAVYAFTYESVKGALLPHLPKEFHSLAHCTAGGCASVATSFIFTPSERIKQQMQVGSRYHNCWNALVGIIKNGGLHSLYAGWGAVLCRNVPHSIVKFYTYESLKQMMLPSLKPGAQPNTIETLICGGVAGSTAALFTTPFDVVKTRLQTQIPGSTSQYSSVYHALQEIGKREGLKGLYRGLIPRLVMYMSQGALFFASYEFFKGVFSLEVPHLSTLRI***************************************
*******************CNPVEGASFELADFVSK**************************TAQLIAAVGQLWDSANRLAIF***************EVLRNLDKEENAWVPLSTDSKY*******************EFLKVTQKMSVFDSCSKKFAHSTFWTFLRSGASLSNDTCVWGLASAGIPYQLGNVHRWMTEKFPAGFTYA*****SEKREAGEQCILGDTTGCAGASISGDTLSPASKPATEDHNK**********************TTKSLLSDYFLKDVSDMKEDCDVTRQPCSSLCADYCINSVASSNGTCEKCRHLMDDDALLENKRNQSDKNVVEDEN***************LAKQEHAFAGALAGVFVSLCLHPVDTVKTVIQSC*******VYIGRSIVSERGLTGLYRGIASNIASSAPISAVYAFTYESVKGALLPHLPKEFHSLAHCTAGGCASVATSFIFTPSERIKQQMQVGSRYHNCWNALVGIIKNGGLHSLYAGWGAVLCRNVPHSIVKFYTYESLKQMM**********NTIETLICGGVAGSTAALFTTPFDVVKTRLQT***********VYHALQEIGKREGLKGLYRGLIPRLVMYMSQGALFFASYEFFKGVFSLEV***************DDVVSTESLFPSTSPA****************
****************KCRCNPVEGASFELADFVSKEDALALAD************SPMILSTAQLIAAVGQLWDSANRLAIFHPKGNLIDSHSECKKEVLRNLDKEENAWVPLSTDSKYFCVDVSSAGQFSPMVQPNLEFLKVTQKMSVFDSCSKKFAHSTFWTFLRSGASLSNDTCVWGLASAGIPYQLGNVHRWMTEKFPAGFTYADSIPDSEKREAGEQCILGDTTGCAGASISGD************************SSCFNAKLMMSTRTTKSLLSDYFLKDVSDMKEDCDVTRQPCSSLCADYCINSVASSNGTCEKCRHLMDDDALLENKRNQSDKNVVEDENKMEFHSPKTEKPHLSLAKQEHAFAGALAGVFVSLCLHPVDTVKTVIQSCHTEQKSIVYIGRSIVSERGLTGLYRGIASNIASSAPISAVYAFTYESVKGALLPHLPKEFHSLAHCTAGGCASVATSFIFTPSERIKQQMQVGSRYHNCWNALVGIIKNGGLHSLYAGWGAVLCRNVPHSIVKFYTYESLKQMMLPSLKPGAQPNTIETLICGGVAGSTAALFTTPFDVVKTRLQTQIPGSTSQYSSVYHALQEIGKREGLKGLYRGLIPRLVMYMSQGALFFASYEFFKGVFSLEVPHLSTLRIQ**************************************
*************SSIKCRCNPVEGASFELA*F*SKEDALAL****************MILSTAQLIAAVGQLWDSANRLAIFHPKG**********KEVLRNLDKEENAWVPLSTDSKYFCVDVSSAGQFSPMVQPNLEFLKVTQKMSVFDSCSKKFAHSTFWTFLRSGASLSNDTCVWGLASAGIPYQLGNVHRWMTEKFPAGFTYADSIPDSEKREAGEQCILGDTTGCAGASISGDTLSPASKPATEDHNKSDLSKSKGQSSCFNAKLMMSTRTTKSLLSDYFLKDVSDMKEDCDVTRQPCSSLCADYCINSVASSNGTCEKCRHLMDDDALLENKRNQSDKNVVEDENKMEFHSPKTEKPHLSLAKQEHAFAGALAGVFVSLCLHPVDTVKTVIQSCHTEQKSIVYIGRSIVSERGLTGLYRGIASNIASSAPISAVYAFTYESVKGALLPHLPKEFHSLAHCTAGGCASVATSFIFTPSERIKQQMQVGSRYHNCWNALVGIIKNGGLHSLYAGWGAVLCRNVPHSIVKFYTYESLKQMMLPSLKPGAQPNTIETLICGGVAGSTAALFTTPFDVVKTRLQTQIPGSTSQYSSVYHALQEIGKREGLKGLYRGLIPRLVMYMSQGALFFASYEFFKGVFSLEVPHLSTLRIQHKQTEEDDVVSTESLFPSTSPAPPGASPSQP*******
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MGGYKKQARTSDQSSIKCRCNPVEGASFELADFVSKEDALALADNSKQTNKKAEPKSPMILSTAQLIAAVGQLWDSANRLAIFHPKGNLIDSHSECKKEVLRNLDKEENAWVPLSTDSKYFCVDVSSAGQFSPMVQPNLEFLKVTQKMSVFDSCSKKFAHSTFWTFLRSGASLSNDTCVWGLASAGIPYQLGNVHRWMTEKFPAGFTYADSIPDSEKREAGEQCILGDTTGCAGASISGDTLSPASKPATEDHNKSDLSKSKGQSSCFNAKLMMSTRTTKSLLSDYFLKDVSDMKEDCDVTRQPCSSLCADYCINSVASSNGTCEKCRHLMDDDALLENKRNQSDKNVVEDENKMEFHSPKTEKPHLSLAKQEHAFAGALAGVFVSLCLHPVDTVKTVIQSCHTEQKSIVYIGRSIVSERGLTGLYRGIASNIASSAPISAVYAFTYESVKGALLPHLPKEFHSLAHCTAGGCASVATSFIFTPSERIKQQMQVGSRYHNCWNALVGIIKNGGLHSLYAGWGAVLCRNVPHSIVKFYTYESLKQMMLPSLKPGAQPNTIETLICGGVAGSTAALFTTPFDVVKTRLQTQIPGSTSQYSSVYHALQEIGKREGLKGLYRGLIPRLVMYMSQGALFFASYEFFKGVFSLEVPHLSTLRIQHKQTEEDDVVSTESLFPSTSPAPPGASPSQPRLHHPYS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query696 2.2.26 [Sep-21-2011]
Q55DY8308 Mitoferrin OS=Dictyosteli yes no 0.389 0.879 0.342 2e-31
Q75AH6911 Mitochondrial aspartate-g yes no 0.373 0.285 0.333 5e-31
Q12482902 Mitochondrial aspartate-g yes no 0.442 0.341 0.295 5e-30
Q6GLA2269 S-adenosylmethionine mito yes no 0.357 0.925 0.352 8e-29
Q54MZ4434 Mitochondrial substrate c no no 0.395 0.633 0.280 1e-28
Q5U680274 S-adenosylmethionine mito yes no 0.357 0.908 0.326 1e-28
Q4V9P0267 S-adenosylmethionine mito yes no 0.356 0.928 0.306 2e-28
Q9FHX2412 Protein MITOFERRINLIKE 1, no no 0.385 0.650 0.336 4e-28
Q03829368 Uncharacterized mitochond no no 0.372 0.703 0.305 1e-27
P29518436 Adenine nucleotide transp N/A no 0.386 0.616 0.317 5e-27
>sp|Q55DY8|MFRN_DICDI Mitoferrin OS=Dictyostelium discoideum GN=mcfF PE=3 SV=1 Back     alignment and function desciption
 Score =  138 bits (347), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/289 (34%), Positives = 156/289 (53%), Gaps = 18/289 (6%)

Query: 374 HAFAGALAGVFVSLCLHPVDTVKTVIQSCH--TEQKSIVYIGRSIVSERGLTGLYRGIAS 431
           H  AGA AG      ++P+DT+KT IQ+      Q S + I + I+ + G+TGL+RG+ +
Sbjct: 19  HLIAGAAAGFAEHCGMYPIDTIKTHIQAIKPGAMQTSSLQITKHIIQQHGITGLFRGLTA 78

Query: 432 NIASSAPISAVYAFTYESVKGALLPHLPKEFHSLAHCTAGGCASVATSFIFTPSERIKQQ 491
             A +AP  AV+   YE +K   +    ++ H +    AG  A++ +  + +P + +KQ+
Sbjct: 79  VAAGAAPSHAVHFSIYELLKFKFIGS-DEDHHPIKVGIAGAIATMTSEAVASPMDVVKQR 137

Query: 492 MQVG-SRYHNCWNALVGIIKNGGLHSLYAGWGAVLCRNVPHSIVKFYTYESLKQMMLPSL 550
           +Q+  + Y    +    I    G+   Y+G+   L  NVP++IV F +YESLK+++ P  
Sbjct: 138 LQLQITDYKGLTDCTKRIWVKEGIRGFYSGYTTTLVMNVPYNIVYFASYESLKKIIQPWF 197

Query: 551 K---PGAQP-NTIETLICGGVAGSTAALFTTPFDVVKTRLQTQ---IPGST-------SQ 596
               P  +    I+ L+ GG AG  AA FT PFDVVKTRLQTQ   I  ST        +
Sbjct: 198 NNKNPEERSYQLIDHLVAGGGAGMLAAAFTNPFDVVKTRLQTQSDFIASSTINSAKSIKR 257

Query: 597 YSSVYHALQEIGKREGLKGLYRGLIPRLVMYMSQGALFFASYEFFKGVF 645
           Y  +  A++ I   EG+ G  RG+ PR+V +    A+ ++ YE+FK + 
Sbjct: 258 YGGMMDAMKTIWIEEGMDGYLRGMKPRMVFHSMSSAIVWSVYEYFKFIL 306
Mitochondrial solute carriers shuttle metabolites, nucleotides, and cofactors through the mitochondrial inner membrane. Mitochondrial iron transporter that mediates iron uptake. Probably required for heme synthesis of hemoproteins and Fe-S cluster assembly.
Dictyostelium discoideum (taxid: 44689)
>sp|Q75AH6|AGC1_ASHGO Mitochondrial aspartate-glutamate transporter AGC1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=AGC1 PE=3 SV=2 Back     alignment and function description
>sp|Q12482|AGC1_YEAST Mitochondrial aspartate-glutamate transporter AGC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AGC1 PE=1 SV=1 Back     alignment and function description
>sp|Q6GLA2|SAMC_XENTR S-adenosylmethionine mitochondrial carrier protein OS=Xenopus tropicalis GN=slc25a26 PE=2 SV=1 Back     alignment and function description
>sp|Q54MZ4|MCFB_DICDI Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1 Back     alignment and function description
>sp|Q5U680|SAMC_MOUSE S-adenosylmethionine mitochondrial carrier protein OS=Mus musculus GN=Slc25a26 PE=2 SV=2 Back     alignment and function description
>sp|Q4V9P0|SAMC_DANRE S-adenosylmethionine mitochondrial carrier protein OS=Danio rerio GN=slc25a26 PE=2 SV=1 Back     alignment and function description
>sp|Q9FHX2|MFL1_ARATH Protein MITOFERRINLIKE 1, chloroplastic OS=Arabidopsis thaliana GN=MFL1 PE=2 SV=1 Back     alignment and function description
>sp|Q03829|YM39_YEAST Uncharacterized mitochondrial carrier YMR166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMR166C PE=1 SV=1 Back     alignment and function description
>sp|P29518|BT1_MAIZE Adenine nucleotide transporter BT1, chloroplastic/amyloplastic/mitochondrial OS=Zea mays GN=BT1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query696
359474009703 PREDICTED: uncharacterized protein LOC10 0.929 0.920 0.564 0.0
297742520615 unnamed protein product [Vitis vinifera] 0.875 0.990 0.579 0.0
255537479663 mitochondrial carrier protein, putative 0.926 0.972 0.534 1e-176
224074933620 predicted protein [Populus trichocarpa] 0.862 0.967 0.494 1e-169
356527632650 PREDICTED: uncharacterized protein LOC10 0.910 0.975 0.530 1e-169
356511492643 PREDICTED: uncharacterized protein LOC10 0.905 0.979 0.517 1e-166
449452466676 PREDICTED: uncharacterized protein LOC10 0.922 0.949 0.500 1e-161
357520431597 Mitochondrial substrate carrier family p 0.775 0.904 0.497 1e-145
145340110628 Mitochondrial substrate carrier family p 0.834 0.925 0.449 1e-135
297809407616 binding protein [Arabidopsis lyrata subs 0.836 0.944 0.445 1e-131
>gi|359474009|ref|XP_003631388.1| PREDICTED: uncharacterized protein LOC100853340 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  699 bits (1805), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/670 (56%), Positives = 457/670 (68%), Gaps = 23/670 (3%)

Query: 1   MGGYKKQARTSDQSSIKCRCNPVEGASFELADFVSKEDALALADNSKQTNKKAEPKSPMI 60
           MG   KQ +  DQ S   R   ++ ASFE   FV ++    L DN  +  K  E KS  I
Sbjct: 1   MGFCSKQPK-RDQPSTNYRYKSLKQASFE---FVHEDYGGTLPDNDNRRAKVMESKSCEI 56

Query: 61  LSTAQLIAAVGQLWDSANR-LAIFHPKGNLIDSHSECKKE-VLRNLDKEENAWVPLSTDS 118
           LSTA+LI+AVGQ+WD A+R L+IF PK N   + ++  KE VL  L  E    VP S +S
Sbjct: 57  LSTAELISAVGQIWDCASRPLSIFQPKANSKHNDTDSNKEKVLCYLGGEGYVRVPTSANS 116

Query: 119 KYFCVDVSSAGQFSPMVQPNLEFLKVTQKMSVFDSCSKKFAHSTFWTFLRSGASLSNDTC 178
           KYFC+D+ +A  FSPMVQPN+E L +TQKMS+F+  +   AHS F   LR GA++ N+T 
Sbjct: 117 KYFCIDLKTASLFSPMVQPNIEHLNITQKMSLFEPGNGNNAHSFFLRCLRGGANMPNET- 175

Query: 179 VW---GLASAGIPYQLGNVHRWMTEKFPAGFTYADSIPDSEKREAGEQCILGDTTGCAGA 235
            W   GL + GI Y LGN++RWM++           I   E  +  E CI  D T  AG 
Sbjct: 176 -WKEMGLTNVGISYDLGNIYRWMSKITLDTLRSPVDITQIENMKTKECCISKDATNTAGC 234

Query: 236 SISGDTLSPASKPATEDHNKSDLSKSKGQSSCFNAKLMMSTRTTKSLLSDYFLKDVSDMK 295
            I+ D   PA+ PATE    +D      + +  N ++M    +  SL +DYFL     + 
Sbjct: 235 GINIDVAIPANHPATES---ADCYTGVTEGNGANERVMNIGVSISSLCTDYFLGADHGIA 291

Query: 296 EDCDVTRQPCSSLCADYCINSVASSNGTCEKCRHLMDDDALLENKRNQSDKNVVEDENKM 355
               ++R P S L AD   N ++S++   E+C+H  +         ++  + V +D+ KM
Sbjct: 292 AGDSISRTPSSELHADS--NFLSSTDFAFEECQHKTEG-------VDRQKEFVTKDKLKM 342

Query: 356 EFHSPKTEKPHLSLAKQEHAFAGALAGVFVSLCLHPVDTVKTVIQSCHTEQKSIVYIGRS 415
           E    K +K H  LAKQEHAFAGA AGVFVSLCLHPVDT+KTVIQSC  +QKSI  +GR 
Sbjct: 343 ETCPSKQDKHHYVLAKQEHAFAGAFAGVFVSLCLHPVDTIKTVIQSCQADQKSIFSVGRL 402

Query: 416 IVSERGLTGLYRGIASNIASSAPISAVYAFTYESVKGALLPHLPKEFHSLAHCTAGGCAS 475
           I+S+RGL G YRGI SNIASSAPISAVY FTYESVKGALLP  PKE HS+AHC AGGCAS
Sbjct: 403 IISQRGLAGFYRGITSNIASSAPISAVYTFTYESVKGALLPLFPKECHSIAHCMAGGCAS 462

Query: 476 VATSFIFTPSERIKQQMQVGSRYHNCWNALVGIIKNGGLHSLYAGWGAVLCRNVPHSIVK 535
           +ATSFIFTPSE IKQQMQ+GS Y NCWNALVGIIK GGL SLYAGWGAVLCRNVPHSI+K
Sbjct: 463 IATSFIFTPSEHIKQQMQIGSHYQNCWNALVGIIKKGGLPSLYAGWGAVLCRNVPHSIIK 522

Query: 536 FYTYESLKQMMLPSLKPGAQPNTIETLICGGVAGSTAALFTTPFDVVKTRLQTQIPGSTS 595
           FYTYESLKQ+MLPSL+P A+PNT++TL CGG+AGSTAA FTTPFDVVKTRLQTQIPGS  
Sbjct: 523 FYTYESLKQLMLPSLQPNAKPNTLQTLACGGLAGSTAAFFTTPFDVVKTRLQTQIPGSMK 582

Query: 596 QYSSVYHALQEIGKREGLKGLYRGLIPRLVMYMSQGALFFASYEFFKGVFSLEVPHLSTL 655
           QY+SV+H LQEI K EGL+GLYRGL PRLVMY+SQGALFFASYEFFK +F LE+P L   
Sbjct: 583 QYNSVFHTLQEISKHEGLRGLYRGLTPRLVMYVSQGALFFASYEFFKSLFCLEMPKLHAQ 642

Query: 656 RIQHKQTEED 665
            I HKQ  E+
Sbjct: 643 TIPHKQYMEE 652

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297742520|emb|CBI34669.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255537479|ref|XP_002509806.1| mitochondrial carrier protein, putative [Ricinus communis] gi|223549705|gb|EEF51193.1| mitochondrial carrier protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224074933|ref|XP_002304496.1| predicted protein [Populus trichocarpa] gi|222841928|gb|EEE79475.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356527632|ref|XP_003532412.1| PREDICTED: uncharacterized protein LOC100812271 [Glycine max] Back     alignment and taxonomy information
>gi|356511492|ref|XP_003524460.1| PREDICTED: uncharacterized protein LOC100778143 [Glycine max] Back     alignment and taxonomy information
>gi|449452466|ref|XP_004143980.1| PREDICTED: uncharacterized protein LOC101216245 [Cucumis sativus] gi|449531539|ref|XP_004172743.1| PREDICTED: uncharacterized LOC101216245 [Cucumis sativus] Back     alignment and taxonomy information
>gi|357520431|ref|XP_003630504.1| Mitochondrial substrate carrier family protein P [Medicago truncatula] gi|355524526|gb|AET04980.1| Mitochondrial substrate carrier family protein P [Medicago truncatula] Back     alignment and taxonomy information
>gi|145340110|ref|NP_192883.2| Mitochondrial substrate carrier family protein [Arabidopsis thaliana] gi|332657612|gb|AEE83012.1| Mitochondrial substrate carrier family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297809407|ref|XP_002872587.1| binding protein [Arabidopsis lyrata subsp. lyrata] gi|297318424|gb|EFH48846.1| binding protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query696
TAIR|locus:2123096628 AT4G11440 [Arabidopsis thalian 0.724 0.802 0.495 4e-121
DICTYBASE|DDB_G0269470308 mcfF "putative mitoferrin" [Di 0.383 0.866 0.337 6.4e-34
TAIR|locus:2007387326 AT1G07030 [Arabidopsis thalian 0.405 0.865 0.312 8e-33
TAIR|locus:2060811331 AT2G30160 [Arabidopsis thalian 0.383 0.806 0.332 4.7e-32
TAIR|locus:505006167345 SAMC2 "S-adenosylmethionine ca 0.420 0.849 0.315 2e-30
UNIPROTKB|E1C4L1267 SLC25A26 "Uncharacterized prot 0.357 0.932 0.338 2.6e-30
TAIR|locus:2122452325 SAMC1 "S-adenosylmethionine ca 0.403 0.864 0.323 1.2e-29
TAIR|locus:2165755412 Mfl1 "MitoFerrinLike1" [Arabid 0.403 0.682 0.336 2.5e-29
MGI|MGI:1914832274 Slc25a26 "solute carrier famil 0.370 0.941 0.315 3.2e-29
UNIPROTKB|Q6GLA2269 slc25a26 "S-adenosylmethionine 0.356 0.921 0.338 4.1e-29
TAIR|locus:2123096 AT4G11440 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1150 (409.9 bits), Expect = 4.0e-121, Sum P(2) = 4.0e-121
 Identities = 266/537 (49%), Positives = 333/537 (62%)

Query:   130 QFSPMVQPNLEFLKVTQKMSVFDSCSKKFAHSTFWTFLRSGASLSNDTCVWGLASAGIPY 189
             Q S   Q  +  L V +KM  FD  ++K         L +    S   C       G P+
Sbjct:   101 QLSSTPQSRVRLLGVAEKMYSFDPYNRKS--------LLNQTDGSKSIC-GSCKGIGFPF 151

Query:   190 QLG--NVHRWMTEKFPAGFTYADSIPDSEKREAGEQCILGDTTGCAG-ASISGDTLSPAS 246
             +     ++ WM    P+   Y +   + EKRE  E CIL   +     AS +GD      
Sbjct:   152 EARWKTLYSWMEGVLPSSTRYHEEGAEIEKRENFEGCILNPVSSKEELASRNGDGCDCVF 211

Query:   247 KPATEDHNKSDLSKSKGQSSCFNAKLMMSTRTTKSLLSDY-FL--KDVSDMKEDCDVTRQ 303
               A    ++S + + +       A+ ++ TR ++S   +Y FL  KD     +  ++   
Sbjct:   212 D-AIGAKDQSTVIEPRSLLLATVAESVVDTRVSRSNDVNYLFLLYKDRCVNNKGVNMISS 270

Query:   304 PCSSLCADYCINSVASSNGTCEKCRHLMDDDALLENKRNQSDKNVVEDENKMEFHSPKTE 363
              CS+ C D  ++S  S N   E C  ++++  LLE  RN  DK     E ++   SP+T 
Sbjct:   271 KCSTDC-DAEVSS--SGNNLDEDCLSIVENKQLLEKDRN--DK-----ETEVCLSSPETT 320

Query:   364 KPHLSLAKQEHAFAGALAGVFVSLCLHPVDTVKTVIQSCHTEQKSIVYIGRSIVSERGLT 423
                 + AKQ HAFAGALAG+ VSLCLHP+DTVKT+IQSC  E+KS+   GRSI+SERG +
Sbjct:   321 T--YAFAKQRHAFAGALAGISVSLCLHPLDTVKTMIQSCRLEEKSLCNTGRSIISERGFS 378

Query:   424 GLYRGXXXXXXXXXXXXXVYAFTYESVKGALLPHLPKEFHSLAHCTAGGCASVATSFIFT 483
             GLYRG             +Y FTYE+VKG LLP  PKE+ SLAHC AGG AS+ATSFIFT
Sbjct:   379 GLYRGIASNIASSAPISALYTFTYETVKGTLLPLFPKEYCSLAHCLAGGSASIATSFIFT 438

Query:   484 PSERIKQQMQVGSRYHNCWNALVGIIKNGGLHSLYAGWGAVLCRNVPHSIVKFYTYESLK 543
             PSERIKQQMQV S Y NCW ALVGII+ GGL SLYAGW AVLCRN+PHSI+KFY YE++K
Sbjct:   439 PSERIKQQMQVSSHYRNCWTALVGIIQKGGLLSLYAGWTAVLCRNIPHSIIKFYVYENMK 498

Query:   544 QMMLPSLKP-G--AQPNTIETLICGGVAGSTAALFTTPFDVVKTRLQTQIPGSTSQYSSV 600
             QM+LPS  P G  AQP T++TL CGG+AGS AA FTTPFDVVKTRLQTQIPGS +Q+ SV
Sbjct:   499 QMVLPSPGPCGEMAQPTTLQTLTCGGLAGSAAAFFTTPFDVVKTRLQTQIPGSRNQHPSV 558

Query:   601 YHALQEIGKREGLKGLYRGLIPRLVMYMSQGALFFASYEFFKGVFSLEV--PHLSTL 655
             Y  LQ I ++EGL+GLYRGLIPRLVMYMSQGA+FFASYEF+K V SL    P+ S L
Sbjct:   559 YQTLQSIRRQEGLRGLYRGLIPRLVMYMSQGAIFFASYEFYKSVLSLAAAQPNTSAL 615
GO:0005739 "mitochondrion" evidence=ISM
GO:0005743 "mitochondrial inner membrane" evidence=ISS
GO:0006810 "transport" evidence=ISS
GO:0006839 "mitochondrial transport" evidence=ISS
DICTYBASE|DDB_G0269470 mcfF "putative mitoferrin" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TAIR|locus:2007387 AT1G07030 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2060811 AT2G30160 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006167 SAMC2 "S-adenosylmethionine carrier 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|E1C4L1 SLC25A26 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
TAIR|locus:2122452 SAMC1 "S-adenosylmethionine carrier 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165755 Mfl1 "MitoFerrinLike1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
MGI|MGI:1914832 Slc25a26 "solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q6GLA2 slc25a26 "S-adenosylmethionine mitochondrial carrier protein" [Xenopus (Silurana) tropicalis (taxid:8364)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pg.C_LG_III1045
hypothetical protein (620 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query696
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 1e-29
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 2e-22
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 6e-19
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 9e-18
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 1e-09
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 1e-06
PTZ00169 300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 3e-05
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information 
 Score =  112 bits (282), Expect = 1e-29
 Identities = 35/92 (38%), Positives = 56/92 (60%)

Query: 555 QPNTIETLICGGVAGSTAALFTTPFDVVKTRLQTQIPGSTSQYSSVYHALQEIGKREGLK 614
             + + +L+ GG+AG+ AA  T P DVVKTRLQ+   G + +Y  +    ++I K EG++
Sbjct: 2   PLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIR 61

Query: 615 GLYRGLIPRLVMYMSQGALFFASYEFFKGVFS 646
           GLY+GL+P L+      A++F +YE  K +  
Sbjct: 62  GLYKGLLPNLLRVAPAAAIYFGTYETLKKLLL 93

Length = 96
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 696
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 100.0
KOG0750304 consensus Mitochondrial solute carrier protein [En 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.97
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 99.97
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 99.97
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 99.96
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.96
KOG0036463 consensus Predicted mitochondrial carrier protein 99.96
KOG0766297 consensus Predicted mitochondrial carrier protein 99.95
KOG0765333 consensus Predicted mitochondrial carrier protein 99.95
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.95
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.95
KOG0770353 consensus Predicted mitochondrial carrier protein 99.94
KOG0769308 consensus Predicted mitochondrial carrier protein 99.91
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.91
KOG0767333 consensus Mitochondrial phosphate carrier protein 99.91
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.9
KOG1519297 consensus Predicted mitochondrial carrier protein 99.81
KOG2745321 consensus Mitochondrial carrier protein [General f 99.72
KOG1519297 consensus Predicted mitochondrial carrier protein 99.69
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.65
KOG2954427 consensus Mitochondrial carrier protein [General f 99.64
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.51
KOG2745321 consensus Mitochondrial carrier protein [General f 99.4
KOG2954427 consensus Mitochondrial carrier protein [General f 97.86
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information 
Probab=100.00  E-value=2e-52  Score=439.59  Aligned_cols=278  Identities=28%  Similarity=0.478  Sum_probs=250.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCC-----CCCCcHHHHHHHHHhhcCccccccCcHHHHHhhhhhhhhhh
Q 005451          370 AKQEHAFAGALAGVFVSLCLHPVDTVKTVIQSCH-----TEQKSIVYIGRSIVSERGLTGLYRGIASNIASSAPISAVYA  444 (696)
Q Consensus       370 ~~~~~~lAG~vAG~is~li~~PlD~IKtRlQ~~~-----~~~~s~~~~ik~I~r~eG~rGLYRGl~~tllr~vp~sai~f  444 (696)
                      ...+.++||++||+++.+++.|||+||+|+|++.     ..+.++++.+++|+++||++|||||..+++++.+|+.++.|
T Consensus        26 ~~~~~llAGgvAGavsrt~~APLd~iKIlfQ~~~~~~~~~k~~g~~~~~~~I~~eEG~~g~wkGn~~~~~r~~pY~avqf  105 (320)
T KOG0752|consen   26 TGAKSLLAGGVAGAVSRTVTAPLDRIKILFQVQVEPSKTSKYPGVIQAFKSIYREEGLRGFWKGNGPAQIRIIPYGAVQF  105 (320)
T ss_pred             HHHHHHhcchHHHHHHHHhcCchhHceEEEEeccccccccccccHHHHHHHHHHHhchhhhhcCcccceeeeeecchhhh
Confidence            6678899999999999999999999999999985     45778999999999999999999999999999999999999


Q ss_pred             hhhHhhhcccCCCCCC-ccchHHHHHHHHHHHHhhhhhcchhhhhhhhhhcccC---CCCHHHHHHHHHHcCCccccccc
Q 005451          445 FTYESVKGALLPHLPK-EFHSLAHCTAGGCASVATSFIFTPSERIKQQMQVGSR---YHNCWNALVGIIKNGGLHSLYAG  520 (696)
Q Consensus       445 ~~Ye~lK~~l~~~~~~-~~~~~~~~laG~lAg~va~~vt~PlDvIKtRlQ~~~~---y~~~~~~l~~I~r~eGirgLYrG  520 (696)
                      ..||.+|+........ ..+...+++||++||+++.++++|||++|||+-++.+   |.++++++++|+++||++|||||
T Consensus       106 ~aye~~k~~~~~~~~~~~~~~~~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~~~~y~~l~~a~~~I~~~eGi~gfYrG  185 (320)
T KOG0752|consen  106 SAYEQYKKLVLGVDPNGSLSPLVRLVAGALAGMTATLATYPLDLLRTRLAVQGELKVYRGLLHAFKTIYREEGIRGFYRG  185 (320)
T ss_pred             hHHHHhhhhhhccCcccccchhHHHHHHHHHHHHHHHhcCcHHHhhhheeeecccccCCcHHHHHHHHHHhcchhhhhcC
Confidence            9999999753332222 5677899999999999999999999999999988875   99999999999999999999999


Q ss_pred             cccccccccccchhhHhhHHHHHHhhcCCCCCCCCCChhHHHHHHHHHhhhhhhhcccHHHHHHHHHhcCC---CCCCCC
Q 005451          521 WGAVLCRNVPHSIVKFYTYESLKQMMLPSLKPGAQPNTIETLICGGVAGSTAALFTTPFDVVKTRLQTQIP---GSTSQY  597 (696)
Q Consensus       521 ~~p~llr~~p~~ai~f~~YE~lk~~l~~~~~~~~~~~~~~~~laG~lAG~~a~~it~PlDvVKTRlQ~q~~---~~~~~y  597 (696)
                      +.|++++.+|+.++.|.+||.+|++...........+.+..+++|++||+++.+++||||+||+|||+...   +...+|
T Consensus       186 l~ptllgi~Pyag~~F~~Yd~lk~~~~~~~~~~~~~~~~~~l~~GalAG~~aqti~yPlD~vRrrmQ~~~~~~~~~~~~~  265 (320)
T KOG0752|consen  186 LGPTLLGIAPYAGINFFAYDTLKKWQYLKSSGNKELSNFERLLCGALAGAVAQTITYPLDTVRRRMQLGGLKYFGGGFRY  265 (320)
T ss_pred             cchhhheehhhhhhHHHHHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHhhhcccHHHHHHHHhccCcccccccccc
Confidence            99999999999999999999999952222222245567889999999999999999999999999999853   345567


Q ss_pred             CcHHHHHHHHHHhhCcccccccHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 005451          598 SSVYHALQEIGKREGLKGLYRGLIPRLVMYMSQGALFFASYEFFKGVFSL  647 (696)
Q Consensus       598 ~gv~~~~r~I~r~EGi~GLYRGl~~~llr~vp~~al~f~~YE~lk~~l~~  647 (696)
                      .++++|+++|+++||+.|||||+.|++++.+|..++.|.+||.+|.++..
T Consensus       266 ~~~~~~~~~i~~~EG~~gLYkGl~p~~lK~~P~~ai~F~~Ye~~k~~l~~  315 (320)
T KOG0752|consen  266 KGVLDAFRQIVKTEGVKGLYKGLSPNLLKVVPSVAISFTTYEILKDLLRL  315 (320)
T ss_pred             ccHHHHHHHHHHHhhhhhhhccccHHHHHhcccceeeeehHHHHHHHhhc
Confidence            89999999999999999999999999999999999999999999988763

>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query696
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 7e-10
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 8e-08
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure 
Iteration: 1

 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 19/196 (9%)
Query: 465 LAHCTAGGCASVATSFIFTPSERIKQQMQVG---------SRYHNCWNALVGIIKNGGLH 515
           L    AGG A+  +     P ER+K  +QV           +Y    + +V I K  G  
Sbjct: 8   LKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFL 67
Query: 516 SLYAGWGAVLCRNVPHSIVKFYTYESLKQMMLPSLKPGAQ--PNTIETLICGGVAGSTAA 573
           S + G  A + R  P   + F   +  KQ+ L  +    Q        L  GG AG+T+ 
Sbjct: 68  SFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSL 127
Query: 574 LFTTPFDVVKTRLQTQIPGSTSQ--YSSVYHALQEIGKREGLKGLYRGL---IPRLVMYM 628
            F  P D  +TRL   +    +Q  ++ + + + +I K +GL+GLY+G    +  +++Y 
Sbjct: 128 CFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYR 187
Query: 629 SQGALFFASYEFFKGV 644
              A +F  Y+  KG+
Sbjct: 188 ---AAYFGVYDTAKGM 200
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query696
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-56
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-38
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 8e-28
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-20
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 3e-54
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 3e-29
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 2e-21
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 3e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-04
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  193 bits (493), Expect = 1e-56
 Identities = 65/289 (22%), Positives = 111/289 (38%), Gaps = 28/289 (9%)

Query: 376 FAGALAGVFVSLCLHPVDTVKTVIQ--------SCHTEQKSIVYIGRSIVSERGLTGLYR 427
            AG +A       + P++ VK ++Q        S   + K I+     I  E+G    +R
Sbjct: 12  LAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWR 71

Query: 428 GIASNIASSAPISAVYAFTYESVKGALLPHLPK----EFHSLAHCTAGGCASVATSFIFT 483
           G  +N+    P  A+     +  K   L  + +      +   +  +GG A  ATS  F 
Sbjct: 72  GNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAA-GATSLCFV 130

Query: 484 -PSE--RIKQQMQVGS-----RYHNCWNALVGIIKNGGLHSLYAGWGAVLCRNVPHSIVK 535
            P +  R +    VG       +    N +  I K+ GL  LY G+   +   + +    
Sbjct: 131 YPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAY 190

Query: 536 FYTYESLKQMMLPSLKPGAQPNTIETLICGGVAGSTAALFTTPFDVVKTRLQTQ--IPGS 593
           F  Y++ K M+          + I + +      + A L + PFD V+ R+  Q    G+
Sbjct: 191 FGVYDTAKGMLPDPK----NVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGA 246

Query: 594 TSQYSSVYHALQEIGKREGLKGLYRGLIPRLVMYMSQGALFFASYEFFK 642
              Y+      ++I K EG K  ++G     V+    GA     Y+  K
Sbjct: 247 DIMYTGTVDCWRKIAKDEGPKAFFKGAWSN-VLRGMGGAFVLVLYDEIK 294
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query696
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=6.9e-51  Score=430.80  Aligned_cols=267  Identities=22%  Similarity=0.319  Sum_probs=245.5

Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHhcCCC-----------CCCcHHHHHHHHHhhcCccccccCcHHHHHhhhhhhhh
Q 005451          374 HAFAGALAGVFVSLCLHPVDTVKTVIQSCHT-----------EQKSIVYIGRSIVSERGLTGLYRGIASNIASSAPISAV  442 (696)
Q Consensus       374 ~~lAG~vAG~is~li~~PlD~IKtRlQ~~~~-----------~~~s~~~~ik~I~r~eG~rGLYRGl~~tllr~vp~sai  442 (696)
                      +++||++||+++.++++|||+||+|+|++..           .++++++++++|+++||++|||||+.+++++.+|..++
T Consensus         4 ~~~aG~~ag~~~~~~~~Pld~iKtrlQ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i   83 (303)
T 2lck_A            4 KFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASV   83 (303)
T ss_dssp             HHHHHHHHHHHHHHTTHHHHHHHHHSSCCTTCCSHHHHCSCSSCSCHHHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHHH
T ss_pred             hHHhHHHHHHHHHHHcCcHHHHHHHHHhhhccccccccccCCCCCCHHHHHHHHHHhhCHHHHHcCCHHHHHHHHHHHHH
Confidence            6899999999999999999999999998753           47899999999999999999999999999999999999


Q ss_pred             hhhhhHhhhcccCCCCCCccchHHHHHHHHHHHHhhhhhcchhhhhhhhhhccc------CCCCHHHHHHHHHHcCCccc
Q 005451          443 YAFTYESVKGALLPHLPKEFHSLAHCTAGGCASVATSFIFTPSERIKQQMQVGS------RYHNCWNALVGIIKNGGLHS  516 (696)
Q Consensus       443 ~f~~Ye~lK~~l~~~~~~~~~~~~~~laG~lAg~va~~vt~PlDvIKtRlQ~~~------~y~~~~~~l~~I~r~eGirg  516 (696)
                      +|.+||.+|+.+.+... .......+++|++||+++.++++|+|+||+|+|++.      .|.++++++++|+++||++|
T Consensus        84 ~f~~ye~~k~~~~~~~~-~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~i~~~eG~~g  162 (303)
T 2lck_A           84 RIGLYDSVKQFYTKGSE-HAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRG  162 (303)
T ss_dssp             TTTHHHHHHHHHSCCCS-SCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCCSSSCCCHHHHHHHHHHHHCHHH
T ss_pred             HHHHHHHHHHHHhcCCc-CCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCCCCCCCCHHHHHHHHHHhcChhh
Confidence            99999999998865422 356678999999999999999999999999999875      58999999999999999999


Q ss_pred             cccccccccccccccchhhHhhHHHHHHhhcCCCCCCCCCChhHHHHHHHHHhhhhhhhcccHHHHHHHHHhcCCCCCCC
Q 005451          517 LYAGWGAVLCRNVPHSIVKFYTYESLKQMMLPSLKPGAQPNTIETLICGGVAGSTAALFTTPFDVVKTRLQTQIPGSTSQ  596 (696)
Q Consensus       517 LYrG~~p~llr~~p~~ai~f~~YE~lk~~l~~~~~~~~~~~~~~~~laG~lAG~~a~~it~PlDvVKTRlQ~q~~~~~~~  596 (696)
                      ||||+.|+++|.+|+.+++|.+||.+|+.+.+..  .........+++|++||++++++++|+||||+|||++.   ...
T Consensus       163 lyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~--~~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~---~~~  237 (303)
T 2lck_A          163 LWKGTSPNVARNAIVNCAELVTYDLIKDTLLKAN--LMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSA---LGQ  237 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTT--SCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC---SSS
T ss_pred             hhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhcc---ccc
Confidence            9999999999999999999999999999987542  12345678899999999999999999999999999973   346


Q ss_pred             CCcHHHHHHHHHHhhCcccccccHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 005451          597 YSSVYHALQEIGKREGLKGLYRGLIPRLVMYMSQGALFFASYEFFKGVFS  646 (696)
Q Consensus       597 y~gv~~~~r~I~r~EGi~GLYRGl~~~llr~vp~~al~f~~YE~lk~~l~  646 (696)
                      |.++++|+++|+++||++|||||+.++++|.+|..+++|.+||.+|+.+.
T Consensus       238 y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~k~~l~  287 (303)
T 2lck_A          238 YHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALM  287 (303)
T ss_dssp             CCSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998875
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 696
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 7e-31
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 3e-15
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 1e-11
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

 Score =  120 bits (301), Expect = 7e-31
 Identities = 60/294 (20%), Positives = 110/294 (37%), Gaps = 28/294 (9%)

Query: 367 LSLAKQEHAFAGALAGVFVSLCLHPVDTVKTVIQ--------SCHTEQKSIVYIGRSIVS 418
           LS  K     AG +A       + P++ VK ++Q        S   + K I+     I  
Sbjct: 4   LSFLK--DFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPK 61

Query: 419 ERGLTGLYRGIASNIASSAPISAVYAFTYESVKGALLPHLPKE----FHSLAHCTAGGCA 474
           E+G    +RG  +N+    P  A+     +  K   L  + +      +   +  +GG A
Sbjct: 62  EQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAA 121

Query: 475 SVATSFIFTPSERIKQQMQV-------GSRYHNCWNALVGIIKNGGLHSLYAGWGAVLCR 527
              +     P +  + ++            +    N +  I K+ GL  LY G+   +  
Sbjct: 122 GATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQG 181

Query: 528 NVPHSIVKFYTYESLKQMMLPSLKPGAQPNTIETLICGGVAGSTAALFTTPFDVVKTRLQ 587
            + +    F  Y++ K M+          + I + +      + A L + PFD V+ R+ 
Sbjct: 182 IIIYRAAYFGVYDTAKGML----PDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMM 237

Query: 588 TQ--IPGSTSQYSSVYHALQEIGKREGLKGLYRGLIPRLVMYMSQGALFFASYE 639
            Q    G+   Y+      ++I K EG K  ++G    ++  M  GA     Y+
Sbjct: 238 MQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYD 290
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query696
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

Probab=100.00  E-value=1e-45  Score=383.84  Aligned_cols=269  Identities=21%  Similarity=0.335  Sum_probs=240.4

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCC--------CCCCcHHHHHHHHHhhcCccccccCcHHHHHhhhhh
Q 005451          368 SLAKQEHAFAGALAGVFVSLCLHPVDTVKTVIQSCH--------TEQKSIVYIGRSIVSERGLTGLYRGIASNIASSAPI  439 (696)
Q Consensus       368 ~l~~~~~~lAG~vAG~is~li~~PlD~IKtRlQ~~~--------~~~~s~~~~ik~I~r~eG~rGLYRGl~~tllr~vp~  439 (696)
                      +++..+.++||++||+++.+++||||+||||+|++.        ..++++++++++++++||+++||||+.+.+++.++.
T Consensus         3 ~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~   82 (292)
T d1okca_           3 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPT   82 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhcc
Confidence            457889999999999999999999999999999853        246799999999999999999999999999999999


Q ss_pred             hhhhhhhhHhhhcccCCCCCCc----cchHHHHHHHHHHHHhhhhhcchhhhhhhhhhccc-------CCCCHHHHHHHH
Q 005451          440 SAVYAFTYESVKGALLPHLPKE----FHSLAHCTAGGCASVATSFIFTPSERIKQQMQVGS-------RYHNCWNALVGI  508 (696)
Q Consensus       440 sai~f~~Ye~lK~~l~~~~~~~----~~~~~~~laG~lAg~va~~vt~PlDvIKtRlQ~~~-------~y~~~~~~l~~I  508 (696)
                      .+++|.+|+.+++.+.......    ......+++|++|++++.++++|+|++|+|+|.+.       .+.+.+++++.+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~~~~~  162 (292)
T d1okca_          83 QALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKI  162 (292)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHH
T ss_pred             cchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccccccccccHHHHHHHh
Confidence            9999999999998876553332    23456788999999999999999999999999863       577899999999


Q ss_pred             HHcCCccccccccccccccccccchhhHhhHHHHHHhhcCCCCCCCCCChhHHHHHHHHHhhhhhhhcccHHHHHHHHHh
Q 005451          509 IKNGGLHSLYAGWGAVLCRNVPHSIVKFYTYESLKQMMLPSLKPGAQPNTIETLICGGVAGSTAALFTTPFDVVKTRLQT  588 (696)
Q Consensus       509 ~r~eGirgLYrG~~p~llr~~p~~ai~f~~YE~lk~~l~~~~~~~~~~~~~~~~laG~lAG~~a~~it~PlDvVKTRlQ~  588 (696)
                      +++||+++||+|+.+.++|.+|+.+++|..||.+|+.+.+.    ........+++|+++++++++++|||||||+|||.
T Consensus       163 ~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~q~  238 (292)
T d1okca_         163 FKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP----KNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM  238 (292)
T ss_dssp             HHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG----GCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hhccchhhhhccccccccceehHhhhhhhhccchhhhcccc----cccchHHHHHHHHHHHHHHhhccccHHHHHHHHHh
Confidence            99999999999999999999999999999999999987543    34567888999999999999999999999999999


Q ss_pred             cCCCC--CCCCCcHHHHHHHHHHhhCcccccccHHHHHHHHHHHHHHHHHHHHHH
Q 005451          589 QIPGS--TSQYSSVYHALQEIGKREGLKGLYRGLIPRLVMYMSQGALFFASYEFF  641 (696)
Q Consensus       589 q~~~~--~~~y~gv~~~~r~I~r~EGi~GLYRGl~~~llr~vp~~al~f~~YE~l  641 (696)
                      +....  ...|.++++|+++|+++||++|||||+.++++|.+| .+++|++||.+
T Consensus       239 ~~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~-~~i~~~~ye~l  292 (292)
T d1okca_         239 QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDEI  292 (292)
T ss_dssp             TTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHH-HHHHHHHHHTC
T ss_pred             cCCCCCCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHH-HHhhhhHhhcC
Confidence            84332  346899999999999999999999999999999876 68889999963
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure