Citrus Sinensis ID: 005541
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 691 | ||||||
| 359487562 | 946 | PREDICTED: uncharacterized protein LOC10 | 0.989 | 0.723 | 0.714 | 0.0 | |
| 255542696 | 923 | transcription factor, putative [Ricinus | 0.966 | 0.723 | 0.717 | 0.0 | |
| 224123112 | 973 | predicted protein [Populus trichocarpa] | 0.978 | 0.694 | 0.657 | 0.0 | |
| 224123790 | 979 | predicted protein [Populus trichocarpa] | 0.972 | 0.686 | 0.657 | 0.0 | |
| 356574955 | 923 | PREDICTED: uncharacterized protein LOC10 | 0.968 | 0.724 | 0.673 | 0.0 | |
| 356535073 | 941 | PREDICTED: uncharacterized protein LOC10 | 0.971 | 0.713 | 0.670 | 0.0 | |
| 357441701 | 930 | PsbP-like protein [Medicago truncatula] | 0.962 | 0.715 | 0.661 | 0.0 | |
| 449523029 | 936 | PREDICTED: uncharacterized protein LOC10 | 0.994 | 0.733 | 0.612 | 0.0 | |
| 449454087 | 931 | PREDICTED: uncharacterized protein LOC10 | 0.994 | 0.737 | 0.612 | 0.0 | |
| 30680933 | 930 | WRC, zf-4CXXC-R1 transcription factor an | 0.937 | 0.696 | 0.579 | 0.0 |
| >gi|359487562|ref|XP_002279731.2| PREDICTED: uncharacterized protein LOC100249389 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1021 bits (2640), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/696 (71%), Positives = 567/696 (81%), Gaps = 12/696 (1%)
Query: 1 MIKVRIREIPVLDKLQHLYCLLSAVLPVVKQIHQIQCSEVELEKKLRGNEIDLARAKLSA 60
+IKVRIREIPV DKLQ+L+ LLS+VLP VKQIH QC+E+EL+K+L G I L R +L+
Sbjct: 258 LIKVRIREIPVQDKLQYLHSLLSSVLPEVKQIHHEQCAELELDKRLHGASIKLERQRLNN 317
Query: 61 DEQMCCNICRIPIIDYHRHCGNCMYDLCLSCCQDLREASTSVGKEEFSENDRIQDTENAS 120
DEQMCCN CR+PIIDYHRHC NC YDLCL+CCQDLREAS K E +E E S
Sbjct: 318 DEQMCCNFCRVPIIDYHRHCMNCSYDLCLNCCQDLREASMLGTKGEAAEK------ETLS 371
Query: 121 EQVKTSKLRLNLLEKFPGWKANNDGSIPCPPNEYGGCGYRSLNLSRIFKMNWVAKLVKNV 180
EQVK +KL+LNL +KFP WK N+DGSIPCPP +YGGCG+ SL L+RIFKMNWVAKLVKNV
Sbjct: 372 EQVKPTKLKLNLADKFPAWKGNDDGSIPCPPKDYGGCGFSSLTLTRIFKMNWVAKLVKNV 431
Query: 181 EEMVSGCKVCDSETLLNTGSYDHSLCQYAHREDRDGNFLYCPSSHDIRSEGIGNFRKHWV 240
EEMV+GCKV D + T S + CQ AHRED D NFLYCPSS DI++EGIGNFRKHW+
Sbjct: 432 EEMVTGCKVYDINSPQKTRSSNR-FCQSAHREDSDDNFLYCPSSQDIKTEGIGNFRKHWI 490
Query: 241 KGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEVDIELGE 300
+GEPVIVKQVCD SS+S WDP IWRGIRET+DEKTKD+NR VKAIDCLDWSEVDIELG+
Sbjct: 491 RGEPVIVKQVCDDSSISNWDPSVIWRGIRETSDEKTKDDNRTVKAIDCLDWSEVDIELGQ 550
Query: 301 FIKGYSEGRVREDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYIHSRLGFLNV 360
FIKGYSEGR+R+DGWPEMLKLKDWPSPSASEE LLY +PEFISK+PLLEYIHS+ G LNV
Sbjct: 551 FIKGYSEGRLRDDGWPEMLKLKDWPSPSASEELLLYQRPEFISKMPLLEYIHSKWGLLNV 610
Query: 361 AAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHMGEVKLPTTED 420
AAKLPHYSLQNDVGP I++SYGTYEEL G+SV NLH M DMVYLLVH EVKL ++
Sbjct: 611 AAKLPHYSLQNDVGPNIFISYGTYEELGSGDSVTNLHLEMRDMVYLLVHTSEVKLKGRQE 670
Query: 421 EKIQS---SSRESEVNESVGDPEKVSGEGSFPDLSLGGHDVNNEHVEKSATDEDEIMEDQ 477
EKI+ +S ESE ES GD + EG PDLSLGGHD +H EK D+DE MEDQ
Sbjct: 671 EKIEKGKEASMESEAKESPGDVQTSLDEGRTPDLSLGGHDQQGDHGEKLNNDKDEEMEDQ 730
Query: 478 GVETGTA-EEKTVKSERLNG-YSDVSEKTHPGAHWDVFRRQDVPKLIEYLREHWTDFGRP 535
G++T ++ E KTV E L+ D+S+ THPGA WDVFRRQDVPKLIEYL+ HW +FG+P
Sbjct: 731 GIDTTSSVEAKTVNCENLHSDNGDISQITHPGALWDVFRRQDVPKLIEYLQIHWEEFGKP 790
Query: 536 DGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQ 595
T D V HPLY E ++LN HK +LKEEFGVEPWSFEQHLG+A+FIPAGCPFQ RNLQ
Sbjct: 791 TSATTDSVQHPLYDEAIFLNRHHKTQLKEEFGVEPWSFEQHLGQAIFIPAGCPFQSRNLQ 850
Query: 596 STVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLYAASSAIKEVQKLV 655
STVQLGLDFL PES+GEAVRLA+EIRCLP +HEAK QVLEVGKISLYAASSAIKEVQKLV
Sbjct: 851 STVQLGLDFLSPESLGEAVRLADEIRCLPTEHEAKRQVLEVGKISLYAASSAIKEVQKLV 910
Query: 656 LDPKLGAELGFEDPNLTATVSENLENLMKHKQITCA 691
LDPKLG ELGFEDPNLT+ VSENLE +++ +Q+TCA
Sbjct: 911 LDPKLGPELGFEDPNLTSLVSENLEKMIRRRQVTCA 946
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255542696|ref|XP_002512411.1| transcription factor, putative [Ricinus communis] gi|223548372|gb|EEF49863.1| transcription factor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|224123112|ref|XP_002318998.1| predicted protein [Populus trichocarpa] gi|222857374|gb|EEE94921.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224123790|ref|XP_002330209.1| predicted protein [Populus trichocarpa] gi|222871665|gb|EEF08796.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356574955|ref|XP_003555608.1| PREDICTED: uncharacterized protein LOC100792166 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356535073|ref|XP_003536073.1| PREDICTED: uncharacterized protein LOC100801287 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|357441701|ref|XP_003591128.1| PsbP-like protein [Medicago truncatula] gi|355480176|gb|AES61379.1| PsbP-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|449523029|ref|XP_004168527.1| PREDICTED: uncharacterized protein LOC101227379 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449454087|ref|XP_004144787.1| PREDICTED: uncharacterized protein LOC101213201 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|30680933|ref|NP_172380.2| WRC, zf-4CXXC-R1 transcription factor and jumonji domain-containing protein [Arabidopsis thaliana] gi|42571415|ref|NP_973798.1| WRC, zf-4CXXC-R1 transcription factor and jumonji domain-containing protein [Arabidopsis thaliana] gi|222423917|dbj|BAH19922.1| AT1G09060 [Arabidopsis thaliana] gi|332190267|gb|AEE28388.1| WRC, zf-4CXXC-R1 transcription factor and jumonji domain-containing protein [Arabidopsis thaliana] gi|332190268|gb|AEE28389.1| WRC, zf-4CXXC-R1 transcription factor and jumonji domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 691 | ||||||
| TAIR|locus:2036014 | 944 | AT1G09060 "AT1G09060" [Arabido | 0.937 | 0.686 | 0.579 | 2.9e-206 | |
| TAIR|locus:2125221 | 840 | AT4G00990 "AT4G00990" [Arabido | 0.739 | 0.608 | 0.362 | 1.8e-129 | |
| TAIR|locus:2008875 | 875 | AT1G11950 "AT1G11950" [Arabido | 0.606 | 0.478 | 0.373 | 5.3e-117 | |
| TAIR|locus:2027109 | 883 | AT1G62310 "AT1G62310" [Arabido | 0.677 | 0.530 | 0.356 | 1.1e-112 | |
| TAIR|locus:2141221 | 927 | B160 "AT4G21430" [Arabidopsis | 0.745 | 0.555 | 0.335 | 1.9e-67 | |
| UNIPROTKB|F1RH75 | 1766 | KDM3B "Uncharacterized protein | 0.246 | 0.096 | 0.353 | 5.1e-41 | |
| UNIPROTKB|Q7LBC6 | 1761 | KDM3B "Lysine-specific demethy | 0.248 | 0.097 | 0.349 | 1e-40 | |
| UNIPROTKB|E1BE97 | 1759 | LOC100848816 "Uncharacterized | 0.248 | 0.097 | 0.349 | 2.1e-40 | |
| MGI|MGI:1923356 | 1562 | Kdm3b "KDM3B lysine (K)-specif | 0.248 | 0.110 | 0.354 | 3.6e-40 | |
| UNIPROTKB|F1NJZ2 | 1755 | KDM3B "Uncharacterized protein | 0.243 | 0.095 | 0.337 | 6.3e-39 |
| TAIR|locus:2036014 AT1G09060 "AT1G09060" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1995 (707.3 bits), Expect = 2.9e-206, P = 2.9e-206
Identities = 403/696 (57%), Positives = 482/696 (69%)
Query: 2 IKVRIREIPVLDKLQHLYCLLSAVLPVVKQIHQIQCSEVELEKKLRGNEIDLARAKLSAD 61
IKVRIREIPVLDKLQ+LY LLSAVLPV+KQIH QC EVELEK+LR EIDL RA+L AD
Sbjct: 282 IKVRIREIPVLDKLQYLYRLLSAVLPVIKQIHLEQCMEVELEKRLREVEIDLVRARLKAD 341
Query: 62 EQMCCNICRIPIIDYHRHCGNCMYDLCLSCCQDLREASTSVGKEEFSENDRIQDTENASE 121
EQMCCN+CRIP++DY+RHC NC YDLCL CCQDLRE S SV ++N +QD + A
Sbjct: 342 EQMCCNVCRIPVVDYYRHCPNCSYDLCLRCCQDLREES-SVTISGTNQN--VQDRKGAP- 397
Query: 122 QVKTSKLRLNLLEKFPGWKANNDGSIPCPPNEYGGCGYRSLNLSRIFKMNWVAKLVKNVE 181
KL+LN KFP W+AN DGSIPCPP EYGGCG SLNL+RIFKMNWVAKLVKN E
Sbjct: 398 -----KLKLNFSYKFPEWEANGDGSIPCPPKEYGGCGSHSLNLARIFKMNWVAKLVKNAE 452
Query: 182 EMVSGCKVCDSETLLNTGSYDHSLCQYAHREDRDGNFLYCPSSHDIRSEGIGNFRKHWVK 241
E+VSGCK+ D LLN D C++A RE+ N++Y PS I+++G+ F + W +
Sbjct: 453 EIVSGCKLSD---LLNPDMCDSRFCKFAEREESGDNYVYSPSLETIKTDGVAKFEQQWAE 509
Query: 242 GEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEVDIELGEF 301
G V VK V D SS S WDP+ IWR I E +DEK ++ + +KAI+CLD EVD+ LGEF
Sbjct: 510 GRLVTVKMVLDDSSCSRWDPETIWRDIDELSDEKLREHDPFLKAINCLDGLEVDVRLGEF 569
Query: 302 IKGYSEGRVREDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYIHSRLGFLNVA 361
+ Y +G+ +E G P + KLKDWPSPSASEEF+ Y +PEFI P LEYIH RLG LNVA
Sbjct: 570 TRAYKDGKNQETGLPLLWKLKDWPSPSASEEFIFYQRPEFIRSFPFLEYIHPRLGLLNVA 629
Query: 362 AKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHMGE------VK- 414
AKLPHYSLQND GPKIY+S GTY+E+ G+S+ +H+NM DMVYLLVH E V+
Sbjct: 630 AKLPHYSLQNDSGPKIYVSCGTYQEISAGDSLTGIHYNMRDMVYLLVHTSEETTFERVRK 689
Query: 415 ---LPTTEDEKIQXXXXXXXXXXXXGDPEKVSGEGSFPDLSLGGHDVNNEHVEKSATDED 471
+P D+K+ PE+ +G DLSLG + E + T
Sbjct: 690 TKPVPEEPDQKMSENESLLS-------PEQKLRDGELHDLSLGEASMEKNEPELALTVNP 742
Query: 472 EIMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLIEYLREHWTD 531
E + + G N S + GA WDVFRRQDVPKL YL+
Sbjct: 743 ENLTENGD---------------NMESSCTSSCAGGAQWDVFRRQDVPKLSGYLQR---T 784
Query: 532 FGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQV 591
F +PD + DFV+ PLY E ++LN HKR+L++EFGVEPW+FEQH GEA+FIPAGCPFQ+
Sbjct: 785 FQKPDNIQTDFVSRPLY-EGLFLNEHHKRQLRDEFGVEPWTFEQHRGEAIFIPAGCPFQI 843
Query: 592 RNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLYAASSAIKEV 651
NLQS +Q+ LDFL PESVGE+ RLAEEIRCLPNDHEAKLQ+LE+GKISLYAASSAIKEV
Sbjct: 844 TNLQSNIQVALDFLCPESVGESARLAEEIRCLPNDHEAKLQILEIGKISLYAASSAIKEV 903
Query: 652 QKLVLDPKLGAELGFEDPNLTATVSENLENLMKHKQ 687
QKLVLDPK GAELGFED NLT VS NL+ K Q
Sbjct: 904 QKLVLDPKFGAELGFEDSNLTKAVSHNLDEATKRPQ 939
|
|
| TAIR|locus:2125221 AT4G00990 "AT4G00990" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2008875 AT1G11950 "AT1G11950" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2027109 AT1G62310 "AT1G62310" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2141221 B160 "AT4G21430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1RH75 KDM3B "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q7LBC6 KDM3B "Lysine-specific demethylase 3B" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1BE97 LOC100848816 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1923356 Kdm3b "KDM3B lysine (K)-specific demethylase 3B" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1NJZ2 KDM3B "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 691 | |||
| pfam02373 | 114 | pfam02373, JmjC, JmjC domain, hydroxylase | 8e-09 |
| >gnl|CDD|202224 pfam02373, JmjC, JmjC domain, hydroxylase | Back alignment and domain information |
|---|
Score = 53.8 bits (130), Expect = 8e-09
Identities = 22/91 (24%), Positives = 34/91 (37%), Gaps = 5/91 (5%)
Query: 508 AHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFG 567
++ F V +I E+ F + V + +++LN K E G
Sbjct: 23 INYLHFGGPKVWYIIPS--EYAEKF---EKVLSKHNGGEQPDLLLHLNTIISPKQLLENG 77
Query: 568 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTV 598
+ + F Q GE VF G QV NL +
Sbjct: 78 IPVYRFVQKPGEFVFTFPGWYHQVFNLGFNI 108
|
The JmjC domain belongs to the Cupin superfamily. JmjC-domain proteins may be protein hydroxylases that catalyze a novel histone modification. This is confirmed to be a hydroxylase: the human JmjC protein named Tyw5p unexpectedly acts in the biosynthesis of a hypermodified nucleoside, hydroxy-wybutosine, in tRNA-Phe by catalyzing hydroxylation. Length = 114 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 691 | |||
| KOG1356 | 889 | consensus Putative transcription factor 5qNCA, con | 100.0 | |
| PF02373 | 114 | JmjC: JmjC domain, hydroxylase; InterPro: IPR01312 | 99.51 | |
| PF13621 | 251 | Cupin_8: Cupin-like domain; PDB: 3AL6_C 3AL5_C 2XU | 99.09 | |
| KOG2131 | 427 | consensus Uncharacterized conserved protein, conta | 97.8 | |
| smart00558 | 57 | JmjC A domain family that is part of the cupin met | 97.01 | |
| cd02340 | 43 | ZZ_NBR1_like Zinc finger, ZZ type. Zinc finger pre | 95.79 | |
| cd02335 | 49 | ZZ_ADA2 Zinc finger, ZZ type. Zinc finger present | 94.76 | |
| cd02249 | 46 | ZZ Zinc finger, ZZ type. Zinc finger present in dy | 94.72 | |
| cd02339 | 45 | ZZ_Mind_bomb Zinc finger, ZZ type. Zinc finger pre | 94.71 | |
| KOG2130 | 407 | consensus Phosphatidylserine-specific receptor Ptd | 94.31 | |
| PF07883 | 71 | Cupin_2: Cupin domain; InterPro: IPR013096 This fa | 93.38 | |
| COG1917 | 131 | Uncharacterized conserved protein, contains double | 92.77 | |
| cd02344 | 45 | ZZ_HERC2 Zinc finger, ZZ type. Zinc finger present | 92.61 | |
| PF00569 | 46 | ZZ: Zinc finger, ZZ type; InterPro: IPR000433 Zinc | 92.53 | |
| cd02341 | 48 | ZZ_ZZZ3 Zinc finger, ZZ type. Zinc finger present | 92.35 | |
| smart00291 | 44 | ZnF_ZZ Zinc-binding domain, present in Dystrophin, | 91.05 | |
| cd02345 | 49 | ZZ_dah Zinc finger, ZZ type. Zinc finger present i | 90.84 | |
| COG0662 | 127 | {ManC} Mannose-6-phosphate isomerase [Carbohydrate | 90.55 | |
| cd02338 | 49 | ZZ_PCMF_like Zinc finger, ZZ type. Zinc finger pre | 90.08 | |
| cd02337 | 41 | ZZ_CBP Zinc finger, ZZ type. Zinc finger present i | 89.82 | |
| TIGR03214 | 260 | ura-cupin putative allantoin catabolism protein. T | 87.64 | |
| cd02334 | 49 | ZZ_dystrophin Zinc finger, ZZ type. Zinc finger pr | 85.55 | |
| PRK09943 | 185 | DNA-binding transcriptional repressor PuuR; Provis | 84.07 | |
| cd02343 | 48 | ZZ_EF Zinc finger, ZZ type. Zinc finger present in | 83.75 | |
| PF07649 | 30 | C1_3: C1-like domain; InterPro: IPR011424 This sho | 83.3 | |
| KOG1356 | 889 | consensus Putative transcription factor 5qNCA, con | 82.39 | |
| PRK13290 | 125 | ectC L-ectoine synthase; Reviewed | 82.23 |
| >KOG1356 consensus Putative transcription factor 5qNCA, contains JmjC domain [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-167 Score=1395.32 Aligned_cols=573 Identities=32% Similarity=0.512 Sum_probs=482.5
Q ss_pred CCchhhHHHHH--HHHHHHhhhhhhhchHHhhhHHHHHhhcccccc--ccccccCcccccccCCCCcccccccccCCCCC
Q 005541 9 IPVLDKLQHLY--CLLSAVLPVVKQIHQIQCSEVELEKKLRGNEID--LARAKLSADEQMCCNICRIPIIDYHRHCGNCM 84 (691)
Q Consensus 9 i~~~~k~~~~~--~ll~~lLP~lk~i~~eQ~~E~e~Eaki~g~~~~--i~~a~~~~der~~Cd~C~tsI~D~HRsC~~Cs 84 (691)
....+++..+. |+|...+|+|+.++..|-.+.+.||+|||.... ...+..+++|++|||+|+|||.|+||+||+||
T Consensus 304 ~~~~~~~h~~r~k~~I~~~cpcl~~~~~~~~~~~~~e~~vq~~~~~~~~~~~~~~~~e~~~~~~~~~si~~l~r~cP~~s 383 (889)
T KOG1356|consen 304 LDLSDRVHAVREKFGIKAHCPCLKKQNKQQPLDAETEASVQGTEPTSKPPVTQANPEEPLYCDHCATSIGDLKRSCPDSS 383 (889)
T ss_pred hhHHHHHHHHHHHhhHHhhChhHHhhhhhccccHHHHHHHhcCCCCCCccccccCcCCCccccccccchhhccccCCCcc
Confidence 45678888888 999999999999999999999999999998533 45667777999999999999999999999999
Q ss_pred cchhhhhhHHHhhcccCCCCcccc-cc--ccccccc-chhhhhhhhhhhhccccCCCCcccCCCCCccCCCCCCCCCCCc
Q 005541 85 YDLCLSCCQDLREASTSVGKEEFS-EN--DRIQDTE-NASEQVKTSKLRLNLLEKFPGWKANNDGSIPCPPNEYGGCGYR 160 (691)
Q Consensus 85 ydLCL~CC~elR~g~~~~g~~~~~-~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~W~a~~dGsIpCppke~ggCg~~ 160 (691)
|.+||.||++||+|.+..+.+... +. +..+..+ ...+....+.. .... +. ++++||+.|-|...+||+..
T Consensus 384 ~~~~l~~~~~i~~g~l~~~~e~~~~~~~r~~~~~~g~~~~~~~~~s~~---~~~~-~~--~~~ng~~r~l~~~~~g~~~~ 457 (889)
T KOG1356|consen 384 YAICLPWLADLRRGDLKEKEECELMLRSRGVKYEHGPDPIEPSLSSVS---VDEP-SS--ANENGSLRDLLLSLAGCLDR 457 (889)
T ss_pred ccccchHHHHhhcCCcccchhHHHHHHHHHHHhhcCccccccccCCCC---CCCC-cc--cccccchhhcccccCccchh
Confidence 999999999999998766553221 11 1100000 00000000000 0001 12 88899999999999999999
Q ss_pred ccccccccccchHHHHHHHHHHHHhcCCCccCCccc-CCCCCCcccccccccCCCCCCceeccCccccccccHHHHHHhh
Q 005541 161 SLNLSRIFKMNWVAKLVKNVEEMVSGCKVCDSETLL-NTGSYDHSLCQYAHREDRDGNFLYCPSSHDIRSEGIGNFRKHW 239 (691)
Q Consensus 161 ~L~L~~if~~~~is~L~~~aee~~~~c~~~~~~~~~-~~~~~~~~~~~aa~re~s~dn~lYcP~~~d~~~~~l~hFQ~hW 239 (691)
.|.|+|++|..|.+.|+..||.-+...-..-..... .+....+.++++|.|+.+.|||||||.+.+++.+||.|||+||
T Consensus 458 ~l~lkr~lpn~~~s~i~~~vE~k~~~~~~~~~l~~~~~~~~~~~~~~s~~~~~~~cdn~Ll~l~~d~~~~~n~~~FQEhW 537 (889)
T KOG1356|consen 458 GLKLKRILPNILDSIIASVVENKLTSKLSKPPLRLCRSSQDGSGLLLSAASHSWLCDNRLLSLKVDPLNQNNLKHFQEHW 537 (889)
T ss_pred hhhhhhcCchHHHHHHHHHHHhhcccccCCchhhcCccccccccCccccCCCCcCCCCceecCccCccchhHHHHHHHHH
Confidence 999999999999999999999988641111111111 1111223578999999999999999999899999999999999
Q ss_pred hcCCCEEEecccccCCCCCCChhhhhhhhhhhcccccccccCceeEEeCCCCCeeecchhhhccccCCCcccCCCCceee
Q 005541 240 VKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEVDIELGEFIKGYSEGRVREDGWPEML 319 (691)
Q Consensus 240 ~kGePVIVr~Vl~~~s~lsW~P~~mwr~~~e~~~~~~~~~~~~v~aidCl~~~ev~i~i~~Ff~Gy~~gr~~~~g~p~mL 319 (691)
++|||||||||++++++++|+||+|||+|++.-..-..-.+.++.++||++ ++.+||.||++|+++++|||+||
T Consensus 538 kqGqPViVs~V~~~l~g~lW~P~a~~~~~g~q~~~l~n~~~~~i~s~d~~~------~fwegFe~~~kr~~~~~g~p~vL 611 (889)
T KOG1356|consen 538 KQGQPVIVSGVHKKLNGLLWKPEALSRAFGDQVVDLSNCNNSQIISNDCVD------NFWEGFEGYSKRLKSENGWPEVL 611 (889)
T ss_pred hcCCcEEehHhhhhccccccchHHHHHHhccchhhhhcCCCCCccccchhh------hHHHhhcccccCcccccCCeeEE
Confidence 999999999999999999999999999998865433333455566777776 68999999999999999999999
Q ss_pred eecCCCCcchhHHhhhccchHHHhcCCcccccCCCCccchhcccCCCCCCCCCCCCcccccccccccccCCCCcceeeee
Q 005541 320 KLKDWPSPSASEEFLLYHKPEFISKLPLLEYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFN 399 (691)
Q Consensus 320 KLKDWPps~~Fee~lP~h~~efi~~LP~~EYt~pr~G~LNLAskLP~~~lkPDLGPK~YIAYG~~eelGrGdSvTkLH~D 399 (691)
|||||||+++|+++||+||+|||++|||||||| |+|+||||++||.+|++||||||||||||+++++||||||||||||
T Consensus 612 KLKDWpp~~~Fkd~lP~r~eell~sLPlpEYt~-r~G~LNlAs~LP~~fv~PDLGPk~y~AYG~~~e~gr~~gtTnLH~d 690 (889)
T KOG1356|consen 612 KLKDWPPGEDFKDMLPRRFEELLASLPLPEYTD-RDGKLNLASKLPEGFVRPDLGPKLYNAYGVSTELGRGDGTTNLHLD 690 (889)
T ss_pred eecCCCchHhHhhhhhHHHHHHHHcCCchhhhc-CCCccchHhhCcccccCCCCCchhhhhccccccccCCCCceeecee
Confidence 999999999999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred cccccchhhccccccCCCchhhHhhhccccccccccCCCCCccCCCCCCCCCCCCCCCCCcccccccccchhhhhhhcCc
Q 005541 400 MPDMVYLLVHMGEVKLPTTEDEKIQSSSRESEVNESVGDPEKVSGEGSFPDLSLGGHDVNNEHVEKSATDEDEIMEDQGV 479 (691)
Q Consensus 400 mSDAVNIL~h~~ev~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~ 479 (691)
|||||||||||++++.... .|++++++... |++.++..
T Consensus 691 vSDaVNILvyv~e~~~~~~---~~~~~~k~~~~-------------~~~de~~~-------------------------- 728 (889)
T KOG1356|consen 691 VSDAVNILVYVGEPPGQIE---QIAKVLKKIQE-------------GDLDEITR-------------------------- 728 (889)
T ss_pred hhhhhhheeeeccCCchHH---hHHHHHHhhhh-------------cchhhhhh--------------------------
Confidence 9999999999999987444 44444332221 11111100
Q ss_pred ccccccccccccccccCCCCCCCCCCCceeEEEecCCChHHHHHHHHHHHhhcCCCCCCCCCcccCCCCCcceeeCHHHH
Q 005541 480 ETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHK 559 (691)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GAlWdIFrreDv~KLreyL~kh~~Ef~~~~~~~~~~v~hPIHDQ~fYLt~~hk 559 (691)
.+. .+..+.+||||||||||||||||+||+||++||||. +.+|+||||||+||||.+||
T Consensus 729 ------------~~~-----~~~~e~~GALWhIF~~~Dv~KireyL~k~~~E~~~~----~~~v~hPIhDQS~YLd~~lr 787 (889)
T KOG1356|consen 729 ------------SRI-----SSVSETPGALWHIFRAQDVPKIREYLRKVCKEQGHE----VPKVHHPIHDQSWYLDRYLR 787 (889)
T ss_pred ------------hhc-----cccccCCcchhhhhhhcchHHHHHHHHHhhHHhcCC----CCcccCCCcccceeccHHHH
Confidence 000 034578999999999999999999999999999994 34589999999999999999
Q ss_pred HHHHHHhCceeeEEEeecCceEEecCCCccccccccccceeeccccCCcCHHHHHHHHHHHhcCCCchhhhhhhhhhhhH
Q 005541 560 RKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKI 639 (691)
Q Consensus 560 ~kLkeEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ec~rLteEfR~Lp~~H~~K~d~Levkkm 639 (691)
+|||||||||||||+|+||||||||||||||||||+||||||+||||||||.||+|||+|||+||++|.+++||||||+|
T Consensus 788 ~RLkeEyGVe~WtfvQ~LGdAVfIPAGaPHQVrNLkSCikVa~DFVSPE~v~ec~rLT~EfR~Lp~~h~~~eDKLqvK~m 867 (889)
T KOG1356|consen 788 RRLKEEYGVEPWTFVQFLGDAVFIPAGAPHQVRNLKSCIKVAEDFVSPEHVSECFRLTQEFRQLPQNHKNHEDKLQVKNM 867 (889)
T ss_pred HHHHHHhCCCccchhhcccceEEecCCCcHHhhhhhhHHHHHHhhCChhhHHHHHHHHHHHhhCCCcccchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccC
Q 005541 640 SLYAASSAIKEVQKLVLD 657 (691)
Q Consensus 640 ~lya~~~avke~~~l~~~ 657 (691)
++||+..||++|+.+..+
T Consensus 868 i~hAVk~Av~~L~~~~s~ 885 (889)
T KOG1356|consen 868 IYHAVKDAVGTLKEAESS 885 (889)
T ss_pred HHHHHHHHHHHHHHhhcc
Confidence 999999999999987653
|
|
| >PF02373 JmjC: JmjC domain, hydroxylase; InterPro: IPR013129 Jumonji protein is required for neural tube formation in mice [] | Back alignment and domain information |
|---|
| >PF13621 Cupin_8: Cupin-like domain; PDB: 3AL6_C 3AL5_C 2XUM_A 2Y0I_A 1MZE_A 3KCY_A 1MZF_A 1YCI_A 2ILM_A 1H2L_A | Back alignment and domain information |
|---|
| >KOG2131 consensus Uncharacterized conserved protein, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >smart00558 JmjC A domain family that is part of the cupin metalloenzyme superfamily | Back alignment and domain information |
|---|
| >cd02340 ZZ_NBR1_like Zinc finger, ZZ type | Back alignment and domain information |
|---|
| >cd02335 ZZ_ADA2 Zinc finger, ZZ type | Back alignment and domain information |
|---|
| >cd02249 ZZ Zinc finger, ZZ type | Back alignment and domain information |
|---|
| >cd02339 ZZ_Mind_bomb Zinc finger, ZZ type | Back alignment and domain information |
|---|
| >KOG2130 consensus Phosphatidylserine-specific receptor PtdSerR, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF07883 Cupin_2: Cupin domain; InterPro: IPR013096 This family represents the conserved barrel domain of the cupin superfamily [] (cupa is the Latin term for a small barrel) | Back alignment and domain information |
|---|
| >COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown] | Back alignment and domain information |
|---|
| >cd02344 ZZ_HERC2 Zinc finger, ZZ type | Back alignment and domain information |
|---|
| >PF00569 ZZ: Zinc finger, ZZ type; InterPro: IPR000433 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >cd02341 ZZ_ZZZ3 Zinc finger, ZZ type | Back alignment and domain information |
|---|
| >smart00291 ZnF_ZZ Zinc-binding domain, present in Dystrophin, CREB-binding protein | Back alignment and domain information |
|---|
| >cd02345 ZZ_dah Zinc finger, ZZ type | Back alignment and domain information |
|---|
| >COG0662 {ManC} Mannose-6-phosphate isomerase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd02338 ZZ_PCMF_like Zinc finger, ZZ type | Back alignment and domain information |
|---|
| >cd02337 ZZ_CBP Zinc finger, ZZ type | Back alignment and domain information |
|---|
| >TIGR03214 ura-cupin putative allantoin catabolism protein | Back alignment and domain information |
|---|
| >cd02334 ZZ_dystrophin Zinc finger, ZZ type | Back alignment and domain information |
|---|
| >PRK09943 DNA-binding transcriptional repressor PuuR; Provisional | Back alignment and domain information |
|---|
| >cd02343 ZZ_EF Zinc finger, ZZ type | Back alignment and domain information |
|---|
| >PF07649 C1_3: C1-like domain; InterPro: IPR011424 This short domain is rich in cysteines and histidines | Back alignment and domain information |
|---|
| >KOG1356 consensus Putative transcription factor 5qNCA, contains JmjC domain [Transcription] | Back alignment and domain information |
|---|
| >PRK13290 ectC L-ectoine synthase; Reviewed | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 691 | ||||
| 2ypd_A | 392 | Crystal Structure Of The Jumonji Domain Of Human Ju | 1e-13 |
| >pdb|2YPD|A Chain A, Crystal Structure Of The Jumonji Domain Of Human Jumonji Domain Containing 1c Protein Length = 392 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 691 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.9 bits (126), Expect = 3e-07
Identities = 87/642 (13%), Positives = 185/642 (28%), Gaps = 184/642 (28%)
Query: 91 CCQDLREASTSVGKEEFSENDRIQDTENASEQVKTSK---------------LRL----- 130
+D+ SV ++ F +N +D ++ + + + + LRL
Sbjct: 17 QYKDI----LSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLL 72
Query: 131 ----NLLEKFPG--------W------KANNDGSIPCPPNEYGGCGYRSLNLSRIF-KMN 171
+++KF + S+ Y R N +++F K N
Sbjct: 73 SKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSM--MTRMYIEQRDRLYNDNQVFAKYN 130
Query: 172 -WVAKLVKNVEEMVS--------------GC-K------VCDSETL----------LNTG 199
+ + + + G K VC S + LN
Sbjct: 131 VSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLK 190
Query: 200 SYD---------HSLCQYAHREDRDGNFLYCPSSHDIRSEGIGNFRKHWVKGEP-VIVKQ 249
+ + L ++ D + S +I+ R H ++ E ++K
Sbjct: 191 NCNSPETVLEMLQKLL---YQIDPNWTSR-SDHSSNIK------LRIHSIQAELRRLLKS 240
Query: 250 VCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAID--C--LDWSEV---DIELGEFI 302
+ + + ++ + A + C L + ++ +F+
Sbjct: 241 KPYENCLLVLL--NVQ-------------NAKAWNAFNLSCKIL----LTTRFKQVTDFL 281
Query: 303 KGYSEGRVREDGWPEMLKLKDWPSPSASEEFL---LYHKPEFISKLPLLEYIHSRLGFLN 359
+ + D L +P + L L +P+ LP +
Sbjct: 282 SAATTTHISLDHHSMTL------TPDEVKSLLLKYLDCRPQ---DLPREVLTTNPRRLSI 332
Query: 360 VAAKLPHYSLQNDVGPKIYMSYGTYEELDR--GNSVKNLHFNMPDMVY--LLVHMGEVKL 415
+A + D + ++L +S+ L ++ L V +
Sbjct: 333 IAESIRDGLATWD-----NWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHI 387
Query: 416 PTTEDEKIQSSSRESEVNESVGDPEKVS-GEGSFPDLSLGGHDVNNEHVEKSATDEDEI- 473
PT I +S+V V K S E + ++ + ++E E+E
Sbjct: 388 PTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI---YLELKVKLENEYA 444
Query: 474 MEDQGVE----TGTAEEKTVKSERLNGYSDVSEKTHPGAH---------WDVFRR--QDV 518
+ V+ T + + L+ Y +H G H +FR D
Sbjct: 445 LHRSIVDHYNIPKTFDSDDLIPPYLDQYF----YSHIGHHLKNIEHPERMTLFRMVFLDF 500
Query: 519 PKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLG 578
L + +R T + + N Y + N +L F +
Sbjct: 501 RFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAIL----DFLPKIE 556
Query: 579 EAVFIPAGCPFQVRNLQSTVQLGLDFLFPES--VGEAVRLAE 618
E + + +L +++ L + + EA + +
Sbjct: 557 ENLIC---SKY--TDL---LRIAL--MAEDEAIFEEAHKQVQ 588
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 691 | ||||
| d1v5na_ | 89 | g.49.1.3 (A:) Pdi-like hypothetical protein At1g60 | 0.001 |
| >d1v5na_ g.49.1.3 (A:) Pdi-like hypothetical protein At1g60420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 89 | Back information, alignment and structure |
|---|
class: Small proteins fold: Cysteine-rich domain superfamily: Cysteine-rich domain family: C1-like domain domain: Pdi-like hypothetical protein At1g60420 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 36.4 bits (84), Expect = 0.001
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 57 KLSADEQMCCNICRIPIIDYHRHCGNCMYDLCLSC 91
+L+ + C+ C + HC C +DL C
Sbjct: 41 ELTRVQVYTCDKCEEEGTIWSYHCDECDFDLHAKC 75
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 691 | |||
| d1h2ka_ | 335 | Hypoxia-inducible factor HIF ihhibitor (FIH1) {Hum | 99.12 | |
| d1vrba1 | 319 | Putative asparaginyl hydroxylase YxbC {Bacillus su | 98.83 | |
| d1v70a_ | 105 | Hypothetical protein TTHA0104 {Thermus thermophilu | 93.1 | |
| d1vj2a_ | 114 | Hypothetical protein TM1459 {Thermotoga maritima [ | 91.6 | |
| d1rc6a_ | 253 | Hypothetical protein YlbA {Escherichia coli [TaxId | 90.44 | |
| d2b8ma1 | 108 | Hypothetical protein MJ0764 {Archaeon Methanococcu | 90.08 | |
| d1yhfa1 | 112 | Hypothetical protein SPy1581 {Streptococcus pyogen | 89.93 | |
| d1sefa_ | 250 | Hypothetical protein EF2996 {Enterococcus faecalis | 89.9 | |
| d1lr5a_ | 160 | Auxin binding protein {Maize (Zea mays) [TaxId: 45 | 89.47 | |
| d1juha_ | 348 | Quercetin 2,3-dioxygenase {Aspergillus japonicus [ | 86.3 | |
| d1sfna_ | 245 | Hypothetical protein DR1152 {Deinococcus radiodura | 86.23 | |
| d1sq4a_ | 273 | Glyoxylate-induced protein PA1140 {Pseudomonas aer | 85.65 | |
| d2dipa1 | 85 | Zinc finger ZZ-type-containing protein 2 {Human (H | 84.39 | |
| d2bnma2 | 122 | Hydroxypropylphosphonic acid epoxidase Fom4, C-ter | 84.33 | |
| d1x82a_ | 190 | Glucose-6-phosphate isomerase, GPI {Archaeon Pyroc | 84.22 | |
| d1j58a_ | 372 | Oxalate decarboxylase OxdC (YvrK) {Bacillus subtil | 82.95 | |
| d1o4ta_ | 115 | Hypothetical protein TM1287 {Thermotoga maritima [ | 82.67 | |
| d1y3ta1 | 330 | Hypothetical protein YxaG {Bacillus subtilis [TaxI | 82.34 | |
| d1zx5a1 | 299 | Putative mannosephosphate isomerase AF0035 {Archae | 80.8 | |
| d2fc7a1 | 69 | Zinc finger ZZ-type-containing protein 3, ZZZ3 {Hu | 80.66 | |
| d1qwra_ | 315 | Mannose-6-phosphate isomerase ManA {Bacillus subti | 80.47 |
| >d1h2ka_ b.82.2.6 (A:) Hypoxia-inducible factor HIF ihhibitor (FIH1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Clavaminate synthase-like family: Hypoxia-inducible factor HIF ihhibitor (FIH1) domain: Hypoxia-inducible factor HIF ihhibitor (FIH1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.12 E-value=3.3e-11 Score=94.57 Aligned_cols=41 Identities=15% Similarity=0.236 Sum_probs=36.3
Q ss_pred HHCCEEEEEEEECCCEEEECCCCCCCCCCCCC-CCEEECCCC
Q ss_conf 73960068874138647846899201145555-411102345
Q 005541 565 EFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQS-TVQLGLDFL 605 (691)
Q Consensus 565 EyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkS-CIKVAlDFV 605 (691)
-.++.+|.+++.+||++|||+|..|||+|+.+ ++.|++.|-
T Consensus 241 ~~~~~~~~~~l~pGd~L~iP~~w~H~V~~~~~~~~sisvn~w 282 (335)
T d1h2ka_ 241 FQNVVGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFW 282 (335)
T ss_dssp GGGCCEEEEEECTTCEEEECTTCEEEEEECTTSCCEEEEEEE
T ss_pred HHCCCCEEEEECCCCEEEECCCCEEEEEECCCCCEEEEEEEE
T ss_conf 105971499988998786279970899975899769999752
|
| >d1vrba1 b.82.2.11 (A:8-326) Putative asparaginyl hydroxylase YxbC {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1v70a_ b.82.1.9 (A:) Hypothetical protein TTHA0104 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1vj2a_ b.82.1.10 (A:) Hypothetical protein TM1459 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1rc6a_ b.82.1.11 (A:) Hypothetical protein YlbA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2b8ma1 b.82.1.18 (A:1-108) Hypothetical protein MJ0764 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
| >d1yhfa1 b.82.1.9 (A:1-112) Hypothetical protein SPy1581 {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
| >d1sefa_ b.82.1.11 (A:) Hypothetical protein EF2996 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
| >d1lr5a_ b.82.1.2 (A:) Auxin binding protein {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
| >d1juha_ b.82.1.5 (A:) Quercetin 2,3-dioxygenase {Aspergillus japonicus [TaxId: 34381]} | Back information, alignment and structure |
|---|
| >d1sfna_ b.82.1.11 (A:) Hypothetical protein DR1152 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
| >d1sq4a_ b.82.1.11 (A:) Glyoxylate-induced protein PA1140 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d2dipa1 g.44.1.6 (A:8-92) Zinc finger ZZ-type-containing protein 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2bnma2 b.82.1.10 (A:77-198) Hydroxypropylphosphonic acid epoxidase Fom4, C-terminal domain {Streptomyces wedmorensis [TaxId: 43759]} | Back information, alignment and structure |
|---|
| >d1x82a_ b.82.1.7 (A:) Glucose-6-phosphate isomerase, GPI {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1j58a_ b.82.1.2 (A:) Oxalate decarboxylase OxdC (YvrK) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1o4ta_ b.82.1.9 (A:) Hypothetical protein TM1287 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1y3ta1 b.82.1.5 (A:5-334) Hypothetical protein YxaG {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1zx5a1 b.82.1.3 (A:1-299) Putative mannosephosphate isomerase AF0035 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
| >d2fc7a1 g.44.1.6 (A:8-76) Zinc finger ZZ-type-containing protein 3, ZZZ3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1qwra_ b.82.1.3 (A:) Mannose-6-phosphate isomerase ManA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|