Citrus Sinensis ID: 005466
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 695 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SSG3 | 695 | HIPL1 protein OS=Arabidop | yes | no | 0.912 | 0.912 | 0.696 | 0.0 | |
| Q94F08 | 696 | HIPL2 protein OS=Arabidop | no | no | 0.892 | 0.890 | 0.649 | 0.0 | |
| Q14DK5 | 791 | HHIP-like protein 1 OS=Mu | yes | no | 0.755 | 0.663 | 0.305 | 2e-57 | |
| Q96JK4 | 782 | HHIP-like protein 1 OS=Ho | no | no | 0.751 | 0.667 | 0.290 | 2e-57 | |
| Q6UWX4 | 724 | HHIP-like protein 2 OS=Ho | no | no | 0.741 | 0.711 | 0.290 | 2e-54 | |
| Q9D2G9 | 717 | HHIP-like protein 2 OS=Mu | no | no | 0.753 | 0.730 | 0.283 | 6e-53 | |
| Q7TN16 | 700 | Hedgehog-interacting prot | no | no | 0.650 | 0.645 | 0.236 | 1e-24 | |
| Q96QV1 | 700 | Hedgehog-interacting prot | no | no | 0.648 | 0.644 | 0.230 | 3e-24 | |
| P13650 | 478 | Quinoprotein glucose dehy | no | no | 0.309 | 0.449 | 0.252 | 2e-11 | |
| P73001 | 412 | Uncharacterized protein s | N/A | no | 0.238 | 0.402 | 0.25 | 1e-07 |
| >sp|Q9SSG3|HIPL1_ARATH HIPL1 protein OS=Arabidopsis thaliana GN=HIPL1 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 938 bits (2425), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/643 (69%), Positives = 524/643 (81%), Gaps = 9/643 (1%)
Query: 21 SLSLPLCTDSRAPITLNTTLSFCPYNGKTCCNATGDSQLQKQFQAMNISDSGCSSLLKSI 80
S +LPLC+DSRAP +N+TLSFCPY GKTCCN D+ L KQFQAMNISD GC+S++KSI
Sbjct: 21 SWALPLCSDSRAPSEVNSTLSFCPYKGKTCCNTMKDTSLMKQFQAMNISDKGCASVVKSI 80
Query: 81 LCAKCDQFAGELFTAGSVVRPVPLLCNSTGSNSSQSSKATITDFCSEVWDTCQNVSVRNS 140
LCA CD F+ +LF S + VP+LCNST SS + +FCSE W+TCQNVS+ S
Sbjct: 81 LCANCDPFSSDLFRDNSDQQSVPILCNST------SSANSTENFCSETWETCQNVSISGS 134
Query: 141 PFSPSLQGQAGAPVSSNFTKLTEFWQSKADFCNAFGGTSKDGSVCFNGEPVTLN-NTGTP 199
F+ SLQG+AGAP + N +KL + WQSK DFC+AFGG S + +VCF+GEPV LN N TP
Sbjct: 135 LFAASLQGRAGAPSNKNASKLADLWQSKTDFCSAFGGASSNETVCFSGEPVALNDNDTTP 194
Query: 200 N-PPQGLCLEKIGNGSYLNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSP 258
+ PP G+CLEKIGNGSYLNMV HPDGSNRAFFS Q G ++LA IP+Q G +++D SSP
Sbjct: 195 DKPPSGICLEKIGNGSYLNMVPHPDGSNRAFFSTQPGIVFLAGIPDQDSGGVLDVDPSSP 254
Query: 259 FADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPS 318
F D+TDE+HFDTEFG+MGMAFHP FA+NGRFFASFNCDK KWPGC GRCSCNSDVNCDPS
Sbjct: 255 FVDMTDEIHFDTEFGMMGMAFHPKFAQNGRFFASFNCDKSKWPGCTGRCSCNSDVNCDPS 314
Query: 319 KLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGHHGGQLLF 378
KL D+G+QPCQYQTV+AEYT N T+S+PS AK AKP+EVRRIFTMGL F HH GQ+LF
Sbjct: 315 KLTPDSGSQPCQYQTVIAEYTANSTSSDPSKAKNAKPTEVRRIFTMGLPFTSHHAGQILF 374
Query: 379 GPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIP 438
GP DGY+YFMMGDGGG ADPYNF+QNKKSLLGKI RLDVDNIPSA+EI K+GLWG+YSIP
Sbjct: 375 GP-DGYLYFMMGDGGGGADPYNFAQNKKSLLGKIMRLDVDNIPSASEISKMGLWGNYSIP 433
Query: 439 KDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYGW 498
KDNPF ED L+PEIWA+GLRNPWRCSFDS RPSYFMCADVGQD YEEVD+I++GGNYGW
Sbjct: 434 KDNPFREDKELEPEIWAVGLRNPWRCSFDSSRPSYFMCADVGQDTYEEVDLISKGGNYGW 493
Query: 499 RLYEGPYLFTPLETPGGITPLNSVSPIFPVLGYNHSEVNKKEGSASITGGYFYRSMTDPC 558
R+YEGP LF P +PGG T + S++PIFPV+GYNHSEV+ SASITGGYFYRS TDPC
Sbjct: 494 RVYEGPDLFHPESSPGGNTSVKSLNPIFPVMGYNHSEVDSSGKSASITGGYFYRSETDPC 553
Query: 559 MFGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARDSPIQCKVLPGNDLPSLGYIY 618
+ GRY+YADLY +WA E+P NSG+F T + FSCA DSP++C PG SLGY++
Sbjct: 554 IAGRYVYADLYGNGVWAGIETPANSGSFVTKRTTFSCASDSPMKCSDSPGTSGLSLGYVF 613
Query: 619 SFGEDNRKDIFILTSDGVYRVVRPSRCSYTCSKENTTVSAGPG 661
SFGEDN KDI++LTS+GVYRVVRPSRC+ TCSKEN+T PG
Sbjct: 614 SFGEDNNKDIYLLTSNGVYRVVRPSRCNLTCSKENSTARRNPG 656
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Arabidopsis thaliana (taxid: 3702) |
| >sp|Q94F08|HIPL2_ARATH HIPL2 protein OS=Arabidopsis thaliana GN=HIPL2 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q14DK5|HIPL1_MOUSE HHIP-like protein 1 OS=Mus musculus GN=Hhipl1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q96JK4|HIPL1_HUMAN HHIP-like protein 1 OS=Homo sapiens GN=HHIPL1 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q6UWX4|HIPL2_HUMAN HHIP-like protein 2 OS=Homo sapiens GN=HHIPL2 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9D2G9|HIPL2_MOUSE HHIP-like protein 2 OS=Mus musculus GN=Hhipl2 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q7TN16|HHIP_MOUSE Hedgehog-interacting protein OS=Mus musculus GN=Hhip PE=1 SV=2 | Back alignment and function description |
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| >sp|Q96QV1|HHIP_HUMAN Hedgehog-interacting protein OS=Homo sapiens GN=HHIP PE=1 SV=3 | Back alignment and function description |
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| >sp|P13650|DHGB_ACICA Quinoprotein glucose dehydrogenase B OS=Acinetobacter calcoaceticus GN=gdhB PE=1 SV=1 | Back alignment and function description |
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| >sp|P73001|Y1608_SYNY3 Uncharacterized protein slr1608 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1608 PE=3 SV=1 | Back alignment and function description |
|---|
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 695 | ||||||
| 255540863 | 698 | HIPL1 protein precursor, putative [Ricin | 0.978 | 0.974 | 0.749 | 0.0 | |
| 224133338 | 697 | predicted protein [Populus trichocarpa] | 0.916 | 0.913 | 0.774 | 0.0 | |
| 356516736 | 694 | PREDICTED: HIPL1 protein-like [Glycine m | 0.936 | 0.938 | 0.735 | 0.0 | |
| 356508614 | 693 | PREDICTED: HIPL1 protein-like [Glycine m | 0.936 | 0.939 | 0.738 | 0.0 | |
| 297734050 | 696 | unnamed protein product [Vitis vinifera] | 0.935 | 0.933 | 0.746 | 0.0 | |
| 225456616 | 724 | PREDICTED: HIPL1 protein-like [Vitis vin | 0.935 | 0.897 | 0.746 | 0.0 | |
| 449469480 | 696 | PREDICTED: HIPL1 protein-like [Cucumis s | 0.917 | 0.916 | 0.726 | 0.0 | |
| 357504203 | 697 | Hedgehog-interacting protein [Medicago t | 0.900 | 0.898 | 0.746 | 0.0 | |
| 359473388 | 937 | PREDICTED: HIPL1 protein-like [Vitis vin | 0.902 | 0.669 | 0.704 | 0.0 | |
| 296086453 | 702 | unnamed protein product [Vitis vinifera] | 0.902 | 0.893 | 0.704 | 0.0 |
| >gi|255540863|ref|XP_002511496.1| HIPL1 protein precursor, putative [Ricinus communis] gi|223550611|gb|EEF52098.1| HIPL1 protein precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1049 bits (2713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/683 (74%), Positives = 578/683 (84%), Gaps = 3/683 (0%)
Query: 1 MGGVLAIIFLFANFVMLLVPSLSLPLCTDSRAPITLNTTLSFCPYNGKTCCNATGDSQLQ 60
MG VLAI LF ++L P+ SLPLCT+SRAP TLNTTL+FC YNG TCCN+T D+QLQ
Sbjct: 1 MGAVLAIALLFFYLLLLPDPTFSLPLCTNSRAPFTLNTTLNFCSYNGSTCCNSTEDTQLQ 60
Query: 61 KQFQAMNISDSGCSSLLKSILCAKCDQFAGELFTAGSVVRPVPLLCNSTGSNSSQSSKAT 120
KQFQ MNIS+ GC+SLLKSILCA+CD F+GELF SV RPVP+LCNST S +S S T
Sbjct: 61 KQFQGMNISNPGCASLLKSILCARCDPFSGELFIINSVQRPVPVLCNSTASANSSQSGQT 120
Query: 121 ITDFCSEVWDTCQNVSVRNSPFSPSLQGQAGAPVSSNFTKLTEFWQSKADFCNAFGGTSK 180
+ DFCS+VWDTC+NVS+ NSPF+PSL+GQAG PV+S+ T LT+ WQSK DFC AFGG S
Sbjct: 121 VNDFCSKVWDTCENVSISNSPFAPSLKGQAGLPVNSSITTLTDLWQSKTDFCKAFGGESS 180
Query: 181 DGSVCFNGEPVTLNNTGTPNPPQGLCLEKIGNGSYLNMVAHPDGSNRAFFSNQEGKIWLA 240
DGSVC+NGEPVTLN+T TPNPP GLCLEKIGNGSYLNMVAHPDGSNRAFFS+Q GKIWLA
Sbjct: 181 DGSVCYNGEPVTLNDTETPNPPHGLCLEKIGNGSYLNMVAHPDGSNRAFFSSQPGKIWLA 240
Query: 241 TIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFNCDKVKW 300
TIPE+G G T+E+D SSPF DLTDEV+F + FG+MGMAFHPNFA+NGRFFASFNCDKV+W
Sbjct: 241 TIPEEGSGGTLEIDESSPFIDLTDEVYFSSAFGMMGMAFHPNFAQNGRFFASFNCDKVRW 300
Query: 301 PGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRR 360
PGC GRCSCNSDVNCDPSKL DNGAQPCQY TV+AEY+ NGTA SLA AKP EVRR
Sbjct: 301 PGCVGRCSCNSDVNCDPSKLPPDNGAQPCQYHTVIAEYSANGTADGGSLATTAKPFEVRR 360
Query: 361 IFTMGLSFNGHHGGQLLFGPTDGYMYFMM---GDGGGTADPYNFSQNKKSLLGKITRLDV 417
IFTMGL F HHGGQ+LFGPTDGY+YFMM G G + DPYNF QNKKSLLGKI RLDV
Sbjct: 361 IFTMGLPFTSHHGGQILFGPTDGYLYFMMGDGGGPGDSGDPYNFCQNKKSLLGKIMRLDV 420
Query: 418 DNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCA 477
DNIPSA EI LG WG+YS PKDNPFSED L PEIWALGLRNPWRCSFDS+RPSYFMCA
Sbjct: 421 DNIPSAEEISTLGRWGNYSTPKDNPFSEDKDLLPEIWALGLRNPWRCSFDSERPSYFMCA 480
Query: 478 DVGQDVYEEVDIITRGGNYGWRLYEGPYLFTPLETPGGITPLNSVSPIFPVLGYNHSEVN 537
DVGQDVYEEVDIIT+GGNYGWR+YEGPY + P +PGG TP NS+SPIFPV+GYNHSEVN
Sbjct: 481 DVGQDVYEEVDIITKGGNYGWRVYEGPYRYNPKSSPGGNTPPNSISPIFPVMGYNHSEVN 540
Query: 538 KKEGSASITGGYFYRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSCAR 597
K EGSASITGGYFYRS TDPCM+GRYLYADLYA+ LWA +E+PE SGNFT+++IPFSCA+
Sbjct: 541 KNEGSASITGGYFYRSKTDPCMYGRYLYADLYASGLWAGTETPEGSGNFTSNRIPFSCAK 600
Query: 598 DSPIQCKVLPGNDLPSLGYIYSFGEDNRKDIFILTSDGVYRVVRPSRCSYTCSKENTTVS 657
DSP+QC + G+ LPSLGYI+SFGEDNR+D+F+L S GVYRVVRPSRC+YTCSKEN T
Sbjct: 601 DSPVQCTSVAGSSLPSLGYIFSFGEDNRRDVFLLASSGVYRVVRPSRCNYTCSKENETAV 660
Query: 658 AGPGPATSPNSFANRLRDPYNSL 680
P P TSP S A +L PY+++
Sbjct: 661 GSPSPTTSPPSHAGQLHCPYSTI 683
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224133338|ref|XP_002321542.1| predicted protein [Populus trichocarpa] gi|222868538|gb|EEF05669.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356516736|ref|XP_003527049.1| PREDICTED: HIPL1 protein-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356508614|ref|XP_003523050.1| PREDICTED: HIPL1 protein-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|297734050|emb|CBI15297.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225456616|ref|XP_002266458.1| PREDICTED: HIPL1 protein-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449469480|ref|XP_004152448.1| PREDICTED: HIPL1 protein-like [Cucumis sativus] gi|449487801|ref|XP_004157807.1| PREDICTED: HIPL1 protein-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|357504203|ref|XP_003622390.1| Hedgehog-interacting protein [Medicago truncatula] gi|355497405|gb|AES78608.1| Hedgehog-interacting protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|359473388|ref|XP_002268718.2| PREDICTED: HIPL1 protein-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|296086453|emb|CBI32042.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 695 | ||||||
| TAIR|locus:2027273 | 695 | AT1G74790 [Arabidopsis thalian | 0.942 | 0.942 | 0.653 | 2.7e-249 | |
| TAIR|locus:2172224 | 696 | HIPL2 "hipl2 protein precursor | 0.899 | 0.897 | 0.635 | 3.7e-229 | |
| TAIR|locus:2178027 | 690 | AT5G39970 [Arabidopsis thalian | 0.943 | 0.950 | 0.542 | 5.4e-205 | |
| MGI|MGI:1919265 | 791 | Hhipl1 "hedgehog interacting p | 0.356 | 0.313 | 0.366 | 8.1e-52 | |
| RGD|1311698 | 791 | Hhipl1 "HHIP-like 1" [Rattus n | 0.356 | 0.313 | 0.366 | 1.7e-51 | |
| UNIPROTKB|Q96JK4 | 782 | HHIPL1 "HHIP-like protein 1" [ | 0.342 | 0.304 | 0.383 | 2.2e-48 | |
| UNIPROTKB|F1MI35 | 786 | HHIPL1 "Uncharacterized protei | 0.356 | 0.315 | 0.352 | 2.3e-46 | |
| UNIPROTKB|F1NC92 | 551 | HHIPL1 "Uncharacterized protei | 0.378 | 0.477 | 0.337 | 7.2e-44 | |
| ZFIN|ZDB-GENE-090306-3 | 820 | hhipl1 "HHIP-like 1" [Danio re | 0.289 | 0.245 | 0.362 | 2.2e-42 | |
| UNIPROTKB|F1S9I3 | 717 | HHIPL2 "Uncharacterized protei | 0.297 | 0.288 | 0.360 | 3.5e-42 |
| TAIR|locus:2027273 AT1G74790 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2401 (850.3 bits), Expect = 2.7e-249, P = 2.7e-249
Identities = 434/664 (65%), Positives = 512/664 (77%)
Query: 7 IIFLFANFXXXXXXXXXXXXCTDSRAPITLNTTLSFCPYNGKTCCNATGDSQLQKQFQAM 66
++FLF C+DSRAP +N+TLSFCPY GKTCCN D+ L KQFQAM
Sbjct: 7 LVFLFLFLSCFALSSWALPLCSDSRAPSEVNSTLSFCPYKGKTCCNTMKDTSLMKQFQAM 66
Query: 67 NISDSGCSSLLKSILCAKCDQFAGELFTAGSVVRPVPLLCNXXXXXXXXXXKATITDFCS 126
NISD GC+S++KSILCA CD F+ +LF S + VP+LCN +FCS
Sbjct: 67 NISDKGCASVVKSILCANCDPFSSDLFRDNSDQQSVPILCNSTSSANSTE------NFCS 120
Query: 127 EVWDTCQNVSVRNSPFSPSLQGQAGAPVSSNFTKLTEFWQSKADFCNAFGGTSKDGSVCF 186
E W+TCQNVS+ S F+ SLQG+AGAP + N +KL + WQSK DFC+AFGG S + +VCF
Sbjct: 121 ETWETCQNVSISGSLFAASLQGRAGAPSNKNASKLADLWQSKTDFCSAFGGASSNETVCF 180
Query: 187 NGEPVTLN-NTGTPN-PPQGLCLEKIGNGSYLNMVAHPDGSNRAFFSNQEGKIWLATIPE 244
+GEPV LN N TP+ PP G+CLEKIGNGSYLNMV HPDGSNRAFFS Q G ++LA IP+
Sbjct: 181 SGEPVALNDNDTTPDKPPSGICLEKIGNGSYLNMVPHPDGSNRAFFSTQPGIVFLAGIPD 240
Query: 245 QGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFNCDKVKWPGCA 304
Q G +++D SSPF D+TDE+HFDTEFG+MGMAFHP FA+NGRFFASFNCDK KWPGC
Sbjct: 241 QDSGGVLDVDPSSPFVDMTDEIHFDTEFGMMGMAFHPKFAQNGRFFASFNCDKSKWPGCT 300
Query: 305 GRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTM 364
GRCSCNSDVNCDPSKL D+G+QPCQYQTV+AEYT N T+S+PS AK AKP+EVRRIFTM
Sbjct: 301 GRCSCNSDVNCDPSKLTPDSGSQPCQYQTVIAEYTANSTSSDPSKAKNAKPTEVRRIFTM 360
Query: 365 GLSFNGHHGGQLLFGPTXXXXXXXXXXXXXTADPYNFSQNKKSLLGKITRLDVDNIPSAA 424
GL F HH GQ+LFGP ADPYNF+QNKKSLLGKI RLDVDNIPSA+
Sbjct: 361 GLPFTSHHAGQILFGPDGYLYFMMGDGGGG-ADPYNFAQNKKSLLGKIMRLDVDNIPSAS 419
Query: 425 EIEKLGLWGSYSIPKDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVY 484
EI K+GLWG+YSIPKDNPF ED L+PEIWA+GLRNPWRCSFDS RPSYFMCADVGQD Y
Sbjct: 420 EISKMGLWGNYSIPKDNPFREDKELEPEIWAVGLRNPWRCSFDSSRPSYFMCADVGQDTY 479
Query: 485 EEVDIITRGGNYGWRLYEGPYLFTPLETPGGITPLNSVSPIFPVLGYNHSEVNKKEGSAS 544
EEVD+I++GGNYGWR+YEGP LF P +PGG T + S++PIFPV+GYNHSEV+ SAS
Sbjct: 480 EEVDLISKGGNYGWRVYEGPDLFHPESSPGGNTSVKSLNPIFPVMGYNHSEVDSSGKSAS 539
Query: 545 ITGGYFYRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARDSPIQCK 604
ITGGYFYRS TDPC+ GRY+YADLY +WA E+P NSG+F T + FSCA DSP++C
Sbjct: 540 ITGGYFYRSETDPCIAGRYVYADLYGNGVWAGIETPANSGSFVTKRTTFSCASDSPMKCS 599
Query: 605 VLPGNDLPSLGYIYSFGEDNRKDIFILTSDGVYRVVRPSRCSYTCSKENTTVSAGPGPAT 664
PG SLGY++SFGEDN KDI++LTS+GVYRVVRPSRC+ TCSKEN+T PG ++
Sbjct: 600 DSPGTSGLSLGYVFSFGEDNNKDIYLLTSNGVYRVVRPSRCNLTCSKENSTARRNPGTSS 659
Query: 665 SPNS 668
SP+S
Sbjct: 660 SPSS 663
|
|
| TAIR|locus:2172224 HIPL2 "hipl2 protein precursor" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178027 AT5G39970 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1919265 Hhipl1 "hedgehog interacting protein-like 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| RGD|1311698 Hhipl1 "HHIP-like 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q96JK4 HHIPL1 "HHIP-like protein 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1MI35 HHIPL1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NC92 HHIPL1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-090306-3 hhipl1 "HHIP-like 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1S9I3 HHIPL2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9SSG3 | HIPL1_ARATH | No assigned EC number | 0.6967 | 0.9122 | 0.9122 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | eugene3.00150459 | hypothetical protein (697 aa) | ||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 695 | |||
| pfam07995 | 324 | pfam07995, GSDH, Glucose / Sorbosone dehydrogenase | 1e-28 | |
| COG2133 | 399 | COG2133, COG2133, Glucose/sorbosone dehydrogenases | 1e-19 | |
| TIGR03606 | 454 | TIGR03606, non_repeat_PQQ, dehydrogenase, PQQ-depe | 1e-13 |
| >gnl|CDD|219689 pfam07995, GSDH, Glucose / Sorbosone dehydrogenase | Back alignment and domain information |
|---|
Score = 116 bits (294), Expect = 1e-28
Identities = 81/283 (28%), Positives = 116/283 (40%), Gaps = 74/283 (26%)
Query: 218 MVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGM 277
+ PDG R + + G++ L + G S+P A + EV + GL+ +
Sbjct: 6 LAFLPDG--RLLVTERPGRLRL--VDADG-------KLSTPVAGV-PEVVARGQGGLLDV 53
Query: 278 AFHPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAE 337
A HP+FA N + S+ D G T VA
Sbjct: 54 ALHPDFATNRTIYLSYAEG-------------------------DDGGNG-----TAVAR 83
Query: 338 YTVNGTASEPSLAKRAKPSEVRRIFTM--GLSFNGHHGGQLLFGPTDGYMYFMMGDGGGT 395
++ +L +V IF +S GH G ++ FGP DG +Y GD G
Sbjct: 84 ARLSDD--GTAL------EDVEVIFRQIPKVSGGGHFGSRIAFGP-DGTLYITTGDRG-- 132
Query: 396 ADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIWA 455
D N +Q+ S LGKI RL+ D GS +P DNPF G +PEIW+
Sbjct: 133 -DRDN-AQDLSSHLGKILRLNPD--------------GS--VPADNPFVGRGGAKPEIWS 174
Query: 456 LGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYGW 498
G RNP +FD D + + G +E+++I G NYGW
Sbjct: 175 YGHRNPQGLAFDPDTGRLWA-HEHGPRGGDEINLIEPGKNYGW 216
|
Members of this family are glucose/sorbosone dehydrogenases that possess a beta-propeller fold. Length = 324 |
| >gnl|CDD|225044 COG2133, COG2133, Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|234278 TIGR03606, non_repeat_PQQ, dehydrogenase, PQQ-dependent, s-GDH family | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 695 | |||
| TIGR03606 | 454 | non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH | 100.0 | |
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 100.0 | |
| COG2133 | 399 | Glucose/sorbosone dehydrogenases [Carbohydrate tra | 100.0 | |
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 100.0 | |
| PF03024 | 167 | Folate_rec: Folate receptor family; InterPro: IPR0 | 99.51 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 98.34 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 97.87 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 97.6 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 97.0 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 94.98 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 92.4 | |
| KOG4659 | 1899 | consensus Uncharacterized conserved protein (Rhs f | 92.28 | |
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 91.79 | |
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 91.27 | |
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 91.25 | |
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 90.83 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 90.62 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 89.87 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 88.45 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 87.98 | |
| TIGR03606 | 454 | non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH | 87.58 | |
| COG4257 | 353 | Vgb Streptogramin lyase [Defense mechanisms] | 87.03 |
| >TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-60 Score=522.70 Aligned_cols=349 Identities=23% Similarity=0.427 Sum_probs=258.3
Q ss_pred CCCCCcEEEEEecCce--eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceee
Q 005466 200 NPPQGLCLEKIGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMG 276 (695)
Q Consensus 200 ~~p~G~~le~va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLG 276 (695)
+.|.+|.+|+|++||. |+|+++||| ||||+|| .|+|++++ ++++. ..+++++...+...+|+||||
T Consensus 15 ~~p~~f~~~~va~GL~~Pw~maflPDG--~llVtER~~G~I~~v~-~~~~~--------~~~~~~l~~v~~~~ge~GLlg 83 (454)
T TIGR03606 15 AASENFDKKVLLSGLNKPWALLWGPDN--QLWVTERATGKILRVN-PETGE--------VKVVFTLPEIVNDAQHNGLLG 83 (454)
T ss_pred cCCCCcEEEEEECCCCCceEEEEcCCC--eEEEEEecCCEEEEEe-CCCCc--------eeeeecCCceeccCCCCceee
Confidence 4588999999999998 999999999 8999999 69999985 33222 233456643333347999999
Q ss_pred eeeCCCC---CCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccC
Q 005466 277 MAFHPNF---AKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRA 353 (695)
Q Consensus 277 iAfhPdF---~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~ 353 (695)
|||||+| ++|++|||+|+....... . ....+|+||+.+... .
T Consensus 84 lal~PdF~~~~~n~~lYvsyt~~~~~~~-------------------------~--~~~~~I~R~~l~~~~--------~ 128 (454)
T TIGR03606 84 LALHPDFMQEKGNPYVYISYTYKNGDKE-------------------------L--PNHTKIVRYTYDKST--------Q 128 (454)
T ss_pred EEECCCccccCCCcEEEEEEeccCCCCC-------------------------c--cCCcEEEEEEecCCC--------C
Confidence 9999999 999999999996422100 0 013599999985421 1
Q ss_pred CCCCeEEEEEecCCC-CCccccceEEcCCCCeEEEEecCCCCCC-----Ccc----------CccccCCCCCeeEEEEec
Q 005466 354 KPSEVRRIFTMGLSF-NGHHGGQLLFGPTDGYMYFMMGDGGGTA-----DPY----------NFSQNKKSLLGKITRLDV 417 (695)
Q Consensus 354 ~~~e~~~Il~~~~P~-~~H~GG~L~FGP~DG~LYi~~GDgg~~~-----DP~----------~~aQn~ssl~GKILRIdv 417 (695)
.+.++++||+ ++|. ..|+||+|+|+| ||+|||++||++... .|. .++||+++++|||||||+
T Consensus 129 ~l~~~~~Il~-~lP~~~~H~GgrI~FgP-DG~LYVs~GD~g~~~~~n~~~~~~aQ~~~~~~~~~~~d~~~~~GkILRin~ 206 (454)
T TIGR03606 129 TLEKPVDLLA-GLPAGNDHNGGRLVFGP-DGKIYYTIGEQGRNQGANFFLPNQAQHTPTQQELNGKDYHAYMGKVLRLNL 206 (454)
T ss_pred ccccceEEEe-cCCCCCCcCCceEEECC-CCcEEEEECCCCCCCcccccCcchhccccccccccccCcccCceEEEEEcC
Confidence 2345677876 5665 479999999999 999999999997521 110 124588999999999999
Q ss_pred CCCCchhhhhhcccCCCcCCCCCCCCCCCCCCCCeEEEeccccceeeeecCCCCCeEEEEEccCCCceeEEEeecCCCCC
Q 005466 418 DNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYG 497 (695)
Q Consensus 418 Dg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~~pEI~A~GlRNP~r~sfD~~~g~~l~~~DvG~d~~EEIn~I~kG~NYG 497 (695)
|| +||+||||++ ++++||||||||||||++||| ++ +||++|||++.+||||+|++|+|||
T Consensus 207 DG----------------siP~dNPf~~--g~~~eIyA~G~RNp~Gla~dp-~G-~Lw~~e~Gp~~~DEiN~I~~G~NYG 266 (454)
T TIGR03606 207 DG----------------SIPKDNPSIN--GVVSHIFTYGHRNPQGLAFTP-DG-TLYASEQGPNSDDELNIIVKGGNYG 266 (454)
T ss_pred CC----------------CCCCCCCccC--CCcceEEEEeccccceeEECC-CC-CEEEEecCCCCCcEEEEeccCCcCC
Confidence 99 8999999984 678999999999999999999 66 5999999999999999999999999
Q ss_pred cccccCCC--------cCCCCC-----------CCCCC-----CCCCCCCCCCceee-c------c-CCccC-----CCC
Q 005466 498 WRLYEGPY--------LFTPLE-----------TPGGI-----TPLNSVSPIFPVLG-Y------N-HSEVN-----KKE 540 (695)
Q Consensus 498 Wp~~eG~~--------~~~p~~-----------~p~~~-----t~~~~~~~i~Pi~~-y------~-H~~~~-----~~~ 540 (695)
||.++|.. .|.... .+.+. +......++.|++. | . |.-.. ...
T Consensus 267 WP~~~G~~~~~~~~~~~ys~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (454)
T TIGR03606 267 WPNVAGYKDDSGYVYANYSAAANKSIKTLAQNGIPAGVPVTKESEWTAKNFVPPLKTLYTVQDTYNYNDATCGEMTYICW 346 (454)
T ss_pred CCceeecCccccccccccccccccccccccccccCcCccccccccccCccccCCceeccccccccccccccccccccccC
Confidence 99998732 222110 00010 01111258899974 2 0 11000 013
Q ss_pred CCcccccceeec--CCCCCcccCcEEEEEeccceeEEeecCCCCCCCeeEEEeeeecCCCCcccccccCCCCCCCCCccc
Q 005466 541 GSASITGGYFYR--SMTDPCMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARDSPIQCKVLPGNDLPSLGYIY 618 (695)
Q Consensus 541 Gs~S~tGg~vYr--G~~fP~l~G~yifgD~~sg~lw~l~~~p~~sG~~~~~~i~f~c~~~~P~~c~~~~g~~~~~~gri~ 618 (695)
++.|++|+.||+ |++||+|+|.+|++-+..++|+.+..+.+. ++.+..+.. ++...+|||
T Consensus 347 psiapsg~~~y~~~g~~~p~w~g~llv~~L~~~~l~r~~l~~~~-~~v~~~~~~-----------------~~~~~~RiR 408 (454)
T TIGR03606 347 PTIAPSSAYYYKGGEKGITGWENSLLIPSLKRGVIYRIKLDPDY-STVYGDAVP-----------------MFKTNNRYR 408 (454)
T ss_pred CCcCCceeEEEecCcccCcccCCCEEEEEcCCCeEEEEEecCCc-ceecceeEE-----------------eecCCCeeE
Confidence 778999999999 699999999999999999999999886421 111101111 111257999
Q ss_pred eEEEcCCC-cEEEEeCC
Q 005466 619 SFGEDNRK-DIFILTSD 634 (695)
Q Consensus 619 sf~ed~dG-eLYvlts~ 634 (695)
++.++||| .|||+|++
T Consensus 409 dv~~~pDg~~iy~~td~ 425 (454)
T TIGR03606 409 DVIASPDGNVLYVATDN 425 (454)
T ss_pred EEEECCCCCEEEEEEcC
Confidence 99999997 99999973
|
PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis. |
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
| >COG2133 Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
| >PF03024 Folate_rec: Folate receptor family; InterPro: IPR018143 This entry represents a domain found in folate receptors and at the N terminus of hedgehog-interacting proteins | Back alignment and domain information |
|---|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >KOG4659 consensus Uncharacterized conserved protein (Rhs family) [Function unknown] | Back alignment and domain information |
|---|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family | Back alignment and domain information |
|---|
| >COG4257 Vgb Streptogramin lyase [Defense mechanisms] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 695 | ||||
| 3ho3_A | 481 | Crystal Structure Of Hedgehog-interacting Protein ( | 4e-17 | ||
| 2wg3_C | 463 | Crystal Structure Of The Complex Between Human Hedg | 4e-17 | ||
| 2wg4_B | 457 | Crystal Structure Of The Complex Between Human Hedg | 4e-17 | ||
| 2wft_A | 458 | Crystal Structure Of The Human Hip Ectodomain Lengt | 5e-17 | ||
| 3ho4_A | 481 | Crystal Structure Of Hedgehog-Interacting Protein ( | 5e-17 | ||
| 3a9g_A | 354 | Crystal Structure Of Pqq-Dependent Sugar Dehydrogen | 1e-08 | ||
| 1cru_A | 454 | Soluble Quinoprotein Glucose Dehydrogenase From Aci | 7e-08 | ||
| 2ism_A | 352 | Crystal Structure Of The Putative Oxidoreductase (G | 4e-07 | ||
| 2g8s_A | 353 | Crystal Structure Of The Soluble Aldose Sugar Dehyd | 1e-05 | ||
| 3das_A | 347 | Structure Of The Pqq-Bound Form Of Aldose Sugar Deh | 5e-05 |
| >pdb|3HO3|A Chain A, Crystal Structure Of Hedgehog-interacting Protein (hhip) Length = 481 | Back alignment and structure |
|
| >pdb|2WG3|C Chain C, Crystal Structure Of The Complex Between Human Hedgehog- Interacting Protein Hip And Desert Hedgehog Without Calcium Length = 463 | Back alignment and structure |
| >pdb|2WFT|A Chain A, Crystal Structure Of The Human Hip Ectodomain Length = 458 | Back alignment and structure |
| >pdb|3HO4|A Chain A, Crystal Structure Of Hedgehog-Interacting Protein (Hhip) Length = 481 | Back alignment and structure |
| >pdb|3A9G|A Chain A, Crystal Structure Of Pqq-Dependent Sugar Dehydrogenase Apo-Form Length = 354 | Back alignment and structure |
| >pdb|1CRU|A Chain A, Soluble Quinoprotein Glucose Dehydrogenase From Acinetobacter Calcoaceticus In Complex With Pqq And Methylhydrazine Length = 454 | Back alignment and structure |
| >pdb|2ISM|A Chain A, Crystal Structure Of The Putative Oxidoreductase (Glucose Dehydrogenase) (Ttha0570) From Thermus Theromophilus Hb8 Length = 352 | Back alignment and structure |
| >pdb|2G8S|A Chain A, Crystal Structure Of The Soluble Aldose Sugar Dehydrogenase (Asd) From Escherichia Coli In The Apo-Form Length = 353 | Back alignment and structure |
| >pdb|3DAS|A Chain A, Structure Of The Pqq-Bound Form Of Aldose Sugar Dehydrogenase (Adh) From Streptomyces Coelicolor Length = 347 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A Length = 463 | Back alignment and structure |
|---|
Score = 303 bits (777), Expect = 6e-96
Identities = 99/482 (20%), Positives = 160/482 (33%), Gaps = 104/482 (21%)
Query: 204 GLCLEKIGNG--SYLNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFAD 261
C++++ +G + + DGS R F +EG + + T PE + P+ D
Sbjct: 3 CFCIQEVVSGLRQPVGALHSGDGSQRLFILEKEGYVKILT-PEGEI-------FKEPYLD 54
Query: 262 LTDEVHFDT----EFGLMGMAFHPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDP 317
+ V E GL+ +AFHPN+ KNG+ + S+ +
Sbjct: 55 IHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN--------------------- 93
Query: 318 SKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGHHGGQLL 377
+ P + V EYTV+ + R + H GGQLL
Sbjct: 94 ---QERWAIGPHDHILRVVEYTVSRKNPH-----QVDLRTARVFLEVAELHRKHLGGQLL 145
Query: 378 FGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSI 437
FGP DG++Y ++GDG T D G + RLDVD YSI
Sbjct: 146 FGP-DGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCN---------VPYSI 195
Query: 438 PKDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPS-----YFMCADVGQDVYEEVDI--I 490
P+ NP + PE++A GL +P RC+ D +C+D I I
Sbjct: 196 PRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDSNGKNRSSARILQI 255
Query: 491 TRGGNYGWRLYEGPYLFTPLETPGGITPLNSVSPIFPVLGYNHSEVNKKEGSASITGGYF 550
+G +Y +L + + + GG+
Sbjct: 256 IKGKDYESE--------------------------PSLLEFKPF------SNGPLVGGFV 283
Query: 551 YRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARDSPIQCKVLPGND 610
YR ++G Y++ D +SP ++ P+
Sbjct: 284 YRGCQSERLYGSYVFGD-RNGNFLTLQQSPVTKQW-----------QEKPLCLGTSGSCR 331
Query: 611 LPSLGYIYSFGEDNRKDIFILTSDGVYRVVRPSRCSYTCSKENTTVSAGPGPATSPNSFA 670
G+I FGED +++IL+S + + + P
Sbjct: 332 GYFSGHILGFGEDELGEVYILSSSKSMTQTHNGKLYKIVDPKRPLMPEECRATVQPAQTL 391
Query: 671 NR 672
Sbjct: 392 TS 393
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A Length = 454 | Back alignment and structure |
|---|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} Length = 352 | Back alignment and structure |
|---|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} Length = 347 | Back alignment and structure |
|---|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* Length = 354 | Back alignment and structure |
|---|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} Length = 353 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 695 | |||
| 2wg3_C | 463 | Hedgehog-interacting protein; lipoprotein, develop | 100.0 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 100.0 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 100.0 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 100.0 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 100.0 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 100.0 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 98.45 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 98.45 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 98.45 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 98.45 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 98.37 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 98.27 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 98.25 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 98.24 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 98.2 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 98.17 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 98.15 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 98.1 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 98.04 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 98.04 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 98.02 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 97.99 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 97.97 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 97.94 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 97.85 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 97.83 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 97.82 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 97.77 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 97.7 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 97.7 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 97.64 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 97.5 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 97.5 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 97.46 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 97.45 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 97.43 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 97.43 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 97.43 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 97.35 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 97.34 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 97.3 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 97.29 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 97.29 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 97.28 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 97.27 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 97.26 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 97.19 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 97.17 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 97.15 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 97.05 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 96.98 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 96.88 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 96.83 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 96.82 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 96.8 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 96.74 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 96.7 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 96.69 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 96.57 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 96.54 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 96.5 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 96.41 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 96.4 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 96.32 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 96.2 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 96.14 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 96.11 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 96.08 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 96.01 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 96.01 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 95.94 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 95.84 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 95.83 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 95.66 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 95.47 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 95.07 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 95.02 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 94.97 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 94.73 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 94.61 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 94.6 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 94.41 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 93.81 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 93.81 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 93.69 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 93.59 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 93.42 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 93.28 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 92.88 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 92.18 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 91.23 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 91.04 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 90.3 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 89.83 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 89.04 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 88.97 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 88.16 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 88.06 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 87.71 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 86.91 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 86.83 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 86.5 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 86.04 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 85.81 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 85.09 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 84.85 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 84.45 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 84.2 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 84.02 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 83.01 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 83.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 82.65 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 82.61 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 82.19 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 81.99 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 81.75 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 81.39 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 81.34 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 80.91 |
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-67 Score=581.02 Aligned_cols=353 Identities=30% Similarity=0.582 Sum_probs=271.0
Q ss_pred CCCcEEEEEecCce--eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceee----CCCCcee
Q 005466 202 PQGLCLEKIGNGSY--LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHF----DTEFGLM 275 (695)
Q Consensus 202 p~G~~le~va~Gl~--~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~----~~E~GLL 275 (695)
+.||++|+||+||. |+|+++|||++||||+||.|+||+++ + ++. . .+++++|+...+.. .+|+|||
T Consensus 1 ~~gf~v~~va~gL~~P~~~a~~pdG~~rl~V~er~G~i~~~~-~-~g~--~----~~~~~~~~~~~~~~g~~~~~e~Gll 72 (463)
T 2wg3_C 1 HNCFCIQEVVSGLRQPVGALHSGDGSQRLFILEKEGYVKILT-P-EGE--I----FKEPYLDIHKLVQSGIKGGDERGLL 72 (463)
T ss_dssp -CCEEEEEEEEEESSEEEEECCSSSSCCEEEEETTTEEEEEC-T-TSC--B----CSSCSEECTTTBCCCCSSSCCCSEE
T ss_pred CCceEEEEeccCCCCceEEEECCCCCeEEEEEeCCceEEEEe-C-CCC--e----eeeeecCCcceeccCccccCCCcce
Confidence 35899999999998 99999999988999999999999985 2 232 1 24678888654432 3599999
Q ss_pred eeeeCCCCCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCC
Q 005466 276 GMAFHPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKP 355 (695)
Q Consensus 276 GiAfhPdF~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~ 355 (695)
||||||+|++|++|||+|+.....+. + .+.....+|+||+++.... ..+++
T Consensus 73 gia~~P~f~~n~~lYv~yt~~~~~~~----------------------~--~~~~~~~~v~r~~~~~~~~-----~~~d~ 123 (463)
T 2wg3_C 73 SLAFHPNYKKNGKLYVSYTTNQERWA----------------------I--GPHDHILRVVEYTVSRKNP-----HQVDL 123 (463)
T ss_dssp EEEECTTHHHHCEEEEEEEECCCSSC----------------------S--SSSCEEEEEEEEEBCTTCT-----TSBCG
T ss_pred eeEeCCCCcCCCEEEEEEeCCCCCcc----------------------c--CCcccceEEEEEEEcCCCC-----CccCC
Confidence 99999999999999999997533211 0 1123357999999864311 13445
Q ss_pred CCeEEEEEecCCCCCccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCc
Q 005466 356 SEVRRIFTMGLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSY 435 (695)
Q Consensus 356 ~e~~~Il~~~~P~~~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~Y 435 (695)
.++++|+++..+...|+|++|+|+| ||+|||++||+++..|+..++|++++++|||||||+|+. +.+++|
T Consensus 124 ~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~---------~~~~~y 193 (463)
T 2wg3_C 124 RTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTD---------MCNVPY 193 (463)
T ss_dssp GGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCC---------CSSCSC
T ss_pred CCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCC---------cccccC
Confidence 5678888865567789999999999 999999999998776666689999999999999999994 234799
Q ss_pred CCCCCCCCCCCCCCCCeEEEeccccceeeeecCCCCC-----eEEEEEc-cCC-CceeEEEeecCCCCCcccccCCCcCC
Q 005466 436 SIPKDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPS-----YFMCADV-GQD-VYEEVDIITRGGNYGWRLYEGPYLFT 508 (695)
Q Consensus 436 sIP~DNPF~~~~~~~pEI~A~GlRNP~r~sfD~~~g~-----~l~~~Dv-G~d-~~EEIn~I~kG~NYGWp~~eG~~~~~ 508 (695)
+||+||||++.+++++||||+||||||||+||+.|++ .+|++|+ |++ ..||||+|++|+||||+
T Consensus 194 ~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~ei~~i~~G~~yG~~--------- 264 (463)
T 2wg3_C 194 SIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDSNGKNRSSARILQIIKGKDYESE--------- 264 (463)
T ss_dssp BCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEECC------CEEEEEEC----CCSC---------
T ss_pred cCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEecccCCCCCCCCeEeeeccCCCCCCC---------
Confidence 9999999999999999999999999999999999762 5788999 665 47999999999999993
Q ss_pred CCCCCCCCCCCCCCCCCCceeeccCCccCCCCCCcccccceeecCCCCCcccCcEEEEEeccceeEEeecCCCCCCCeeE
Q 005466 509 PLETPGGITPLNSVSPIFPVLGYNHSEVNKKEGSASITGGYFYRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTT 588 (695)
Q Consensus 509 p~~~p~~~t~~~~~~~i~Pi~~y~H~~~~~~~Gs~S~tGg~vYrG~~fP~l~G~yifgD~~sg~lw~l~~~p~~sG~~~~ 588 (695)
.|++.|.|+ .| .||+|++||+|++||+|+|.||++|+. ++||.+.+++.+ +.|..
T Consensus 265 -----------------~P~~~~~~~-----~g-~Ap~G~~~Y~G~~fP~~~g~~f~~~~~-g~i~~~~~~~~~-~~~~~ 319 (463)
T 2wg3_C 265 -----------------PSLLEFKPF-----SN-GPLVGGFVYRGCQSERLYGSYVFGDRN-GNFLTLQQSPVT-KQWQE 319 (463)
T ss_dssp -----------------CCCEECCC----------CEEEEEECCCSSCTTTTTCEEEEETT-SCEEEEEC------CCEE
T ss_pred -----------------CCeEEeeCC-----CC-ccccceEEEeCCCChhhcceEEEecCC-CcEEEEEeCCCC-ceeeE
Confidence 489999874 33 899999999999999999999999996 899999876542 34544
Q ss_pred EEeeeecCCCCcccccccCCCCCCCCCccceEEEcCCCcEEEEeC---------CeEEEEecCCCC
Q 005466 589 SKIPFSCARDSPIQCKVLPGNDLPSLGYIYSFGEDNRKDIFILTS---------DGVYRVVRPSRC 645 (695)
Q Consensus 589 ~~i~f~c~~~~P~~c~~~~g~~~~~~gri~sf~ed~dGeLYvlts---------~gIYRIv~ps~c 645 (695)
..+ +.++. ..+. ...++||++|++|+||+|||+++ ++||||++|+++
T Consensus 320 ~~~---~~g~~-~~~~------~~~~~r~~~v~~~pdG~Lyv~~~~~~~~~~~~G~I~Ri~~p~~~ 375 (463)
T 2wg3_C 320 KPL---CLGTS-GSCR------GYFSGHILGFGEDELGEVYILSSSKSMTQTHNGKLYKIVDPKRP 375 (463)
T ss_dssp EEE---CEEET-TSSC------SCCCSEEEEEEECTTCCEEEEEESSCGGGCSSEEEEEEECTTSC
T ss_pred EEe---ecCCc-cccc------ccccCcceEEEECCCCCEEEEeccCCcccCCCCcEEEecCcccc
Confidence 333 11111 1111 12368999999999999999995 359999998875
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 695 | ||||
| d1crua_ | 450 | b.68.2.1 (A:) Soluble quinoprotein glucose dehydro | 7e-20 |
| >d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 450 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Soluble quinoprotein glucose dehydrogenase family: Soluble quinoprotein glucose dehydrogenase domain: Soluble quinoprotein glucose dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Score = 90.9 bits (224), Expect = 7e-20
Identities = 76/365 (20%), Positives = 123/365 (33%), Gaps = 51/365 (13%)
Query: 218 MVAHPDGSNRAFFSNQE-GKIWLATIPEQGLGETMELDASSPFADLTDEVHF-DTEFGLM 275
++ PD + + + + GKI PE G + + + V+ D + GL+
Sbjct: 32 LLWGPDN--QIWLTERATGKILRVN-PESG--------SVKTVFQVPEIVNDADGQNGLL 80
Query: 276 GMAFHPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVV 335
G AFHP+F N + S K P + N QT++
Sbjct: 81 GFAFHPDFKNNPYIYISGTF---KNPKSTDKELPN---------------------QTII 116
Query: 336 AEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGHHGGQLLFGPTDGYMYFMMGDGGGT 395
YT N + + + S H G+L+ GP D +Y+ +GD G
Sbjct: 117 RRYTYNKST--------DTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIGDQGRN 167
Query: 396 ADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIWA 455
Y F N+ L+ + L L SIPKDNP +G+ I+
Sbjct: 168 QLAYLFLPNQAQHTPTQQELN-GKDYHTYMGKVLRLNLDGSIPKDNPS--FNGVVSHIYT 224
Query: 456 LGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYGWRLYEGPYLFTPLETPGG 515
LG RNP +F + + ++ G + +E+++I +GGNYGW G +
Sbjct: 225 LGHRNPQGLAFTPNG--KLLQSEQGPNSDDEINLIVKGGNYGWPNVAGYKDDSGYAYANY 282
Query: 516 ITPLNSVSPIFPVLGYNHSEVNKKEGSASITGGYFYRSMTDPCMFGRYLYADLYATALWA 575
N G + + TG F + +
Sbjct: 283 SAAANKSIKDLAQNGVKVAAGVPVTKESEWTGKNFVPPLKTLYTVQDTYNYNDPTCGEMT 342
Query: 576 ASESP 580
P
Sbjct: 343 YICWP 347
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 695 | |||
| d1crua_ | 450 | Soluble quinoprotein glucose dehydrogenase {Acinet | 100.0 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 98.91 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 98.88 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.3 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 98.12 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 97.86 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 97.78 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 97.71 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 97.46 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 97.44 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 97.43 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 97.08 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 97.04 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 96.76 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 96.72 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 96.71 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 96.3 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 96.19 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 95.87 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 93.11 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 93.07 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 92.89 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 91.38 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 90.56 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 89.92 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 89.43 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 85.05 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 82.19 |
| >d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Soluble quinoprotein glucose dehydrogenase family: Soluble quinoprotein glucose dehydrogenase domain: Soluble quinoprotein glucose dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=100.00 E-value=5.6e-57 Score=496.48 Aligned_cols=354 Identities=24% Similarity=0.387 Sum_probs=255.9
Q ss_pred CCCcEEEEEecCce--eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCce-eeCCCCceeee
Q 005466 202 PQGLCLEKIGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEV-HFDTEFGLMGM 277 (695)
Q Consensus 202 p~G~~le~va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V-~~~~E~GLLGi 277 (695)
.++|++|+|++||. |+|+|.||| ||||+|| .|+|++++ ++++..+.+ .++...+ ...+|+|||||
T Consensus 14 ~~~f~~~~ia~~L~~P~~la~~pdg--~llVter~~G~i~~v~-~~~g~~~~i--------~~~~~~~~~~~ge~GLLgi 82 (450)
T d1crua_ 14 SENFDKKVILSNLNKPHALLWGPDN--QIWLTERATGKILRVN-PESGSVKTV--------FQVPEIVNDADGQNGLLGF 82 (450)
T ss_dssp CTTSCEEEEECCCSSEEEEEECTTS--CEEEEETTTCEEEEEC-TTTCCEEEE--------EECTTCCCCTTSSCSEEEE
T ss_pred cCCcEEEEEECCCCCceEEEEeCCC--eEEEEEecCCEEEEEE-CCCCcEeec--------ccCCccccccCCCCceeeE
Confidence 45899999999998 999999999 8999998 69999985 444432222 2332222 35789999999
Q ss_pred eeCCCCCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCC
Q 005466 278 AFHPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSE 357 (695)
Q Consensus 278 AfhPdF~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e 357 (695)
||||+|++|++||++|+....+.. .. ......+|+|++.+.... ....
T Consensus 83 a~~Pdf~~n~~iYvsyt~~~~~~~---~~---------------------~~~~~~~v~~~~~~~~~~--------~~~~ 130 (450)
T d1crua_ 83 AFHPDFKNNPYIYISGTFKNPKST---DK---------------------ELPNQTIIRRYTYNKSTD--------TLEK 130 (450)
T ss_dssp EECTTTTTSCEEEEEEEEECTTC-----C---------------------CSCEEEEEEEEEEETTTT--------EEEE
T ss_pred EeCCCCccCCEEEEEEecCCCCCc---cc---------------------ccccceEEEeeecccccc--------cccc
Confidence 999999999999999997643311 00 001246788888765421 1223
Q ss_pred eEEEEEecCC-CCCccccceEEcCCCCeEEEEecCCCCCCCcc---------------CccccCCCCCeeEEEEecCCCC
Q 005466 358 VRRIFTMGLS-FNGHHGGQLLFGPTDGYMYFMMGDGGGTADPY---------------NFSQNKKSLLGKITRLDVDNIP 421 (695)
Q Consensus 358 ~~~Il~~~~P-~~~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~---------------~~aQn~ssl~GKILRIdvDg~p 421 (695)
.++|++ .+| ...|+||+|+|+| ||+|||++||.++...+. ..+||++++.||||||++|+
T Consensus 131 ~~~i~~-~~p~~~~H~gg~l~fgp-DG~LYvs~Gd~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~Gkilri~~dg-- 206 (450)
T d1crua_ 131 PVDLLA-GLPSSKDHQSGRLVIGP-DQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDG-- 206 (450)
T ss_dssp EEEEEE-EECCCSSCCEEEEEECT-TSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTS--
T ss_pred eEEEee-cccccccccccceeEcC-CCCEEEEecCCCcccccccccccccccCcccccccccccccccCceEEeeccc--
Confidence 445554 444 4679999999999 999999999988753321 24699999999999999998
Q ss_pred chhhhhhcccCCCcCCCCCCCCCCCCCCCCeEEEeccccceeeeecCCCCCeEEEEEccCCCceeEEEeecCCCCCcccc
Q 005466 422 SAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYGWRLY 501 (695)
Q Consensus 422 ~~~~~~~~g~~g~YsIP~DNPF~~~~~~~pEI~A~GlRNP~r~sfD~~~g~~l~~~DvG~d~~EEIn~I~kG~NYGWp~~ 501 (695)
++|+||||.+ +.++||||+||||||||+||+ ++ +||++|||++.+||||+|++|+|||||++
T Consensus 207 --------------~~~~dnP~~~--~~~~ei~a~G~RNp~g~~~~p-~g-~l~~~e~G~~~~dEln~i~~G~nYGWP~~ 268 (450)
T d1crua_ 207 --------------SIPKDNPSFN--GVVSHIYTLGHRNPQGLAFTP-NG-KLLQSEQGPNSDDEINLIVKGGNYGWPNV 268 (450)
T ss_dssp --------------CCCTTCCEET--TEECSEEEBCCSEEEEEEECT-TS-CEEEEEECSSSCEEEEECCTTCBCCTTTC
T ss_pred --------------cccccccccc--cccceEEEeccccccceeecc-cc-eeeeccccccccccccccccccccCCcee
Confidence 7999999985 467899999999999999999 56 59999999999999999999999999999
Q ss_pred cCCCcCCCCCC-----------CCCCCC---------------CCCCCCCCceeeccCCc----cC---------CCCCC
Q 005466 502 EGPYLFTPLET-----------PGGITP---------------LNSVSPIFPVLGYNHSE----VN---------KKEGS 542 (695)
Q Consensus 502 eG~~~~~p~~~-----------p~~~t~---------------~~~~~~i~Pi~~y~H~~----~~---------~~~Gs 542 (695)
||...+++... +..... -.+..+.+|+....... .+ .-.++
T Consensus 269 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ps 348 (450)
T d1crua_ 269 AGYKDDSGYAYANYSAAANKSIKDLAQNGVKVAAGVPVTKESEWTGKNFVPPLKTLYTVQDTYNYNDPTCGEMTYICWPT 348 (450)
T ss_dssp SSSSSCSSCCEECGGGSSCTTCCCCCSTTSSCCTTCCEECGGGCCCSSBCCCSEEECCCCTTCCSCCGGGTTCGGGGSSC
T ss_pred cCCcCCCCcccCCcccccccccccccccccccccCCCcccccccccccccccccccccccccccccccccCCCceeeccc
Confidence 98765432100 000000 00011223322211000 00 01356
Q ss_pred cccccceeecCCC--CCcccCcEEEEEeccceeEEeecCCCCCCCeeEEEeeeecCCCCcccccccCCCCCCCCCccceE
Q 005466 543 ASITGGYFYRSMT--DPCMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARDSPIQCKVLPGNDLPSLGYIYSF 620 (695)
Q Consensus 543 ~S~tGg~vYrG~~--fP~l~G~yifgD~~sg~lw~l~~~p~~sG~~~~~~i~f~c~~~~P~~c~~~~g~~~~~~gri~sf 620 (695)
.|++|+.||+|.+ ||+|+|.+|+++|..++|+.+..++++.. .....+.+ ....+||+++
T Consensus 349 iapsg~~fY~g~~~~fp~~~g~lfvg~l~~~~i~~v~~~~~~~~-~~~~~~~~-----------------~~~~~R~rdv 410 (450)
T d1crua_ 349 VAPSSAYVYKGGKKAITGWENTLLVPSLKRGVIFRIKLDPTYST-TYDDAVPM-----------------FKSNNRYRDV 410 (450)
T ss_dssp CCBCCCEECCCCTTCCTTCTTEEEEEBSSSCCEEEEEECTTSSS-EEEEEEEE-----------------SCCSSCEEEE
T ss_pred ccCccceEecCCcccCcccCCCEEEEECcCCEEEEEEEcCCCce-eeEEEEec-----------------cCCCCCceEE
Confidence 7999999999974 99999999999999999999988765432 22222211 1235899999
Q ss_pred EEcCCCc-EEEEeCC--eEEE
Q 005466 621 GEDNRKD-IFILTSD--GVYR 638 (695)
Q Consensus 621 ~ed~dGe-LYvlts~--gIYR 638 (695)
+++|||+ |||++++ .|||
T Consensus 411 ~~gpDGs~lyv~~d~~G~i~r 431 (450)
T d1crua_ 411 IASPDGNVLYVLTDTAGNVQK 431 (450)
T ss_dssp EECTTSSCEEEEECSSCCEEC
T ss_pred EECCCCCEEEEEECCCCCEec
Confidence 9999998 7898863 4877
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|