Citrus Sinensis ID: 005551

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-
MEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRKVKDAWDKKRDMLAQSGAFAIEQLSEALSASASSNKLPDELPQNALRLCAEQLSKSYDSRFGGFGSAPKFPRPVEIQMMLYHSKKLEDTGKSGEASEGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMIGPGGEIFSAEDADSAETEGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPSKAPGFLDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAGSKSDYYRQNAEHSLAVFETRLKDMAMAVPLMCCAADMLSVPSRKHVVLVGHKSSVDFENMLAAAHASYDLNKTVIHIDPADTEEMDFWEEHNSNNASMARNNFSADKVVALVCQNFSCSPPVTDPISLENLLLEKPSSTA
ccccccccHHHHHHHHccccEEEEcccccccHHHHHHHHHHHHccccccccEEEEccccccEEEEcccccccccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccccccccccccEEEccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccEEEEcHHHHHHHHcHHHHHHHHHHccccccccccccccccccccccccEEEEccccHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHccccccccEEEEEccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccEEEccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEcccccHHHHHHHHHHHHcccccEEEEEEccccccHHHHHHHccccccccccccccccccEEEEccccccccccccHHHHHHHHHccccccc
ccccccccHHHHHHHHHccEEEEEcccccccHHHHHHHHHHHHcccccccEEEEEccccccEEEEcccccccccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHccHHccccccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccccccccccccEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccEEEccccccccccccccccccEEEEEcHHHHHHHHccHHHHHHHHccccccccEccccccccccccccccEcEccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHccccccccHHHHHHHHHHHHHHHHHHccccccccEEEEccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccEEEcccccccEEEEccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHccccHHHHccccccccEEEEEEEccccccccccHHHHHHHHHccccccc
MEVESFEDEGVAKLLNDWFVSIkvdreerpdvdkVYMTYVQALyggggwplsvflspdlkplmggtyfppedkygrpgfKTILRKVKDAWDKKRDMLAQSGAFAIEQLSEALSasassnklpdelpQNALRLCAEQLSKSydsrfggfgsapkfprpvEIQMMLYHSKkledtgksgeasegQKMVLFTLQCMakggihdhvgggfhrysvderwhvphfekmlYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRrdmigpggeifsaedadsaetegatrkkegaFYVWTSKEVEDILGEHAILFKEhyylkptgncdlsrmsdphnefkgknVLIELndssasasklgmPLEKYLNILGECRRKLfdvrskrprphlddkvivSWNGLVISSFARASKILKSEAesamfnfpvvgsdrkEYMEVAESAASFIRRHLYDEQTHRLqhsfrngpskapgfldDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDelfldregggyfnttgedpsvllrvkedhdgaepsgnsvSVINLVRLASIvagsksdyyrqNAEHSLAVFETRLKDMAMAVPLMCCAAdmlsvpsrkHVVLVGHKSSVDFENMLAAAHAsydlnktvihidpadteemdfweehnsnnasmarnnfSADKVVALVCQnfscsppvtdpislenlllekpssta
mevesfedegvakllndwfvsikvdreerpdvdkVYMTYVQALYGGGGWPLSVFLSPDLKPLMGGtyfppedkygrpgFKTILRKVKDAWDKKRDMLAQSGAFAIEQLSEALSASASSNKLPDELPQNALRLCAEQLSKSYDSRFGGFGSAPKFPRPVEIQMMLYHSKKLEDTGKSGEASEGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMIGPGGeifsaedadsaetegatrkkegafyvWTSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLEKYLNILGECRRKLfdvrskrprphlddkvivswNGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPSKAPGFLDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDgaepsgnsvsvinLVRLASIVAGSKSDYYRQNAEHSLAVFETRLKDMAMAVPLMCCAADMLSVPSRKHVVLVGHKSSVDFENMLAAAHASYDLNKTVIHIDPADTEEMDFWEEHNSNNASMARNNFSADKVVALVCQNFScsppvtdpislenlllekpssta
MEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRKVKDAWDKKRDMLAQSGAFAIEQlsealsasassNKLPDELPQNALRLCAEQLSKSYDSRFGGFGSAPKFPRPVEIQMMLYHSKKLEDTGKSGEASEGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMIGPGGEIFSAEDADSAETEGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPSKAPGFLDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAGSKSDYYRQNAEHSLAVFETRLKDMAMAVPLMCCAADMLSVPSRKHVVLVGHKSSVDFENMLAAAHASYDLNKTVIHIDPADTEEMDFWEEHNSNNASMARNNFSADKVVALVCQNFSCSPPVTDPISLENLLLEKPSSTA
**********VAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRKVKDAWDKKRDMLA***AF********************************************************IQMML********************MVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMIGPGGEIF******************GAFYVWTSKEVEDILGEHAILFKEHYYLKPTGNCDL**************VLI************GMPLEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRL**********APGFLDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDREGGGYFNTTG****VLL***************VSVINLVRLASIVAGSKSDYYRQNAEHSLAVFETRLKDMAMAVPLMCCAADMLSVPSRKHVVLVGHKSSVDFENMLAAAHASYDLNKTVIHIDPADTEEMDFW*************NFSADKVVALVCQNFSCSPPVTDPI**************
**VESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRKVKDAWDKKRDML****AF************************NALRLCAEQLSKSYDSRFGGFGSAPKFPRPVEIQMMLYHSKKLEDTGKSGEASEGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMIGPGGEIFSAEDADSAETEGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPSKAPGFLDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAGSKSDYYRQNAEHSLAVFETRLKDMAMAVPLMCCAADMLSVPSRKHVVLVGHKSSVDFENMLAAAHASYDLNKTVIHIDPADTEEMDFWEEHNSNNASMARNNFSADKVVALVCQNFSCSPPVTDPISLEN***E******
********EGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRKVKDAWDKKRDMLAQSGAFAIEQLSEA**********PDELPQNALRLCAEQLSKSYDSRFGGFGSAPKFPRPVEIQMMLYHSKKL**********EGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMIGPGGEIFSA************RKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPSKAPGFLDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAGSKSDYYRQNAEHSLAVFETRLKDMAMAVPLMCCAADMLSVPSRKHVVLVGHKSSVDFENMLAAAHASYDLNKTVIHIDPADTEEMDFWEEHNSNNASMARNNFSADKVVALVCQNFSCSPPVTDPISLENLLLEKPSSTA
*****FEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRKVKDAWDKKRDMLAQSGAFAIEQLSEALSASAS****PDELPQNALRLCAEQLSKSYDSRFGGFGSAPKFPRPVEIQMMLYHSKKLEDTGKSGEASEGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMIGPGGEIFSAEDADSAETEGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPSKAPGFLDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAGSKSDYYRQNAEHSLAVFETRLKDMAMAVPLMCCAADMLSVPSRKHVVLVGHKSSVDFENMLAAAHASYDLNKTVIHIDPADTEEMDFWEEHNSNNASMARNNFSADKVVALVCQNFSCSPPVTDPISLENLLLE******
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MEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRKVKDAWDKKRDMLAQSGAFAIEQLSEALSASASSNKLPDELPQNALRLCAEQLSKSYDSRFGGFGSAPKFPRPVEIQMMLYHSKKLEDTGKSGEASEGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMIGPGGEIFSAEDADSAETEGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPSKAPGFLDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAGSKSDYYRQNAEHSLAVFETRLKDMAMAVPLMCCAADMLSVPSRKHVVLVGHKSSVDFENMLAAAHASYDLNKTVIHIDPADTEEMDFWEEHNSNNASMARNNFSADKVVALVCQNFSCSPPVTDPISLENLLLEKPSSTA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query691 2.2.26 [Sep-21-2011]
Q8TB22786 Spermatogenesis-associate yes no 0.933 0.820 0.411 1e-144
Q80YT5790 Spermatogenesis-associate yes no 0.930 0.813 0.400 1e-137
Q6T393789 Spermatogenesis-associate yes no 0.933 0.817 0.391 1e-135
Q09214729 Uncharacterized protein B yes no 0.926 0.877 0.365 1e-113
P37512689 Uncharacterized protein Y yes no 0.887 0.889 0.345 1e-103
>sp|Q8TB22|SPT20_HUMAN Spermatogenesis-associated protein 20 OS=Homo sapiens GN=SPATA20 PE=2 SV=3 Back     alignment and function desciption
 Score =  512 bits (1318), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 291/707 (41%), Positives = 409/707 (57%), Gaps = 62/707 (8%)

Query: 1   MEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLK 60
           ME ESF++E + +LL++ FVS+KVDREERPDVDKVYMT+VQA   GGGWP++V+L+P+L+
Sbjct: 116 MEEESFQNEEIGRLLSEDFVSVKVDREERPDVDKVYMTFVQATSSGGGWPMNVWLTPNLQ 175

Query: 61  PLMGGTYFPPEDKYGRPGFKTILRKVKDAWDKKRDMLAQSGAFAIEQLSEALSASASSNK 120
           P +GGTYFPPED   R GF+T+L ++++ W + ++ L ++     ++++ AL A +  + 
Sbjct: 176 PFVGGTYFPPEDGLTRVGFRTVLLRIREQWKQNKNTLLENS----QRVTTALLARSEISV 231

Query: 121 LPDELPQNALRL---CAEQLSKSYDSRFGGFGSAPKFPRPVEIQMML--YHSKKLEDTGK 175
              +LP +A  +   C +QL + YD  +GGF  APKFP PV +  +   + S +L   G 
Sbjct: 232 GDRQLPPSAATVNNRCFQQLDEGYDEEYGGFAEAPKFPTPVILSFLFSYWLSHRLTQDG- 290

Query: 176 SGEASEGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYL 235
               S  Q+M L TL+ MA GGI DHVG GFHRYS D +WHVPHFEKMLYDQ QLA  Y 
Sbjct: 291 ----SRAQQMALHTLKMMANGGIRDHVGQGFHRYSTDRQWHVPHFEKMLYDQAQLAVAYS 346

Query: 236 DAFSLTKDVFYSYICRDILDYLRRDMIGPGGEIFSAEDADSAETEGATRKKEGAFYVWTS 295
            AF L+ D FYS + + IL Y+ R +    G  +SAEDADS    G  R KEGA+YVWT 
Sbjct: 347 QAFQLSGDEFYSDVAKGILQYVARSLSHRSGGFYSAEDADSPPERG-QRPKEGAYYVWTV 405

Query: 296 KEVEDILGEHAI----------LFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDS 345
           KEV+ +L E  +          L  +HY L   GN  +S   DP  E +G+NVL      
Sbjct: 406 KEVQQLLPEPVLGATEPLTSGQLLMKHYGLTEAGN--ISPSQDPKGELQGQNVLTVRYSL 463

Query: 346 SASASKLGMPLEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLVISSFARASKIL 405
             +A++ G+ +E    +L     KLF  R  RP+PHLD K++ +WNGL++S +A    +L
Sbjct: 464 ELTAARFGLDVEAVRTLLNSGLEKLFQARKHRPKPHLDSKMLAAWNGLMVSGYAVTGAVL 523

Query: 406 KSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGP------SK 459
                         G DR   +  A + A F++RH++D  + RL  +   GP      S 
Sbjct: 524 --------------GQDR--LINYATNGAKFLKRHMFDVASGRLMRTCYTGPGGTVEHSN 567

Query: 460 AP--GFLDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDREGGGYFNTTGEDP 517
            P  GFL+DYAF++ GLLDLYE    + WL WA+ LQ+TQD+LF D +GGGYF +  E  
Sbjct: 568 PPCWGFLEDYAFVVRGLLDLYEASQESAWLEWALRLQDTQDKLFWDSQGGGYFCSEAELG 627

Query: 518 SVL-LRVKEDHDGAEPSGNSVSVINLVRLASIVAGSKSDYYRQNAEHSLAVFETRLKDMA 576
           + L LR+K+D DGAEPS NSVS  NL+RL     G K   +       L  F  R++ + 
Sbjct: 628 AGLPLRLKDDQDGAEPSANSVSAHNLLRLHGFT-GHKD--WMDKCVCLLTAFSERMRRVP 684

Query: 577 MAVPLMCCAADMLSVPSRKHVVLVGHKSSVDFENMLAAAHASYDLNKTVIHIDPADTEEM 636
           +A+P M  A       + K +V+ G + + D + ++   H+ Y  NK +I    AD +  
Sbjct: 685 VALPEMVRALSA-QQQTLKQIVICGDRQAKDTKALVQCVHSVYIPNKVLIL---ADGDPS 740

Query: 637 DFWEEHNSNNASMARNNFSADKVVALVCQNFSCSPPVTDPISLENLL 683
            F        +++ R     D+  A VC+N +CS P+TDP  L  LL
Sbjct: 741 SFLSRQLPFLSTLRRLE---DQATAYVCENQACSVPITDPCELRKLL 784
May play a role in fertility regulation.
Homo sapiens (taxid: 9606)
>sp|Q80YT5|SPT20_MOUSE Spermatogenesis-associated protein 20 OS=Mus musculus GN=Spata20 PE=2 SV=1 Back     alignment and function description
>sp|Q6T393|SPT20_RAT Spermatogenesis-associated protein 20 OS=Rattus norvegicus GN=Spata20 PE=1 SV=1 Back     alignment and function description
>sp|Q09214|YP65_CAEEL Uncharacterized protein B0495.5 OS=Caenorhabditis elegans GN=B0495.5 PE=4 SV=2 Back     alignment and function description
>sp|P37512|YYAL_BACSU Uncharacterized protein YyaL OS=Bacillus subtilis (strain 168) GN=yyaL PE=4 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query691
359479833 819 PREDICTED: spermatogenesis-associated pr 0.998 0.842 0.833 0.0
296086616754 unnamed protein product [Vitis vinifera] 0.998 0.915 0.833 0.0
255559290 874 conserved hypothetical protein [Ricinus 0.998 0.789 0.827 0.0
449436537 855 PREDICTED: spermatogenesis-associated pr 0.995 0.804 0.797 0.0
449498445 855 PREDICTED: LOW QUALITY PROTEIN: spermato 0.995 0.804 0.792 0.0
356570951755 PREDICTED: spermatogenesis-associated pr 0.984 0.900 0.801 0.0
115432144 839 cold-induced thioredoxin domain-containi 0.988 0.814 0.814 0.0
356505532 809 PREDICTED: spermatogenesis-associated pr 0.998 0.852 0.801 0.0
224132400756 predicted protein [Populus trichocarpa] 0.976 0.892 0.829 0.0
357511183 809 Spermatogenesis-associated protein [Medi 0.997 0.851 0.791 0.0
>gi|359479833|ref|XP_002267103.2| PREDICTED: spermatogenesis-associated protein 20-like [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1207 bits (3122), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 575/690 (83%), Positives = 625/690 (90%)

Query: 1   MEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLK 60
           MEVESFE+EGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLK
Sbjct: 130 MEVESFENEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLK 189

Query: 61  PLMGGTYFPPEDKYGRPGFKTILRKVKDAWDKKRDMLAQSGAFAIEQLSEALSASASSNK 120
           PLMGGTYFPP+DKYGRPGFKT+LRKVKDAW+ KRD+L +SGAFAIEQLSEALSA+ASSNK
Sbjct: 190 PLMGGTYFPPDDKYGRPGFKTVLRKVKDAWENKRDVLVKSGAFAIEQLSEALSATASSNK 249

Query: 121 LPDELPQNALRLCAEQLSKSYDSRFGGFGSAPKFPRPVEIQMMLYHSKKLEDTGKSGEAS 180
           L D +PQ AL LCAEQL+ +YD  +GGFGSAPKFPRPVEIQ+MLYH KKLE++GKSGEA+
Sbjct: 250 LADGIPQQALHLCAEQLAGNYDPEYGGFGSAPKFPRPVEIQLMLYHYKKLEESGKSGEAN 309

Query: 181 EGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSL 240
           E  KMV F+LQCMA+GG+HDH+GGGFHRYSVDE WHVPHFEKMLYDQGQLAN YLD FS+
Sbjct: 310 EVLKMVAFSLQCMARGGVHDHIGGGFHRYSVDECWHVPHFEKMLYDQGQLANAYLDVFSI 369

Query: 241 TKDVFYSYICRDILDYLRRDMIGPGGEIFSAEDADSAETEGATRKKEGAFYVWTSKEVED 300
           TKDVFYS + RDILDYLRRDMIGP GEIFSAEDADSAE+E A RKKEGAFY+WTSKEVED
Sbjct: 370 TKDVFYSCVSRDILDYLRRDMIGPEGEIFSAEDADSAESEDAARKKEGAFYIWTSKEVED 429

Query: 301 ILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLEKYL 360
           ++GEHA LFK+HYY+KP+GNCDLSRMSDPHNEFKGKNVLIE N +SA ASKLGMP+EKYL
Sbjct: 430 VIGEHASLFKDHYYIKPSGNCDLSRMSDPHNEFKGKNVLIERNCASAMASKLGMPVEKYL 489

Query: 361 NILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLVISSFARASKILKSEAESAMFNFPVVG 420
           +ILG CRRKLFDVR  RPRPHLDDKVIVSWNGL ISSFARASKILKSEAE   F FPVVG
Sbjct: 490 DILGTCRRKLFDVRLNRPRPHLDDKVIVSWNGLAISSFARASKILKSEAEGTKFRFPVVG 549

Query: 421 SDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPSKAPGFLDDYAFLISGLLDLYEF 480
            D KEYMEVAE AASFIR+ LYDEQT RL+HSFRNGPSKAPGFLDDYAFLISGLLD+YEF
Sbjct: 550 CDPKEYMEVAEKAASFIRKWLYDEQTRRLRHSFRNGPSKAPGFLDDYAFLISGLLDIYEF 609

Query: 481 GSGTKWLVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVI 540
           G  T WLVWAIELQ+TQDELFLD+EGGGYFNT GEDPSVLLRVKEDHDGAEPSGNSVSVI
Sbjct: 610 GGNTNWLVWAIELQDTQDELFLDKEGGGYFNTPGEDPSVLLRVKEDHDGAEPSGNSVSVI 669

Query: 541 NLVRLASIVAGSKSDYYRQNAEHSLAVFETRLKDMAMAVPLMCCAADMLSVPSRKHVVLV 600
           NLVRL S+VAGS  + +R+NAEH LAVFETRLKDMAMAVPLMCC ADM SVPSRK VVLV
Sbjct: 670 NLVRLTSMVAGSWFERHRRNAEHLLAVFETRLKDMAMAVPLMCCGADMFSVPSRKQVVLV 729

Query: 601 GHKSSVDFENMLAAAHASYDLNKTVIHIDPADTEEMDFWEEHNSNNASMARNNFSADKVV 660
           GHKSSV+FE+MLAAAHA YD N+TVIHIDP +TE+M+FWE  NSN A MA+NNF+ DKVV
Sbjct: 730 GHKSSVEFEDMLAAAHAQYDPNRTVIHIDPTETEQMEFWEAMNSNIALMAKNNFAPDKVV 789

Query: 661 ALVCQNFSCSPPVTDPISLENLLLEKPSST 690
           ALVCQNF+CS PVTD  SL+ LL  KPSS 
Sbjct: 790 ALVCQNFTCSSPVTDSTSLKALLCLKPSSA 819

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|296086616|emb|CBI32251.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255559290|ref|XP_002520665.1| conserved hypothetical protein [Ricinus communis] gi|223540050|gb|EEF41627.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|449436537|ref|XP_004136049.1| PREDICTED: spermatogenesis-associated protein 20-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449498445|ref|XP_004160539.1| PREDICTED: LOW QUALITY PROTEIN: spermatogenesis-associated protein 20-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356570951|ref|XP_003553646.1| PREDICTED: spermatogenesis-associated protein 20-like [Glycine max] Back     alignment and taxonomy information
>gi|115432144|gb|ABI97349.1| cold-induced thioredoxin domain-containing protein [Ammopiptanthus mongolicus] Back     alignment and taxonomy information
>gi|356505532|ref|XP_003521544.1| PREDICTED: spermatogenesis-associated protein 20-like [Glycine max] Back     alignment and taxonomy information
>gi|224132400|ref|XP_002321330.1| predicted protein [Populus trichocarpa] gi|222862103|gb|EEE99645.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357511183|ref|XP_003625880.1| Spermatogenesis-associated protein [Medicago truncatula] gi|355500895|gb|AES82098.1| Spermatogenesis-associated protein [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query691
TAIR|locus:2125541818 AT4G03200 [Arabidopsis thalian 0.988 0.834 0.739 2.5e-280
ZFIN|ZDB-GENE-030131-7269818 spata20 "spermatogenesis assoc 0.945 0.798 0.419 4.1e-136
UNIPROTKB|F1NIQ1685 SPATA20 "Uncharacterized prote 0.863 0.871 0.441 1.9e-131
UNIPROTKB|Q8TB22786 SPATA20 "Spermatogenesis-assoc 0.937 0.824 0.409 6.4e-131
UNIPROTKB|A4FV36789 SPATA20 "Uncharacterized prote 0.947 0.830 0.411 9.3e-130
UNIPROTKB|F1RT97789 LOC100738512 "Uncharacterized 0.947 0.830 0.408 5.2e-129
UNIPROTKB|I3LGI2773 LOC100738512 "Uncharacterized 0.947 0.847 0.408 5.2e-129
UNIPROTKB|E2QU41789 SPATA20 "Uncharacterized prote 0.937 0.821 0.399 2.2e-128
UNIPROTKB|F1PTK3789 MYCBPAP "Uncharacterized prote 0.937 0.821 0.399 2.2e-128
UNIPROTKB|F6UYN9821 MYCBPAP "Uncharacterized prote 0.937 0.789 0.399 2.2e-128
TAIR|locus:2125541 AT4G03200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2694 (953.4 bits), Expect = 2.5e-280, P = 2.5e-280
 Identities = 505/683 (73%), Positives = 579/683 (84%)

Query:     1 MEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLK 60
             MEVESFEDE VAKLLN+ FVSIKVDREERPDVDKVYM++VQALYGGGGWPLSVFLSPDLK
Sbjct:   134 MEVESFEDEEVAKLLNNSFVSIKVDREERPDVDKVYMSFVQALYGGGGWPLSVFLSPDLK 193

Query:    61 PLMGGTYFPPEDKYGRPGFKTILRKVKDAWDKKRDMLAQSGAFAIEQXXXXXXXXXXXNK 120
             PLMGGTYFPP D YGRPGFKT+L+KVKDAW+ KRD L +SG +AIE+           +K
Sbjct:   194 PLMGGTYFPPNDNYGRPGFKTLLKKVKDAWNSKRDTLVKSGTYAIEELSKALSASTGADK 253

Query:   121 LPDELPQNALRLCAEQLSKSYDSRFGGFGSAPKFPRPVEIQMMLYHSKKLEDTGKSGEAS 180
             L D + + A+  CA+QLS+SYDS FGGFGSAPKFPRPVEIQ+MLYH KKL+++GK+ EA 
Sbjct:   254 LSDGISREAVSTCAKQLSRSYDSEFGGFGSAPKFPRPVEIQLMLYHYKKLKESGKTSEAD 313

Query:   181 EGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSL 240
             E + MVLF+LQ MA GG+HDH+GGGFHRYSVDE WHVPHFEKMLYDQGQLANVYLD FS+
Sbjct:   314 EEKSMVLFSLQGMANGGMHDHIGGGFHRYSVDECWHVPHFEKMLYDQGQLANVYLDGFSI 373

Query:   241 TKDVFYSYICRDILDYLRRDMIGPGGEIFSAEDADSAETEGATRKKEGAFYVWTSKEVED 300
             TKDV YSY+ RDILDYLRRDMI P G IFSAEDADS E EGA RKKEGAFY+WTS E+++
Sbjct:   374 TKDVMYSYVARDILDYLRRDMIAPEGGIFSAEDADSFEFEGAKRKKEGAFYIWTSDEIDE 433

Query:   301 ILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLEKYL 360
             +LGE+A LFKEHYY+K +GNCDLS  SDPHNEF GKNVLIE N++SA ASK  + +EKY 
Sbjct:   434 VLGENADLFKEHYYVKKSGNCDLSSRSDPHNEFAGKNVLIERNETSAMASKFSLSVEKYQ 493

Query:   361 NILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLVISSFARASKILKSEAESAMFNFPVVG 420
              ILGECRRKLFDVR KRP+PHLDDK+IVSWNGLVISSFARASKILK+E ES  + FPVV 
Sbjct:   494 EILGECRRKLFDVRLKRPKPHLDDKIIVSWNGLVISSFARASKILKAEPESTKYYFPVVN 553

Query:   421 SDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPSKAPGFLDDYAFLISGLLDLYEF 480
             S  ++Y+EVAE AA FIR +LYDEQ+ RLQHS+R GPSKAP FLDDYAFLISGLLDLYE 
Sbjct:   554 SQPEDYIEVAEKAALFIRGNLYDEQSRRLQHSYRQGPSKAPAFLDDYAFLISGLLDLYEN 613

Query:   481 GSGTKWLVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVI 540
             G G +WL WAI+LQ TQDEL+LDREGG YFNT G+DPSVLLRVKEDHDGAEPSGNSVS I
Sbjct:   614 GGGIEWLKWAIKLQETQDELYLDREGGAYFNTEGQDPSVLLRVKEDHDGAEPSGNSVSAI 673

Query:   541 NLVRLASIVAGSKSDYYRQNAEHSLAVFETRLKDMAMAVPLMCCAADMLSVPSRKHVVLV 600
             NLVRLASIVAG K++ Y   A   LAVFE RL+++A+AVPLMCC+ADM+SVPSRK VVLV
Sbjct:   674 NLVRLASIVAGEKAESYLNTAHRLLAVFELRLRELAVAVPLMCCSADMISVPSRKQVVLV 733

Query:   601 GHKSSVDFENMLAAAHASYDLNKTVIHIDPADTEEMDFWEEHNSNNASMARNNFSADKVV 660
             G KSS +  NML+AAH+ YD NKTVIHIDP+ ++E++FWEEHNSN A MA+ N +++KVV
Sbjct:   734 GSKSSPELTNMLSAAHSVYDPNKTVIHIDPSSSDEIEFWEEHNSNVAEMAKKNRNSEKVV 793

Query:   661 ALVCQNFSCSPPVTDPISLENLL 683
             ALVCQ+F+CSPPV D  SL  LL
Sbjct:   794 ALVCQHFTCSPPVFDSSSLTRLL 816
GO:0003824 "catalytic activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0009507 "chloroplast" evidence=IDA
ZFIN|ZDB-GENE-030131-7269 spata20 "spermatogenesis associated 20" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1NIQ1 SPATA20 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q8TB22 SPATA20 "Spermatogenesis-associated protein 20" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|A4FV36 SPATA20 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1RT97 LOC100738512 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|I3LGI2 LOC100738512 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E2QU41 SPATA20 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1PTK3 MYCBPAP "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F6UYN9 MYCBPAP "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q6T393SPT20_RATNo assigned EC number0.39170.93340.8174yesno
P37512YYAL_BACSUNo assigned EC number0.34510.88710.8896yesno
Q8TB22SPT20_HUMANNo assigned EC number0.41150.93340.8206yesno
Q80YT5SPT20_MOUSENo assigned EC number0.40050.93050.8139yesno
Q09214YP65_CAEELNo assigned EC number0.36530.92610.8779yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query691
COG1331667 COG1331, COG1331, Highly conserved protein contain 0.0
pfam03190163 pfam03190, DUF255, Protein of unknown function, DU 4e-58
cd02955124 cd02955, SSP411, TRX domain, SSP411 protein family 4e-54
>gnl|CDD|224250 COG1331, COG1331, Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
 Score =  574 bits (1482), Expect = 0.0
 Identities = 260/686 (37%), Positives = 353/686 (51%), Gaps = 80/686 (11%)

Query: 1   MEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLK 60
           M  ESFED  +A +LN+ FV +KVDREERPDVD +YM   QA+ G GGWPL+VFL+PD K
Sbjct: 61  MAHESFEDPEIAAILNENFVPVKVDREERPDVDSLYMNASQAITGQGGWPLTVFLTPDGK 120

Query: 61  PLMGGTYFPPEDKYGRPGFKTILRKVKDAWDKKRDMLAQSGAFAIEQLSEALSASASSNK 120
           P   GTYFP ED+YGRPGFK +L  +++ W + R+ L QS     E++ EAL   A  + 
Sbjct: 121 PFFAGTYFPKEDRYGRPGFKQLLEAIRETWREDREELLQSA----ERVLEALEGLARPSA 176

Query: 121 LPDELPQNALRLCAEQLSKSYDSRFGGFGSAPKFPRPVEIQMMLYHSKKLEDTGKSGEAS 180
             +EL +  L   AE L++S+D  +GGFGSAPKFP P  +  +L +S +  D        
Sbjct: 177 -GEELDEEVLDRAAEALARSFDREYGGFGSAPKFPPPHLLLFLLRYSLRTGD-------E 228

Query: 181 EGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSL 240
               MVL TL  MA+GGI+DH+GGGF RYS D  W VPHFEKMLYD   L   Y +A+  
Sbjct: 229 RALDMVLRTLDAMARGGIYDHLGGGFFRYSTDREWLVPHFEKMLYDNALLLRAYAEAYRA 288

Query: 241 TKDVFYSYICRDILDYLRRDMIGPGGEIFSAEDADSAETEGATRKKEGAFYVWTSKEVED 300
           T D  Y      ILDYL R++  P G  +S+ DADS + E      EG +Y W+ +E+++
Sbjct: 289 TGDDLYRRAAEGILDYLLRELYSPEGGFYSSLDADS-DGE------EGKYYTWSVEELKE 341

Query: 301 ILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLEKYL 360
           +LGE A L  +++ +   GN            F+G+NVL        +  +    LE   
Sbjct: 342 VLGEDAELACKYFDVSEEGN------------FEGRNVLHVPGPLEEAIEEAEEKLE--- 386

Query: 361 NILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLVISSFARASKILKSEAESAMFNFPVVG 420
                 R KL   R KR +P  DDKV+  WNGL+I++ A A ++L               
Sbjct: 387 ----RAREKLLAAREKRKQPSRDDKVLTDWNGLMIAALAEAGRVL--------------- 427

Query: 421 SDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPSKAPGFLDDYAFLISGLLDLYEF 480
               EY+E AE AA FI  +LY     RL   +R G +   G L+DYAFLI GLL LYE 
Sbjct: 428 -GDPEYLEAAERAADFILDNLYV---DRLLRRYRGGEAAVAGLLEDYAFLILGLLALYEA 483

Query: 481 GSGTKWLVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVI 540
                +L  AIEL +     F D + GG+++T  +   +L+R KE  DGA PSGN+V+  
Sbjct: 484 TGDLAYLEKAIELADEAIADFWD-DEGGFYDTPSDSEDLLIRPKEPTDGATPSGNAVAAQ 542

Query: 541 NLVRLASIVAGSKSDYYRQNAEHSLAVFETRLKDMAMAVPLMCCAADMLSVPSRKHVVLV 600
            L+RL+ +   ++   Y + AE  L  F    +    A   +  AA+ L +     +V+ 
Sbjct: 543 ALLRLSLLTGDAR---YLEAAEDILQAFAGLAERAPFAHAGLLLAAEFL-ISGPLVIVVA 598

Query: 601 GHKSSVDFENMLAAAHASYDLNKTVIHIDPADTEEMDFWEEHNSNNASMARNNFSADKVV 660
           G   S     +L AA   Y   K ++             E + S                
Sbjct: 599 GDPRS----ELLRAALRLYLPEKVLVVGT----------EGYVSLLVDGMLGGGKT---- 640

Query: 661 ALVCQNFSCSPPVTDPISLENLLLEK 686
           A VC   +C PPVT P  L  LL   
Sbjct: 641 AYVCTGDACLPPVTSPEELAELLAVL 666

Length = 667
>gnl|CDD|202571 pfam03190, DUF255, Protein of unknown function, DUF255 Back     alignment and domain information
>gnl|CDD|239253 cd02955, SSP411, TRX domain, SSP411 protein family; members of this family are highly conserved proteins present in eukaryotes, bacteria and archaea, about 600-800 amino acids in length, which contain a TRX domain with a redox active CXXC motif Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 691
COG1331667 Highly conserved protein containing a thioredoxin 100.0
KOG2244786 consensus Highly conserved protein containing a th 100.0
PF03190163 Thioredox_DsbH: Protein of unknown function, DUF25 100.0
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 99.93
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 99.91
cd02955124 SSP411 TRX domain, SSP411 protein family; members 99.85
PF07221346 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN 99.75
PF07221346 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN 99.67
COG2942388 N-acyl-D-glucosamine 2-epimerase [Carbohydrate tra 99.56
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 99.5
COG1331667 Highly conserved protein containing a thioredoxin 99.43
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 99.12
KOG2244786 consensus Highly conserved protein containing a th 98.96
cd04791321 LanC_SerThrkinase Lanthionine synthetase C-like do 98.93
PF07470336 Glyco_hydro_88: Glycosyl Hydrolase Family 88; Inte 98.8
COG2942388 N-acyl-D-glucosamine 2-epimerase [Carbohydrate tra 98.67
cd04791321 LanC_SerThrkinase Lanthionine synthetase C-like do 98.3
PF07944520 DUF1680: Putative glycosyl hydrolase of unknown fu 98.23
COG4225357 Predicted unsaturated glucuronyl hydrolase involve 98.18
PF07470336 Glyco_hydro_88: Glycosyl Hydrolase Family 88; Inte 97.99
cd02958114 UAS UAS family; UAS is a domain of unknown functio 97.92
cd02960130 AGR Anterior Gradient (AGR) family; members of thi 97.69
cd04434343 LanC_like LanC-like proteins. LanC is the cyclase 97.65
PF06662189 C5-epim_C: D-glucuronyl C5-epimerase C-terminus; I 97.64
cd04792825 LanM-like LanM-like proteins. LanM is a bifunction 97.61
PF07944 520 DUF1680: Putative glycosyl hydrolase of unknown fu 97.44
COG3533 589 Uncharacterized protein conserved in bacteria [Fun 97.36
PF1389982 Thioredoxin_7: Thioredoxin-like; PDB: 2LST_A 3PH9_ 97.26
PF06662189 C5-epim_C: D-glucuronyl C5-epimerase C-terminus; I 97.25
cd04793382 LanC LanC is the cyclase enzyme of the lanthionine 97.23
COG4225357 Predicted unsaturated glucuronyl hydrolase involve 97.23
PLN02171 629 endoglucanase 97.12
PLN02340 614 endoglucanase 97.12
PLN02345469 endoglucanase 97.1
PF00759444 Glyco_hydro_9: Glycosyl hydrolase family 9; InterP 97.01
PLN03009495 cellulase 96.99
PLN02909486 Endoglucanase 96.97
PLN00119489 endoglucanase 96.91
PF06917557 Pectate_lyase_2: Periplasmic pectate lyase; InterP 96.91
COG4403963 LcnDR2 Lantibiotic modifying enzyme [Defense mecha 96.87
PLN02308492 endoglucanase 96.85
TIGR01577616 oligosac_amyl oligosaccharide amylase. The name of 96.81
PLN02266510 endoglucanase 96.69
PTZ00470522 glycoside hydrolase family 47 protein; Provisional 96.67
KOG2787403 consensus Lanthionine synthetase C-like protein 1 96.65
PLN02613498 endoglucanase 96.65
cd04792825 LanM-like LanM-like proteins. LanM is a bifunction 96.63
COG3533 589 Uncharacterized protein conserved in bacteria [Fun 96.56
smart00594122 UAS UAS domain. 96.53
PLN02420525 endoglucanase 96.5
cd04794343 euk_LANCL eukaryotic Lanthionine synthetase C-like 96.5
cd02889348 SQCY Squalene cyclase (SQCY) domain; found in clas 96.37
cd02951125 SoxW SoxW family; SoxW is a bacterial periplasmic 96.28
cd02959117 ERp19 Endoplasmic reticulum protein 19 (ERp19) fam 96.16
cd04434343 LanC_like LanC-like proteins. LanC is the cyclase 96.1
PTZ00470 522 glycoside hydrolase family 47 protein; Provisional 96.01
cd04794343 euk_LANCL eukaryotic Lanthionine synthetase C-like 95.7
PF01532452 Glyco_hydro_47: Glycosyl hydrolase family 47; Inte 95.58
PLN02175484 endoglucanase 95.54
PF05147355 LANC_like: Lanthionine synthetase C-like protein; 95.49
cd04793382 LanC LanC is the cyclase enzyme of the lanthionine 95.16
PF01532452 Glyco_hydro_47: Glycosyl hydrolase family 47; Inte 95.1
cd02953104 DsbDgamma DsbD gamma family; DsbD gamma is the C-t 95.06
cd02991116 UAS_ETEA UAS family, ETEA subfamily; composed of p 94.92
cd02892634 SQCY_1 Squalene cyclase (SQCY) domain subgroup 1; 94.92
TIGR01507635 hopene_cyclase squalene-hopene cyclase. SHC is an 94.71
cd02896297 complement_C3_C4_C5 Proteins similar to C3, C4 and 94.61
cd02892634 SQCY_1 Squalene cyclase (SQCY) domain subgroup 1; 94.42
COG4833377 Predicted glycosyl hydrolase [Carbohydrate transpo 94.28
PLN02171629 endoglucanase 92.78
TIGR01577616 oligosac_amyl oligosaccharide amylase. The name of 92.17
KOG2204 625 consensus Mannosyl-oligosaccharide alpha-1,2-manno 92.12
COG4403963 LcnDR2 Lantibiotic modifying enzyme [Defense mecha 91.98
PRK00293571 dipZ thiol:disulfide interchange protein precursor 91.86
TIGR01535648 glucan_glucosid glucan 1,4-alpha-glucosidase. Gluc 91.81
TIGR01535648 glucan_glucosid glucan 1,4-alpha-glucosidase. Gluc 91.12
PF00759444 Glyco_hydro_9: Glycosyl hydrolase family 9; InterP 90.44
PF06202370 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR 90.34
PLN02340614 endoglucanase 89.86
PLN02308492 endoglucanase 89.77
TIGR01507635 hopene_cyclase squalene-hopene cyclase. SHC is an 89.43
cd00688300 ISOPREN_C2_like This group contains class II terpe 89.12
PF05147355 LANC_like: Lanthionine synthetase C-like protein; 88.99
PLN02993763 lupeol synthase 88.62
TIGR03463634 osq_cycl 2,3-oxidosqualene cyclase. This model ide 88.5
PLN02909486 Endoglucanase 88.25
cd02889348 SQCY Squalene cyclase (SQCY) domain; found in clas 88.09
PLN03009495 cellulase 87.64
KOG2429622 consensus Glycosyl hydrolase, family 47 [Carbohydr 87.53
KOG2431 546 consensus 1, 2-alpha-mannosidase [Carbohydrate tra 87.42
TIGR02474290 pec_lyase pectate lyase, PelA/Pel-15E family. Memb 86.35
PF05592509 Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; Int 86.35
KOG2204625 consensus Mannosyl-oligosaccharide alpha-1,2-manno 85.43
TIGR01787621 squalene_cyclas squalene/oxidosqualene cyclases. T 85.34
PF06202370 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR 85.24
PRK11509132 hydrogenase-1 operon protein HyaE; Provisional 85.17
COG2143182 Thioredoxin-related protein [Posttranslational mod 85.14
cd02950142 TxlA TRX-like protein A (TxlA) family; TxlA was or 84.31
PF06917 557 Pectate_lyase_2: Periplasmic pectate lyase; InterP 83.86
PRK11097376 endo-1,4-D-glucanase; Provisional 83.35
TIGR02474290 pec_lyase pectate lyase, PelA/Pel-15E family. Memb 83.09
COG4833377 Predicted glycosyl hydrolase [Carbohydrate transpo 81.8
KOG0366329 consensus Protein geranylgeranyltransferase type I 81.11
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=4.1e-162  Score=1345.90  Aligned_cols=605  Identities=42%  Similarity=0.710  Sum_probs=564.9

Q ss_pred             CCccCCCCHHHHHHHhccceEEeecCCCCCCHHHHHHHHHHHhcCCCCCCceEEeCCCCcceeeccccCCCCCCCCccHH
Q 005551            1 MEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFK   80 (691)
Q Consensus         1 M~~esF~d~~vA~~lN~~Fv~iKVDreerPdid~~ym~~~q~~~g~gGWPl~vfltPd~~Pf~~gTY~P~~~~~g~~gf~   80 (691)
                      |++|||+||+||++||++|||||||||||||||++||++||+|||||||||||||||||+|||+||||||++|+|+|||+
T Consensus        61 M~~ESf~d~eiA~~lN~~FV~IKVDREERPDvD~~Ym~~~q~~tG~GGWPLtVfLTPd~kPFfagTY~P~e~r~g~pGf~  140 (667)
T COG1331          61 MAHESFEDPEIAAILNENFVPVKVDREERPDVDSLYMNASQAITGQGGWPLTVFLTPDGKPFFAGTYFPKEDRYGRPGFK  140 (667)
T ss_pred             HhhhcCCCHHHHHHHHhCceeeeEChhhccCHHHHHHHHHHHhccCCCCceeEEECCCCceeeeeeecCCcccCCCcCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCHHHHHHHHHHHHhcccccCCCCCCCCCCCChhHH
Q 005551           81 TILRKVKDAWDKKRDMLAQSGAFAIEQLSEALSASASSNKLPDELPQNALRLCAEQLSKSYDSRFGGFGSAPKFPRPVEI  160 (691)
Q Consensus        81 ~~L~~i~~~w~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~~~GGfg~apKFP~~~~l  160 (691)
                      +||++|.+.|+++|++++++|+.+.+.++....+. .    +..++.+.++++++++.+.||++|||||++||||+|+.+
T Consensus       141 ~lL~~i~~~W~edr~~~~~~a~~~~~~l~~~~~~~-~----~~~l~~~~l~~~~~~l~~~~D~~~GGfg~~pKFP~~~~l  215 (667)
T COG1331         141 QLLEAIRETWREDREELLQSAERVLEALEGLARPS-A----GEELDEEVLDRAAEALARSFDREYGGFGSAPKFPPPHLL  215 (667)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHHHHHhccCCC-c----cccCChHHHHHHHHHHHHhcchhhCCcCCCCCCCChHHH
Confidence            99999999999999999999999999998765221 1    234567789999999999999999999999999999999


Q ss_pred             HHHHHhHhhhcccCCCCCcHHHHHHHHHHHHHHHhCCCcccCCCcEEEEEcCCCCCCCCCchhHHHHHHHHHHHHHHHHc
Q 005551          161 QMMLYHSKKLEDTGKSGEASEGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSL  240 (691)
Q Consensus       161 ~~Ll~~~~~~~~~~~~~~~~~~~~~~~~TL~~m~~GGi~D~v~GGF~RYsvD~~W~vPHfEKmLydnA~ll~~ya~Ay~~  240 (691)
                      .|||+++.+++       ++++++|+.+||++|+.|||||||||||||||||++|.||||||||||||+|+.+|++||++
T Consensus       216 ~~Llr~~~~~~-------d~~~~~~~~~TL~~ma~GGIyDhlgGGF~RYStD~~WlvPHFEKMLyDnA~l~~~y~~ay~~  288 (667)
T COG1331         216 LFLLRYSLRTG-------DERALDMVLRTLDAMARGGIYDHLGGGFFRYSTDREWLVPHFEKMLYDNALLLRAYAEAYRA  288 (667)
T ss_pred             HHHHHHHHhhC-------CHHHHHHHHHHHHHHHccCCccccCCceeeeecCCceechhHHHHHHHHHHHHHHHHHHHHH
Confidence            99999998754       47999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCChHHHHHHHHHHHHHHHhccCCCCceeeeccCCcccccCcccccCCceeeechHHHHHHhhhhHHHHHHHhcccCCCC
Q 005551          241 TKDVFYSYICRDILDYLRRDMIGPGGEIFSAEDADSAETEGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPTGN  320 (691)
Q Consensus       241 tg~~~y~~~A~~~~~~l~~~m~~~~Ggfysa~DADs~~~~~~~~~~EG~yY~wt~~Ei~~~l~~~~~~~~~~~~i~~~Gn  320 (691)
                      |||++|+++|++|++||+|+|++|+||||+|+||||.       ++||+||+||.+||+++||+++++||++|+|+++||
T Consensus       289 tgd~~y~~~a~~i~~~l~rel~sp~ggFyss~DAD~~-------g~EG~~Y~Ws~eEi~~~Lg~d~~~~~~~f~vs~~Gn  361 (667)
T COG1331         289 TGDDLYRRAAEGILDYLLRELYSPEGGFYSSLDADSD-------GEEGKYYTWSVEELKEVLGEDAELACKYFDVSEEGN  361 (667)
T ss_pred             hCCHHHHHHHHHHHHHHHHHhcCCCCceeecccccCc-------ccCCCeeecCHHHHHHHhcccHHHHHHHcccCCCCC
Confidence            9999999999999999999999999999999999995       699999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCccCCcceeeccCCchHHHHhcCCCHHHHHHHHHHHHHHHHhhhhcCCCCCCCcchhhchHHHHHHHHHH
Q 005551          321 CDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLVISSFAR  400 (691)
Q Consensus       321 ~~~~~~~d~~~~~~g~nvL~~~~~~~~~a~~~g~~~~~~~~~l~~~~~~L~~~R~~R~~P~~Ddkilt~WNal~i~aLa~  400 (691)
                                  |+|+||||+..+.++ +      +++..++++.+|+||+.+|++|++|++||||+|+|||+||.||+.
T Consensus       362 ------------feGrnvL~~~~~~~~-~------~~~~~~~l~~~r~kL~~~R~~R~~P~~Ddkvlt~wNglmi~aLa~  422 (667)
T COG1331         362 ------------FEGRNVLHVPGPLEE-A------IEEAEEKLERAREKLLAAREKRKQPSRDDKVLTDWNGLMIAALAE  422 (667)
T ss_pred             ------------cCCceeecccCchhh-h------hhhhHHHHHHHHHHHHHHHHhCCCCCCCcceeeccHHHHHHHHHH
Confidence                        689999999988776 2      788999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEEecCCCCCCCCCcccHHHHHHHHHHHHHH
Q 005551          401 ASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPSKAPGFLDDYAFLISGLLDLYEF  480 (691)
Q Consensus       401 a~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~~g~~~~~~~l~DyA~li~all~Ly~~  480 (691)
                      |+++++|                ++|++.|+++++||.+++++   +++.|.+++|.....++++|||++|.|+|+||++
T Consensus       423 a~~~~~d----------------~~~l~~A~~~~~fi~~~l~~---~rl~~~~~~G~a~~~g~leDYA~~i~gll~lye~  483 (667)
T COG1331         423 AGRVLGD----------------PEYLEAAERAADFILDNLYV---DRLLRRYRGGEAAVAGLLEDYAFLILGLLALYEA  483 (667)
T ss_pred             HHHHcCC----------------hHHHHHHHHHHHHHHHhhcc---cchheeeecCcccccccchhHHHHHHHHHHHHHh
Confidence            9999999                89999999999999999997   3899999999999999999999999999999999


Q ss_pred             cCChHHHHHHHHHHHHHHHhcccccCCccccCCCCCCccccccccCCCCCCCChHHHHHHHHHHHHHHhCCCCchHHHHH
Q 005551          481 GSGTKWLVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAGSKSDYYRQN  560 (691)
Q Consensus       481 Tgd~~~L~~A~~L~~~~~~~F~D~~~Gg~f~~~~~~~~l~~r~~~~~D~a~PS~nsv~a~~LlrL~~lt~~~~~~~y~~~  560 (691)
                      |+|.+||+.|++|++.++++|||++ ||||+++..++.+++|+++..|+++||+||+++.+|++|+.+||+   ..|.+.
T Consensus       484 t~d~~yL~~A~~L~~~~i~~f~d~~-gGf~~t~~~~~~l~ir~~~~~D~a~~S~na~~~~~L~~Ls~ltg~---~~y~e~  559 (667)
T COG1331         484 TGDLAYLEKAIELADEAIADFWDDE-GGFYDTPSDSEDLLIRPKEPTDGATPSGNAVAAQALLRLSLLTGD---ARYLEA  559 (667)
T ss_pred             hCcHHHHHHHHHHHHHHHHHhcCCC-CCcccCCCcccccccCCCCCCCCCCCCHHHHHHHHHHHHHhhcCc---hhHHHH
Confidence            9999999999999999999999998 779999999999999999999999999999999999999999996   789999


Q ss_pred             HHHHHHHHHHHHHhhhhhHHHHHHHHHHhcCCCccEEEEecCCCChhHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhhh
Q 005551          561 AEHSLAVFETRLKDMAMAVPLMCCAADMLSVPSRKHVVLVGHKSSVDFENMLAAAHASYDLNKTVIHIDPADTEEMDFWE  640 (691)
Q Consensus       561 A~~~l~~~~~~i~~~p~~~~~~~~a~~~~~~~~~~~vvivg~~~~~~~~~l~~~~~~~~~P~~~v~~~~~~~~~~~~~~~  640 (691)
                      |+++|++|++.+.++|.+++.++.+++.+..+ +.+|||+|.    ...++++++.+.|+|+++|++...+.        
T Consensus       560 A~~~L~a~~~~~~~~p~~~~~~~~a~~~~~~~-~~~ivvv~~----~~~~~~~~~~~~~~P~~~l~~~~~~~--------  626 (667)
T COG1331         560 AEDILQAFAGLAERAPFAHAGLLLAAEFLISG-PLVIVVAGD----PRSELLRAALRLYLPEKVLVVGTEGY--------  626 (667)
T ss_pred             HHHHHHHHHHHHHhCCccchHHHHHHHHHcCC-ceEEEEeCC----CcHHHHHHHHhcCCcceEEEEecccc--------
Confidence            99999999999999999999999999998876 588888882    34579999999999999999864321        


Q ss_pred             hccccchhhhhccCCCCccEEEEccCCccCCCCCCHHHHHHHhhc
Q 005551          641 EHNSNNASMARNNFSADKVVALVCQNFSCSPPVTDPISLENLLLE  685 (691)
Q Consensus       641 ~~~~~~~~~~~~~~~~~~~~ayvC~~~~C~~Pvt~~~~l~~~L~~  685 (691)
                           +.++.+....+++ ++|||++++|++|++++++|.++|..
T Consensus       627 -----~~~~~~~~l~~g~-~ayvC~~~~C~~P~~~~e~l~~~l~~  665 (667)
T COG1331         627 -----VSLLVDGMLGGGK-TAYVCTGDACLPPVTSPEELAELLAV  665 (667)
T ss_pred             -----cCcchhhccCCCC-eEEEecCCccCCCcCCHHHHHHHHhh
Confidence                 1112221122445 99999999999999999999999864

>KOG2244 consensus Highly conserved protein containing a thioredoxin domain [General function prediction only] Back     alignment and domain information
>PF03190 Thioredox_DsbH: Protein of unknown function, DUF255; InterPro: IPR004879 This is a group of uncharacterised proteins Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>cd02955 SSP411 TRX domain, SSP411 protein family; members of this family are highly conserved proteins present in eukaryotes, bacteria and archaea, about 600-800 amino acids in length, which contain a TRX domain with a redox active CXXC motif Back     alignment and domain information
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 Back     alignment and domain information
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 Back     alignment and domain information
>COG2942 N-acyl-D-glucosamine 2-epimerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>KOG2244 consensus Highly conserved protein containing a thioredoxin domain [General function prediction only] Back     alignment and domain information
>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases Back     alignment and domain information
>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [] Back     alignment and domain information
>COG2942 N-acyl-D-glucosamine 2-epimerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases Back     alignment and domain information
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information
>COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only] Back     alignment and domain information
>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [] Back     alignment and domain information
>cd02958 UAS UAS family; UAS is a domain of unknown function Back     alignment and domain information
>cd02960 AGR Anterior Gradient (AGR) family; members of this family are similar to secreted proteins encoded by the cement gland-specific genes XAG-1 and XAG-2, expressed in the anterior region of dorsal ectoderm of Xenopus Back     alignment and domain information
>cd04434 LanC_like LanC-like proteins Back     alignment and domain information
>PF06662 C5-epim_C: D-glucuronyl C5-epimerase C-terminus; InterPro: IPR010598 This entry consists of known or predicted D-glucuronyl C5-epimerases which share a common C-terminal region Back     alignment and domain information
>cd04792 LanM-like LanM-like proteins Back     alignment and domain information
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information
>COG3533 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF13899 Thioredoxin_7: Thioredoxin-like; PDB: 2LST_A 3PH9_A 1UC7_A 2JU5_A 1VRS_D 2FWG_A 2FWF_A 2FWH_A 2FWE_A 3FK8_A Back     alignment and domain information
>PF06662 C5-epim_C: D-glucuronyl C5-epimerase C-terminus; InterPro: IPR010598 This entry consists of known or predicted D-glucuronyl C5-epimerases which share a common C-terminal region Back     alignment and domain information
>cd04793 LanC LanC is the cyclase enzyme of the lanthionine synthetase Back     alignment and domain information
>COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only] Back     alignment and domain information
>PLN02171 endoglucanase Back     alignment and domain information
>PLN02340 endoglucanase Back     alignment and domain information
>PLN02345 endoglucanase Back     alignment and domain information
>PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PLN03009 cellulase Back     alignment and domain information
>PLN02909 Endoglucanase Back     alignment and domain information
>PLN00119 endoglucanase Back     alignment and domain information
>PF06917 Pectate_lyase_2: Periplasmic pectate lyase; InterPro: IPR010702 This family consists of several Enterobacterial periplasmic pectate lyase proteins Back     alignment and domain information
>COG4403 LcnDR2 Lantibiotic modifying enzyme [Defense mechanisms] Back     alignment and domain information
>PLN02308 endoglucanase Back     alignment and domain information
>TIGR01577 oligosac_amyl oligosaccharide amylase Back     alignment and domain information
>PLN02266 endoglucanase Back     alignment and domain information
>PTZ00470 glycoside hydrolase family 47 protein; Provisional Back     alignment and domain information
>KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms] Back     alignment and domain information
>PLN02613 endoglucanase Back     alignment and domain information
>cd04792 LanM-like LanM-like proteins Back     alignment and domain information
>COG3533 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>smart00594 UAS UAS domain Back     alignment and domain information
>PLN02420 endoglucanase Back     alignment and domain information
>cd04794 euk_LANCL eukaryotic Lanthionine synthetase C-like protein Back     alignment and domain information
>cd02889 SQCY Squalene cyclase (SQCY) domain; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold Back     alignment and domain information
>cd02951 SoxW SoxW family; SoxW is a bacterial periplasmic TRX, containing a redox active CXXC motif, encoded by a genetic locus (sox operon) involved in thiosulfate oxidation Back     alignment and domain information
>cd02959 ERp19 Endoplasmic reticulum protein 19 (ERp19) family; ERp19 is also known as ERp18, a protein located in the ER containing one redox active TRX domain Back     alignment and domain information
>cd04434 LanC_like LanC-like proteins Back     alignment and domain information
>PTZ00470 glycoside hydrolase family 47 protein; Provisional Back     alignment and domain information
>cd04794 euk_LANCL eukaryotic Lanthionine synthetase C-like protein Back     alignment and domain information
>PF01532 Glyco_hydro_47: Glycosyl hydrolase family 47; InterPro: IPR001382 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PLN02175 endoglucanase Back     alignment and domain information
>PF05147 LANC_like: Lanthionine synthetase C-like protein; InterPro: IPR007822 The LanC-like protein superfamily encompasses a highly divergent group of peptide-modifying enzymes, including the eukaryotic and bacterial lanthionine synthetase C-like proteins (LanC) [, , ]; subtilin biosynthesis protein SpaC from Bacillus subtilis [, ]; epidermin biosynthesis protein EpiC from Staphylococcus epidermidis []; nisin biosynthesis protein NisC from Lactococcus lactis [, , ]; GCR2 from Arabidopsis thaliana []; and many others Back     alignment and domain information
>cd04793 LanC LanC is the cyclase enzyme of the lanthionine synthetase Back     alignment and domain information
>PF01532 Glyco_hydro_47: Glycosyl hydrolase family 47; InterPro: IPR001382 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd02953 DsbDgamma DsbD gamma family; DsbD gamma is the C-terminal periplasmic domain of the bacterial protein DsbD Back     alignment and domain information
>cd02991 UAS_ETEA UAS family, ETEA subfamily; composed of proteins similar to human ETEA protein, the translation product of a highly expressed gene in the T-cells and eosinophils of atopic dermatitis patients compared with those of normal individuals Back     alignment and domain information
>cd02892 SQCY_1 Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold Back     alignment and domain information
>TIGR01507 hopene_cyclase squalene-hopene cyclase Back     alignment and domain information
>cd02896 complement_C3_C4_C5 Proteins similar to C3, C4 and C5 of vertebrate complement Back     alignment and domain information
>cd02892 SQCY_1 Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold Back     alignment and domain information
>COG4833 Predicted glycosyl hydrolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02171 endoglucanase Back     alignment and domain information
>TIGR01577 oligosac_amyl oligosaccharide amylase Back     alignment and domain information
>KOG2204 consensus Mannosyl-oligosaccharide alpha-1,2-mannosidase and related glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG4403 LcnDR2 Lantibiotic modifying enzyme [Defense mechanisms] Back     alignment and domain information
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional Back     alignment and domain information
>TIGR01535 glucan_glucosid glucan 1,4-alpha-glucosidase Back     alignment and domain information
>TIGR01535 glucan_glucosid glucan 1,4-alpha-glucosidase Back     alignment and domain information
>PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF06202 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR010401 This family includes human glycogen branching enzyme P35573 from SWISSPROT Back     alignment and domain information
>PLN02340 endoglucanase Back     alignment and domain information
>PLN02308 endoglucanase Back     alignment and domain information
>TIGR01507 hopene_cyclase squalene-hopene cyclase Back     alignment and domain information
>cd00688 ISOPREN_C2_like This group contains class II terpene cyclases, protein prenyltransferases beta subunit, two broadly specific proteinase inhibitors alpha2-macroglobulin (alpha (2)-M) and pregnancy zone protein (PZP) and, the C3 C4 and C5 components of vertebrate complement Back     alignment and domain information
>PF05147 LANC_like: Lanthionine synthetase C-like protein; InterPro: IPR007822 The LanC-like protein superfamily encompasses a highly divergent group of peptide-modifying enzymes, including the eukaryotic and bacterial lanthionine synthetase C-like proteins (LanC) [, , ]; subtilin biosynthesis protein SpaC from Bacillus subtilis [, ]; epidermin biosynthesis protein EpiC from Staphylococcus epidermidis []; nisin biosynthesis protein NisC from Lactococcus lactis [, , ]; GCR2 from Arabidopsis thaliana []; and many others Back     alignment and domain information
>PLN02993 lupeol synthase Back     alignment and domain information
>TIGR03463 osq_cycl 2,3-oxidosqualene cyclase Back     alignment and domain information
>PLN02909 Endoglucanase Back     alignment and domain information
>cd02889 SQCY Squalene cyclase (SQCY) domain; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold Back     alignment and domain information
>PLN03009 cellulase Back     alignment and domain information
>KOG2429 consensus Glycosyl hydrolase, family 47 [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2431 consensus 1, 2-alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02474 pec_lyase pectate lyase, PelA/Pel-15E family Back     alignment and domain information
>PF05592 Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; InterPro: IPR008902 This entry consists of bacterial rhamnosidase A and B enzymes Back     alignment and domain information
>KOG2204 consensus Mannosyl-oligosaccharide alpha-1,2-mannosidase and related glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01787 squalene_cyclas squalene/oxidosqualene cyclases Back     alignment and domain information
>PF06202 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR010401 This family includes human glycogen branching enzyme P35573 from SWISSPROT Back     alignment and domain information
>PRK11509 hydrogenase-1 operon protein HyaE; Provisional Back     alignment and domain information
>COG2143 Thioredoxin-related protein [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd02950 TxlA TRX-like protein A (TxlA) family; TxlA was originally isolated from the cyanobacterium Synechococcus Back     alignment and domain information
>PF06917 Pectate_lyase_2: Periplasmic pectate lyase; InterPro: IPR010702 This family consists of several Enterobacterial periplasmic pectate lyase proteins Back     alignment and domain information
>PRK11097 endo-1,4-D-glucanase; Provisional Back     alignment and domain information
>TIGR02474 pec_lyase pectate lyase, PelA/Pel-15E family Back     alignment and domain information
>COG4833 Predicted glycosyl hydrolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG0366 consensus Protein geranylgeranyltransferase type II, beta subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query691
3ira_A173 The Crystal Structure Of One Domain Of The Conserve 2e-23
>pdb|3IRA|A Chain A, The Crystal Structure Of One Domain Of The Conserved Protein From Methanosarcina Mazei Go1 Length = 173 Back     alignment and structure 
Iteration: 1

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 46/101 (45%), Positives = 68/101 (67%)
Query: 1   MEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLK 60
           M  ESFEDE VA L+N+ FVSIKVDREERPD+D +YMT  Q + G GGWPL++ ++P  K
Sbjct: 57  MAHESFEDEEVAGLMNEAFVSIKVDREERPDIDNIYMTVCQIILGRGGWPLNIIMTPGKK 116
Query: 61  PLMGGTYFPPEDKYGRPGFKTILRKVKDAWDKKRDMLAQSG 101
           P   GTY P   ++ + G   ++ ++K+ W+++ + +  S 
Sbjct: 117 PFFAGTYIPKNTRFNQIGMLELVPRIKEIWEQQHEEVLDSA 157

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query691
3ira_A173 Conserved protein; methanosarcina mazei,structural 5e-59
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 3e-21
2ju5_A154 Thioredoxin disulfide isomerase; protein, oxidored 5e-21
3f9u_A172 Putative exported cytochrome C biogenesis-related; 1e-14
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 2e-14
1sen_A164 Thioredoxin-like protein P19; endoplasmic reticulu 9e-13
3ph9_A151 Anterior gradient protein 3 homolog; thioredoxin f 8e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-04
3fk8_A133 Disulphide isomerase; APC61824.1, xylella fastidio 1e-08
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 8e-08
2lst_A130 Thioredoxin; structural genomics, NEW YORK structu 7e-06
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei} Length = 173 Back     alignment and structure
 Score =  195 bits (498), Expect = 5e-59
 Identities = 48/116 (41%), Positives = 73/116 (62%)

Query: 1   MEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLK 60
           M  ESFEDE VA L+N+ FVSIKVDREERPD+D +YMT  Q + G GGWPL++ ++P  K
Sbjct: 57  MAHESFEDEEVAGLMNEAFVSIKVDREERPDIDNIYMTVCQIILGRGGWPLNIIMTPGKK 116

Query: 61  PLMGGTYFPPEDKYGRPGFKTILRKVKDAWDKKRDMLAQSGAFAIEQLSEALSASA 116
           P   GTY P   ++ + G   ++ ++K+ W+++ + +  S       + E +  S+
Sbjct: 117 PFFAGTYIPKNTRFNQIGMLELVPRIKEIWEQQHEEVLDSAEKITSTIQEMIKESS 172
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Length = 388 Back     alignment and structure
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae} Length = 154 Back     alignment and structure
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343} Length = 172 Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Length = 402 Back     alignment and structure
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A Length = 164 Back     alignment and structure
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} Length = 151 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa} Length = 133 Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Length = 402 Back     alignment and structure
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus} Length = 130 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 691
d1fp3a_402 a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {P 1e-32
d2afaa1411 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {S 3e-17
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Length = 402 Back     information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: N-acylglucosamine (NAG) epimerase
domain: N-acyl-D-glucosamine 2-epimerase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score =  128 bits (323), Expect = 1e-32
 Identities = 44/403 (10%), Positives = 93/403 (23%), Gaps = 71/403 (17%)

Query: 137 LSKSYDSRFGGF-------GSAPKFPRPVEIQM-MLYHSKKLEDTGKSGEASEGQKMVLF 188
           L  S+D   GGF       G      + V +Q   ++   +L    +     E       
Sbjct: 27  LEHSHDREHGGFFTCLGRDGRVYDDLKYVWLQGRQVWMYCRLYRKLERFHRPELLDAAKA 86

Query: 189 TLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSY 248
             + + +             + +         ++ ++ +        + + +T +  Y  
Sbjct: 87  GGEFLLRHARVAPPEKKCA-FVLTRDGRPVKVQRSIFSECFYTMAMNELWRVTAEARYQS 145

Query: 249 ICRDILDYLRRDMIGPGGEIFSAEDADSAETEGATRKKEGAFYVWTSKEVEDILGEHAIL 308
              D++D +   +      +   +   +          E          + + LGE    
Sbjct: 146 EAVDMMDQIVHWVREDPSGLGRPQLPGA-------VASESMAVPMMLLCLVEQLGEEDEE 198

Query: 309 FKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLEKYLNILGECRR 368
               Y     G+    R+                                          
Sbjct: 199 LAGRY--AQLGHWCARRILQHVQRDGQ-------------------------------AV 225

Query: 369 KLFDVRSKRPRPHLDDKVIVSWNGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYME 428
                           +     + L    F              +        D K    
Sbjct: 226 LENVSEDGEELSGCLGRHQNPGHALEAGWF--------------LLRHSSRSGDAKLRAH 271

Query: 429 VAESAASFIRRHLYDEQTHRLQHSFRNGPSKAPGFLDD-------YAFLISGLLDLYEFG 481
           V ++      R  +D   H     F++     P  L+        ++  +   L  Y   
Sbjct: 272 VIDTFLLLPFRSGWDAD-HGGLFYFQDADGLCPTQLEWAMKLWWPHSEAMIAFLMGYSES 330

Query: 482 SGTKWLVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVK 524
                L    ++       F D E G +F     +  V L +K
Sbjct: 331 GDPALLRLFYQVAEYTFRQFRDPEYGEWFGYLNREGKVALTIK 373
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Length = 411 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query691
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 100.0
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 100.0
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 99.92
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 99.85
d2d5ja1377 Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 99.64
d1nc5a_363 Hypothetical protein YteR {Bacillus subtilis [TaxI 99.26
d2d5ja1377 Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 99.11
d1nc5a_363 Hypothetical protein YteR {Bacillus subtilis [TaxI 98.57
d1g87a1454 Endo/exocellulase:cellobiose E-4, N-terminal domai 98.49
d1ia6a_431 Nonprocessive cellulase Cel9M {Clostridium cellulo 98.45
d1ks8a_433 Endo-b-1,4-glucanase {Termite (Nasutitermes takasa 98.41
d2dlxa1147 UBX domain-containing protein 7 {Human (Homo sapie 98.27
d1sena_135 Thioredoxin-like protein p19, TLP19 {Human (Homo s 98.13
d1tf4a1460 Endo/exocellulase:cellobiose E-4, N-terminal domai 98.13
d1ut9a1511 Cellulose 1,4-beta-cellobiosidase CbhA {Clostridiu 97.99
d1clca1441 CelD cellulase, C-terminal domain {Clostridium the 97.85
d1nxca_467 Class I alpha-1;2-mannosidase, catalytic domain {M 97.59
d1nxca_467 Class I alpha-1;2-mannosidase, catalytic domain {M 97.5
d1x9da1453 Class I alpha-1;2-mannosidase, catalytic domain {H 97.31
d1x9da1453 Class I alpha-1;2-mannosidase, catalytic domain {H 97.07
d1dl2a_511 Class I alpha-1;2-mannosidase, catalytic domain {B 96.97
d1ia6a_431 Nonprocessive cellulase Cel9M {Clostridium cellulo 96.95
d1dl2a_511 Class I alpha-1;2-mannosidase, catalytic domain {B 96.45
d1w6ka1448 Lanosterol synthase {Human (Homo sapiens) [TaxId: 96.24
d1ut9a1511 Cellulose 1,4-beta-cellobiosidase CbhA {Clostridiu 96.1
d1hcua_488 Class I alpha-1;2-mannosidase, catalytic domain {T 95.77
d2ri9a1475 Class I alpha-1;2-mannosidase, catalytic domain {F 95.6
d1hcua_488 Class I alpha-1;2-mannosidase, catalytic domain {T 95.54
d2g0da1409 Nisin biosynthesis protein NisC {Lactococcus lacti 95.05
d2fwha1117 Thiol:disulfide interchange protein DsbD, C-termin 94.54
d2ri9a1475 Class I alpha-1;2-mannosidase, catalytic domain {F 94.33
d2sqca1352 Squalene-hopene cyclase {Alicyclobacillus acidocal 94.05
d1wzza1319 Probable endoglucanase CmcAX {Acetobacter xylinus 90.88
d1gxma_324 Polygalacturonic acid lyase (pectate lyase) {Cellv 88.38
d1ks8a_433 Endo-b-1,4-glucanase {Termite (Nasutitermes takasa 85.74
d1qgva_137 spliceosomal protein U5-15Kd {Human (Homo sapiens) 85.68
d2trxa_108 Thioredoxin {Escherichia coli [TaxId: 562]} 83.33
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: N-acylglucosamine (NAG) epimerase
domain: N-acyl-D-glucosamine 2-epimerase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=3e-43  Score=297.58  Aligned_cols=351  Identities=12%  Similarity=0.000  Sum_probs=254.6

Q ss_pred             HHHHHHHHHH-CCCCCCCCCCC----------CCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf             9999999984-03366999899----------999998359999999475201268998768899999999999780897
Q 005551          130 LRLCAEQLSK-SYDSRFGGFGS----------APKFPRPVEIQMMLYHSKKLEDTGKSGEASEGQKMVLFTLQCMAKGGI  198 (691)
Q Consensus       130 ~~~~~~~~~~-~~D~~~GGfg~----------apKFP~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~tL~~m~~GGi  198 (691)
                      |+.++..|.+ .+|.++|||-+          .||+.... -+.+.-++..... +...+++..+++|.++++.|..+++
T Consensus        19 l~~ilpfW~~~~~D~~~GGf~~~ld~dg~~~~~~k~~~~~-~R~l~~fs~a~~~-~~~~~~~~~~~~a~~g~~~L~~~~~   96 (402)
T d1fp3a_          19 LDRVMAFWLEHSHDREHGGFFTCLGRDGRVYDDLKYVWLQ-GRQVWMYCRLYRK-LERFHRPELLDAAKAGGEFLLRHAR   96 (402)
T ss_dssp             HHHHHHHHHHHSBCTTTSSBCCCBCTTSCBSCCCEEHHHH-HHHHHHHHHHHHH-CGGGCCHHHHHHHHHHHHHHHHHTB
T ss_pred             HHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEE-HHHHHHHHHHHHH-HCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf             9999987885580767897214378999857988636554-9999999999997-4634898999999999999998188


Q ss_pred             CCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC
Q ss_conf             22589928998728997799983169899999999999997049928999999999999872458898545402577653
Q 005551          199 HDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMIGPGGEIFSAEDADSAE  278 (691)
Q Consensus       199 ~D~~~GGF~RYsvD~~W~vPhfEKmLydnA~ll~~y~~Ay~~t~~~~y~~~a~~~~~~l~~~l~~~~Ggf~ss~DADs~~  278 (691)
                      +|+.+|||+ ||||.+|.++|++||+||||+++.+|+++|++||++.|+++|.++++++.++|+++.||||++.|+|+. 
T Consensus        97 ~d~~~Gg~~-~~vd~dG~~~~~~k~~Yd~Af~l~a~a~~~~~tg~~~~~~~a~~~~~~i~~~~~~~~~g~~~~~~~~~~-  174 (402)
T d1fp3a_          97 VAPPEKKCA-FVLTRDGRPVKVQRSIFSECFYTMAMNELWRVTAEARYQSEAVDMMDQIVHWVREDPSGLGRPQLPGAV-  174 (402)
T ss_dssp             SSTTSCCBC-SEECTTSCEEECCSSSHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTCGGGGCCCCCTTSC-
T ss_pred             CCCCCCCEE-EEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC-
T ss_conf             358999889-887899996765456412089999989988603998999999999999999842156888741247875-


Q ss_pred             CCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHCCCCHHH
Q ss_conf             35755555772243156899998403499999882446799767887889988668863000248924789860999899
Q 005551          279 TEGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLEK  358 (691)
Q Consensus       279 ~~~~~~~~EG~yY~wt~~Ei~~~l~~~~~~~~~~~~i~~~Gn~~~~~~~d~~~~~~g~nvL~~~~~~~~~a~~~g~~~~~  358 (691)
                            +.+|.+|.|...|+..+|++........+........+  ...+ +-..+...++                   
T Consensus       175 ------~~~g~~~~m~l~ea~~~l~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~-------------------  226 (402)
T d1fp3a_         175 ------ASESMAVPMMLLCLVEQLGEEDEELAGRYAQLGHWCAR--RILQ-HVQRDGQAVL-------------------  226 (402)
T ss_dssp             ------CEEETHHHHHHHHHHHHHHTTCHHHHHHTHHHHHHHHH--HHHT-TEETTTTEEC-------------------
T ss_pred             ------CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH--HHHH-HCCCCCHHHH-------------------
T ss_conf             ------43435417999999999734343057999999999999--8875-0165412577-------------------


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHHHHHHH-HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH-HHH
Q ss_conf             99999999999986440599997785002411999999999-9999820222210036777899929999999999-999
Q 005551          359 YLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLVISSFA-RASKILKSEAESAMFNFPVVGSDRKEYMEVAESA-ASF  436 (691)
Q Consensus       359 ~~~~l~~~~~kL~~~R~~R~~P~~Ddkiit~WNal~i~aLa-~a~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~-~~~  436 (691)
                                 .+..+..++.|..|+|+++.||++++..|+ +++.++++                +.++..|.+. ..+
T Consensus       227 -----------e~~~~~~~~~~~~~~~~i~pGh~~e~~wLll~a~~~~~~----------------~~~~~~a~~~~~~~  279 (402)
T d1fp3a_         227 -----------ENVSEDGEELSGCLGRHQNPGHALEAGWFLLRHSSRSGD----------------AKLRAHVIDTFLLL  279 (402)
T ss_dssp             -----------SEEETTSCBCCHHHHHEECHHHHHHHHHHHHHHHHHTTC----------------HHHHHHHHHHHTHH
T ss_pred             -----------HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC----------------CHHHHHHHHHHHHH
T ss_conf             -----------643146676668344727850235999999999987399----------------04799999999999


Q ss_pred             HHHHCCCCCCCEEEEE-ECCCCCC-----CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             9985454699938988-3289878-----887721099999999999998299689999999999999862544588666
Q 005551          437 IRRHLYDEQTHRLQHS-FRNGPSK-----APGFLDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDREGGGYF  510 (691)
Q Consensus       437 l~~~~~d~~~g~l~~~-~~~g~~~-----~~~~leDyA~~i~all~LY~aTgd~~~L~~A~~L~~~~~~~f~D~~~Ggyf  510 (691)
                      +.++.||++.|++++. ..+|.+.     ..+.+++||++|.|++.+|++|||+.|+++|.++++.+.++|+|+++|+||
T Consensus       280 ~~~~g~d~~~ggl~~~~~~~g~~~~~~~~~~k~~W~qaE~i~a~l~ly~~tgd~~~l~~a~~l~~~~~~~f~D~~~G~W~  359 (402)
T d1fp3a_         280 PFRSGWDADHGGLFYFQDADGLCPTQLEWAMKLWWPHSEAMIAFLMGYSESGDPALLRLFYQVAEYTFRQFRDPEYGEWF  359 (402)
T ss_dssp             HHHHHBCTTTCSBCSCEETTSCCCSSTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCTTTSSBC
T ss_pred             HHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEE
T ss_conf             99829557899588875378886655441377787899999999999870499899999999999999868779997667


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             578999863344456899999883999999
Q 005551          511 NTTGEDPSVLLRVKEDHDGAEPSGNSVSVI  540 (691)
Q Consensus       511 ~t~~~~~~l~~r~k~~~D~a~PS~nsv~~~  540 (691)
                      +.-..++.++...|.. -...|.++..++.
T Consensus       360 ~~~~~~g~~~~~~k~~-p~~~~YH~~ral~  388 (402)
T d1fp3a_         360 GYLNREGKVALTIKGG-PFKGCFHVPRCLA  388 (402)
T ss_dssp             CEECTTSCEEECCSSC-SSCCSSHHHHHHH
T ss_pred             EEECCCCCCCCCCCCC-CCCCCCHHHHHHH
T ss_conf             4389998998667788-8898461899999
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]} Back     information, alignment and structure
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]} Back     information, alignment and structure
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Back     information, alignment and structure
>d2dlxa1 c.47.1.24 (A:1-147) UBX domain-containing protein 7 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sena_ c.47.1.1 (A:) Thioredoxin-like protein p19, TLP19 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1nxca_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1nxca_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1x9da1 a.102.2.1 (A:245-697) Class I alpha-1;2-mannosidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1x9da1 a.102.2.1 (A:245-697) Class I alpha-1;2-mannosidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1dl2a_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1dl2a_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1w6ka1 a.102.4.2 (A:6-99,A:379-732) Lanosterol synthase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1hcua_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d2ri9a1 a.102.2.1 (A:1036-1510) Class I alpha-1;2-mannosidase, catalytic domain {Fungus (Penicillium citrinum) [TaxId: 5077]} Back     information, alignment and structure
>d1hcua_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d2g0da1 a.102.6.1 (A:7-415) Nisin biosynthesis protein NisC {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
>d2fwha1 c.47.1.1 (A:428-544) Thiol:disulfide interchange protein DsbD, C-terminal domain (DsbD-gamma) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ri9a1 a.102.2.1 (A:1036-1510) Class I alpha-1;2-mannosidase, catalytic domain {Fungus (Penicillium citrinum) [TaxId: 5077]} Back     information, alignment and structure
>d2sqca1 a.102.4.2 (A:8-36,A:308-630) Squalene-hopene cyclase {Alicyclobacillus acidocaldarius [TaxId: 405212]} Back     information, alignment and structure
>d1wzza1 a.102.1.2 (A:23-341) Probable endoglucanase CmcAX {Acetobacter xylinus [TaxId: 28448]} Back     information, alignment and structure
>d1gxma_ a.102.5.1 (A:) Polygalacturonic acid lyase (pectate lyase) {Cellvibrio cellulosa [TaxId: 155077]} Back     information, alignment and structure
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Back     information, alignment and structure
>d1qgva_ c.47.1.8 (A:) spliceosomal protein U5-15Kd {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2trxa_ c.47.1.1 (A:) Thioredoxin {Escherichia coli [TaxId: 562]} Back     information, alignment and structure