Citrus Sinensis ID: 005556

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-
Protein Sequence
MEMQFEIKLNILASSIFVKGDLTLFWNIQEDDSMSLYGVQEIVYRNKSKIEGGQSSRDPQEHEKYRRHLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHLTGKSEPSRHVPGAALKMQRELQWFKLAKNLVHPQFREAENKLEQTPTEVFTKEHKELAKEGEKWMKETASSCSVVAALIVTVVFAASFTVPGGHDGRGIPNLLHEPSFMIFAISDMLALFSSITSVLMFLGILTSQYAEEEFLESLPRMLIIGLVTLFFSIASMMVAFGATVHISLHHKWNLVFIPIALVGLVPVTLFAFLQFPLLVDMCSSTYCRGIFIESSWRELNSRKIDAKGKYKKKSYQS
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHcccccccccHHHcccccccHHHHHHHHccccccEEcccccccccccccccccHHHHHHHHcccHHHHHHHHHHcHHHHHHHccccccccHHHHHHccccccccccccHHHHHHHHHccccccccccccccccccHHHHHHHHcccHHHHHHHHHcccHHHccccccccHHHHHHHHHccHHHHHHHHHHcccccccccccccccHHHHHHHHcccHHHHHHHHHHcccccccccccccHHHHHHHccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHcccHHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEEEEHHcEEEEcccEEEEEEEcccccHEEEEHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHccHHHHHHHHHHccccccccEEEHEEccccHHHHHHHHHHHHHcccccHHHHHHccccccccHHHHHHHHccHHHHHHHHHHcccHHHccccccccHHHHHHHcccHHHHHHHHHHcccHHHcccccccccHHHHHHHHHcHHHHHHHHHHHcccHccccccccccHHHHHccccHccccccccHHHHHHHHHcccHHccccccccHHHccccHHHcccHHHHHHHHHHHHHHHHHHHHHcccccHHHccccHHHHHHHHHHHHHHHHHHHHHcHHHcccccHHHHHHHHHcHHHHHHHHHHHccHHHHHcccccccHEHHHHHccHHHHHHHHHHcccHHHHHEEcccccccHHHHHccccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHEEEHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MEMQFEIKLNILASSifvkgdltlfwniqeddsmslyGVQEIVYRnkskieggqssrdpqehEKYRRHLELYRMIQMndwqsvdgfVQSNTDILKEHNFLGRSLTIFHLIMGLLvdvetddeATDLIDKLAQstdvdisetlsckdgggntVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLleetpgrvenfycggdggRLLSDLIKANLYDVALNLLknhpeivhdidsqkmaldslalkpyafesgsrlgclegfiykcipvtkqlsqtndnpnvagdtengigttnghskksipygstqqittydakwpcFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFtatrlgipeFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISledksgnnilhltgksepsrhvpgAALKMQRELQWFKLAKNlvhpqfreaenkleqtpteVFTKEHKELAKEGEKWMKETASSCSVVAALIVTVVFAAsftvpgghdgrgipnllhepsfMIFAISDMLALFSSITSVLMFLGILTSQYAEEEFLESLPRMLIIGLVTLFFSIASMMVAFGATVHISLHHKWNLVFIPIALVGLVPVTLFAFLQFPLLVDMCSSTYCRGIFIESSWRELNSRKidakgkykkksyqs
Flexible Loop (DISEMBL)
MEMQFEIKLNILASSIFVKGDLTLFWNIQEDDSMSLYGVQEIVYRnkskieggqssrdpqeheKYRRHLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLaqstdvdisetlsckdgggnTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTengigttnghskksipyGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHLTGKSEPSRHVPGAALKMQRELQWFKLAKNLVHPQFREaenkleqtptevftKEHKELAKEGEKWMKETASSCSVVAALIVTVVFAASFTVPGGHDGRGIPNLLHEPSFMIFAISDMLALFSSITSVLMFLGILTSQYAEEEFLESLPRMLIIGLVTLFFSIASMMVAFGATVHISLHHKWNLVFIPIALVGLVPVTLFAFLQFPLLVDMCSSTYCRGIFIesswrelnsrkidakgkykkksyqs
Low Complexity Region (SEG)
MEMQFEIKLNILASSIFVKGDLTLFWNIQEDDSMSLYGVQEIVYRNKSKIEGGQSSRDPQEHEKYRRHLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHLTGKSEPSRHVPGAALKMQRELQWFKLAKNLVHPQFREAENKLEQTPTEVFTKEHKELAKEGEKWMKETASSCSVVAALIVTVVFAASFTVPGGHDGRGIPNLLHEPSFMIFAISDMLALFSSITSVLMFLGILTSQYAEEEFLESLPRMLIIGLVTLFFSIASMMVAFGATVHISLHHKWNLVFIPIALVGLVPVTLFAFLQFPLLVDMCSSTYCRGIFIESSWRELNSRKIDAKGKYKKKSYQS
Disordered region (IsUnstruct)
****FEIKLNILASSIFVKGDLTLFWNIQEDDSMSLYGVQEIVYR********************RRHLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTK*******************************YGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDK*GNNILH***************LKMQRELQWFKLAKNLVHP*********************************ETASSCSVVAALIVTVVFAASFTVPGGHDGRGIPNLLHEPSFMIFAISDMLALFSSITSVLMFLGILTSQYAEEEFLESLPRMLIIGLVTLFFSIASMMVAFGATVHISLHHKWNLVFIPIALVGLVPVTLFAFLQFPLLVDMCSSTYCRGIFIESSWREL******************
Disordered Region (DISOPRED)
**********ILASSIFVKGDLTLFWNIQEDDSMSLYGVQEIVY*************************ELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHLTGKSEPSRHVPGAALKMQRELQWFKLAKNLVHPQFREAENKLEQTPTEVF****************ETASSCSVVAALIVTVVFAASFTV**********NLLHEPSFMIFAISDMLALFSSITSVLMFLGILTSQYAEEEFLESLPRMLIIGLVTLFFSIASMMVAFGATVHISLHHKWNLVFIPIALVGLVPVTLFAFLQFPLLVDMCSSTYCRGIF**************************
Disordered Region (DISEMBL)
MEMQFEIKLNILASSIFVKGDLTLFWNIQEDDSMSLYGVQEIVYRNKSKI************EKYRRHLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHLTGKSEPSRHVPGAALKMQRELQWFKLAKNLVHPQFREAENKLEQTPTEVFTKEHKELAKEGEKWMKETASSCSVVAALIVTVVFAASFTVPGGHDGRGIPNLLHEPSFMIFAISDMLALFSSITSVLMFLGILTSQYAEEEFLESLPRMLIIGLVTLFFSIASMMVAFGATVHISLHHKWNLVFIPIALVGLVPVTLFAFLQFPLLVDMCSSTYCRGIFIESSWRELNSRKIDA***********
Disordered Region (DISPRO)
*EMQFEIKLNILASSIFVKGDLTLFWNIQEDDSMSLYGVQEIVYRNK**************HEKYRRHLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHLTGKSEPSRHVPGAALKMQRELQWFKLAKNLVHPQFREAENKLEQTPTEVFTKEHKELAKEGEKWMKETASSCSVVAALIVTVVFAASFTVPGGHDGRGIPNLLHEPSFMIFAISDMLALFSSITSVLMFLGILTSQYAEEEFLESLPRMLIIGLVTLFFSIASMMVAFGATVHISLHHKWNLVFIPIALVGLVPVTLFAFLQFPLLVDMCSSTYCRGIFIESS**********************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEMQFEIKLNILASSIFVKGDLTLFWNIQEDDSMSLYGVQEIVYRNKSKIEGGQSSRDPQEHEKYRRHLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHLTGKSEPSRHVPGAALKMQRELQWFKLAKNLVHPQFREAENKLEQTPTEVFTKEHKELAKEGEKWMKETASSCSVVAALIVTVVFAASFTVPGGHDGRGIPNLLHEPSFMIFAISDMLALFSSITSVLMFLGILTSQYAEEEFLESLPRMLIIGLVTLFFSIASMMVAFGATVHISLHHKWNLVFIPIALVGLVPVTLFAFLQFPLLVDMCSSTYCRGIFIESSWRELNSRKIDAKGKYKKKSYQS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	691	2.2.26 [Sep-21-2011]
Q9C7A2	590	Ankyrin repeat-containing	no	no	0.198	0.232	0.319	1e-08

>sp|Q9C7A2|Y3236_ARATH Ankyrin repeat-containing protein At3g12360 OS=Arabidopsis thaliana GN=At3g12360 PE=2 SV=1

 Score = 62.4 bits (150), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 76/144 (52%), Gaps = 7/144 (4%)

Query: 474 KNLVHPQFREAENKLEQTPTEVFTKEHKELAKEGEKWMKETASSCSVVAALIVTVVFAAS 533
           KN VH Q  +   K         +KE ++L +EG   +    +S +VVA L  TV FAA 
Sbjct: 383 KNDVHIQLEQ--TKRTNKNVHNISKELRKLHREG---INNATNSVTVVAVLFATVAFAAI 437

Query: 534 FTVPGGHDGRGIPNLLHEPSFMIFAISDMLALFSSITSVLMFLGILTSQY-AEEEFLESL 592
           FTVPGG +  G   ++   SF IF I + LALF+S+  V++ + ++  +  AE+  +E +
Sbjct: 438 FTVPGGDNNDGSAVVVGRASFKIFFIFNALALFTSLAVVVVQITLVRGETKAEKRVVEVI 497

Query: 593 PRML-IIGLVTLFFSIASMMVAFG 615
            +++ +  + T    +AS  +  G
Sbjct: 498 NKLMWLASMCTSVAFLASSYIVVG 521

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	691
255544802	590	ankyrin repeat-containing protein, putat	0.839	0.983	0.409	1e-116
255552378	580	ankyrin repeat-containing protein, putat	0.821	0.979	0.394	1e-104
147784800	1697	hypothetical protein VITISV_029434 [Viti	0.798	0.325	0.387	1e-100
224136692	743	predicted protein [Populus trichocarpa]	0.764	0.710	0.382	1e-100
359483665	762	PREDICTED: ankyrin repeat-containing pro	0.691	0.627	0.402	6e-97
296087932	655	unnamed protein product [Vitis vinifera]	0.842	0.888	0.383	6e-96
225449665	810	PREDICTED: uncharacterized protein LOC10	0.821	0.701	0.380	4e-95
359472754	789	PREDICTED: ankyrin repeat-containing pro	0.740	0.648	0.377	8e-94
356532648	739	PREDICTED: uncharacterized protein LOC10	0.761	0.711	0.370	8e-92
296088578	718	unnamed protein product [Vitis vinifera]	0.903	0.869	0.350	2e-89

>gi|255544802|ref|XP_002513462.1| ankyrin repeat-containing protein, putative [Ricinus communis] gi|223547370|gb|EEF48865.1| ankyrin repeat-containing protein, putative [Ricinus communis]

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 251/613 (40%), Positives = 356/613 (58%), Gaps = 33/613 (5%)

Query: 61  EHEKYRRHLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETD 120
           EH    RHL LY+      W +       +   L         ++ F  I  L V + T 
Sbjct: 2   EHGNGSRHLALYKAAVHGQWITAKRIFDEDPSALTA------KISGFEEI-ALYVAI-TA 53

Query: 121 DEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQT 180
             + + +  +      D+  T++ +DG  N  L   A+ GNL+A+KILVK    L   + 
Sbjct: 54  GHSIEFVQNIVNLMSEDLIGTVN-RDG--NNALHAAAMVGNLEAAKILVKKNPTLTQGRN 110

Query: 181 NQNSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLK 240
             N+ P+H AA + H++T  +LL  T     + +   DG RLL+ LI A+ Y +AL+LLK
Sbjct: 111 VLNATPLHYAASYAHQETVRFLLPVTRDEYPSPFTDKDGVRLLNSLITADFYGLALHLLK 170

Query: 241 NHPEIVHDIDSQKM-ALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVA 299
            +P +    D     +LD LA KP AF SGSRLG    F+Y         ++T       
Sbjct: 171 RYPALARGTDQYGFTSLDMLARKPQAFPSGSRLGFRHSFLYHYCAANSVDTETFHQ---G 227

Query: 300 GDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENV 359
           GD EN +G +  + +K               ++   + I    L H + VE++R +    
Sbjct: 228 GDVENQVGGSEKYCQK---------------RFSFLRDIDKTLLMHKQAVELLRNLISEA 272

Query: 360 IWTNRANRNKLKGA-LFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREK 418
           +  N +  + L G+   TAT+ GI EFV E I +Y YS    +     IF LA+ HR+EK
Sbjct: 273 LKANESQLHSLLGSSTQTATKFGIQEFVAEAIKSYPYSVWFRDGDGCTIFHLAIKHRQEK 332

Query: 419 VFNLIHGV-NSSYFSISLEDKSGNNILHLTGKSEPSRHVPGAALKMQRELQWFKLAKNLV 477
           +FNL++ + N  +   SL D  GN +LHL G  +PS  + GAAL+MQRELQWFK  + ++
Sbjct: 333 IFNLLYQIGNHKHIITSLADSLGNTMLHLAGTLQPSSKISGAALQMQRELQWFKEVEKVI 392

Query: 478 HPQFREAENKLEQTPTEVFTKEHKELAKEGEKWMKETASSCSVVAALIVTVVFAASFTVP 537
            P ++E ++K  +TP +VFT+ HK L ++GEKWMK+TA+SC+ VAAL++TVVFAA+FTVP
Sbjct: 393 QPSYKELKDKNGRTPRQVFTEGHKSLVEQGEKWMKDTATSCATVAALVITVVFAAAFTVP 452

Query: 538 GGHDG-RGIPNLLHEPSFMIFAISDMLALFSSITSVLMFLGILTSQYAEEEFLESLPRML 596
           GG++  +GIP  L+E +F+IFAISD L LFSS TS+LMFLGILTS+Y+E +FL++LP  L
Sbjct: 453 GGNNSDQGIPIYLNETAFVIFAISDALGLFSSSTSLLMFLGILTSRYSEGDFLKALPMRL 512

Query: 597 IIGLVTLFFSIASMMVAFGATVHISLHHKWNLVFIPIALVGLVPVTLFAFLQFPLLVDMC 656
            IGL+TLFFSIASM+ AF A  H+ L H+   + +PI LV   PVTLFA LQFPLL +M 
Sbjct: 513 SIGLITLFFSIASMLAAFSAAFHLVLFHRVKWIAVPIGLVACAPVTLFALLQFPLLSEMI 572

Query: 657 SSTYCRGIFIESS 669
           SST+ R +F + S
Sbjct: 573 SSTFGRSVFRKHS 585

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255552378|ref|XP_002517233.1| ankyrin repeat-containing protein, putative [Ricinus communis] gi|223543604|gb|EEF45133.1| ankyrin repeat-containing protein, putative [Ricinus communis]

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 242/614 (39%), Positives = 351/614 (57%), Gaps = 46/614 (7%)

Query: 67  RHLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDL 126
           ++L L++ +   DW++   F++ + D L   +      T  H+ + L   VE  +E   L
Sbjct: 2   QNLALHKAVDSGDWEAAKKFLEDHPDALTA-SLSADGDTALHVAV-LAGHVEIVEELLTL 59

Query: 127 IDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSL- 185
           +D          +E L  K+    T L+  AI G  + ++ LV  +  LL    NQN L 
Sbjct: 60  LD----------AEDLEMKNKNNATALNYAAIGGITRIAEGLVNSRKNLL-SIPNQNGLI 108

Query: 186 PVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEI 245
           PV +A+L+GHKD   YL +E+P    +   G +G  LL+  I  +LYD+AL+LL+N+PE+
Sbjct: 109 PVVVASLYGHKDMARYLYKESPKGELSPEKGKNGIMLLTTCIVDDLYDIALDLLQNYPEL 168

Query: 246 VHDIDSQK-MALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTEN 304
            +  DS K  AL+ LA KP AF SGS L           P+ + +      P+  GD E+
Sbjct: 169 AYHQDSDKDTALEMLAQKPSAFPSGSTL-----------PLWQSIRVPESQPSSNGDIES 217

Query: 305 GIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNR 364
                        P            + P  + +Y  KLTH++  E++  +C+ +   ++
Sbjct: 218 -------------PRSGRLIRRNIIRRVPGLEYLYNLKLTHVQAHELLCCLCQEISTLHK 264

Query: 365 ANRNKLK--GALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNL 422
           +    +    A+F A + G  EFV E    Y       +  N GIF  AVL R+EKVFNL
Sbjct: 265 SEFENIGVYRAIFKAVKHGTVEFVEEMTKHYPDIIWCEDECNRGIFMYAVLQRQEKVFNL 324

Query: 423 IHGVNSSYFSISLE-DKSGNNILHLTGKSEPSRH---VPGAALKMQRELQWFKLAKNLVH 478
           I+ + +   SI+   DK  NNILH      PS     V GAAL+MQRELQW+K  +++V 
Sbjct: 325 IYKMGAKKNSIATSWDKYFNNILHQAASPPPSSQLDRVSGAALQMQRELQWYKEVESIVQ 384

Query: 479 PQFREAENKLEQTPTEVFTKEHKELAKEGEKWMKETASSCSVVAALIVTVVFAASFTVPG 538
           P+++E  N   +TP  +FT+ HK+L +EGEKWMK+TA+S +VVAALI T++F+A FTVPG
Sbjct: 385 PKYKEMVNFQRKTPRALFTESHKKLVEEGEKWMKDTATSSTVVAALIATIMFSAIFTVPG 444

Query: 539 GHDGRGIPNLLHEPSFMIFAISDMLALFSSITSVLMFLGILTSQYAEEEFLESLPRMLII 598
           G+D  G P  L+E  FM+F ++D ++LF+S +S+LMFLGILT++Y EE+FL+SLP  LI+
Sbjct: 445 GYDQYGKPLYLYEGVFMVFMVADAMSLFASTSSILMFLGILTARYREEDFLKSLPTKLIV 504

Query: 599 GLVTLFFSIASMMVAFGATVHISLHHKWNLVFIPIALVGLVPVTLFAFLQFPLLVDMCSS 658
           GL TLFFSIA+MM+ FG  +   L  + + V  PI L+  +PVTLFA LQFPLLV++  S
Sbjct: 505 GLSTLFFSIATMMITFGVALFTFLRERVSWVLFPIILLASLPVTLFALLQFPLLVEIFFS 564

Query: 659 TYCRGIFIES-SWR 671
           TY  GIF +S  WR
Sbjct: 565 TYGLGIFEKSRKWR 578

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147784800|emb|CAN68568.1| hypothetical protein VITISV_029434 [Vitis vinifera]

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 235/607 (38%), Positives = 338/607 (55%), Gaps = 55/607 (9%)

Query: 79  DWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDI 138
           DW+S   F++SN   ++      RS T  H+  G           T  +++L +    D 
Sbjct: 186 DWKSAKAFLESNPQAVRAR-ITRRSETALHIAAGA--------RHTRFVEELVKLMKPD- 235

Query: 139 SETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDT 198
              L+ ++  GNT L   A  G  + ++++V    EL + + ++   P+++AAL GHKD 
Sbjct: 236 --DLALQNKVGNTALCFAAASGITRIAEVMVNKNRELPMIRGSKGVTPLYMAALVGHKDM 293

Query: 199 FEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQ-KMALD 257
             YL   T    E+     D   LL   I ANL+DVAL++L   PE+    D     AL 
Sbjct: 294 VRYLYSVTE---EDNLTKEDRIGLLVAAITANLFDVALHMLHEDPELAMARDGNGDTALH 350

Query: 258 SLALKPYAFESGSR--------LGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTT 309
            LA KP AF SG              +G +  C+ V + L   + +     +++   G  
Sbjct: 351 VLARKPLAFYSGRARQRGVFLLYSATKGEVRLCLNVIRSLCSASTHVFYXFNSQTYFGL- 409

Query: 310 NGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANR-- 367
                  +P+             P FK++Y +KL H++ +E+V+ + + ++  +   +  
Sbjct: 410 -------LPHAV-----------PGFKSVYDKKLMHIQALELVQQLWDKILSLDHDPKIG 451

Query: 368 ---NKLKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIH 424
                    LFTA  LGI EF+   I +Y      +N Q+  IF +AV HR+EK+FNLI+
Sbjct: 452 ELIRTPSRLLFTAAELGIVEFITVLIRSYPDLIWKVNDQSQTIFHVAVAHRQEKIFNLIY 511

Query: 425 --GVNSSYFSISLEDKSGNNILHLTGKSEPSRHV---PGAALKMQRELQWFKLAKNLVHP 479
             G +  Y + + +D+  NN+LHL GK  PS  +    GAA ++QREL WFK  + ++ P
Sbjct: 512 EIGAHKDYIA-AYKDEKNNNMLHLAGKLAPSNRLKIDSGAAFQLQRELHWFKEVEKIIQP 570

Query: 480 QFREAENKLEQTPTEVFTKEHKELAKEGEKWMKETASSCSVVAALIVTVVFAASFTVPGG 539
            + E +N+  +TP  +FT+EHK+L +EGEKWMK+TASSC VVA LI TV+FAA+F+VPGG
Sbjct: 571 SYTEMKNEQGRTPQILFTEEHKDLVREGEKWMKDTASSCMVVATLIATVMFAAAFSVPGG 630

Query: 540 HDG-RGIPNLLHEPSFMIFAISDMLALFSSITSVLMFLGILTSQYAEEEFLESLPRMLII 598
           +D   G P  L + SF++FAISD LALFSS TS+L+FL ILTS+YAEE+FLESLP  LII
Sbjct: 631 NDDDTGRPIFLTKKSFLVFAISDALALFSSATSILIFLSILTSRYAEEDFLESLPNRLII 690

Query: 599 GLVTLFFSIASMMVAFGATVHISLHHKWNLVFIPIALVGLVPVTLFAFLQFPLLVDMCSS 658
           GL TLF S+A+MM+AF AT+ I L  +   V  P+ALV  VPVTLF  L+FPL +DM S 
Sbjct: 691 GLATLFISVATMMIAFCATLFIVLGPELVWVANPMALVACVPVTLFPLLKFPLFIDMISH 750

Query: 659 TYCRGIF 665
            Y   I 
Sbjct: 751 RYRSSII 757

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224136692|ref|XP_002322392.1| predicted protein [Populus trichocarpa] gi|222869388|gb|EEF06519.1| predicted protein [Populus trichocarpa]

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 235/615 (38%), Positives = 331/615 (53%), Gaps = 87/615 (14%)

Query: 71  LYRMIQMNDWQSVDGFVQS-----NTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATD 125
           LY+     DW+  D F +S     N  I KE +      T+ H+  G         + T 
Sbjct: 195 LYQAAMKGDWEKADEFFKSHPGAINVRITKEMD------TVLHIAAG--------AKHTK 240

Query: 126 LIDKLAQS-TDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNS 184
            ++++ +S T  D    L+ ++   NT L   A  G  K ++++V     L + + N+  
Sbjct: 241 FVEEVVKSMTGTD----LTLRNKYNNTALCYAAASGVTKIAEMMVSKNRNLPMMRNNRGV 296

Query: 185 LPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPE 244
            P+++AALFGHKD   YL   T    + +    D   LL   I  +L+DVAL+++++ PE
Sbjct: 297 TPLYIAALFGHKDMVWYLYSVTS---DEYLTRDDYIGLLIATISTDLFDVALSIIQHQPE 353

Query: 245 IVHDID-SQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTE 303
           +    D + + AL  LA K  AF S S LG    FIY                       
Sbjct: 354 LAIQRDLNGETALHVLARKSSAFASKSGLGFWHRFIYP---------------------- 391

Query: 304 NGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTN 363
                                       +P  KA+Y +KL H + +E+V+   E V+  +
Sbjct: 392 ----------------------------FPGIKAVYDKKLMHTQVLELVKLSWEQVLLLD 423

Query: 364 RANRNKLKGA----LFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKV 419
                +L  +    LF A   GI EF+   I +Y      +N Q+  IF +AV HR+EK+
Sbjct: 424 DCQIAELLASPSQPLFVAAEFGIVEFITALIRSYPDLIWKVNEQSRSIFHIAVAHRQEKI 483

Query: 420 FNLIHGVNSSYFSIS-LEDKSGNNILHLTGKSEPSRH---VPGAALKMQRELQWFKLAKN 475
           F+LI+ + +    I+  +D +  NILHL G   P      + GAAL+MQREL WFK  + 
Sbjct: 484 FSLINDIGAHKDMITAYKDINNANILHLAGMIAPRDKLNVISGAALQMQRELLWFKEVEK 543

Query: 476 LVHPQFREAENKLEQTPTEVFTKEHKELAKEGEKWMKETASSCSVVAALIVTVVFAASFT 535
            V P  +E  +K  +TP  +FT+EH+ L KEGEKWMK TASSC ++A LI TV+FAA FT
Sbjct: 544 NVQPSLKEMRDKNGRTPRMLFTEEHRGLVKEGEKWMKNTASSCMLLATLITTVMFAAIFT 603

Query: 536 VPGGHD-GRGIPNLLHEPSFMIFAISDMLALFSSITSVLMFLGILTSQYAEEEFLESLPR 594
           VPGG+D  +G P +L   SF++FA++D  ALFSS+TS+LMFL ILTS+YAEE+F+ESLP+
Sbjct: 604 VPGGNDNSKGTPLVLASTSFIVFAVADAFALFSSVTSILMFLSILTSRYAEEDFVESLPK 663

Query: 595 MLIIGLVTLFFSIASMMVAFGATVHISLHHKWNLVFIPIALVGLVPVTLFAFLQFPLLVD 654
            L++GL TLF SIA+M+VAF AT  I L H+   + +PI+L   VPVTLFAFLQFPL VD
Sbjct: 664 RLVVGLATLFCSIAAMLVAFAATFCIVLDHRLAWIVVPISLGSSVPVTLFAFLQFPLFVD 723

Query: 655 MCSSTYCRGIFIESS 669
           M  S+Y  GIF   S
Sbjct: 724 MIHSSYGAGIFARKS 738

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483665|ref|XP_003632996.1| PREDICTED: ankyrin repeat-containing protein At3g12360-like [Vitis vinifera]

 Score =  361 bits (927), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 218/541 (40%), Positives = 304/541 (56%), Gaps = 63/541 (11%)

Query: 142 LSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEY 201
           L+ ++  GNT L   A+ G  K ++++V   + L + + ++ + P+H+A L GH++   Y
Sbjct: 267 LALRNKVGNTALCFAAVSGVTKIAEVMVNKNNRLPLIRGSEGATPLHMATLLGHREMVWY 326

Query: 202 LLEETPGRV---ENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQ-KMALD 257
           L  +T        N     D   LL   I ++L+DVAL +++ HP+I        + AL 
Sbjct: 327 LYNKTDSNRLTDSNRLTDEDHHGLLIAAITSDLFDVALKIVQKHPKIATARGRNGETALH 386

Query: 258 SLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSI 317
            LA KP A++SGS+LG L+  IY                                     
Sbjct: 387 ILARKPSAYQSGSQLGFLQRCIYA------------------------------------ 410

Query: 318 PYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKL----KGA 373
                         +P  K +Y +KL H++ +E+V+ +   V+  N     +L       
Sbjct: 411 --------------FPFIKVVYDQKLMHIQALELVKCLWSEVLLMNELQVGELIRTPSRL 456

Query: 374 LFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSI 433
           LFTA  LGI EF+ E I AY      +++Q+  IF +AV+HR+EKVFNLIH + +    I
Sbjct: 457 LFTAAELGIVEFLIELIHAYPDLIWKVDTQSRSIFHIAVVHRQEKVFNLIHEIGALKDLI 516

Query: 434 -SLEDKSGNNILHLTGKSEPSRHV---PGAALKMQRELQWFKLAKNLVHPQFREAENKLE 489
            S  D++ NN+LHL GK  PS  +    GAAL+++REL WFK  + +V P +RE  N   
Sbjct: 517 ASYRDENNNNMLHLAGKLAPSDRLKTDSGAALQLRRELHWFKEVEKIVQPLYREIRNSEG 576

Query: 490 QTPTEVFTKEHKELAKEGEKWMKETASSCSVVAALIVTVVFAASFTVPGGHDGR-GIPNL 548
           +TP  +F +EHK L +EGEKWMK+TA+SC +VA LI TV+FAA FTVPGG +G  GIP  
Sbjct: 577 KTPQTLFMEEHKVLVREGEKWMKDTAASCMLVATLIATVMFAAFFTVPGGDNGNTGIPIF 636

Query: 549 LHEPSFMIFAISDMLALFSSITSVLMFLGILTSQYAEEEFLESLPRMLIIGLVTLFFSIA 608
           L   SF +FA+SD L+  SS  S+LMFL ILTS+YAEE+FL SLP  L IGL TLF S+A
Sbjct: 637 LKRRSFTVFAVSDALSFVSSAASILMFLSILTSRYAEEDFLHSLPNRLTIGLGTLFISVA 696

Query: 609 SMMVAFGATVHISLHHKWNLVFIPIALVGLVPVTLFAFLQFPLLVDMCSSTYCRGIFIES 668
           +MM+AF AT+ + L H  +   IPIALV  +PV+LFA LQFPL  DM S TY   +F   
Sbjct: 697 TMMIAFCATLFLVLGHGLHQAKIPIALVACIPVSLFALLQFPLFADMVSCTYGSRMFFGP 756

Query: 669 S 669
           S
Sbjct: 757 S 757

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296087932|emb|CBI35215.3| unnamed protein product [Vitis vinifera]

 Score =  358 bits (919), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 236/615 (38%), Positives = 345/615 (56%), Gaps = 33/615 (5%)

Query: 65  YRRHLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEAT 124
           + ++  L + +   +W +++  ++SN D+++        LT  H I  L   V   ++  
Sbjct: 52  FSQYAGLIKALDGGNWNAIEDSLRSNPDLVRA-KITPTGLTPLH-IAALAGHVRVVEK-- 107

Query: 125 DLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNS 184
            L+DKL +  D+   E L      G T L+L A  G  + ++ ++     L         
Sbjct: 108 -LVDKL-KPEDLGQKEDLL-----GYTPLALAASDGITEIAQCMLTKNRTLAGISDGDEM 160

Query: 185 LPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPE 244
           LPV +A   G K+   +L   TP        G +G  LLS+ I + + DVAL++LK HP 
Sbjct: 161 LPVVIACNRGKKEMTRFLYSHTPQEKLAPGQGKNGASLLSNCIASQILDVALDILKKHPR 220

Query: 245 IVHDIDSQKM-ALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTE 303
           +   +D +++  +  L   P  F+SGS+L   + +IY CIPV    +      NVA DT+
Sbjct: 221 LAISLDMERIIPIFVLGQMPSLFKSGSQLWFWQRWIYSCIPVKVDHASDQIQVNVADDTQ 280

Query: 304 NGIGTTNGHSK--KSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIW 361
           +     N  +K  + + YG      +Y  +    K IYA+KL H +  E+++ IC  +  
Sbjct: 281 HSRDVKNNTAKVLRHL-YGPV----SYLLQLLGIKNIYAKKLRHAQATELLQCICNEIQK 335

Query: 362 TNRANRN--KLKGALFTATRLGIPEFVNEFIMAYNYSALLLNS---QNHGIFELAVLHRR 416
            N       +L   +  A + G  +F  E I    Y+  L+      +  IF +A+L+R+
Sbjct: 336 VNVEGTLGLRLHHTVIQAVKQGNVDFATEMI---KYTPQLVQKTDINDRNIFFIAILNRQ 392

Query: 417 EKVFNLIHGVNS--SYFSISLEDKSGNNILHLTGKSEPSRH---VPGAALKMQRELQWFK 471
           EK+F+L+HG+N+       S  D+ GNN+LHL     P+     + GAAL+MQRELQWFK
Sbjct: 393 EKIFSLLHGLNNVKKMKMTSNVDRFGNNMLHLAAMLAPANQLDGISGAALQMQRELQWFK 452

Query: 472 LAKNLVHPQFREAENKLEQTPTEVFTKEHKELAKEGEKWMKETASSCSVVAALIVTVVFA 531
             +++V P  ++  N   + P+E+FT++H  L KEGEKWMK+ A+S S VAALIVT++FA
Sbjct: 453 EVESIVPPICKDLVNADGKRPSELFTEQHANLVKEGEKWMKDIAASSSFVAALIVTIMFA 512

Query: 532 ASFTVPGGHDGRGIPNLLHEPSFMIFAISDMLALFSSITSVLMFLGILTSQYAEEEFLES 591
           A+FT+PGG+D  G P  L    FM+F ISD ++LFS+ TSVLMFLGILTSQYAE +FL  
Sbjct: 513 AAFTIPGGNDDTGAPIFLGNDLFMVFIISDSISLFSATTSVLMFLGILTSQYAENKFLTR 572

Query: 592 LPRMLIIGLVTLFFSIASMMVAFGATVHISLHHK-WNLVFIPIALVGLVPVTLFAFLQFP 650
           LP  LIIGL TLFFSIA+MM+AF A + I L  +   +V IPI L+  VPVTLF  LQFP
Sbjct: 573 LPTKLIIGLSTLFFSIATMMIAFCAALAILLKGRSTKVVIIPIILLACVPVTLFVLLQFP 632

Query: 651 LLVDMCSSTYCRGIF 665
           LLV++  STY  GIF
Sbjct: 633 LLVEIFISTYGPGIF 647

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449665|ref|XP_002263931.1| PREDICTED: uncharacterized protein LOC100245348 [Vitis vinifera]

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 233/613 (38%), Positives = 338/613 (55%), Gaps = 45/613 (7%)

Query: 65  YRRHLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEAT 124
           + ++  L + +   +W +++  ++SN D+++        LT  H I  L   V   ++  
Sbjct: 223 FSQYAGLIKALDGGNWNAIEDSLRSNPDLVRA-KITPTGLTPLH-IAALAGHVRVVEK-- 278

Query: 125 DLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNS 184
            L+DKL +  D+   E L      G T L+L A  G  + ++ ++     L         
Sbjct: 279 -LVDKL-KPEDLGQKEDLL-----GYTPLALAASDGITEIAQCMLTKNRTLAGISDGDEM 331

Query: 185 LPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPE 244
           LPV +A   G K+   +L   TP        G +G  LLS+ I + + DVAL++LK HP 
Sbjct: 332 LPVVIACNRGKKEMTRFLYSHTPQEKLAPGQGKNGASLLSNCIASQILDVALDILKKHPR 391

Query: 245 IVHDIDSQKM-ALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTE 303
           +   +D +++  +  L   P  F+SGS+L   + +IY CIPV    +      NVA DT+
Sbjct: 392 LAISLDMERIIPIFVLGQMPSLFKSGSQLWFWQRWIYSCIPVKVDHASDQIQVNVADDTQ 451

Query: 304 NGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTN 363
           +     N  +K                     K IYA+KL H +  E+++ IC  +   N
Sbjct: 452 HSRDVKNNTAKG-------------------IKNIYAKKLRHAQATELLQCICNEIQKVN 492

Query: 364 RANRN--KLKGALFTATRLGIPEFVNEFIMAYNYSALLLNS---QNHGIFELAVLHRREK 418
                  +L   +  A + G  +F  E I    Y+  L+      +  IF +A+L+R+EK
Sbjct: 493 VEGTLGLRLHHTVIQAVKQGNVDFATEMI---KYTPQLVQKTDINDRNIFFIAILNRQEK 549

Query: 419 VFNLIHGVNS--SYFSISLEDKSGNNILHLTGKSEPSRH---VPGAALKMQRELQWFKLA 473
           +F+L+HG+N+       S  D+ GNN+LHL     P+     + GAAL+MQRELQWFK  
Sbjct: 550 IFSLLHGLNNVKKMKMTSNVDRFGNNMLHLAAMLAPANQLDGISGAALQMQRELQWFKEV 609

Query: 474 KNLVHPQFREAENKLEQTPTEVFTKEHKELAKEGEKWMKETASSCSVVAALIVTVVFAAS 533
           +++V P  ++  N   + P+E+FT++H  L KEGEKWMK+ A+S S VAALIVT++FAA+
Sbjct: 610 ESIVPPICKDLVNADGKRPSELFTEQHANLVKEGEKWMKDIAASSSFVAALIVTIMFAAA 669

Query: 534 FTVPGGHDGRGIPNLLHEPSFMIFAISDMLALFSSITSVLMFLGILTSQYAEEEFLESLP 593
           FT+PGG+D  G P  L    FM+F ISD ++LFS+ TSVLMFLGILTSQYAE +FL  LP
Sbjct: 670 FTIPGGNDDTGAPIFLGNDLFMVFIISDSISLFSATTSVLMFLGILTSQYAENKFLTRLP 729

Query: 594 RMLIIGLVTLFFSIASMMVAFGATVHISLHHK-WNLVFIPIALVGLVPVTLFAFLQFPLL 652
             LIIGL TLFFSIA+MM+AF A + I L  +   +V IPI L+  VPVTLF  LQFPLL
Sbjct: 730 TKLIIGLSTLFFSIATMMIAFCAALAILLKGRSTKVVIIPIILLACVPVTLFVLLQFPLL 789

Query: 653 VDMCSSTYCRGIF 665
           V++  STY  GIF
Sbjct: 790 VEIFISTYGPGIF 802

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359472754|ref|XP_002276402.2| PREDICTED: ankyrin repeat-containing protein At3g12360-like [Vitis vinifera]

 Score =  351 bits (900), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 226/598 (37%), Positives = 325/598 (54%), Gaps = 86/598 (14%)

Query: 79  DWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDI 138
           DW+S   F++SN   ++      RS T  H+  G           T  +++L +    D 
Sbjct: 186 DWKSAKAFLESNPQAVRAR-ITRRSETALHIAAGA--------RHTRFVEELVKLMKPD- 235

Query: 139 SETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDT 198
              L+ ++  GNT L   A  G  + ++++V    EL + + ++   P+++AAL GHKD 
Sbjct: 236 --DLALQNKVGNTALCFAAASGITRIAEVMVNKNRELPMIRGSKGVTPLYMAALVGHKDM 293

Query: 199 FEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDS 258
             YL   T    E+     D   LL   I ANL+DVAL++L       H+     MA D 
Sbjct: 294 VRYLYSVTE---EDNLTKEDRIGLLVAAITANLFDVALHML-------HEDPELAMARD- 342

Query: 259 LALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGH--SKKS 316
                                                         G G T  H  ++K 
Sbjct: 343 ----------------------------------------------GNGDTALHVLARKP 356

Query: 317 IPYGSTQQITTYDA---KWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANR-----N 368
           + + S  Q+  +      +P FK++Y +KL H++ +E+V+ + + ++  +   +      
Sbjct: 357 LAFYSGSQLGIWHRCIYSFPGFKSVYDKKLMHIQALELVQQLWDKILSLDHDPKIGELIR 416

Query: 369 KLKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIH--GV 426
                LFTA  LGI EF+   I +Y      +N Q+  IF +AV HR+EK+FNLI+  G 
Sbjct: 417 TPSRLLFTAAELGIVEFITVLIRSYPDLIWKVNDQSQTIFHVAVAHRQEKIFNLIYEIGA 476

Query: 427 NSSYFSISLEDKSGNNILHLTGKSEPSRHV---PGAALKMQRELQWFKLAKNLVHPQFRE 483
           +  Y + + +D+  NN+LHL GK  PS  +    GAA ++QREL WFK  + ++ P + E
Sbjct: 477 HKDYIA-AYKDEKNNNMLHLAGKLAPSNRLKIDSGAAFQLQRELHWFKEVEKIIQPSYTE 535

Query: 484 AENKLEQTPTEVFTKEHKELAKEGEKWMKETASSCSVVAALIVTVVFAASFTVPGGHDG- 542
            +N+  +TP  +FT+EHK+L +EGEKWMK+TASSC VVA LI TV+FAA+F+VPGG+D  
Sbjct: 536 MKNEQGRTPQILFTEEHKDLVREGEKWMKDTASSCMVVATLIATVMFAAAFSVPGGNDDD 595

Query: 543 RGIPNLLHEPSFMIFAISDMLALFSSITSVLMFLGILTSQYAEEEFLESLPRMLIIGLVT 602
            G P  L + SF++FAISD LALFSS TS+L+FL ILTS+YAEE+FLESLP  LIIGL T
Sbjct: 596 TGRPIFLTKKSFLVFAISDALALFSSATSILIFLSILTSRYAEEDFLESLPNRLIIGLAT 655

Query: 603 LFFSIASMMVAFGATVHISLHHKWNLVFIPIALVGLVPVTLFAFLQFPLLVDMCSSTY 660
           LF S+A+MM+AF AT+ I L  +   V  P+ALV  VPVTLF  L+FPL +DM S  Y
Sbjct: 656 LFISVATMMIAFCATLFIVLGPELVWVANPMALVACVPVTLFPLLKFPLFIDMISHRY 713

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532648|ref|XP_003534883.1| PREDICTED: uncharacterized protein LOC100814269 [Glycine max]

 Score =  344 bits (883), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 228/616 (37%), Positives = 333/616 (54%), Gaps = 90/616 (14%)

Query: 68  HLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSL-TIFHLIMGLLVDVETDDEATDL 126
           +L LYR     DW+  + F+  N     E+  + R   T  H+  G            +L
Sbjct: 194 YLPLYRASLKGDWEKANEFL--NLHPGAENAMISRGWETALHISAG----ARRTKFVEEL 247

Query: 127 IDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLP 186
           + ++ ++TD++I      ++   NT L   A  G  K +K++V     L + + ++   P
Sbjct: 248 VKRM-RTTDLEI------QNKDNNTALCFAAASGVTKIAKLMVDRNRNLPVIRGSEGVTP 300

Query: 187 VHLAALFGHKDTFEYLLEETPGRV---ENFYCGGDGGRLLSDLIKANLYDVALNLLKNHP 243
           +++A L G +D   YL   T   +   E+++       LL   I  +LYD AL++L+  P
Sbjct: 301 LYIATLLGQRDMVWYLYSVTNHEILKTEDYFS------LLIAAISTDLYDFALHVLECQP 354

Query: 244 EIV--HDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGD 301
           ++   H ++ +  AL  LA KP +F SG +LG  E  IY                     
Sbjct: 355 QLATYHGLNGET-ALHVLAKKPSSFTSGIQLGIWERCIYPL------------------- 394

Query: 302 TENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIW 361
                                          P F+A+  +K  + + +++V+ + E ++ 
Sbjct: 395 -------------------------------PGFEAVQKKKTLNAQALKLVQRLWELIVS 423

Query: 362 TNRAN-----RNKLKGALFTATRLGIPEFVNEFIMAYNYSALL--LNSQNHGIFELAVLH 414
           ++        ++ L   LF A   GIPE V E +  Y+Y  LL  ++ QN  +F +A++H
Sbjct: 424 SDEIQHGDLIKSPLSRPLFIAAESGIPEIVIELL--YSYPDLLWKVDGQNRSLFHIAIMH 481

Query: 415 RREKVFNLIHGVNSSYFSI-SLEDKSGNNILHLTGKSEPSRH---VPGAALKMQRELQWF 470
           R+EK+FNLI+ + +    I S  D + +NILHL GK  PS     V GAAL+MQREL WF
Sbjct: 482 RQEKIFNLIYDIGAHKDLITSYRDNNNHNILHLAGKLAPSEQLHVVSGAALQMQRELLWF 541

Query: 471 KLAKNLVHPQFREAENKLEQTPTEVFTKEHKELAKEGEKWMKETASSCSVVAALIVTVVF 530
           K  + ++ P F+E ++   +TP  +FT+EHKELAKEGEKW+K TASSC +VA LI TV+F
Sbjct: 542 KEVEKIIQPLFKEIKDSQGRTPQMLFTEEHKELAKEGEKWLKNTASSCMLVATLITTVMF 601

Query: 531 AASFTVPGGHDGRGI-PNLLHEPSFMIFAISDMLALFSSITSVLMFLGILTSQYAEEEFL 589
           AA FTVPGG++     P  +H  SF +FA+SD LALFSS+ SVLMFL ILTS+YA+E+FL
Sbjct: 602 AAIFTVPGGNNNNNGYPIFMHTTSFKVFALSDALALFSSVISVLMFLSILTSRYAQEDFL 661

Query: 590 ESLPRMLIIGLVTLFFSIASMMVAFGATVHISLHHKWNLVFIPIALVGLVPVTLFAFLQF 649
            SLPR L +G+ TLFFSI +M++AFGAT  I L H+   + IP  LV  +P  LFA LQF
Sbjct: 662 VSLPRRLSVGIATLFFSIITMLIAFGATFFIVLGHQLAWIVIPTTLVACIPAILFALLQF 721

Query: 650 PLLVDMCSSTYCRGIF 665
           PLLVD  S TY  G+F
Sbjct: 722 PLLVDTISCTYGAGVF 737

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296088578|emb|CBI37569.3| unnamed protein product [Vitis vinifera]

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 230/657 (35%), Positives = 347/657 (52%), Gaps = 33/657 (5%)

Query: 27  NIQEDDSMSLYGVQEIVYRNKSKIEGGQSSRDP--QEHEKYRRHLELYRMIQMNDWQSVD 84
            I+E DS        +  R+       Q  R    Q    +RR+  L++ +   DW +  
Sbjct: 81  TIRETDSAKFAWDHLVELRHHRTQRSPQVERSIHIQGTRNFRRYECLFKAVDDGDWVTTK 140

Query: 85  GFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSC 144
            F+  + D ++  +    + T  H+ +     +         + KL    D+++      
Sbjct: 141 AFLDHDPDAVRA-SISPTNETALHVAI-----LAGHAHIVKELVKLMTPKDLEL------ 188

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
           + G G T L+  AI G  K +K +V+     +        +PV +A+ +  KD   YL  
Sbjct: 189 RSGLGETALTTAAISGVTKMAKAIVEQYPSAVCVGNEHGQIPVIVASFYDQKDMVRYLYS 248

Query: 205 ETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQ-KMALDSLALKP 263
            TP    +   G +G  LL+ L+ AN+YD+AL+LLK++  +    D      +  LA KP
Sbjct: 249 VTPIEELSPEKGTNGATLLNFLVSANIYDIALHLLKHYRHLSFTKDYYGNYTVRMLARKP 308

Query: 264 YAFESGSRLGCLEGFIYKC--IPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGS 321
            AF SGS+L   E +IY C    V   L +      +A    N +   + +     P  S
Sbjct: 309 SAFLSGSKLLFWERWIYSCKYFIVNHHLLEKVYLHYLA----NHLTCPSNYMDTYGPPKS 364

Query: 322 TQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIW--TNRANRNKLKGALFTATR 379
            Q +      +P  K IY  K TH+ + +++  I E + +  +++     +  A++ A +
Sbjct: 365 KQVLV-----FPDLKHIYEAKWTHVGSSQLLDCIFEEIPYLTSSQLEMFGINQAIYDAIK 419

Query: 380 LGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLE-DK 438
            GI EF+   I     S      +   +F  AV+ R+EK+F+L++G+      I+   D 
Sbjct: 420 HGIIEFIVALIKHDPESIWRKGVKGRTMFSHAVVLRQEKIFSLVYGLGIKKNVIARRHDI 479

Query: 439 SGNNILHLTGK-SEPSR--HVPGAALKMQRELQWFKLAKNLVHPQFREAENKLEQTPTEV 495
             NNILHL GK S PS+   V GAAL+MQRELQWFK  +++V  +++E  N+  +TP  V
Sbjct: 480 FHNNILHLAGKLSPPSQLDRVSGAALQMQRELQWFKEVESMVQAKYKEEFNEYHKTPIHV 539

Query: 496 FTKEHKELAKEGEKWMKETASSCSVVAALIVTVVFAASFTVPGG-HDGRGIPNLLHEPSF 554
           F +EH EL K+GE WMK TA+SC VVA LI  ++F  +FT+PGG  +  GIP  +   +F
Sbjct: 540 FIEEHAELVKQGESWMKSTAASCMVVATLIAALMFTTAFTLPGGTKNDTGIPVFIKSKAF 599

Query: 555 MIFAISDMLALFSSITSVLMFLGILTSQYAEEEFLESLPRMLIIGLVTLFFSIASMMVAF 614
           M+F  SD L+LFSS TSVLMFLGILTS+YA E+FL+SLP  LIIGL +LFFSI SMMVAF
Sbjct: 600 MVFIASDALSLFSSSTSVLMFLGILTSRYAAEDFLKSLPIKLIIGLSSLFFSIVSMMVAF 659

Query: 615 GATVHISLHHKWNLVFIPIALVGLVPVTLFAFLQFPLLVDMCSSTYCRGIFIESSWR 671
           G+ + + L  + + +  PI  +  +P+T FA LQFPLLV++ + TY R IF + + R
Sbjct: 660 GSAIFVVLCQELSWISFPIIALACIPITFFALLQFPLLVEIVTCTYGRSIFDKPTKR 716

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	691
TAIR|locus:2175413	669	AT5G04700 "AT5G04700" [Arabido	0.717	0.741	0.374	6.1e-71
TAIR|locus:2180228	625	AT5G04690 "AT5G04690" [Arabido	0.468	0.518	0.423	1.4e-68
TAIR|locus:2175448	603	AT5G04730 "AT5G04730" [Arabido	0.712	0.815	0.367	1.2e-67
TAIR|locus:2080240	574	AT3G54070 "AT3G54070" [Arabido	0.413	0.498	0.383	6.1e-58
TAIR|locus:2165174	347	AT5G35810 "AT5G35810" [Arabido	0.412	0.821	0.41	4.4e-52
TAIR|locus:2128791	683	AT4G03470 [Arabidopsis thalian	0.395	0.399	0.273	9.8e-16
TAIR|locus:2128771	641	AT4G03450 "AT4G03450" [Arabido	0.218	0.235	0.3	4.8e-12
TAIR|locus:2129685	694	AT4G14390 "AT4G14390" [Arabido	0.366	0.364	0.271	7.5e-12
TAIR|locus:2092522	590	ITN1 "INCREASED TOLERANCE TO N	0.198	0.232	0.312	8.1e-12
TAIR|locus:2075009	607	AT3G09550 [Arabidopsis thalian	0.645	0.734	0.224	3.2e-11

TAIR|locus:2175413 AT5G04700 "AT5G04700" [Arabidopsis thaliana (taxid:3702)]

 Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
 Identities = 198/529 (37%), Positives = 290/529 (54%)

Query:   150 NTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLEETPGR 209
             +T L++ A+ GN++ ++ LV    +LL        +PV +A      +   YL   TP +
Sbjct:   153 HTPLTVVAVSGNMEIAEALVAKNPKLLEIPGINGQIPVVVAVENTQMEMARYLYTRTPVQ 212

Query:   210 VENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQ--KMALDSLALKPYAFE 267
             V     G  G  L  + I   + D+AL+L      +     SQ   + +  LA KP  F 
Sbjct:   213 VLLDQDGYHGSLLFLNAIFYKMLDIALDLFNMSRRLAVTKHSQIESIPIIVLASKPDLFP 272

Query:   268 SGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAG-DTENGIGTTNGHSKKSIPYGSTQQIT 326
              G  LG L  FIY  I V  +L  T   P+ +  D +N +       +K +  G +    
Sbjct:   273 GGCYLGPLTRFIYSWIQV--KLP-TLPQPSRSNRDQQNTL------MRKLLK-GLS---- 318

Query:   327 TYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNK-LKGALFTATRLGIPEF 385
                 KW     +Y  K+ H++  +++  I E  +      R++ +  AL  A R G  +F
Sbjct:   319 ----KWTGIDEVYRLKVMHLQAKKLLLGISEETLALGLKERSETVDEALLFAVRYGNVDF 374

Query:   386 VNEFIMAYNYSALLLN---SQNHGIFELAVLHRREKVFNLIHGVNS-SYFSISLEDKSGN 441
             + E I   N S LL +   S +  +F LAV  R+EKVF+L++G++   Y  ++ +D  GN
Sbjct:   375 LVEMIR--NNSELLWSTRTSSSSTLFLLAVEFRQEKVFSLLYGLDDRKYLLLADKDCDGN 432

Query:   442 NILHLTG-KSEPSR--HVPGAALKMQRELQWFKLAKNLVHPQFREAENKLEQTPTEVFTK 498
              +LHL G  S PS+   V GA L++QRELQWFK  + +     +E  N  EQTP E+FTK
Sbjct:   433 GVLHLAGFPSPPSKLSSVVGAPLQLQRELQWFKEVERIAPEIEKERVNTEEQTPIEIFTK 492

Query:   499 EHKELAKEGEKWMKETASSCSVVAALIVTVVFAASFTVPGGHD--GRGIPNLLHEPSFMI 556
             EH+ L +E EKWMK+TA SCS+VAALIVTV FAA FTVPGG D   +G P  L +  F+I
Sbjct:   493 EHQGLRQEAEKWMKDTAMSCSLVAALIVTVTFAAVFTVPGGTDDNSKGKPFHLRDRRFII 552

Query:   557 FAISDMLALFSSITSVLMFLGILTSQYAEEEFLESLPRMLIIGLVTLFFSIASMMVAFGA 616
             F +SD+++ F+S TSVL+FLGILT++Y+ ++FL  LP  +I GL  LF SIA+M++AF +
Sbjct:   553 FIVSDLISCFASCTSVLIFLGILTARYSFDDFLVFLPTKMIAGLSILFVSIAAMLIAFSS 612

Query:   617 TVHISLHHKWNLVFIPIALVGLVPVTLFAFLQFPLLVDMCSSTYCRGIF 665
              +   +  +   +  P  L   +P  LF  LQ+PLL +M  STY +GIF
Sbjct:   613 ALFTMMGKEGKWIVAPTILFACLPALLFVLLQYPLLKEMIFSTYGKGIF 661

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2180228 AT5G04690 "AT5G04690" [Arabidopsis thaliana (taxid:3702)]

 Score = 619 (223.0 bits), Expect = 1.4e-68, Sum P(2) = 1.4e-68
 Identities = 142/335 (42%), Positives = 202/335 (60%)

Query:   338 IYAEKLTHMRTVEIVRFICENVIWTNRANRNK-LKGALFTATRLGIPEFVNEFIMAYNYS 396
             +Y  K+ H++  ++++ I E  +      R++ +  AL  A R G  +F+ E I   N S
Sbjct:   287 VYRLKVMHLQAKKLLKGISEETLALGLKERSESVDEALLFAVRYGNVDFLVEMIK--NNS 344

Query:   397 ALLLNSQNHGIFELAVLHRREKVFNLIHGVNS-SYFSISLEDKSGNNILHLTGKSEPSRH 455
              LL ++    +F  AV  R+EKVF+L++G+    Y  ++ +D  GN++LHL G   P+  
Sbjct:   345 ELLWSTGTSTLFNTAVQVRQEKVFSLLYGLGDRKYLFLADKDSDGNSVLHLAGYPPPNYK 404

Query:   456 ---VPGAALKMQRELQWFKLAKNLVHPQFREAENKLEQTPTEVFTKEHKELAKEGEKWMK 512
                V  A L+MQRELQWFK  + +V     E  N    TP E+F KEH+ +  E EKWMK
Sbjct:   405 LATVVSATLQMQRELQWFKEMERIVPAIENERVNTENLTPIEIFRKEHEAMRLEAEKWMK 464

Query:   513 ETASSCSVVAALIVTVVFAASFTVPGGHDGR--GIPNLLHEPSFMIFAISDMLALFSSIT 570
             +TA SCS+VAALIVTV FAA FTVPGG D    G P   HE  F+IF +SD+++ F++ T
Sbjct:   465 DTAMSCSLVAALIVTVTFAAIFTVPGGTDDNSGGRPFHRHERIFVIFIVSDLISCFAACT 524

Query:   571 SVLMFLGILTSQYAEEEFLESLPRMLIIGLVTLFFSIASMMVAFGATVHISLHHKWNLVF 630
             SVL+FLGILT++YA ++FL SLP  +I GL TLF SIA+M+VAF + +    +  W  + 
Sbjct:   525 SVLIFLGILTARYAFDDFLFSLPANMIAGLSTLFVSIAAMLVAFSSALFTIFNDPW--IV 582

Query:   631 IPIALVGLVPVTLFAFLQFPLLVDMCSSTYCRGIF 665
              P       P  LF  +Q+PLL ++  STY + IF
Sbjct:   583 APTIFFACFPALLFVMIQYPLLKELIFSTYGKRIF 617

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2175448 AT5G04730 "AT5G04730" [Arabidopsis thaliana (taxid:3702)]

 Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
 Identities = 195/531 (36%), Positives = 281/531 (52%)

Query:   153 LSLCAIRGNLKASKILVK-HKHELLIKQTNQN---SLPVHLAALFGHKDTFEYLLEETPG 208
             L + A  GNL   K L + H ++ L +  +     ++PV  A+  GHK   +YL      
Sbjct:    85 LDIAAGNGNLTRVKQLCEPHLNQPLARNNSVRYGLAIPVVRASNAGHKKVTDYLYYNHYK 144

Query:   209 RVENFYCGGDGGR-----LLSDLIKANLYDVALNLLKNHPEI-VHDIDSQKMALDS-LAL 261
             R        D        LL D I     D+AL+++K+ P + V     Q++ +   +A+
Sbjct:   145 RTLPLVLENDNDVYWATCLLLDAIFYGFLDIALDIIKHLPSVAVTKHARQRLPIYKFIAV 204

Query:   262 KPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGS 321
             KP  F S    G     IY CI V++     N  PN     +N +            +G 
Sbjct:   205 KPDLFRSHCNFGFWRHLIYSCIRVSE-----NPRPN----RDNRLFCMTLPQSLLKWFGI 255

Query:   322 TQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVI-WTNRANRNKLKGALFTATRL 380
              Q   TYD K    +   A+KL       +   + +N I W     +  +  AL  A + 
Sbjct:   256 KQ---TYDLKK---RHSQAQKLLKQMCTSLRDIMAKNEIRW-----KETVYEALLEAAKS 304

Query:   381 GIPEFVNEFIMAYNYSALLLN-SQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLE-DK 438
             G  +F  E I   +    +LN +    +F+LAV  ++EK+FNLIHG++    ++    DK
Sbjct:   305 GNRDFFIEIIKCNSQLLWILNPTSGRNLFQLAVEFKKEKIFNLIHGLDDRKVTLLRSYDK 364

Query:   439 SGNNILHLTGK-SEPSR--HVPGAALKMQRELQWFKLAKNLVHPQFREAENKLEQTPTEV 495
               NNILH+ G+ S P +   + GAALKMQRE QWFK  ++LV  +    +NK  +TP ++
Sbjct:   365 GNNNILHIAGRLSTPDQLSKISGAALKMQRESQWFKEVESLVSEREVVQKNKDNKTPRQI 424

Query:   496 FTKEHKELAKEGEKWMKETASSCSVVAALIVTVVFAASFTVPGGHDGR-GIPNLLHEPSF 554
             F   H+ L KEGE+WMK TA++CS VAALI TV F A FTVPGG DG  G P +L++  F
Sbjct:   425 FEHYHEHLRKEGEEWMKYTATACSFVAALIATVTFQAIFTVPGGIDGTSGSPLILNDLHF 484

Query:   555 MIFAISDMLALFSSITSVLMFLGILTSQYAEEEFLESLPRMLIIGLVTLFFSIASMMVAF 614
               F  +D LA F+S  SVL+FL ILTS+Y+ ++F+ SLPR +I+G   LF SIASM+VAF
Sbjct:   485 RAFIFTDTLAFFASCISVLIFLSILTSRYSFDDFIVSLPRKMILGQSILFISIASMLVAF 544

Query:   615 GATVHISLHHKWNLVFIPIALVGLVPVTLFAFLQFPLLVDMCSSTYCRGIF 665
               ++  S+ HK  LV+ P+  +   P  LF  LQ+PLL +M SSTY + +F
Sbjct:   545 ITSLSASMRHKPALVY-PLKPLASFPSLLFLMLQYPLLKEMISSTYGKRLF 594

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2080240 AT3G54070 "AT3G54070" [Arabidopsis thaliana (taxid:3702)]

 Score = 490 (177.5 bits), Expect = 6.1e-58, Sum P(2) = 6.1e-58
 Identities = 115/300 (38%), Positives = 171/300 (57%)

Query:   374 LFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIH---GVNSSY 430
             LF A  LG  E +   I ++     ++++ N  +F +A L+R E +F+LI+   G+    
Sbjct:   259 LFDAAELGNVEILVILIRSHLDLLWIVDNNNRTLFHVAALYRHENIFSLIYELGGIKDLI 318

Query:   431 FSISLEDKSGNNILHLTGKSEPSRHVP---GAALKMQRELQWFKLAKNLVHPQFREAENK 487
              S   E +S + +LHL  +  P        GAAL MQ+EL WFK  K +V   + E +N 
Sbjct:   319 ASYK-EKQSKDTLLHLVARLPPMNRQQVGSGAALHMQKELLWFKAVKEIVPRSYIETKNT 377

Query:   488 LEQTPTEVFTKEHKELAKEGEKWMKETASSCSVVAALIVTVVFAASFTVPGGHDGRG--- 544
               +   ++FT++H+ L KEGE+WMKETA++C + A LI TVVFAA+ T+PGG+D  G   
Sbjct:   378 KGELAHDIFTEQHENLRKEGERWMKETATACMLGATLIATVVFAAAITIPGGNDDSGDKA 437

Query:   545 ----IPNLLHEPSFMIFAISDMLALFSSITSVLMFLGILTSQYAEEEFLESLPRMLIIGL 600
                  PN      F IF +SD +ALFSS+ S+++FL I TS+YAEE+F   LP  L+ GL
Sbjct:   438 NTLGFPNFRKRLLFDIFTLSDSVALFSSMMSIVIFLSIFTSRYAEEDFRYDLPTKLMFGL 497

Query:   601 VTLFFSIASMMVAFGATVHISLHHKWNLVFIPIALVGLVPVTLFAFLQFPLLVDMCSSTY 660
               LF SI SM++AF  ++ +    K +L  + I+ +  +    FA+L F L  +   S Y
Sbjct:   498 SALFISIISMILAFTFSMILIRVEKASLSLVLISCLASLTALTFAYLYFHLWFNTLRSVY 557

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2165174 AT5G35810 "AT5G35810" [Arabidopsis thaliana (taxid:3702)]

 Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
 Identities = 123/300 (41%), Positives = 176/300 (58%)

Query:   374 LFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIH--GVNSSYF 431
             LF A + G  E +   I +Y      ++ +N  +F +A ++R EK+FN I+  G      
Sbjct:    35 LFDAAQSGNLELLLILIRSYPDLIWTVDHKNQSLFHIAAINRHEKIFNRIYELGAIKDLI 94

Query:   432 SISLEDKSGNNILHLTGKSEPSRH---VPGAALKMQRELQWFKLAKNLVHPQFREAENKL 488
             ++  E +S +N+LHL  +  P      V GAAL+MQRE+ W+K  K +V   + + +NK 
Sbjct:    95 AMYKEKESNDNLLHLVARLPPPNRLQVVSGAALQMQREILWYKAVKEIVPRVYIKTKNKK 154

Query:   489 EQTPTEVFTKEHKELAKEGEKWMKETASSCSVVAALIVTVVFAASFTVPGGHDGRG---- 544
             E+   ++FTKEH  L KEGEKWMKETA++C +V+ LI TVVFAA+FT+PGG+D  G    
Sbjct:   155 EEVAHDLFTKEHDNLRKEGEKWMKETATACILVSTLIATVVFAAAFTLPGGNDTSGDIKT 214

Query:   545 --IPNLLHEPSFMIFAISDMLALFSSITSVLMFLGILTSQYAEEEFLESLPRMLIIGLVT 602
                P    E  F +F ISD +AL SS+TS+++FL ILTS+YAE  F  +LP  L++GL+ 
Sbjct:   215 LGFPTFRKEFWFEVFIISDSVALLSSVTSIMIFLSILTSRYAEASFQTTLPTKLMLGLLA 274

Query:   603 LFFSIASMMVAFGATVHI--SLHHKWNLVFIPIALVGLVPVTLFAFLQFPLLVDMCSSTY 660
             LF SI SM++AF AT+ +      KW+L+ +    V       F  L F L  D   S Y
Sbjct:   275 LFVSIISMVLAFTATLILIRDQEPKWSLILL--VYVASATALSFVVLHFQLWFDTLRSAY 332

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2128791 AT4G03470 [Arabidopsis thaliana (taxid:3702)]

 Score = 190 (71.9 bits), Expect = 9.8e-16, Sum P(2) = 9.8e-16
 Identities = 84/307 (27%), Positives = 142/307 (46%)

Query:   377 ATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLE 436
             A   G  + V E      YS LLLN +   +  +A    + ++   +          + +
Sbjct:   345 AVEKGRIKVVKEICKRCPYSKLLLNKKGQNLLHIAAESGKFRILRHLTAHEQINHLANEK 404

Query:   437 DKSGNNILHLTG---KSEPSRHVPGAA-LKMQRE--LQWFKLAKNLVHPQ--FREAENKL 488
             D  GN  LHL     +    R + G   L +Q    L    +A++ + P   FRE    L
Sbjct:   405 DVDGNTPLHLATIYWRPRAVRELGGKKNLLIQNNNGLVALDIAESKLQPHYIFRERLTLL 464

Query:   489 -------EQTPTEVFTK-EHKELAKEGEKWMKETASSCSVVAALIVTVVFAASFTVPGGH 540
                    +  P    T  + + +  +G    K+  ++  VVAALI TV F + FT+PGG 
Sbjct:   465 ALVQLHFQNDPRCAHTMIQTRPIMPQGGN--KDYINALLVVAALITTVTFTSGFTIPGGF 522

Query:   541 -DGR---GIPNLLHEPSFMIFAISDMLALFSSITSVLMFLGILTSQYAEEEFLESLPRML 596
              D     G+ NL+  P  ++F I D+LAL    TS L  + ++ +Q  +    +S  R  
Sbjct:   523 KDSTPNVGMANLITNPRLILFLIFDILALE---TSFLAVVSLILAQLGDPTLYQSSVR-- 577

Query:   597 IIGLVTLFFSIASMMVAFGATVHISLHH-KWNLVFIPIALVGLVPVTLFAFLQF-P-LLV 653
              + +++L+F++  M +AF   + I+  + +W LV++   L+  + +TL AF +F P LL+
Sbjct:   578 -VAMISLYFAMYFMTLAFFFVMVIAAGNVRW-LVYVIFCLIFSI-LTL-AFSRFMPHLLL 633

Query:   654 DMCSSTY 660
               C S+Y
Sbjct:   634 HYCGSSY 640

GO:0005739 "mitochondrion" evidence=ISM

TAIR|locus:2128771 AT4G03450 "AT4G03450" [Arabidopsis thaliana (taxid:3702)]

 Score = 143 (55.4 bits), Expect = 4.8e-12, Sum P(3) = 4.8e-12
 Identities = 51/170 (30%), Positives = 83/170 (48%)

Query:   492 PTEVFTKEHKELAKEGEKWMKETASSCSVVAALIVTVVFAASFTVPGGHDG----RGIPN 547
             PT   T + +     G K+ K++ +   +VA L+ TV FAA   +PGG       RGI  
Sbjct:   438 PTSGITLKSRSEKVAGNKY-KDSINVLLLVATLVATVAFAAGIAIPGGFSSSTPKRGIA- 495

Query:   548 LLHEPSFM-IFAISDMLALFSSITSVLMFLGILTSQYAEEEFLESLPRMLIIGLVTLFFS 606
             +L +  F+ IF + + LA+ SS   VL  + ++ +Q  +   +    +   + L  LF S
Sbjct:   496 ILDDDDFLSIFLVFNTLAMQSS---VLAIVALIWAQLGDPVLVH---KTFHLALPALFVS 549

Query:   607 IASMMVAFGA-TVHISLHHKW---NLVFIPIALVGLVPVTL--FAFLQFP 650
             + SM  AF    V  + H+ W   +++FI I  + +V   L  +A  QFP
Sbjct:   550 LVSMSSAFFCGVVATTKHNPWLFDSIIFISIIFLFVVAYLLAPYAIPQFP 599

GO:0000165 "MAPK cascade" evidence=RCA

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0009581 "detection of external stimulus" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2129685 AT4G14390 "AT4G14390" [Arabidopsis thaliana (taxid:3702)]

 Score = 164 (62.8 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
 Identities = 78/287 (27%), Positives = 125/287 (43%)

Query:   374 LFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFN-LIHGVNSSYFS 432
             + TA   G    V EFI     S  LLN     +  +A  + +  + N LI   ++ +  
Sbjct:   363 IHTAAEKGHENIVEEFIKRCPGSKHLLNKLGQNVLHIAAKNGKFWISNMLIINKDTEHLG 422

Query:   433 ISLEDKSGNNILHLTGKSEPSRHVPGAA-----LKMQRE--LQWFKLAKNLVHPQFREAE 485
             +  +D  GN  LHL   +   + +   A     LK++ +  L+   +A+  V P +   E
Sbjct:   423 VG-QDVDGNTPLHLAVMNWHFKSITWLARSSKILKVRNKNGLRARDIAEREVKPHYIFQE 481

Query:   486 N-----KLEQTPTEVFTKEHKELAKEG----EKWMKETASSCSVVAALIVTVVFAASFTV 536
                    L    +  F   H  L K       K  ++  ++  +VAAL+ T+ FAA FT+
Sbjct:   482 RWTLALLLYAIHSRGFESVHS-LTKPSVPLDPKNNRDYVNTLLLVAALVATMTFAAGFTI 540

Query:   537 PGGHDGR----GIPNLLHEPSFMIFAISDMLALFSSITSVLMFLGILT-SQYAEEEFLES 591
             PGG +      G   L   P+  IF + D+LA+ SS+ ++    GIL  +Q  +   + S
Sbjct:   541 PGGFNSSAPHLGRATLATNPTLFIFLVLDILAMQSSVATI----GILIWAQLGDPVLIRS 596

Query:   592 LPRMLIIGLVTLFFSIASMMVAF--GATVHISLHHKWNLVFIPIALV 636
                 L + L  L F++  M +AF  G    +  H KW +V I I  V
Sbjct:   597 ---SLHVALPLLLFALLCMPLAFLFGVVTAVG-HVKWLVVIICIISV 639

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2092522 ITN1 "INCREASED TOLERANCE TO NACL" [Arabidopsis thaliana (taxid:3702)]

 Score = 159 (61.0 bits), Expect = 8.1e-12, Sum P(3) = 8.1e-12
 Identities = 45/144 (31%), Positives = 77/144 (53%)

Query:   474 KNLVHPQFREAENKLEQTPTEVFTKEHKELAKEGEKWMKETASSCSVVAALIVTVVFAAS 533
             KN VH Q  + +   +       +KE ++L +EG   +    +S +VVA L  TV FAA 
Sbjct:   383 KNDVHIQLEQTKRTNKNVHN--ISKELRKLHREG---INNATNSVTVVAVLFATVAFAAI 437

Query:   534 FTVPGGHDGRGIPNLLHEPSFMIFAISDMLALFSSITSVLMFLGILTSQY-AEEEFLESL 592
             FTVPGG +  G   ++   SF IF I + LALF+S+  V++ + ++  +  AE+  +E +
Sbjct:   438 FTVPGGDNNDGSAVVVGRASFKIFFIFNALALFTSLAVVVVQITLVRGETKAEKRVVEVI 497

Query:   593 PRML-IIGLVTLFFSIASMMVAFG 615
              +++ +  + T    +AS  +  G
Sbjct:   498 NKLMWLASMCTSVAFLASSYIVVG 521

GO:0005886 "plasma membrane" evidence=IDA

GO:0009651 "response to salt stress" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IPI

GO:0034613 "cellular protein localization" evidence=IDA

TAIR|locus:2075009 AT3G09550 [Arabidopsis thaliana (taxid:3702)]

 Score = 189 (71.6 bits), Expect = 3.2e-11, P = 3.2e-11
 Identities = 111/495 (22%), Positives = 216/495 (43%)

Query:   177 IKQTN--QNSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDV 234
             +KQ     N   +HLAA  G   + + +L +   ++     G D    ++ ++ + + +V
Sbjct:    80 VKQVTGRHNDTELHLAAQRGDLASVKQILSDIDSQITGTITGADFDDEVAQIMTSVVNEV 139

Query:   235 ALNLLKNHPEIVH----DIDSQKMAL-----DSLALKPYAFESGSRLGCLEGF--IYKCI 283
               N L   P        +ID  K  L     +SL  K  +      + C +G   I + +
Sbjct:   140 --NELGETPLFTAAEKGNIDVVKELLPYTTIESLMQKNLSGFDALHIACSQGHRSIVQLL 197

Query:   284 ----P-VTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAI 338
                 P ++K ++Q+N  P V+  T       N    K     S  +I+  + K     A+
Sbjct:   198 LEHEPQLSKTVAQSNATPLVSAATRGHSEVVNELLAKD---SSLLEISRSNGK----NAL 250

Query:   339 Y-AEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEFIMAYNYSA 397
             + A +  H   V+IVR + +      R    K + +L  A + G+   V   ++  + + 
Sbjct:   251 HLAARQGH---VDIVRTLLDKDPQLARRTDKKGQTSLHMAVK-GVSSQVVRLLLRADPAI 306

Query:   398 LLLNSQ-NHGIFELAVLHRREKVFN-LIHGVNSSYFSISLEDKSGNNILHLTGKSEPSRH 455
             ++L  +  + +  +A   +R ++ N L+   +++  +++ + K+  +I      SE +  
Sbjct:   307 VMLPDKFGNTVLHIATRKKRAEIVNELLQLPDTNVNALTRDHKTAYDIAEGLTHSEETAE 366

Query:   456 VPG-----AALKMQRELQWFKLAKNLVHPQFREAENKLEQTPTEVFTKEH--KELAKEGE 508
             +        ALK     Q     +  V    ++   +LEQT       +   KEL K   
Sbjct:   367 IKEILSRCGALKANELNQPRDELRKTVTEIKKDVHTQLEQTRKTNKNVDGIAKELRKLHR 426

Query:   509 KWMKETASSCSVVAALIVTVVFAASFTVPGGHDGRGIPNLLHEPSFMIFAISDMLALFSS 568
               +    +S +VVA L  TV FAA FTVPGG D  G+  ++H  SF IF I + +ALF+S
Sbjct:   427 AGINNATNSVTVVAVLFATVAFAAIFTVPGGDDDHGVAVMVHATSFKIFFIFNAIALFTS 486

Query:   569 ITSVLMFLGILTSQY-AEEEFLESLPRMLIIGLVTLFFSIASMMVAFGATVHISLHHKWN 627
             +  V++ + ++  +   E   +E + +++ +       S+ +  VAF ++ +I +  +  
Sbjct:   487 LAVVVVQITLVRGETKTERRVVEVINKLMWLA------SVCTT-VAFISSSYIVVGRRNR 539

Query:   628 LVFIPIALVGLVPVT 642
                + + ++G V +T
Sbjct:   540 YAAVVVTVIGTVTMT 554

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	691
pfam13962	114	pfam13962, PGG, Domain of unknown function	2e-30
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	7e-06
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	8e-06
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	3e-05
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	4e-05
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-04
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	6e-04

>gnl|CDD|222475 pfam13962, PGG, Domain of unknown function

 Score =  114 bits (289), Expect = 2e-30
 Identities = 44/120 (36%), Positives = 63/120 (52%), Gaps = 14/120 (11%)

Query: 508 EKWMKETASSCSVVAALIVTVVFAASFTVPGG-----HDGR-GIPNLLHEPS-FMIFAIS 560
            +W+++T +S  VVA LI TV FAA FT PGG          G P L  +P  F  F +S
Sbjct: 1   SEWLEKTRNSLLVVATLIATVTFAAGFTPPGGYWQDDGGHHAGTPILAGKPRRFKAFFVS 60

Query: 561 DMLALFSSITSVLMFLGILTSQYAEEEFLESLPRMLIIGLVTLFFSIASMMVAFGATVHI 620
           + +A  +S+ +V++ L      Y    F   LPR L+  L  L+ S+ S+MVAF A  + 
Sbjct: 61  NTIAFVASLVAVILLL------YIVPSFSRRLPR-LLALLTLLWLSLLSLMVAFAAGSYR 113

The PGG domain is named for the highly conserved sequence motif found at the startt of the domain. The function is not known. Length = 114

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 44.6 bits (106), Expect = 7e-06
 Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 12/79 (15%)

Query: 126 LIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSL 185
           L++K A   DV++ +T        +T L L A  GNL+  K+L++H  ++  K  + N+ 
Sbjct: 16  LLEKGA---DVNLGDT--------DTALHLAARNGNLEIVKLLLEHGADVNAKDKDGNT- 63

Query: 186 PVHLAALFGHKDTFEYLLE 204
            +HLAA  G+ +  + LLE
Sbjct: 64  ALHLAARNGNLEIVKLLLE 82

Length = 91

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 45.5 bits (108), Expect = 8e-06
 Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
           +D  G T L L A  G+L+  K+L+++  ++  K  +  + P+HLAA  GH +  + LLE
Sbjct: 3   RDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRT-PLHLAAKNGHLEIVKLLLE 61

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 43.9 bits (104), Expect = 3e-05
 Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
           KD  G T L L A  G+L+  K+L++   ++   +    + P+HLAA  G+ D  + LL+
Sbjct: 36  KDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNA-RDKDGNTPLHLAARNGNLDVVKLLLK 94

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 41.5 bits (98), Expect = 4e-05
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)

Query: 149 GNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLL 203
           G T L   AI G L+  K L++   ++     + N+  +H+AA  G+ +  + LL
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNT-ALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 3/52 (5%)

Query: 153 LSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
           L L A  GNL+  K+L++   ++ +  T+     +HLAA  G+ +  + LLE
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTD---TALHLAARNGNLEIVKLLLE 49

Length = 91

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 40.1 bits (94), Expect = 6e-04
 Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLL 203
           +D  GNT L L A  GNL   K+L+KH  ++   +      P+HLAA  GH +  + LL
Sbjct: 69  RDKDGNTPLHLAARNGNLDVVKLLLKHGADVNA-RDKDGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	691
KOG0510	929	consensus Ankyrin repeat protein [General function	100.0
PHA02876	682	ankyrin repeat protein; Provisional	100.0
PHA02874	434	ankyrin repeat protein; Provisional	100.0
PHA02946	446	ankyin-like protein; Provisional	100.0
PHA03095	471	ankyrin-like protein; Provisional	100.0
PHA02946	446	ankyin-like protein; Provisional	100.0
KOG0510	929	consensus Ankyrin repeat protein [General function	100.0
PHA02876	682	ankyrin repeat protein; Provisional	100.0
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	100.0
PHA02791	284	ankyrin-like protein; Provisional	100.0
PHA02874	434	ankyrin repeat protein; Provisional	100.0
PHA03100	480	ankyrin repeat protein; Provisional	100.0
PHA02730	672	ankyrin-like protein; Provisional	100.0
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	100.0
KOG4412	226	consensus 26S proteasome regulatory complex, subun	100.0
PHA02917	661	ankyrin-like protein; Provisional	100.0
PHA03100	480	ankyrin repeat protein; Provisional	100.0
PHA02875	413	ankyrin repeat protein; Provisional	100.0
PHA03095	471	ankyrin-like protein; Provisional	100.0
PHA02878	477	ankyrin repeat protein; Provisional	100.0
KOG4177	1143	consensus Ankyrin [Cell wall/membrane/envelope bio	100.0
PHA02791	284	ankyrin-like protein; Provisional	99.98
KOG4412	226	consensus 26S proteasome regulatory complex, subun	99.98
PHA02989	494	ankyrin repeat protein; Provisional	99.97
KOG0508	615	consensus Ankyrin repeat protein [General function	99.97
PHA02875	413	ankyrin repeat protein; Provisional	99.97
PHA02878	477	ankyrin repeat protein; Provisional	99.97
PHA02917	661	ankyrin-like protein; Provisional	99.97
KOG4177	1143	consensus Ankyrin [Cell wall/membrane/envelope bio	99.97
KOG0508	615	consensus Ankyrin repeat protein [General function	99.97
PHA02798	489	ankyrin-like protein; Provisional	99.97
PHA02989	494	ankyrin repeat protein; Provisional	99.97
PHA02798	489	ankyrin-like protein; Provisional	99.96
PHA02730	672	ankyrin-like protein; Provisional	99.96
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.96
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.96
PHA02792	631	ankyrin-like protein; Provisional	99.95
PHA02792	631	ankyrin-like protein; Provisional	99.93
PHA02859	209	ankyrin repeat protein; Provisional	99.93
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.91
KOG0507	854	consensus CASK-interacting adaptor protein (caskin	99.91
PHA02859	209	ankyrin repeat protein; Provisional	99.91
PF13962	113	PGG: Domain of unknown function	99.91
KOG0502	296	consensus Integral membrane ankyrin-repeat protein	99.9
PHA02795	437	ankyrin-like protein; Provisional	99.9
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.89
PHA02795	437	ankyrin-like protein; Provisional	99.89
KOG0502	296	consensus Integral membrane ankyrin-repeat protein	99.88
KOG0507	854	consensus CASK-interacting adaptor protein (caskin	99.88
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.88
KOG4369	2131	consensus RTK signaling protein MASK/UNC-44 [Signa	99.88
KOG0514	452	consensus Ankyrin repeat protein [General function	99.85
KOG4369	2131	consensus RTK signaling protein MASK/UNC-44 [Signa	99.85
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.84
KOG0505	527	consensus Myosin phosphatase, regulatory subunit [	99.81
KOG3676	782	consensus Ca2+-permeable cation channel OSM-9 and	99.78
KOG0514	452	consensus Ankyrin repeat protein [General function	99.78
PHA02741	169	hypothetical protein; Provisional	99.77
PHA02743	166	Viral ankyrin protein; Provisional	99.75
PHA02736	154	Viral ankyrin protein; Provisional	99.74
KOG0512	228	consensus Fetal globin-inducing factor (contains a	99.74
KOG0505	527	consensus Myosin phosphatase, regulatory subunit [	99.72
PHA02741	169	hypothetical protein; Provisional	99.72
PHA02743	166	Viral ankyrin protein; Provisional	99.72
PHA02736	154	Viral ankyrin protein; Provisional	99.71
PHA02884	300	ankyrin repeat protein; Provisional	99.69
KOG0512	228	consensus Fetal globin-inducing factor (contains a	99.69
PHA02884	300	ankyrin repeat protein; Provisional	99.69
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.66
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.61
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.56
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.54
KOG3676	782	consensus Ca2+-permeable cation channel OSM-9 and	99.53
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.51
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.44
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.39
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.35
KOG4214	117	consensus Myotrophin and similar proteins [Transcr	99.3
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.3
KOG4214	117	consensus Myotrophin and similar proteins [Transcr	99.29
KOG0515	752	consensus p53-interacting protein 53BP/ASPP, conta	99.28
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.27
KOG1710	396	consensus MYND Zn-finger and ankyrin repeat protei	99.23
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.22
KOG1710	396	consensus MYND Zn-finger and ankyrin repeat protei	99.21
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.19
KOG0515	752	consensus p53-interacting protein 53BP/ASPP, conta	99.16
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.12
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.08
KOG0782	1004	consensus Predicted diacylglycerol kinase [Signal	98.8
KOG0782	1004	consensus Predicted diacylglycerol kinase [Signal	98.53
KOG3609	822	consensus Receptor-activated Ca2+-permeable cation	98.46
PF13606	30	Ank_3: Ankyrin repeat	98.42
KOG0818	669	consensus GTPase-activating proteins of the GIT fa	98.39
KOG0506	622	consensus Glutaminase (contains ankyrin repeat) [A	98.35
KOG0783	1267	consensus Uncharacterized conserved protein, conta	98.35
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.35
KOG0783	1267	consensus Uncharacterized conserved protein, conta	98.3
KOG0522	560	consensus Ankyrin repeat protein [General function	98.3
KOG0506	622	consensus Glutaminase (contains ankyrin repeat) [A	98.3
PF13606	30	Ank_3: Ankyrin repeat	98.29
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.22
KOG0522	560	consensus Ankyrin repeat protein [General function	98.13
KOG0705	749	consensus GTPase-activating protein Centaurin gamm	98.09
KOG0818	669	consensus GTPase-activating proteins of the GIT fa	98.07
KOG3609	822	consensus Receptor-activated Ca2+-permeable cation	97.98
KOG0520	975	consensus Uncharacterized conserved protein, conta	97.74
KOG0511	516	consensus Ankyrin repeat protein [General function	97.69
KOG0705	749	consensus GTPase-activating protein Centaurin gamm	97.67
KOG2384	223	consensus Major histocompatibility complex protein	97.63
KOG0521	785	consensus Putative GTPase activating proteins (GAP	97.62
KOG2384	223	consensus Major histocompatibility complex protein	97.43
KOG0520	975	consensus Uncharacterized conserved protein, conta	97.34
KOG0521	785	consensus Putative GTPase activating proteins (GAP	97.24
KOG0511	516	consensus Ankyrin repeat protein [General function	97.09
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	95.98
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	95.1
KOG2505	591	consensus Ankyrin repeat protein [General function	94.39
KOG2505	591	consensus Ankyrin repeat protein [General function	94.19
PF03158	192	DUF249: Multigene family 530 protein; InterPro: IP	92.12
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	91.12
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	90.6
PF06570	206	DUF1129: Protein of unknown function (DUF1129); In	82.48
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	81.54
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	80.94

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]

Probab=100.00  E-value=3.9e-38  Score=334.27  Aligned_cols=195  Identities=16%  Similarity=0.162  Sum_probs=154.0

Q ss_pred             hhhhhccHHHHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCcc
Q 005556           62 HEKYRRHLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISET  141 (691)
Q Consensus        62 ~~~~~~~~~L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~  141 (691)
                      ..+..+++|||.|+....++.++.+++.+.+.. -  .+..+.+|||+      |+..|  ..++++.|++++   .+  
T Consensus        83 a~D~~~n~~l~~a~~~~~~~~i~~Lls~gad~~-~--~n~~~~aplh~------A~~~~--~~s~L~~Ll~~~---~d--  146 (929)
T KOG0510|consen   83 AKDSADNTPLHAAVEYNQGDKIQVLLSYGADTP-L--RNLNKNAPLHL------AADSG--NYSCLKLLLDYG---AD--  146 (929)
T ss_pred             hhhcccCchhHHHhhcchHHHHHHHHhcCCCCC-h--hhhhccCchhh------ccccc--hHHHHHHHHHhc---CC--
Confidence            344457899999999999999999998866542 2  37788999999      99999  999999999997   44  


Q ss_pred             ccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCCC--CccccccCCC
Q 005556          142 LSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPG--RVENFYCGGD  218 (691)
Q Consensus       142 l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~--~~~~~~~~~~  218 (691)
                      ++..|..|.||||+||..++.|..+.|++.+++..  ..|. |.+|+|.|++.|..|..+..+.+.+.  ....+.-+.+
T Consensus       147 vnl~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~--K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~  224 (929)
T KOG0510|consen  147 VNLEDENGFTPLHLAARKNKVEAKKELINKGADPC--KSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNE  224 (929)
T ss_pred             ccccccCCCchhhHHHhcChHHHHHHHHhcCCCCC--cccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCC
Confidence            78889999999999999999998899999988887  6777 99999999999999999998873221  1112346888


Q ss_pred             CCcHHHHHHHcCcHHHHHHHHHhCCCCcc--------------CCCCC-CCHHHHHHcCCCccccCCcchhhhhhhhc
Q 005556          219 GGRLLSDLIKANLYDVALNLLKNHPEIVH--------------DIDSQ-KMALDSLALKPYAFESGSRLGCLEGFIYK  281 (691)
Q Consensus       219 G~t~Lh~Ai~~g~~~iv~~Ll~~~~~~~~--------------~~d~~-~TpLh~Aa~~~~~f~s~~~l~~~~~li~~  281 (691)
                      |.||||.|+..|+.++++.+|+.+.....              ..|.+ .||||+||+.|       +.+.++.++..
T Consensus       225 ~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G-------~~~svd~Ll~~  295 (929)
T KOG0510|consen  225 KATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQG-------GPESVDNLLGF  295 (929)
T ss_pred             CCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcC-------ChhHHHHHHHc
Confidence            99999999999999999999987764332              23555 89999999864       33555555543

>PHA02876 ankyrin repeat protein; Provisional

Probab=100.00  E-value=4.6e-38  Score=362.61  Aligned_cols=351  Identities=14%  Similarity=0.049  Sum_probs=265.0

Q ss_pred             hccHHHHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhccc---------------------------------
Q 005556           66 RRHLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMG---------------------------------  112 (691)
Q Consensus        66 ~~~~~L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~---------------------------------  112 (691)
                      .++||||.|+..|+.+.|+.+++++|+.....  |..|.||||++..                                 
T Consensus        40 ~~~t~LH~A~~~g~~e~V~~ll~~~~~~~~~~--~~~~~tpLh~a~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  117 (682)
T PHA02876         40 IPFTAIHQALQLRQIDIVEEIIQQNPELIYIT--DHKCHSTLHTICIIPNVMDIVISLTLDCDIILDIKYASIILNKHKL  117 (682)
T ss_pred             ccchHHHHHHHHHhhhHHHHHHHhCcccchhh--chhhccccccccCCCCccccccccccchhhcccccHHHHHHHHHHH
Confidence            46899999999999999999999999876665  8899999996220                                 


Q ss_pred             -------------------------------ccchhccCCCCHHHHHHHHhccCCCCCccccccCCCCChHHHHHHHcCC
Q 005556          113 -------------------------------LLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGN  161 (691)
Q Consensus       113 -------------------------------l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~  161 (691)
                                                     |+.|+..|  +.++++.|++.|   .+  ++.+|..|.||||+||..|+
T Consensus       118 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~i~k~Ll~~G---ad--vn~~d~~G~TpLh~Aa~~G~  190 (682)
T PHA02876        118 DEACIHILKEAISGNDIHYDKINESIEYMKLIKERIQQD--ELLIAEMLLEGG---AD--VNAKDIYCITPIHYAAERGN  190 (682)
T ss_pred             HHHHHHHHHHHhcCCcccHHhhccchhhhHHHHHHHHCC--cHHHHHHHHhCC---CC--CCCCCCCCCCHHHHHHHCCC
Confidence                                           22233567  899999999997   54  78899999999999999999


Q ss_pred             HHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCCCCcc--------------------------ccc
Q 005556          162 LKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVE--------------------------NFY  214 (691)
Q Consensus       162 ~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~--------------------------~~~  214 (691)
                      .++|++|++.+++..  ..+. |.||||+|+..|+.+++++|++.+.....                          ...
T Consensus       191 ~~iv~~LL~~Gad~n--~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~  268 (682)
T PHA02876        191 AKMVNLLLSYGADVN--IIALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNS  268 (682)
T ss_pred             HHHHHHHHHCCCCcC--ccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence            999999999999877  6777 99999999999999999998876543211                          113


Q ss_pred             cCCCCCcHHHHHHHcCcH-HHHHHHHHhCCCCccCCCCCCCHHHHHHcCCCccccCCcchhhhhhhhccccccccccCCC
Q 005556          215 CGGDGGRLLSDLIKANLY-DVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTN  293 (691)
Q Consensus       215 ~~~~G~t~Lh~Ai~~g~~-~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~  293 (691)
                      .+..|.||||+|+..++. ++++.|++.+.+.......+.||||+|+..|      .....++.++.....+..      
T Consensus       269 ~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g------~~~~~v~~Ll~~gadin~------  336 (682)
T PHA02876        269 IDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNG------YDTENIRTLIMLGADVNA------  336 (682)
T ss_pred             CCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhC------CCHHHHHHHHHcCCCCCC------
Confidence            567799999999998886 5888888888877664333399999999864      334556666554322210      


Q ss_pred             CCCCCCCCCCCCCCcccCCCCCCCCCCCcccccccCCCcchhHHHHHHHh-hhHHHHHHHHHHHHHHHhhhhhhccCCCh
Q 005556          294 DNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKL-THMRTVEIVRFICENVIWTNRANRNKLKG  372 (691)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~lL~~l~~~~~~~~~~~~~~g~t  372 (691)
                               .+..+                          .++.+++... ++...+.+|   .+...+++..+ ..|.|
T Consensus       337 ---------~d~~g--------------------------~TpLh~A~~~~~~~~iv~lL---l~~gadin~~d-~~G~T  377 (682)
T PHA02876        337 ---------ADRLY--------------------------ITPLHQASTLDRNKDIVITL---LELGANVNARD-YCDKT  377 (682)
T ss_pred             ---------cccCC--------------------------CcHHHHHHHhCCcHHHHHHH---HHcCCCCccCC-CCCCC
Confidence                     00111                          1224444443 344444444   34444444443 56899


Q ss_pred             HHHHHHHcCcHHHHHHHHHHCCccccccccCCCcHHHHHHhcCC-hhHHHHHhcCCCcccccccccCCCCchhhhhhccC
Q 005556          373 ALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRR-EKVFNLIHGVNSSYFSISLEDKSGNNILHLTGKSE  451 (691)
Q Consensus       373 pLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~-~~iv~~Ll~~~~~~~~~n~~D~~G~TpLHlAa~~g  451 (691)
                      |||+|+..|+.++++.|++.+++. +..+..|.||||+|+..++ ..++++|++.|   +++|.+|.+|+||||+|+..+
T Consensus       378 pLh~Aa~~~~~~iv~~Ll~~gad~-~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~g---adin~~d~~G~TpLh~Aa~~~  453 (682)
T PHA02876        378 PIHYAAVRNNVVIINTLLDYGADI-EALSQKIGTALHFALCGTNPYMSVKTLIDRG---ANVNSKNKDLSTPLHYACKKN  453 (682)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCc-cccCCCCCchHHHHHHcCCHHHHHHHHHhCC---CCCCcCCCCCChHHHHHHHhC
Confidence            999999999999999999998874 5788999999999998765 46799999998   999999999999999999876


Q ss_pred             CCCCCCchHHhhHHHHHHHHhhhhcC-CchhHHHhhhcCCCchhhhhH
Q 005556          452 PSRHVPGAALKMQRELQWFKLAKNLV-HPQFREAENKLEQTPTEVFTK  498 (691)
Q Consensus       452 ~~~~v~~~al~~~~el~~~~~v~~~~-~~~~~~~~N~~G~Tp~di~~~  498 (691)
                      ..       .         +.++.++ ....++.+|.+|.||+.++.+
T Consensus       454 ~~-------~---------~iv~lLl~~Gad~n~~d~~g~tpl~~a~~  485 (682)
T PHA02876        454 CK-------L---------DVIEMLLDNGADVNAINIQNQYPLLIALE  485 (682)
T ss_pred             Cc-------H---------HHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence            32       0         1111111 234588899999999998764

>PHA02874 ankyrin repeat protein; Provisional

Probab=100.00  E-value=4e-36  Score=328.34  Aligned_cols=275  Identities=12%  Similarity=0.083  Sum_probs=229.3

Q ss_pred             HHHHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCCC
Q 005556           69 LELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGG  148 (691)
Q Consensus        69 ~~L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~  148 (691)
                      ..|+.|+..|+.+.++.+++.++..++..  +..|.||||.      |+..|  +.++|++|++.|   +.  ++..+..
T Consensus         3 ~~l~~ai~~gd~~~v~~ll~~~~~~~n~~--~~~~~tpL~~------A~~~g--~~~iv~~Ll~~G---a~--~n~~~~~   67 (434)
T PHA02874          3 QDLRMCIYSGDIEAIEKIIKNKGNCINIS--VDETTTPLID------AIRSG--DAKIVELFIKHG---AD--INHINTK   67 (434)
T ss_pred             HHHHHHHhcCCHHHHHHHHHcCCCCCCCc--CCCCCCHHHH------HHHcC--CHHHHHHHHHCC---CC--CCCCCCC
Confidence            36899999999999999999877766655  7889999999      99999  999999999998   44  6778999


Q ss_pred             CChHHHHHHHcCCHHHHHHHHHcCchhh---------------------hcCCCC-CCcHHHHHHHcCChHHHHHHHhcC
Q 005556          149 GNTVLSLCAIRGNLKASKILVKHKHELL---------------------IKQTNQ-NSLPVHLAALFGHKDTFEYLLEET  206 (691)
Q Consensus       149 G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~---------------------~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~  206 (691)
                      |.||||.|+..|+.+++++|++.+.+..                     ++.++. |.||||+|+..|+.++|++|++.+
T Consensus        68 ~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~g  147 (434)
T PHA02874         68 IPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYG  147 (434)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCC
Confidence            9999999999999999999998865321                     135677 999999999999999999999999


Q ss_pred             CCCccccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCCccCCCCCCCHHHHHHcCCCccccCCcchhhhhhhhcccccc
Q 005556          207 PGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVT  286 (691)
Q Consensus       207 ~~~~~~~~~~~~G~t~Lh~Ai~~g~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~  286 (691)
                      ++.+.   +|.+|.||||+|+..|+.+++++|++++++.......+.||||+|+..+.       .++++.++...    
T Consensus       148 ad~n~---~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~-------~~iv~~Ll~~g----  213 (434)
T PHA02874        148 ADVNI---EDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGD-------YACIKLLIDHG----  213 (434)
T ss_pred             CCCCC---cCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC-------HHHHHHHHhCC----
Confidence            87544   78999999999999999999999999998876644334999999998642       34455444322    


Q ss_pred             ccccCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCcccccccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhh
Q 005556          287 KQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRAN  366 (691)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~~~~  366 (691)
                                                                                               .+.+...
T Consensus       214 -------------------------------------------------------------------------~~i~~~~  220 (434)
T PHA02874        214 -------------------------------------------------------------------------NHIMNKC  220 (434)
T ss_pred             -------------------------------------------------------------------------CCCcCCC
Confidence                                                                                     1111111


Q ss_pred             ccCCChHHHHHHHcCcHHHHHHHHHHCCccccccccCCCcHHHHHHhcC-ChhHHHHHhcCCCcccccccccCCCCchhh
Q 005556          367 RNKLKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHR-REKVFNLIHGVNSSYFSISLEDKSGNNILH  445 (691)
Q Consensus       367 ~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~-~~~iv~~Ll~~~~~~~~~n~~D~~G~TpLH  445 (691)
                       ..|.||||.|+..+. +.++.|+ .+.+ ++.+|.+|+||||+|+..+ +.+++++|++.|   ++++.+|.+|+||||
T Consensus       221 -~~g~TpL~~A~~~~~-~~i~~Ll-~~~~-in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~g---ad~n~~d~~g~TpL~  293 (434)
T PHA02874        221 -KNGFTPLHNAIIHNR-SAIELLI-NNAS-INDQDIDGSTPLHHAINPPCDIDIIDILLYHK---ADISIKDNKGENPID  293 (434)
T ss_pred             -CCCCCHHHHHHHCCh-HHHHHHH-cCCC-CCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCc---CCCCCCCCCCCCHHH
Confidence             458999999999876 5666666 3444 5788999999999999876 789999999998   999999999999999


Q ss_pred             hhhccCC
Q 005556          446 LTGKSEP  452 (691)
Q Consensus       446 lAa~~g~  452 (691)
                      +|++.++
T Consensus       294 ~A~~~~~  300 (434)
T PHA02874        294 TAFKYIN  300 (434)
T ss_pred             HHHHhCC
Confidence            9998874

>PHA02946 ankyin-like protein; Provisional

Probab=100.00  E-value=8.9e-36  Score=323.01  Aligned_cols=322  Identities=11%  Similarity=0.022  Sum_probs=199.7

Q ss_pred             cHHHHHHH--HcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCcccccc
Q 005556           68 HLELYRMI--QMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCK  145 (691)
Q Consensus        68 ~~~L~~Aa--~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~  145 (691)
                      +++||.++  ..++.+.|+.|++.+.+ ++.+  |.+|+||||+      ||..|  +.++|+.|+++|   ++  ++.+
T Consensus        38 ~~~Lh~~~~~~~~~~~iv~~Ll~~Gad-vn~~--d~~G~TpLh~------Aa~~g--~~eiv~lLL~~G---Ad--in~~  101 (446)
T PHA02946         38 YHILHAYCGIKGLDERFVEELLHRGYS-PNET--DDDGNYPLHI------ASKIN--NNRIVAMLLTHG---AD--PNAC  101 (446)
T ss_pred             ChHHHHHHHhcCCCHHHHHHHHHCcCC-CCcc--CCCCCCHHHH------HHHcC--CHHHHHHHHHCc---CC--CCCC
Confidence            46666654  33456677777776544 3444  7777777777      77777  777777777776   43  5667


Q ss_pred             CCCCChHHHHHHHcC--CHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCCCCccccccCCCCCcH
Q 005556          146 DGGGNTVLSLCAIRG--NLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRL  222 (691)
Q Consensus       146 d~~G~TpLh~Aa~~G--~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~  222 (691)
                      |..|.||||+|+..+  +.+++++|++.++++. ...+. |.|||| ||..|+.+++++|++.+.+...   +|..|.||
T Consensus       102 d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin-~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~---~d~~G~t~  176 (446)
T PHA02946        102 DKQHKTPLYYLSGTDDEVIERINLLVQYGAKIN-NSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEARI---VDKFGKNH  176 (446)
T ss_pred             CCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcc-cccCCCCCcHHH-HHHCCChHHHHHHHhccccccc---cCCCCCCH
Confidence            777777777777655  3677777777777766 45566 777776 5566777777777777765433   67777777


Q ss_pred             HHHHHHcCc--HHHHHHHHHhCCCCccCCCCCCCHHHHHHcCCCccccCCcchhhhhhhhccccccccccCCCCCCCCCC
Q 005556          223 LSDLIKANL--YDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAG  300 (691)
Q Consensus       223 Lh~Ai~~g~--~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~  300 (691)
                      ||.|+..++  .+++++|++.+.++......+.||||+|+..+.     ...++++.++. ..++               
T Consensus       177 Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~-----~~~~iv~lLl~-gadi---------------  235 (446)
T PHA02946        177 IHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTV-----KNVDIINLLLP-STDV---------------  235 (446)
T ss_pred             HHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCC-----CcHHHHHHHHc-CCCC---------------
Confidence            777766443  577777777777766543333777777776531     23344444432 1111               


Q ss_pred             CCCCCCCcccCCCCCCCCC--CCcccccccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHH
Q 005556          301 DTENGIGTTNGHSKKSIPY--GSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTAT  378 (691)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa  378 (691)
                      +.++..|.|+++.+.....  ...+.+...+....+-....+...+.....+++          +..+...|.||||+|+
T Consensus       236 n~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~~~~~~a~~~~~~~~~e~l----------~~~g~~~~~TpLh~Aa  305 (446)
T PHA02946        236 NKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQTVNICIFYDRDDVLEII----------NDKGKQYDSTDFKMAV  305 (446)
T ss_pred             CCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCCCcHHHHHHHcCchHHHHHH----------HHcCcccCCCHHHHHH
Confidence            1112222233221110000  000000000000000000111111111222221          1222235789999999


Q ss_pred             HcCcHHHHHHHHHHCCccccccccCCCcHHHHHHhcCChhHHHHHhcCCCcccccccccCCCCchhhhhhccCCC
Q 005556          379 RLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHLTGKSEPS  453 (691)
Q Consensus       379 ~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~D~~G~TpLHlAa~~g~~  453 (691)
                      ++|+.++|++|++++        ..|+||||+|+.+++.+++++|+.+|   +++|.+ .+|+||||+|++.++.
T Consensus       306 ~~g~~eivk~Ll~~~--------~~~~t~L~~A~~~~~~~~v~~Ll~~g---a~~n~~-~~G~t~l~~a~~~~~~  368 (446)
T PHA02946        306 EVGSIRCVKYLLDND--------IICEDAMYYAVLSEYETMVDYLLFNH---FSVDSV-VNGHTCMSECVRLNNP  368 (446)
T ss_pred             HcCCHHHHHHHHHCC--------CccccHHHHHHHhCHHHHHHHHHHCC---CCCCCc-cccccHHHHHHHcCCH
Confidence            999999999999874        36799999999999999999999998   889985 6899999999999985

>PHA03095 ankyrin-like protein; Provisional

Probab=100.00  E-value=2e-34  Score=319.46  Aligned_cols=276  Identities=14%  Similarity=0.111  Sum_probs=231.6

Q ss_pred             HHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccC-CCCHHHHHHHHhccCCCCCccccccCCCCC
Q 005556           72 YRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETD-DEATDLIDKLAQSTDVDISETLSCKDGGGN  150 (691)
Q Consensus        72 ~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g-~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~  150 (691)
                      +.++..++.+.|+.|++.+.+ ++.+  +..|.||||+      |+..| ..+.++++.|++.|   ++  ++.+|..|.
T Consensus        19 ~~~~~~~~~~~v~~Ll~~ga~-vn~~--~~~g~t~Lh~------a~~~~~~~~~~iv~~Ll~~G---ad--in~~~~~g~   84 (471)
T PHA03095         19 LLNASNVTVEEVRRLLAAGAD-VNFR--GEYGKTPLHL------YLHYSSEKVKDIVRLLLEAG---AD--VNAPERCGF   84 (471)
T ss_pred             HHcCCCCCHHHHHHHHHcCCC-cccC--CCCCCCHHHH------HHHhcCCChHHHHHHHHHCC---CC--CCCCCCCCC
Confidence            667889999999999988665 4555  8889999999      99876 33899999999998   54  788999999


Q ss_pred             hHHHHHHHcC-CHHHHHHHHHcCchhhhcCCCC-CCcHHHHHH--HcCChHHHHHHHhcCCCCccccccCCCCCcHHHHH
Q 005556          151 TVLSLCAIRG-NLKASKILVKHKHELLIKQTNQ-NSLPVHLAA--LFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDL  226 (691)
Q Consensus       151 TpLh~Aa~~G-~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa--~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~A  226 (691)
                      ||||+|+..| +.+++++|++.++++.  .++. |.||||+|+  ..++.+++++|++.+++...   .|..|.||||+|
T Consensus        85 TpLh~A~~~~~~~~iv~lLl~~ga~in--~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~---~d~~g~tpL~~a  159 (471)
T PHA03095         85 TPLHLYLYNATTLDVIKLLIKAGADVN--AKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNA---LDLYGMTPLAVL  159 (471)
T ss_pred             CHHHHHHHcCCcHHHHHHHHHcCCCCC--CCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCc---cCCCCCCHHHHH
Confidence            9999999999 5999999999999876  7888 999999999  56789999999999988543   789999999999


Q ss_pred             HHcC--cHHHHHHHHHhCCCCccCCCCC-CCHHHHHHcCCCccccCCcchhhhhhhhccccccccccCCCCCCCCCCCCC
Q 005556          227 IKAN--LYDVALNLLKNHPEIVHDIDSQ-KMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTE  303 (691)
Q Consensus       227 i~~g--~~~iv~~Ll~~~~~~~~~~d~~-~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~  303 (691)
                      +..+  +.++++.|++++++.... +.. .||||+++....     ....+++.++.                       
T Consensus       160 ~~~~~~~~~iv~~Ll~~g~~~~~~-d~~g~t~Lh~~~~~~~-----~~~~i~~~Ll~-----------------------  210 (471)
T PHA03095        160 LKSRNANVELLRLLIDAGADVYAV-DDRFRSLLHHHLQSFK-----PRARIVRELIR-----------------------  210 (471)
T ss_pred             HHcCCCCHHHHHHHHHcCCCCccc-CCCCCCHHHHHHHHCC-----CcHHHHHHHHH-----------------------
Confidence            9876  689999999999998876 556 999999987421     12233333332                       


Q ss_pred             CCCCcccCCCCCCCCCCCcccccccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHcCcH
Q 005556          304 NGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIP  383 (691)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~  383 (691)
                                                                            ...+.+..+ ..|.||||+||..|+.
T Consensus       211 ------------------------------------------------------~g~~~~~~d-~~g~tpLh~Aa~~~~~  235 (471)
T PHA03095        211 ------------------------------------------------------AGCDPAATD-MLGNTPLHSMATGSSC  235 (471)
T ss_pred             ------------------------------------------------------cCCCCcccC-CCCCCHHHHHHhcCCc
Confidence                                                                  222222222 5689999999999975


Q ss_pred             --HHHHHHHHHCCccccccccCCCcHHHHHHhcCChhHHHHHhcCCCcccccccccCCCCchhhhhhccCCCC
Q 005556          384 --EFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHLTGKSEPSR  454 (691)
Q Consensus       384 --eiv~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~D~~G~TpLHlAa~~g~~~  454 (691)
                        .+++.|++.+.+ ++.+|..|+||||+|+..|+.+++++|++.|   +++|.+|.+|+||||+|+..|+.+
T Consensus       236 ~~~~v~~ll~~g~d-in~~d~~g~TpLh~A~~~~~~~~v~~LL~~g---ad~n~~~~~g~tpl~~A~~~~~~~  304 (471)
T PHA03095        236 KRSLVLPLLIAGIS-INARNRYGQTPLHYAAVFNNPRACRRLIALG---ADINAVSSDGNTPLSLMVRNNNGR  304 (471)
T ss_pred             hHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCcccCCCCCCHHHHHHHhCCHH
Confidence              688888988776 5688999999999999999999999999998   999999999999999999999853

>PHA02946 ankyin-like protein; Provisional

Probab=100.00  E-value=1.9e-33  Score=304.77  Aligned_cols=334  Identities=11%  Similarity=0.048  Sum_probs=233.8

Q ss_pred             cHHHHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCC
Q 005556           68 HLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDG  147 (691)
Q Consensus        68 ~~~L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~  147 (691)
                      +-+++.++..|+.+.++.+++..        ....+.++||.      ++..+..+.++|+.|++.|   .+  ++.+|.
T Consensus        10 ~~sl~~~~~~~n~~~~~~~l~~~--------~~~g~~~~Lh~------~~~~~~~~~~iv~~Ll~~G---ad--vn~~d~   70 (446)
T PHA02946         10 YLSLYAKYNSKNLDVFRNMLQAI--------EPSGNYHILHA------YCGIKGLDERFVEELLHRG---YS--PNETDD   70 (446)
T ss_pred             HHHHHHHHccCcHHHHHHHHhcc--------CCCCCChHHHH------HHHhcCCCHHHHHHHHHCc---CC--CCccCC
Confidence            46789999999999999998642        12334799998      7643322789999999998   54  788999


Q ss_pred             CCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCC--hHHHHHHHhcCCCCccccccCCCCCcHHH
Q 005556          148 GGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGH--KDTFEYLLEETPGRVENFYCGGDGGRLLS  224 (691)
Q Consensus       148 ~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~--~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh  224 (691)
                      +|.||||+||+.|+.++|++|+++++++.  .+|. |.||||+|+..++  .+++++|++++++.+.  ..|.+|.||||
T Consensus        71 ~G~TpLh~Aa~~g~~eiv~lLL~~GAdin--~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~--~~d~~g~tpL~  146 (446)
T PHA02946         71 DGNYPLHIASKINNNRIVAMLLTHGADPN--ACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINN--SVDEEGCGPLL  146 (446)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHCcCCCC--CCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCccc--ccCCCCCcHHH
Confidence            99999999999999999999999998877  7888 9999999998764  8999999999988543  36889999998


Q ss_pred             HHHHcCcHHHHHHHHHhCCCCccCCCCCCCHHHHHHcCCCccccCCcchhhhhhhhccccccccccCCCCCCCCCCCCCC
Q 005556          225 DLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTEN  304 (691)
Q Consensus       225 ~Ai~~g~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~  304 (691)
                       |+..++.++++.|++.+.+.......+.||||+|+..++     .....++.++....++..               .+
T Consensus       147 -aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~-----~~~~~v~~Ll~~Gadin~---------------~d  205 (446)
T PHA02946        147 -ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDN-----PKASTISWMMKLGISPSK---------------PD  205 (446)
T ss_pred             -HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcC-----CCHHHHHHHHHcCCCCcc---------------cC
Confidence             666789999999999998876643333999999987532     234566666654432211               01


Q ss_pred             CCCcccCCCCCCCCCCCcccccccCCCcchhHHHHHHHhh--hHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHcCc
Q 005556          305 GIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLT--HMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGI  382 (691)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~  382 (691)
                      ..|                          .++.++++..+  +...+++|.   . ..+++..+ ..|.||||+|++.|+
T Consensus       206 ~~G--------------------------~TpLH~Aa~~~~~~~~iv~lLl---~-gadin~~d-~~G~TpLh~A~~~~~  254 (446)
T PHA02946        206 HDG--------------------------NTPLHIVCSKTVKNVDIINLLL---P-STDVNKQN-KFGDSPLTLLIKTLS  254 (446)
T ss_pred             CCC--------------------------CCHHHHHHHcCCCcHHHHHHHH---c-CCCCCCCC-CCCCCHHHHHHHhCC
Confidence            111                          12344454443  444444432   1 23444333 567888888888877


Q ss_pred             -HHHHHHHHHHCCccccc----------------c----ccCCCcHHHHHHhcCChhHHHHHhcCCCcccccccccCCCC
Q 005556          383 -PEFVNEFIMAYNYSALL----------------L----NSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGN  441 (691)
Q Consensus       383 -~eiv~~LL~~~~~~~~~----------------~----d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~D~~G~  441 (691)
                       .++++.|+..+......                .    +..|+||||+|+++|+.+++++|++++          .+|+
T Consensus       255 ~~~~~~~Ll~~g~~~~~~~~~~a~~~~~~~~~e~l~~~g~~~~~TpLh~Aa~~g~~eivk~Ll~~~----------~~~~  324 (446)
T PHA02946        255 PAHLINKLLSTSNVITDQTVNICIFYDRDDVLEIINDKGKQYDSTDFKMAVEVGSIRCVKYLLDND----------IICE  324 (446)
T ss_pred             hHHHHHHHHhCCCCCCCcHHHHHHHcCchHHHHHHHHcCcccCCCHHHHHHHcCCHHHHHHHHHCC----------Cccc
Confidence             47777787776442211                0    124668888888888888888888775          2567


Q ss_pred             chhhhhhccCCCCCCCchHHhhHHHHHHHHhhhhcC-CchhHHHhhhcCCCchhhhhHH-HHHHH
Q 005556          442 NILHLTGKSEPSRHVPGAALKMQRELQWFKLAKNLV-HPQFREAENKLEQTPTEVFTKE-HKELA  504 (691)
Q Consensus       442 TpLHlAa~~g~~~~v~~~al~~~~el~~~~~v~~~~-~~~~~~~~N~~G~Tp~di~~~~-~~~l~  504 (691)
                      ||||+|+..++.+                 .++.++ +...++.+ .+|+||++++.+. +.+++
T Consensus       325 t~L~~A~~~~~~~-----------------~v~~Ll~~ga~~n~~-~~G~t~l~~a~~~~~~~~~  371 (446)
T PHA02946        325 DAMYYAVLSEYET-----------------MVDYLLFNHFSVDSV-VNGHTCMSECVRLNNPVIL  371 (446)
T ss_pred             cHHHHHHHhCHHH-----------------HHHHHHHCCCCCCCc-cccccHHHHHHHcCCHHHH
Confidence            8888888777521                 122222 22335554 4799999998654 33443

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]

Probab=100.00  E-value=6.1e-35  Score=310.07  Aligned_cols=281  Identities=14%  Similarity=0.126  Sum_probs=235.8

Q ss_pred             hhhhhccHHHHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCcc
Q 005556           62 HEKYRRHLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISET  141 (691)
Q Consensus        62 ~~~~~~~~~L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~  141 (691)
                      ..+..+.+|+|.|+..|+.+.++.|++.+. .++..  |..|.||||+      ||..+  +.|..+.|++.+   ..  
T Consensus       116 ~~n~~~~aplh~A~~~~~~s~L~~Ll~~~~-dvnl~--de~~~TpLh~------A~~~~--~~E~~k~Li~~~---a~--  179 (929)
T KOG0510|consen  116 LRNLNKNAPLHLAADSGNYSCLKLLLDYGA-DVNLE--DENGFTPLHL------AARKN--KVEAKKELINKG---AD--  179 (929)
T ss_pred             hhhhhccCchhhccccchHHHHHHHHHhcC-Ccccc--ccCCCchhhH------HHhcC--hHHHHHHHHhcC---CC--
Confidence            345557899999999999999999999873 34554  9999999999      99999  999889999998   33  


Q ss_pred             ccccCCCCChHHHHHHHcCCHHHHHHHHHc-----CchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCCCCccc---
Q 005556          142 LSCKDGGGNTVLSLCAIRGNLKASKILVKH-----KHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVEN---  212 (691)
Q Consensus       142 l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~-----~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~---  212 (691)
                      ....|.+|++|+|.|+++|..++.+.++.+     ...++  .-|+ |.||||.|+..|+.++++..|+.+......   
T Consensus       180 ~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in--~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~  257 (929)
T KOG0510|consen  180 PCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHIN--FDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLD  257 (929)
T ss_pred             CCcccCcCCchHHHHHHhcchhhhhhhhccccchhhcccc--cccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhH
Confidence            455799999999999999999999999994     33444  5567 999999999999999999999988654321   


Q ss_pred             ---------cccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCCccCCCCCCCHHHHHHcCCCccccCCcchhhhhhhhccc
Q 005556          213 ---------FYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCI  283 (691)
Q Consensus       213 ---------~~~~~~G~t~Lh~Ai~~g~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~~  283 (691)
                               ...|++|.||||+|++.|+.+.+..|+..+.+.......+.||||.||..|       ++..+++|+... 
T Consensus       258 ~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg-------~~ntv~rLL~~~-  329 (929)
T KOG0510|consen  258 AMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYG-------RINTVERLLQES-  329 (929)
T ss_pred             HHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcc-------cHHHHHHHHhCc-
Confidence                     246999999999999999999999999999999885533399999999964       445556554410 


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCcccccccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHhhh
Q 005556          284 PVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTN  363 (691)
Q Consensus       284 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~  363 (691)
                                                                                                +...++
T Consensus       330 --------------------------------------------------------------------------~~rlln  335 (929)
T KOG0510|consen  330 --------------------------------------------------------------------------DTRLLN  335 (929)
T ss_pred             --------------------------------------------------------------------------Cccccc
Confidence                                                                                      001111


Q ss_pred             hhhccCCChHHHHHHHcCcHHHHHHHHHHCCcccc--ccccCCCcHHHHHHhcCChhHHHHHhcCCCcccccccccCCCC
Q 005556          364 RANRNKLKGALFTATRLGIPEFVNEFIMAYNYSAL--LLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGN  441 (691)
Q Consensus       364 ~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~--~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~D~~G~  441 (691)
                      +++ -.|+||||+|+++||..+++.||++++...+  .+|++|.||||.|+..|+..+|++|+.+|   +++..+|+.|.
T Consensus       336 e~D-~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~G---a~I~~~n~~g~  411 (929)
T KOG0510|consen  336 ESD-LHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHG---ADIGVKNKKGK  411 (929)
T ss_pred             ccc-ccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcC---Cceeecccccc
Confidence            111 4589999999999999999999999998775  56999999999999999999999999998   99999999999


Q ss_pred             chhhh
Q 005556          442 NILHL  446 (691)
Q Consensus       442 TpLHl  446 (691)
                      |++|+
T Consensus       412 SA~~~  416 (929)
T KOG0510|consen  412 SAFDT  416 (929)
T ss_pred             ccccc
Confidence            99997

>PHA02876 ankyrin repeat protein; Provisional

Probab=100.00  E-value=2.5e-33  Score=323.31  Aligned_cols=311  Identities=11%  Similarity=0.017  Sum_probs=247.9

Q ss_pred             cHHHHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCC
Q 005556           68 HLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDG  147 (691)
Q Consensus        68 ~~~L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~  147 (691)
                      .++|+.|+..|+.++++.|++.+.+ ++.+  |..|+||||+      ||..|  +.++|++|++.|   ++  ++..+.
T Consensus       146 ~~~l~~~i~~~~~~i~k~Ll~~Gad-vn~~--d~~G~TpLh~------Aa~~G--~~~iv~~LL~~G---ad--~n~~~~  209 (682)
T PHA02876        146 MKLIKERIQQDELLIAEMLLEGGAD-VNAK--DIYCITPIHY------AAERG--NAKMVNLLLSYG---AD--VNIIAL  209 (682)
T ss_pred             hHHHHHHHHCCcHHHHHHHHhCCCC-CCCC--CCCCCCHHHH------HHHCC--CHHHHHHHHHCC---CC--cCccCC
Confidence            4678999999999999999988665 4555  8899999999      99999  999999999998   54  677899


Q ss_pred             CCChHHHHHHHcCCHHHHHHHHHcCchhh---------------------------hcCCCC-CCcHHHHHHHcCCh-HH
Q 005556          148 GGNTVLSLCAIRGNLKASKILVKHKHELL---------------------------IKQTNQ-NSLPVHLAALFGHK-DT  198 (691)
Q Consensus       148 ~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~---------------------------~~~~n~-G~TpLh~Aa~~g~~-~i  198 (691)
                      .|.||||+|+..|+.++++.|++.++++.                           ++..+. |.||||+|+..|+. ++
T Consensus       210 ~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~i  289 (682)
T PHA02876        210 DDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRL  289 (682)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHH
Confidence            99999999999999999998887654321                           135677 99999999999996 69


Q ss_pred             HHHHHhcCCCCccccccCCCCCcHHHHHHHcC-cHHHHHHHHHhCCCCccCCCCCCCHHHHHHcCCCccccCCcchhhhh
Q 005556          199 FEYLLEETPGRVENFYCGGDGGRLLSDLIKAN-LYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEG  277 (691)
Q Consensus       199 v~~Ll~~~~~~~~~~~~~~~G~t~Lh~Ai~~g-~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~~~f~s~~~l~~~~~  277 (691)
                      +++|++.+.+.+.   +|.+|.||||+|+..| ..++++.|+..+.+.......+.||||+|+..      +....+++.
T Consensus       290 v~lLl~~gadin~---~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~------~~~~~iv~l  360 (682)
T PHA02876        290 VPKLLERGADVNA---KNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTL------DRNKDIVIT  360 (682)
T ss_pred             HHHHHHCCCCCCC---cCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHh------CCcHHHHHH
Confidence            9999999887543   7899999999999999 59999999999988876443349999999986      334456666


Q ss_pred             hhhccccccccccCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCcccccccCCCcchhHHHHHHHhhhHHHHHHHHHHHH
Q 005556          278 FIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICE  357 (691)
Q Consensus       278 li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~l~~  357 (691)
                      ++.....+...               +                          ....++.+++...++...+++|...  
T Consensus       361 Ll~~gadin~~---------------d--------------------------~~G~TpLh~Aa~~~~~~iv~~Ll~~--  397 (682)
T PHA02876        361 LLELGANVNAR---------------D--------------------------YCDKTPIHYAAVRNNVVIINTLLDY--  397 (682)
T ss_pred             HHHcCCCCccC---------------C--------------------------CCCCCHHHHHHHcCCHHHHHHHHHC--
Confidence            65543322100               0                          1112346778888887777766443  


Q ss_pred             HHHhhhhhhccCCChHHHHHHHcCc-HHHHHHHHHHCCccccccccCCCcHHHHHHhcC-ChhHHHHHhcCCCccccccc
Q 005556          358 NVIWTNRANRNKLKGALFTATRLGI-PEFVNEFIMAYNYSALLLNSQNHGIFELAVLHR-REKVFNLIHGVNSSYFSISL  435 (691)
Q Consensus       358 ~~~~~~~~~~~~g~tpLh~Aa~~G~-~eiv~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~-~~~iv~~Ll~~~~~~~~~n~  435 (691)
                       ..+.+... ..|.||||+|+..++ .++++.|++.+.+ ++.+|..|+||||+|+..+ +.+++++|++.|   +++|.
T Consensus       398 -gad~~~~~-~~g~T~Lh~A~~~~~~~~~vk~Ll~~gad-in~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~G---ad~n~  471 (682)
T PHA02876        398 -GADIEALS-QKIGTALHFALCGTNPYMSVKTLIDRGAN-VNSKNKDLSTPLHYACKKNCKLDVIEMLLDNG---ADVNA  471 (682)
T ss_pred             -CCCccccC-CCCCchHHHHHHcCCHHHHHHHHHhCCCC-CCcCCCCCChHHHHHHHhCCcHHHHHHHHHCC---CCCCC
Confidence             33333333 568899999998766 5678999988876 5789999999999999976 689999999998   99999


Q ss_pred             ccCCCCchhhhhhccCC
Q 005556          436 EDKSGNNILHLTGKSEP  452 (691)
Q Consensus       436 ~D~~G~TpLHlAa~~g~  452 (691)
                      +|..|+||||+|+..+.
T Consensus       472 ~d~~g~tpl~~a~~~~~  488 (682)
T PHA02876        472 INIQNQYPLLIALEYHG  488 (682)
T ss_pred             CCCCCCCHHHHHHHhCC
Confidence            99999999999997653

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=100.00  E-value=1.2e-33  Score=314.74  Aligned_cols=317  Identities=13%  Similarity=0.048  Sum_probs=211.7

Q ss_pred             HcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhc--cCCCCHHHHHHHHhccCCCCCccccccCCCCChHH
Q 005556           76 QMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVE--TDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVL  153 (691)
Q Consensus        76 ~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~--~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpL  153 (691)
                      ..++.+.|+.|++.+...++.+ .+..|.||||.      |+.  .+  +.+++++|++.|   .+  ++.+|..|.|||
T Consensus       151 ~~v~leiVk~LLe~G~ADIN~~-~d~~G~TpLH~------A~~n~~~--~~eIVklLLe~G---AD--VN~kD~~G~TPL  216 (764)
T PHA02716        151 RGIDLDLIKYMVDVGIVNLNYV-CKKTGYGILHA------YLGNMYV--DIDILEWLCNNG---VN--VNLQNNHLITPL  216 (764)
T ss_pred             cCCCHHHHHHHHHCCCCCcccc-cCCCCCcHHHH------HHHhccC--CHHHHHHHHHcC---CC--CCCCCCCCCCHH
Confidence            4689999999999872333443 37789999999      875  46  799999999998   54  788999999999


Q ss_pred             HHHHHcCC--HHHHHHHHHcCchhhhcCCCC-CCcHHHHH-------------------------------------HHc
Q 005556          154 SLCAIRGN--LKASKILVKHKHELLIKQTNQ-NSLPVHLA-------------------------------------ALF  193 (691)
Q Consensus       154 h~Aa~~G~--~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~A-------------------------------------a~~  193 (691)
                      |+|++.|+  .++|++|++.++++.  .++. |.||||+|                                     ++.
T Consensus       217 H~Aa~~g~~~~eIVklLLe~GADVN--~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~  294 (764)
T PHA02716        217 HTYLITGNVCASVIKKIIELGGDMD--MKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARN  294 (764)
T ss_pred             HHHHHcCCCCHHHHHHHHHcCCCCC--CCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHc
Confidence            99999995  599999999999877  7888 99999975                                     345


Q ss_pred             CChHHHHHHHhcCCCCccccccCCCCCcHHHHHHH--cCcHHHHHHHHHhCCCCccCCCCCCCHHHHHHcCCCcc-----
Q 005556          194 GHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIK--ANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAF-----  266 (691)
Q Consensus       194 g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~Ai~--~g~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~~~f-----  266 (691)
                      |+.+++++|++.+++.+   .+|.+|+||||+|+.  .++.+++++|++.+.++......+.||||+|+......     
T Consensus       295 g~leiVklLLe~GAdIN---~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~ld~  371 (764)
T PHA02716        295 IDISVVYSFLQPGVKLH---YKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDP  371 (764)
T ss_pred             CCHHHHHHHHhCCCcee---ccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccccc
Confidence            77788888888877643   378889999998764  45788999999888877654333389999876531110     


Q ss_pred             --ccCCcchhhhhhhhccccccccccCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCcccccccCCCcchhHHH-HHHHh
Q 005556          267 --ESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAI-YAEKL  343 (691)
Q Consensus       267 --~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  343 (691)
                        ....+.++++.|+....++...               +..|.++++.                       .+ .+...
T Consensus       372 ~~~~~~~~eVVklLL~~GADIn~k---------------n~~G~TPLh~-----------------------y~~~a~n~  413 (764)
T PHA02716        372 ETDNDIRLDVIQCLISLGADITAV---------------NCLGYTPLTS-----------------------YICTAQNY  413 (764)
T ss_pred             cccccChHHHHHHHHHCCCCCCCc---------------CCCCCChHHH-----------------------HHHHHHhc
Confidence              0123556677776654332110               1111111110                       00 11222


Q ss_pred             hhHHHHHHHHHHHHHHHhhhh--hh--ccCCChH--HHHHHHcCcHHHHHHHHH------------------HCCccccc
Q 005556          344 THMRTVEIVRFICENVIWTNR--AN--RNKLKGA--LFTATRLGIPEFVNEFIM------------------AYNYSALL  399 (691)
Q Consensus       344 ~~~~~~~lL~~l~~~~~~~~~--~~--~~~g~tp--Lh~Aa~~G~~eiv~~LL~------------------~~~~~~~~  399 (691)
                      ++.+.+++|............  ..  ...+.+|  +|.++..++.++...+.+                  .+. ..+.
T Consensus       414 ~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~-nvN~  492 (764)
T PHA02716        414 MYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERY-NNAV  492 (764)
T ss_pred             ChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhc-cccc
Confidence            344444544322111000000  00  0122333  555555554433322221                  111 2356


Q ss_pred             cccCCCcHHHHHHhcCChh-----HHHHHhcCCCcccccccccCCCCchhhhhhccCCC
Q 005556          400 LNSQNHGIFELAVLHRREK-----VFNLIHGVNSSYFSISLEDKSGNNILHLTGKSEPS  453 (691)
Q Consensus       400 ~d~~G~T~Lh~A~~~~~~~-----iv~~Ll~~~~~~~~~n~~D~~G~TpLHlAa~~g~~  453 (691)
                      +|..|+||||+|+.+|+.+     ++++|++.|   +++|.+|++|+||||+|+++|+.
T Consensus       493 ~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~G---ADIN~~d~~G~TPLh~A~~~g~~  548 (764)
T PHA02716        493 CETSGMTPLHVSIISHTNANIVMDSFVYLLSIQ---YNINIPTKNGVTPLMLTMRNNRL  548 (764)
T ss_pred             cCCCCCCHHHHHHHcCCccchhHHHHHHHHhCC---CCCcccCCCCCCHHHHHHHcCCc
Confidence            7889999999999998874     459999998   99999999999999999999974

>PHA02791 ankyrin-like protein; Provisional

Probab=100.00  E-value=3.9e-33  Score=281.66  Aligned_cols=222  Identities=12%  Similarity=0.036  Sum_probs=182.3

Q ss_pred             cCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCCCCChHHHHH
Q 005556           77 MNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLC  156 (691)
Q Consensus        77 ~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~A  156 (691)
                      .++.+.++.|++.+..   .  .|.+|+||||+      |+..|  +.++++.|++.+   ..  ++.+  +|.||||+|
T Consensus         9 ~~~~~~~~~Lis~~a~---~--~D~~G~TpLh~------Aa~~g--~~eiv~~Ll~~g---a~--~n~~--d~~TpLh~A   68 (284)
T PHA02791          9 WKSKQLKSFLSSKDAF---K--ADVHGHSALYY------AIADN--NVRLVCTLLNAG---AL--KNLL--ENEFPLHQA   68 (284)
T ss_pred             cCHHHHHHHHHhCCCC---C--CCCCCCcHHHH------HHHcC--CHHHHHHHHHCc---CC--CcCC--CCCCHHHHH
Confidence            4566777777765442   3  38889999999      99999  999999999987   32  3333  478999999


Q ss_pred             HHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCCCCccccccCCCC-CcHHHHHHHcCcHHH
Q 005556          157 AIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDG-GRLLSDLIKANLYDV  234 (691)
Q Consensus       157 a~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G-~t~Lh~Ai~~g~~~i  234 (691)
                      +..|+.++|++|++.++++.  .+|. |.||||+||..|+.+++++|++.+++.+.   ++..| .||||+|+..|+.++
T Consensus        69 a~~g~~eiV~lLL~~Gadvn--~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~---~~~~g~~TpL~~Aa~~g~~ei  143 (284)
T PHA02791         69 ATLEDTKIVKILLFSGMDDS--QFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMF---YGKTGWKTSFYHAVMLNDVSI  143 (284)
T ss_pred             HHCCCHHHHHHHHHCCCCCC--CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc---cCCCCCcHHHHHHHHcCCHHH
Confidence            99999999999999888776  7788 99999999999999999999999887543   56666 489999999999999


Q ss_pred             HHHHHHhCCCCccCCCCCCCHHHHHHcCCCccccCCcchhhhhhhhccccccccccCCCCCCCCCCCCCCCCCcccCCCC
Q 005556          235 ALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSK  314 (691)
Q Consensus       235 v~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (691)
                      +++|++++++...   .                                                               
T Consensus       144 vk~LL~~~~~~~d---~---------------------------------------------------------------  157 (284)
T PHA02791        144 VSYFLSEIPSTFD---L---------------------------------------------------------------  157 (284)
T ss_pred             HHHHHhcCCcccc---c---------------------------------------------------------------
Confidence            9999987542210   0                                                               


Q ss_pred             CCCCCCCcccccccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHcCcHHHHHHHHHHCC
Q 005556          315 KSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEFIMAYN  394 (691)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~  394 (691)
                                                                           ..|.||||+|++.|+.++++.|++.++
T Consensus       158 -----------------------------------------------------~~g~TpLh~Aa~~g~~eiv~lLL~~gA  184 (284)
T PHA02791        158 -----------------------------------------------------AILLSCIHITIKNGHVDMMILLLDYMT  184 (284)
T ss_pred             -----------------------------------------------------ccCccHHHHHHHcCCHHHHHHHHHCCC
Confidence                                                                 126899999999999999999999988


Q ss_pred             ccccccccCCCcH-HHHHHhcCChhHHHHHhcCCCcccccccccCCCCchhhhh
Q 005556          395 YSALLLNSQNHGI-FELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHLT  447 (691)
Q Consensus       395 ~~~~~~d~~G~T~-Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~D~~G~TpLHlA  447 (691)
                      + ++.+|..|.|| ||+|+.+|+.+++++|++.|   +++|.+|.+| |||+.|
T Consensus       185 d-~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~G---a~in~~~~~~-~~l~~~  233 (284)
T PHA02791        185 S-TNTNNSLLFIPDIKLAIDNKDLEMLQALFKYD---INIYSVNLEN-VLLDDA  233 (284)
T ss_pred             C-CCcccCCCCChHHHHHHHcCCHHHHHHHHHCC---CCCccCcccC-ccCCCH
Confidence            7 46789999987 99999999999999999998   9999999955 877443

>PHA02874 ankyrin repeat protein; Provisional

Probab=100.00  E-value=1.2e-32  Score=301.07  Aligned_cols=278  Identities=16%  Similarity=0.145  Sum_probs=225.9

Q ss_pred             ccHHHHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCC---------
Q 005556           67 RHLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVD---------  137 (691)
Q Consensus        67 ~~~~L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~---------  137 (691)
                      +.||||.|+..|+.++|+.|++.+.+. +..  +..|.||||.      |+..|  +.+++++|++.|...         
T Consensus        35 ~~tpL~~A~~~g~~~iv~~Ll~~Ga~~-n~~--~~~~~t~L~~------A~~~~--~~~iv~~Ll~~g~~~~~~~~~~~~  103 (434)
T PHA02874         35 TTTPLIDAIRSGDAKIVELFIKHGADI-NHI--NTKIPHPLLT------AIKIG--AHDIIKLLIDNGVDTSILPIPCIE  103 (434)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHCCCCC-CCC--CCCCCCHHHH------HHHcC--CHHHHHHHHHCCCCCCcchhccCC
Confidence            569999999999999999999887654 444  7889999999      99999  999999999987211         


Q ss_pred             ----------CCccccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcC
Q 005556          138 ----------ISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEET  206 (691)
Q Consensus       138 ----------~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~  206 (691)
                                ..+ ++.+|..|.||||+|+..|+.++|++|++.++++.  .++. |.||||+|+..|+.+++++|++.+
T Consensus       104 ~~~i~~ll~~g~d-~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n--~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g  180 (434)
T PHA02874        104 KDMIKTILDCGID-VNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVN--IEDDNGCYPIHIAIKHNFFDIIKLLLEKG  180 (434)
T ss_pred             HHHHHHHHHCcCC-CCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCC--CcCCCCCCHHHHHHHCCcHHHHHHHHHCC
Confidence                      112 56688999999999999999999999999999877  7788 999999999999999999999999


Q ss_pred             CCCccccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCCccCCCCCCCHHHHHHcCCCccccCCcchhhhhhhhcccccc
Q 005556          207 PGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVT  286 (691)
Q Consensus       207 ~~~~~~~~~~~~G~t~Lh~Ai~~g~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~  286 (691)
                      ++.+.   .+..|.||||+|+..|+.+++++|++.+++.......+.||||.|+..+.        ..++.++.      
T Consensus       181 ~~~n~---~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~--------~~i~~Ll~------  243 (434)
T PHA02874        181 AYANV---KDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNR--------SAIELLIN------  243 (434)
T ss_pred             CCCCC---CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCCh--------HHHHHHHc------
Confidence            87543   78999999999999999999999999999876654444999999997531        12222211      


Q ss_pred             ccccCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCcccccccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhh
Q 005556          287 KQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRAN  366 (691)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~~~~  366 (691)
                                                                                              ..+.+..+
T Consensus       244 ------------------------------------------------------------------------~~~in~~d  251 (434)
T PHA02874        244 ------------------------------------------------------------------------NASINDQD  251 (434)
T ss_pred             ------------------------------------------------------------------------CCCCCCcC
Confidence                                                                                    11112111


Q ss_pred             ccCCChHHHHHHHcC-cHHHHHHHHHHCCccccccccCCCcHHHHHHhcC-ChhHHHHHhcCCCcccccccccCCC-Cch
Q 005556          367 RNKLKGALFTATRLG-IPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHR-REKVFNLIHGVNSSYFSISLEDKSG-NNI  443 (691)
Q Consensus       367 ~~~g~tpLh~Aa~~G-~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~-~~~iv~~Ll~~~~~~~~~n~~D~~G-~Tp  443 (691)
                       ..|+||||+|+..+ +.++++.|++.+++ ++.+|..|+||||+|++++ +.++++.|+..+   ..++..+..+ .++
T Consensus       252 -~~G~TpLh~A~~~~~~~~iv~~Ll~~gad-~n~~d~~g~TpL~~A~~~~~~~~~ik~ll~~~---~~~~~~~~~~~~~~  326 (434)
T PHA02874        252 -IDGSTPLHHAINPPCDIDIIDILLYHKAD-ISIKDNKGENPIDTAFKYINKDPVIKDIIANA---VLIKEADKLKDSDF  326 (434)
T ss_pred             -CCCCCHHHHHHhcCCcHHHHHHHHHCcCC-CCCCCCCCCCHHHHHHHhCCccHHHHHHHHhc---CchhhccccchhHH
Confidence             46899999999976 89999999999888 4688999999999999987 778999999986   5666666555 455


Q ss_pred             hhhhhccCC
Q 005556          444 LHLTGKSEP  452 (691)
Q Consensus       444 LHlAa~~g~  452 (691)
                      +..+....+
T Consensus       327 ~~~~~i~~~  335 (434)
T PHA02874        327 LEHIEIKDN  335 (434)
T ss_pred             HHHHHHhcc
Confidence            666554443

>PHA03100 ankyrin repeat protein; Provisional

Probab=100.00  E-value=7.5e-33  Score=307.54  Aligned_cols=267  Identities=14%  Similarity=0.129  Sum_probs=225.1

Q ss_pred             CCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCCCCChHHHH--
Q 005556           78 NDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSL--  155 (691)
Q Consensus        78 G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~--  155 (691)
                      ...+.++.+++.+ +.....  +..+.||||.      |+..|  +.++|+.|++.|   ..  ++..+..|.||||+  
T Consensus        13 ~~~~~~~~~~~~~-~~~~~~--~~~~~t~L~~------A~~~~--~~~ivk~Ll~~g---~~--~~~~~~~~~t~L~~~~   76 (480)
T PHA03100         13 IKVKNIKYIIMED-DLNDYS--YKKPVLPLYL------AKEAR--NIDVVKILLDNG---AD--INSSTKNNSTPLHYLS   76 (480)
T ss_pred             HHHHHHHHHHhcC-ccchhh--hcccchhhhh------hhccC--CHHHHHHHHHcC---CC--CCCccccCcCHHHHHH
Confidence            3445666666543 333333  7789999999      99999  999999999998   44  56788999999999  


Q ss_pred             ---HHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHH--HcCChHHHHHHHhcCCCCccccccCCCCCcHHHHHHHc
Q 005556          156 ---CAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAA--LFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKA  229 (691)
Q Consensus       156 ---Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa--~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~Ai~~  229 (691)
                         |+..|+.+++++|++.++++.  ..+. |.||||+|+  ..|+.+++++|++.+++...   .+..|.||||+|+..
T Consensus        77 ~~~a~~~~~~~iv~~Ll~~ga~i~--~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~---~~~~g~t~L~~A~~~  151 (480)
T PHA03100         77 NIKYNLTDVKEIVKLLLEYGANVN--APDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNI---KNSDGENLLHLYLES  151 (480)
T ss_pred             HHHHHhhchHHHHHHHHHCCCCCC--CCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCc---cCCCCCcHHHHHHHc
Confidence               999999999999999999886  7778 999999999  99999999999999987543   789999999999999


Q ss_pred             C--cHHHHHHHHHhCCCCccCCCCCCCHHHHHHcCCCccccCCcchhhhhhhhccccccccccCCCCCCCCCCCCCCCCC
Q 005556          230 N--LYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIG  307 (691)
Q Consensus       230 g--~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~  307 (691)
                      |  +.++++.|+++++++......+.||||+|+..+       +.++++.++.....+                      
T Consensus       152 ~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~-------~~~iv~~Ll~~ga~~----------------------  202 (480)
T PHA03100        152 NKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKG-------NIDVIKFLLDNGADI----------------------  202 (480)
T ss_pred             CCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhC-------CHHHHHHHHHcCCCc----------------------
Confidence            9  999999999999988765443499999999964       445666665533211                      


Q ss_pred             cccCCCCCCCCCCCcccccccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhccCC------ChHHHHHHHcC
Q 005556          308 TTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKL------KGALFTATRLG  381 (691)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g------~tpLh~Aa~~G  381 (691)
                                                                             +... ..|      .||||.|+..|
T Consensus       203 -------------------------------------------------------~~~~-~~~~~~~~~~t~l~~a~~~~  226 (480)
T PHA03100        203 -------------------------------------------------------NAGD-IETLLFTIFETPLHIAACYN  226 (480)
T ss_pred             -------------------------------------------------------cCCC-CCCCcHHHHHhHHHHHHHhC
Confidence                                                                   1111 123      79999999999


Q ss_pred             c--HHHHHHHHHHCCccccccccCCCcHHHHHHhcCChhHHHHHhcCCCcccccccccCCCCchhhhhhccCCCC
Q 005556          382 I--PEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHLTGKSEPSR  454 (691)
Q Consensus       382 ~--~eiv~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~D~~G~TpLHlAa~~g~~~  454 (691)
                      +  .++++.|++.+.+ ++.+|..|+||||+|+.+|+.+++++|++.|   +++|.+|.+|+||||+|++.++.+
T Consensus       227 ~~~~~iv~~Ll~~g~d-in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~g---ad~n~~d~~g~tpl~~A~~~~~~~  297 (480)
T PHA03100        227 EITLEVVNYLLSYGVP-INIKDVYGFTPLHYAVYNNNPEFVKYLLDLG---ANPNLVNKYGDTPLHIAILNNNKE  297 (480)
T ss_pred             cCcHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCCccCCCCCcHHHHHHHhCCHH
Confidence            9  9999999999876 5688999999999999999999999999998   899999999999999999998853

>PHA02730 ankyrin-like protein; Provisional

Probab=100.00  E-value=3e-32  Score=297.73  Aligned_cols=382  Identities=12%  Similarity=0.067  Sum_probs=256.0

Q ss_pred             hhccHHHHHHHHcC---CHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCcc
Q 005556           65 YRRHLELYRMIQMN---DWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISET  141 (691)
Q Consensus        65 ~~~~~~L~~Aa~~G---~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~  141 (691)
                      ..+.||||.|+..|   +.++|+.|++.+++ ++.+  |..|+||||+      |+..|..+.++|+.|++.|  ...+ 
T Consensus        39 ~~G~TaLh~A~~~~~~~~~eivklLLs~GAd-in~k--D~~G~TPLh~------Aa~~~~~~~eIv~~Ll~~~--~~~~-  106 (672)
T PHA02730         39 RRGNNALHCYVSNKCDTDIKIVRLLLSRGVE-RLCR--NNEGLTPLGV------YSKRKYVKSQIVHLLISSY--SNAS-  106 (672)
T ss_pred             CCCCcHHHHHHHcCCcCcHHHHHHHHhCCCC-Cccc--CCCCCChHHH------HHHcCCCcHHHHHHHHhcC--CCCC-
Confidence            34789999999997   59999999987665 4566  9999999999      9985511599999999997  1122 


Q ss_pred             ccccCCCCChHHHHHHH--cCCHHHHHHHHH-cCchhhhcCCC----C-CCcHHHHHHHcCChHHHHHHHhcCCCCccc-
Q 005556          142 LSCKDGGGNTVLSLCAI--RGNLKASKILVK-HKHELLIKQTN----Q-NSLPVHLAALFGHKDTFEYLLEETPGRVEN-  212 (691)
Q Consensus       142 l~~~d~~G~TpLh~Aa~--~G~~~ivk~Ll~-~~~~l~~~~~n----~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~-  212 (691)
                      .+..+..+++|||.++.  .++.++|++|++ .+.++. ...+    . |.+|+++|+..++.|+|++|++++++..-- 
T Consensus       107 ~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~-~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~  185 (672)
T PHA02730        107 NELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPS-KNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYV  185 (672)
T ss_pred             cccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChh-hhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCcccccc
Confidence            45678889999999998  999999999997 444444 3322    4 999999999999999999999999886311 


Q ss_pred             ----cccCCCCCcHHHHHHH------cCcHHHHHHHHHhCCCCccCCCCCCCHHHHHHcCCCccccCCcchhhhhhhhc-
Q 005556          213 ----FYCGGDGGRLLSDLIK------ANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYK-  281 (691)
Q Consensus       213 ----~~~~~~G~t~Lh~Ai~------~g~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~~~f~s~~~l~~~~~li~~-  281 (691)
                          ...+..+.|.||+++.      +++.|++++|+++|++++.....+.||||++....     ..+.++++.|+.. 
T Consensus       186 ~~~~~~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~-----~~~~eiv~~Li~~~  260 (672)
T PHA02730        186 FRSCMYDSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCS-----TIDIEIVKLLIKDV  260 (672)
T ss_pred             cccccccCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC-----cccHHHHHHHHhcc
Confidence                1233444567775554      46789999999999998875444499999633321     2236889988871 


Q ss_pred             --cccccccccCCCCCCCCCCCCCCCCCcccCCCCCCCCC---------------CCcc---ccc----ccCCCc-----
Q 005556          282 --CIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPY---------------GSTQ---QIT----TYDAKW-----  332 (691)
Q Consensus       282 --~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~---~~~----~~~~~~-----  332 (691)
                        |..-.....     +...       |..+--....++.               +...   .+.    ....+.     
T Consensus       261 ~~~~~~~~~~~-----~~~~-------~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~  328 (672)
T PHA02730        261 DTCSVYDDISQ-----PYIR-------GVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYII  328 (672)
T ss_pred             ccccccccccc-----hhhh-------hhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccccccccccchhHH
Confidence              111100000     0000       0000000000000               0000   000    000000     


Q ss_pred             ------------chhHHHHHHHh--hhHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHcCc----HHHHHHHHHHCC
Q 005556          333 ------------PCFKAIYAEKL--THMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGI----PEFVNEFIMAYN  394 (691)
Q Consensus       333 ------------~~~~~~~~~~~--~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~----~eiv~~LL~~~~  394 (691)
                                  .-++.+...-.  ++....++++.+++.+.+++..  ..|.||||.|+..++    .|+++.|+++++
T Consensus       329 ~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~GAdIN~k--~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga  406 (672)
T PHA02730        329 DNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDNGATMDKT--TDNNYPLHDYFVNNNNIVDVNVVRFIVENNG  406 (672)
T ss_pred             HHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHCCCCCCcC--CCCCcHHHHHHHHcCCcchHHHHHHHHHcCC
Confidence                        01111111111  1123345666667777777754  579999999999885    899999999987


Q ss_pred             c-cccccccCCCcHHHH---HHhcC---------ChhHHHHHhcCCCcccccccccCCCCchhhhhhccCCCCCCCchHH
Q 005556          395 Y-SALLLNSQNHGIFEL---AVLHR---------REKVFNLIHGVNSSYFSISLEDKSGNNILHLTGKSEPSRHVPGAAL  461 (691)
Q Consensus       395 ~-~~~~~d~~G~T~Lh~---A~~~~---------~~~iv~~Ll~~~~~~~~~n~~D~~G~TpLHlAa~~g~~~~v~~~al  461 (691)
                      + .++.+|..|+||||.   |...+         ..+++++|+++|   +++|.+|+.|+||||+|+..++.+.      
T Consensus       407 ~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~G---ADINakD~~G~TPLh~Aa~~~~~ei------  477 (672)
T PHA02730        407 HMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYM---DDIDMIDNENKTLLYYAVDVNNIQF------  477 (672)
T ss_pred             CccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcc---cchhccCCCCCCHHHHHHHhCCHHH------
Confidence            4 467889999999994   43332         235799999998   9999999999999999999887321      


Q ss_pred             hhHHHHHHHHhhhhcC-CchhHHHhhh-cCCCchhhhhH
Q 005556          462 KMQRELQWFKLAKNLV-HPQFREAENK-LEQTPTEVFTK  498 (691)
Q Consensus       462 ~~~~el~~~~~v~~~~-~~~~~~~~N~-~G~Tp~di~~~  498 (691)
                                 ++.++ ....++.+|+ .|+||++.+..
T Consensus       478 -----------ve~LI~~GAdIN~~d~~~g~TaL~~Aa~  505 (672)
T PHA02730        478 -----------ARRLLEYGASVNTTSRSIINTAIQKSSY  505 (672)
T ss_pred             -----------HHHHHHCCCCCCCCCCcCCcCHHHHHHH
Confidence                       11111 3345788886 59999998765

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=100.00  E-value=3.9e-32  Score=302.69  Aligned_cols=324  Identities=11%  Similarity=0.003  Sum_probs=224.3

Q ss_pred             hhccHHHHHHHH--cCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCH--HHHHHHHhccCCCCCc
Q 005556           65 YRRHLELYRMIQ--MNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEAT--DLIDKLAQSTDVDISE  140 (691)
Q Consensus        65 ~~~~~~L~~Aa~--~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~--~iv~~Ll~~~~~~~~~  140 (691)
                      ..+.||||.|+.  .|+.++++.|++.+.+ ++.+  |..|.||||+      |+..|  +.  ++|+.|+++|   ++ 
T Consensus       175 ~~G~TpLH~A~~n~~~~~eIVklLLe~GAD-VN~k--D~~G~TPLH~------Aa~~g--~~~~eIVklLLe~G---AD-  239 (764)
T PHA02716        175 KTGYGILHAYLGNMYVDIDILEWLCNNGVN-VNLQ--NNHLITPLHT------YLITG--NVCASVIKKIIELG---GD-  239 (764)
T ss_pred             CCCCcHHHHHHHhccCCHHHHHHHHHcCCC-CCCC--CCCCCCHHHH------HHHcC--CCCHHHHHHHHHcC---CC-
Confidence            447899998864  4678999999988655 4555  8899999999      99999  74  8999999998   54 


Q ss_pred             cccccCCCCChHHHHH-------------------------------------HHcCCHHHHHHHHHcCchhhhcCCCC-
Q 005556          141 TLSCKDGGGNTVLSLC-------------------------------------AIRGNLKASKILVKHKHELLIKQTNQ-  182 (691)
Q Consensus       141 ~l~~~d~~G~TpLh~A-------------------------------------a~~G~~~ivk~Ll~~~~~l~~~~~n~-  182 (691)
                       ++.+|..|+||||+|                                     |+.|+.+++++|++.++++.  .++. 
T Consensus       240 -VN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN--~kD~~  316 (764)
T PHA02716        240 -MDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLH--YKDSA  316 (764)
T ss_pred             -CCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCcee--ccCCC
Confidence             788999999999975                                     45688999999999999876  7788 


Q ss_pred             CCcHHHHHHH--cCChHHHHHHHhcCCCCccccccCCCCCcHHHHHHH--------------cCcHHHHHHHHHhCCCCc
Q 005556          183 NSLPVHLAAL--FGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIK--------------ANLYDVALNLLKNHPEIV  246 (691)
Q Consensus       183 G~TpLh~Aa~--~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~Ai~--------------~g~~~iv~~Ll~~~~~~~  246 (691)
                      |+||||+|+.  .++.+++++|++.+++.+.   +|..|.||||+|+.              .++.++++.|+++++++.
T Consensus       317 G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~---kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn  393 (764)
T PHA02716        317 GRTCLHQYILRHNISTDIIKLLHEYGNDLNE---PDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADIT  393 (764)
T ss_pred             CCCHHHHHHHHhCCCchHHHHHHHcCCCCcc---CCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCC
Confidence            9999999874  4689999999999987543   79999999999875              368999999999999887


Q ss_pred             cCCCCCCCHHHHHHcCCCccccCCcchhhhhhhhccccccccccCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCccccc
Q 005556          247 HDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQIT  326 (691)
Q Consensus       247 ~~~d~~~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (691)
                      ...+.+.||||.++....   .....++++.|+.........  .... .......    +                   
T Consensus       394 ~kn~~G~TPLh~y~~~a~---n~~~~dIvklLis~~~~~~~~--~~~~-q~ll~~~----d-------------------  444 (764)
T PHA02716        394 AVNCLGYTPLTSYICTAQ---NYMYYDIIDCLISDKVLNMVK--HRIL-QDLLIRV----D-------------------  444 (764)
T ss_pred             CcCCCCCChHHHHHHHHH---hcChHHHHHHHHhCcchhhhh--hhhh-hhhhhcc----C-------------------
Confidence            755444999994322100   023456777776642110000  0000 0000000    0                   


Q ss_pred             ccCCCcchhHHHHHHHhhhH--------------HHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHcCcH-----HHHH
Q 005556          327 TYDAKWPCFKAIYAEKLTHM--------------RTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIP-----EFVN  387 (691)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~--------------~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~-----eiv~  387 (691)
                          ..+.+.+...++.+..              ....+.........+.+..+ ..|+||||+|+..|+.     |+++
T Consensus       445 ----~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D-~~G~TPLh~Aa~~g~~~~v~~e~~k  519 (764)
T PHA02716        445 ----DTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCE-TSGMTPLHVSIISHTNANIVMDSFV  519 (764)
T ss_pred             ----cchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhccccccC-CCCCCHHHHHHHcCCccchhHHHHH
Confidence                0000000000000000              00001111111111222222 5699999999999987     4559


Q ss_pred             HHHHHCCccccccccCCCcHHHHHHhcCCh-----hHHHHHhcCCCcccccccccCCCCchhhhhhccCCC
Q 005556          388 EFIMAYNYSALLLNSQNHGIFELAVLHRRE-----KVFNLIHGVNSSYFSISLEDKSGNNILHLTGKSEPS  453 (691)
Q Consensus       388 ~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~-----~iv~~Ll~~~~~~~~~n~~D~~G~TpLHlAa~~g~~  453 (691)
                      +|++.+++ ++.+|++|+||||+|+++|+.     ++|++|++.+   ++++..      .|++|...++.
T Consensus       520 ~LL~~GAD-IN~~d~~G~TPLh~A~~~g~~~~~~~eIvk~LL~~g---a~~~~~------~l~~~~~~~~~  580 (764)
T PHA02716        520 YLLSIQYN-INIPTKNGVTPLMLTMRNNRLSGHQWYIVKNILDKR---PNVDIV------IIFLDKCYANG  580 (764)
T ss_pred             HHHhCCCC-CcccCCCCCCHHHHHHHcCCccccHHHHHHHHHhcC---CCcchH------HHHHHhhhhhh
Confidence            99999877 568999999999999999977     9999999997   555555      37888866653

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=3.2e-33  Score=246.19  Aligned_cols=207  Identities=18%  Similarity=0.162  Sum_probs=177.6

Q ss_pred             CcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCC-CCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCC
Q 005556          103 SLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDG-GGNTVLSLCAIRGNLKASKILVKHKHELLIKQTN  181 (691)
Q Consensus       103 g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~-~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n  181 (691)
                      +.++.+.      +|...  ...-|+.+++..   +.. ++.+|. +|+||||+||..|+.++|++|+. .+++.++.+|
T Consensus         3 ~~~~~~~------~~~~~--~~~kveel~~s~---~kS-L~~r~dqD~Rt~LHwa~S~g~~eiv~fLls-q~nv~~ddkD   69 (226)
T KOG4412|consen    3 YASLGKA------ICENC--EEFKVEELIQSD---PKS-LNARDDQDGRTPLHWACSFGHVEIVYFLLS-QPNVKPDDKD   69 (226)
T ss_pred             ccchHHH------HHhhc--hHHHHHHHHhcC---hhh-hhccccccCCceeeeeeecCchhHHHHHHh-cCCCCCCCcc
Confidence            4567777      88888  888899999886   655 666666 99999999999999999999997 4444335777


Q ss_pred             C-CCcHHHHHHHcCChHHHHHHHhc-CCCCccccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCCccCCCCCCCHHHHH
Q 005556          182 Q-NSLPVHLAALFGHKDTFEYLLEE-TPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSL  259 (691)
Q Consensus       182 ~-G~TpLh~Aa~~g~~~iv~~Ll~~-~~~~~~~~~~~~~G~t~Lh~Ai~~g~~~iv~~Ll~~~~~~~~~~d~~~TpLh~A  259 (691)
                      . |+||||.||..|+.|+|+.|+.+ +++.+   ..++.|.|+||+|+..|+++++++|+++++.+.. .|         
T Consensus        70 daGWtPlhia~s~g~~evVk~Ll~r~~advn---a~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~-kD---------  136 (226)
T KOG4412|consen   70 DAGWTPLHIAASNGNDEVVKELLNRSGADVN---ATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRI-KD---------  136 (226)
T ss_pred             ccCCchhhhhhhcCcHHHHHHHhcCCCCCcc---eecCCCcceehhhhcCChhhHHHHHHhcCCCCcc-cc---------
Confidence            8 99999999999999999999999 55543   4799999999999999999999999999754432 11         


Q ss_pred             HcCCCccccCCcchhhhhhhhccccccccccCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCcccccccCCCcchhHHHH
Q 005556          260 ALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIY  339 (691)
Q Consensus       260 a~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (691)
                                                                                                      
T Consensus       137 --------------------------------------------------------------------------------  136 (226)
T KOG4412|consen  137 --------------------------------------------------------------------------------  136 (226)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             HHHhhhHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHcCcHHHHHHHHHHCCccccccccCCCcHHHHHHhcCChhH
Q 005556          340 AEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKV  419 (691)
Q Consensus       340 ~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~i  419 (691)
                                                  ..|.||||.||..|+++++++|+..++ .++..|+.|+||||.|...|+.++
T Consensus       137 ----------------------------~~~qtplHRAAavGklkvie~Li~~~a-~~n~qDk~G~TpL~~al~e~~~d~  187 (226)
T KOG4412|consen  137 ----------------------------KQGQTPLHRAAAVGKLKVIEYLISQGA-PLNTQDKYGFTPLHHALAEGHPDV  187 (226)
T ss_pred             ----------------------------cccCchhHHHHhccchhhHHHHHhcCC-CCCcccccCccHHHHHHhccCchH
Confidence                                        237899999999999999999999884 467899999999999988899999


Q ss_pred             HHHHhcCCCcccccccccCCCCchhhhhh
Q 005556          420 FNLIHGVNSSYFSISLEDKSGNNILHLTG  448 (691)
Q Consensus       420 v~~Ll~~~~~~~~~n~~D~~G~TpLHlAa  448 (691)
                      ..+|++.|   +++...|++| |||-.|+
T Consensus       188 a~lLV~~g---Ad~~~edke~-t~~~~a~  212 (226)
T KOG4412|consen  188 AVLLVRAG---ADTDREDKEG-TALRIAC  212 (226)
T ss_pred             HHHHHHhc---cceeeccccC-chHHHHH
Confidence            99999998   9999999999 9988776

>PHA02917 ankyrin-like protein; Provisional

Probab=100.00  E-value=7.3e-32  Score=303.15  Aligned_cols=371  Identities=12%  Similarity=-0.017  Sum_probs=246.3

Q ss_pred             hhhccHHHHHHHHc---CCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHH----HHHHHHhccCC
Q 005556           64 KYRRHLELYRMIQM---NDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATD----LIDKLAQSTDV  136 (691)
Q Consensus        64 ~~~~~~~L~~Aa~~---G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~----iv~~Ll~~~~~  136 (691)
                      +..+.||||.|+..   |+.+.|+.|++.+.+. +.+  +..|+||||.      |+..|  +.+    +++.|++.+  
T Consensus        29 d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v-~~~--~~~g~TpL~~------Aa~~g--~~~v~~~~~~~Ll~~~--   95 (661)
T PHA02917         29 NQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNP-LHK--NWRQLTPLEE------YTNSR--HVKVNKDIAMALLEAT--   95 (661)
T ss_pred             CCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCc-ccc--CCCCCCHHHH------HHHcC--ChhHHHHHHHHHHhcc--
Confidence            44578999997555   8899999999886654 455  8999999999      99999  955    557777764  


Q ss_pred             CCCccccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHH--HcCChHHHHHHHhcCCCCcccc
Q 005556          137 DISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAA--LFGHKDTFEYLLEETPGRVENF  213 (691)
Q Consensus       137 ~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa--~~g~~~iv~~Ll~~~~~~~~~~  213 (691)
                       ..  .+..+  ..+++|.|+..|+.++|++|++++.++.  .++. |.||||.|+  ..|+.+++++|+++|++.....
T Consensus        96 -~~--~n~~~--~~~~~~~a~~~~~~e~vk~Ll~~Gadin--~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d  168 (661)
T PHA02917         96 -GY--SNIND--FNIFSYMKSKNVDVDLIKVLVEHGFDLS--VKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYED  168 (661)
T ss_pred             -CC--CCCCC--cchHHHHHhhcCCHHHHHHHHHcCCCCC--ccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccc
Confidence             11  12222  3477888999999999999999999987  7788 999999654  5789999999999998864322


Q ss_pred             ccCCCC-----------CcHHHHHHH-----------cCcHHHHHHHHHhCCCCccCCCCCCCHHHHHHcCCCccccCCc
Q 005556          214 YCGGDG-----------GRLLSDLIK-----------ANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSR  271 (691)
Q Consensus       214 ~~~~~G-----------~t~Lh~Ai~-----------~g~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~~~f~s~~~  271 (691)
                      ..+..|           .||||+|+.           .++.+++++|++.+.++......+.||||+|+..+.     ..
T Consensus       169 ~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~-----~~  243 (661)
T PHA02917        169 EDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSH-----ID  243 (661)
T ss_pred             cccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCC-----Cc
Confidence            233334           699999986           468999999999999988754444999999999752     12


Q ss_pred             chhhhhhhhccccccccccCCCCCCCCCCCCCCCCCcccCCCCC----------CCCCCCcccccccC------------
Q 005556          272 LGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKK----------SIPYGSTQQITTYD------------  329 (691)
Q Consensus       272 l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~------------  329 (691)
                      .++++.|+. ...+...           .+.++..+.++++.+.          .......+.+.+.+            
T Consensus       244 ~eivk~Li~-g~d~~~~-----------~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~~~~~~~~~~~  311 (661)
T PHA02917        244 IDIVKLLMK-GIDNTAY-----------SYIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKPHGIMCSIVPL  311 (661)
T ss_pred             HHHHHHHHh-CCccccc-----------ccccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCCCceeEeeecc
Confidence            468888875 3222100           0111111111111000          00000000000000            


Q ss_pred             --CCcchhHHHHH--------------HHhhhHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHcCcHHHHHHHHHH-
Q 005556          330 --AKWPCFKAIYA--------------EKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEFIMA-  392 (691)
Q Consensus       330 --~~~~~~~~~~~--------------~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~-  392 (691)
                        .....++.+.+              ...+.. ..++++.+++.+.+++... ..|.++.    ...+.++++.||.. 
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~-~~~~v~~Ll~~GAdvn~~~-~~g~~~~----~~~~~~~i~~LL~~~  385 (661)
T PHA02917        312 WRNDKETISLILKTMNSDVLQHILIEYMTFGDI-DIPLVECMLEYGAVVNKEA-IHGYFRN----INIDSYTMKYLLKKE  385 (661)
T ss_pred             cccchHHHHHHHHHhchHHHHHHHHHHHHcCCC-cHHHHHHHHHcCCCCCCCC-ccccchh----hcCCHHHHHHHHHhc
Confidence              01011111111              111111 2346666677777666544 4466533    46678899999975 


Q ss_pred             CCccccccccCCCcHHHHHHhcCC-----------------------hhHHHHHhcCCCcccccccccCCCCchhhhhhc
Q 005556          393 YNYSALLLNSQNHGIFELAVLHRR-----------------------EKVFNLIHGVNSSYFSISLEDKSGNNILHLTGK  449 (691)
Q Consensus       393 ~~~~~~~~d~~G~T~Lh~A~~~~~-----------------------~~iv~~Ll~~~~~~~~~n~~D~~G~TpLHlAa~  449 (691)
                      +++.. ..|.+|+||||.|+++++                       .+++++|+++|   +++|.+|..|+||||+|+.
T Consensus       386 ga~~~-~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~G---AdIN~kd~~G~TpLh~Aa~  461 (661)
T PHA02917        386 GGDAV-NHLDDGEIPIGHLCKSNYGCYNFYTYTYKKGLCDMSYACPILSTINICLPYL---KDINMIDKRGETLLHKAVR  461 (661)
T ss_pred             CCCcc-ccCCCCCChhHHHHHhcccchhhhhhhhhhccchhhhhhhhHHHHHHHHHCC---CCCCCCCCCCcCHHHHHHH
Confidence            55544 446679999999985433                       46789999998   9999999999999999998


Q ss_pred             cCCCCCCCchHHhhHHHHHHHHhhhhcC-CchhHHHhhhcCCCchhhhhH
Q 005556          450 SEPSRHVPGAALKMQRELQWFKLAKNLV-HPQFREAENKLEQTPTEVFTK  498 (691)
Q Consensus       450 ~g~~~~v~~~al~~~~el~~~~~v~~~~-~~~~~~~~N~~G~Tp~di~~~  498 (691)
                      .++.+                 .++.++ ...+++.+|..|+||+.++..
T Consensus       462 ~~~~~-----------------~v~~Ll~~GAdin~~d~~G~T~L~~A~~  494 (661)
T PHA02917        462 YNKQS-----------------LVSLLLESGSDVNIRSNNGYTCIAIAIN  494 (661)
T ss_pred             cCCHH-----------------HHHHHHHCcCCCCCCCCCCCCHHHHHHH
Confidence            87621                 122222 234578899999999999874

>PHA03100 ankyrin repeat protein; Provisional

Probab=100.00  E-value=4.3e-32  Score=301.46  Aligned_cols=274  Identities=17%  Similarity=0.109  Sum_probs=226.5

Q ss_pred             hhhhhccHHHHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCcc
Q 005556           62 HEKYRRHLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISET  141 (691)
Q Consensus        62 ~~~~~~~~~L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~  141 (691)
                      ..+..+.+|||.|+..|+.+.|+.|++.+.+. +..  +..|.||||++ ....|+..|  +.++++.|++.|   +.  
T Consensus        30 ~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~-~~~--~~~~~t~L~~~-~~~~a~~~~--~~~iv~~Ll~~g---a~--   98 (480)
T PHA03100         30 YSYKKPVLPLYLAKEARNIDVVKILLDNGADI-NSS--TKNNSTPLHYL-SNIKYNLTD--VKEIVKLLLEYG---AN--   98 (480)
T ss_pred             hhhcccchhhhhhhccCCHHHHHHHHHcCCCC-CCc--cccCcCHHHHH-HHHHHHhhc--hHHHHHHHHHCC---CC--
Confidence            34455789999999999999999999987653 444  77889999861 111267888  999999999998   54  


Q ss_pred             ccccCCCCChHHHHHH--HcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcC--ChHHHHHHHhcCCCCccccccC
Q 005556          142 LSCKDGGGNTVLSLCA--IRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFG--HKDTFEYLLEETPGRVENFYCG  216 (691)
Q Consensus       142 l~~~d~~G~TpLh~Aa--~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g--~~~iv~~Ll~~~~~~~~~~~~~  216 (691)
                      ++..|..|.||||+|+  ..|+.+++++|++.++++.  ..+. |.||||+|+..|  +.+++++|++.+++.+.   ++
T Consensus        99 i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~---~d  173 (480)
T PHA03100         99 VNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVN--IKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINA---KN  173 (480)
T ss_pred             CCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCC--ccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCccc---cc
Confidence            5789999999999999  9999999999999998876  7788 999999999999  99999999999988544   67


Q ss_pred             CCCCcHHHHHHHcCcHHHHHHHHHhCCCCccCCCCC------CCHHHHHHcCCCccccCCcchhhhhhhhcccccccccc
Q 005556          217 GDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQ------KMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLS  290 (691)
Q Consensus       217 ~~G~t~Lh~Ai~~g~~~iv~~Ll~~~~~~~~~~d~~------~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~  290 (691)
                      ..|.||||+|+..|+.+++++|++++++.......+      .||||.|+..+.     ...++++.++.          
T Consensus       174 ~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~-----~~~~iv~~Ll~----------  238 (480)
T PHA03100        174 RYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNE-----ITLEVVNYLLS----------  238 (480)
T ss_pred             CCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCc-----CcHHHHHHHHH----------
Confidence            899999999999999999999999999887665555      689999987642     11334443333          


Q ss_pred             CCCCCCCCCCCCCCCCCcccCCCCCCCCCCCcccccccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhccCC
Q 005556          291 QTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKL  370 (691)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g  370 (691)
                                                                                         .+.+++..+ ..|
T Consensus       239 -------------------------------------------------------------------~g~din~~d-~~g  250 (480)
T PHA03100        239 -------------------------------------------------------------------YGVPINIKD-VYG  250 (480)
T ss_pred             -------------------------------------------------------------------cCCCCCCCC-CCC
Confidence                                                                               222223222 568


Q ss_pred             ChHHHHHHHcCcHHHHHHHHHHCCccccccccCCCcHHHHHHhcCChhHHHHHhcCCCcccccccccC
Q 005556          371 KGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDK  438 (691)
Q Consensus       371 ~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~D~  438 (691)
                      .||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+.+++.+++++|++.|   .+++..+.
T Consensus       251 ~TpL~~A~~~~~~~iv~~Ll~~gad-~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g---~~i~~i~~  314 (480)
T PHA03100        251 FTPLHYAVYNNNPEFVKYLLDLGAN-PNLVNKYGDTPLHIAILNNNKEIFKLLLNNG---PSIKTIIE  314 (480)
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCcHHHHHHHhCCHHHHHHHHhcC---CCHHHHHH
Confidence            9999999999999999999999986 5789999999999999999999999999998   66666554

>PHA02875 ankyrin repeat protein; Provisional

Probab=100.00  E-value=8.7e-32  Score=292.79  Aligned_cols=244  Identities=11%  Similarity=0.049  Sum_probs=210.0

Q ss_pred             ccHHHHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccC
Q 005556           67 RHLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKD  146 (691)
Q Consensus        67 ~~~~L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d  146 (691)
                      ..++|+.|+..|+.+.++.|++.+.+. +..  +..|.||||+      |+..|  +.++++.|++.|   ..  .+..+
T Consensus         2 ~~~~L~~A~~~g~~~iv~~Ll~~g~~~-n~~--~~~g~tpL~~------A~~~~--~~~~v~~Ll~~g---a~--~~~~~   65 (413)
T PHA02875          2 DQVALCDAILFGELDIARRLLDIGINP-NFE--IYDGISPIKL------AMKFR--DSEAIKLLMKHG---AI--PDVKY   65 (413)
T ss_pred             CchHHHHHHHhCCHHHHHHHHHCCCCC-Ccc--CCCCCCHHHH------HHHcC--CHHHHHHHHhCC---CC--ccccC
Confidence            358899999999999999999886543 344  6789999999      99999  999999999998   43  45677


Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCCCCccccccCCCCCcHHHH
Q 005556          147 GGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSD  225 (691)
Q Consensus       147 ~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~  225 (691)
                      ..|.||||+|+..|+.++|++|++.++... ...+. |.||||+|+..|+.+++++|++.+++...   .+.+|.||||+
T Consensus        66 ~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~-~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~---~~~~g~tpLh~  141 (413)
T PHA02875         66 PDIESELHDAVEEGDVKAVEELLDLGKFAD-DVFYKDGMTPLHLATILKKLDIMKLLIARGADPDI---PNTDKFSPLHL  141 (413)
T ss_pred             CCcccHHHHHHHCCCHHHHHHHHHcCCccc-ccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCC---CCCCCCCHHHH
Confidence            889999999999999999999999998877 67777 99999999999999999999999988544   78899999999


Q ss_pred             HHHcCcHHHHHHHHHhCCCCccCCCCCCCHHHHHHcCCCccccCCcchhhhhhhhccccccccccCCCCCCCCCCCCCCC
Q 005556          226 LIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENG  305 (691)
Q Consensus       226 Ai~~g~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~  305 (691)
                      |+..|+.++++.|++++++.... |                                                       
T Consensus       142 A~~~~~~~~v~~Ll~~g~~~~~~-d-------------------------------------------------------  165 (413)
T PHA02875        142 AVMMGDIKGIELLIDHKACLDIE-D-------------------------------------------------------  165 (413)
T ss_pred             HHHcCCHHHHHHHHhcCCCCCCC-C-------------------------------------------------------
Confidence            99999999999999987654321 0                                                       


Q ss_pred             CCcccCCCCCCCCCCCcccccccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHcCcHHH
Q 005556          306 IGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEF  385 (691)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~ei  385 (691)
                                                                                    ..|.||||+|+..|+.++
T Consensus       166 --------------------------------------------------------------~~g~TpL~~A~~~g~~ei  183 (413)
T PHA02875        166 --------------------------------------------------------------CCGCTPLIIAMAKGDIAI  183 (413)
T ss_pred             --------------------------------------------------------------CCCCCHHHHHHHcCCHHH
Confidence                                                                          237999999999999999


Q ss_pred             HHHHHHHCCccccccccCC-CcHHHHHHhcCChhHHHHHhcCCCccccccc---ccCCCCchhhhhhccCC
Q 005556          386 VNEFIMAYNYSALLLNSQN-HGIFELAVLHRREKVFNLIHGVNSSYFSISL---EDKSGNNILHLTGKSEP  452 (691)
Q Consensus       386 v~~LL~~~~~~~~~~d~~G-~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~---~D~~G~TpLHlAa~~g~  452 (691)
                      ++.|++.+++.. ..+..| .||+|+|+.+|+.+++++|+++|   +++|.   .|.+|.|||++++..+.
T Consensus       184 v~~Ll~~ga~~n-~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~g---ad~n~~~~~~~~~~t~l~~~~~~~~  250 (413)
T PHA02875        184 CKMLLDSGANID-YFGKNGCVAALCYAIENNKIDIVRLFIKRG---ADCNIMFMIEGEECTILDMICNMCT  250 (413)
T ss_pred             HHHHHhCCCCCC-cCCCCCCchHHHHHHHcCCHHHHHHHHHCC---cCcchHhhcCCCchHHHHHHHhhcC
Confidence            999999998854 566665 58999999999999999999998   66665   47889999999886543

>PHA03095 ankyrin-like protein; Provisional

Probab=100.00  E-value=6.4e-32  Score=299.44  Aligned_cols=274  Identities=14%  Similarity=0.077  Sum_probs=224.3

Q ss_pred             hccHHHHHHHHcC---CHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCC-HHHHHHHHhccCCCCCcc
Q 005556           66 RRHLELYRMIQMN---DWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEA-TDLIDKLAQSTDVDISET  141 (691)
Q Consensus        66 ~~~~~L~~Aa~~G---~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~-~~iv~~Ll~~~~~~~~~~  141 (691)
                      .+.||||.|+..|   +.+.++.|++.+.+ ++.+  +..|.||||+      |+..|  + .++++.|+++|   .+  
T Consensus        46 ~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gad-in~~--~~~g~TpLh~------A~~~~--~~~~iv~lLl~~g---a~--  109 (471)
T PHA03095         46 YGKTPLHLYLHYSSEKVKDIVRLLLEAGAD-VNAP--ERCGFTPLHL------YLYNA--TTLDVIKLLIKAG---AD--  109 (471)
T ss_pred             CCCCHHHHHHHhcCCChHHHHHHHHHCCCC-CCCC--CCCCCCHHHH------HHHcC--CcHHHHHHHHHcC---CC--
Confidence            4679999999999   99999999988765 4555  7899999999      99999  8 99999999998   54  


Q ss_pred             ccccCCCCChHHHHHH--HcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcC--ChHHHHHHHhcCCCCccccccC
Q 005556          142 LSCKDGGGNTVLSLCA--IRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFG--HKDTFEYLLEETPGRVENFYCG  216 (691)
Q Consensus       142 l~~~d~~G~TpLh~Aa--~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g--~~~iv~~Ll~~~~~~~~~~~~~  216 (691)
                      ++.+|..|+||||+|+  ..++.+++++|++.++++.  ..|. |.||||+|+..+  +.+++++|++.+++...   .|
T Consensus       110 in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~--~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~---~d  184 (471)
T PHA03095        110 VNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVN--ALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYA---VD  184 (471)
T ss_pred             CCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCC--ccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcc---cC
Confidence            7889999999999999  5678999999999999876  7788 999999999876  58999999999987544   58


Q ss_pred             CCCCcHHHHHHHc--CcHHHHHHHHHhCCCCccCCCCCCCHHHHHHcCCCccccCCcchhhhhhhhccccccccccCCCC
Q 005556          217 GDGGRLLSDLIKA--NLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTND  294 (691)
Q Consensus       217 ~~G~t~Lh~Ai~~--g~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~  294 (691)
                      ..|.||||+|+..  ++.++++.|++.+.+.......+.||||+|+..+..     ....++.+                
T Consensus       185 ~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~-----~~~~v~~l----------------  243 (471)
T PHA03095        185 DRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSC-----KRSLVLPL----------------  243 (471)
T ss_pred             CCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCc-----hHHHHHHH----------------
Confidence            9999999999875  788999999999988776544449999999986421     11122222                


Q ss_pred             CCCCCCCCCCCCCcccCCCCCCCCCCCcccccccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhccCCChHH
Q 005556          295 NPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGAL  374 (691)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpL  374 (691)
                                                                                   .+...+++..+ ..|+|||
T Consensus       244 -------------------------------------------------------------l~~g~din~~d-~~g~TpL  261 (471)
T PHA03095        244 -------------------------------------------------------------LIAGISINARN-RYGQTPL  261 (471)
T ss_pred             -------------------------------------------------------------HHcCCCCCCcC-CCCCCHH
Confidence                                                                         22223333333 5689999


Q ss_pred             HHHHHcCcHHHHHHHHHHCCccccccccCCCcHHHHHHhcCChhHHHHHhcCCCcccccccccCCCCchhhhh
Q 005556          375 FTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHLT  447 (691)
Q Consensus       375 h~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~D~~G~TpLHlA  447 (691)
                      |+|+..|+.++++.|++.+++ ++.+|.+|+||||+|+.+|+.++++.|++.+   .+++..+...+++...+
T Consensus       262 h~A~~~~~~~~v~~LL~~gad-~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~---~~~~~~~~~~~~~~~~~  330 (471)
T PHA03095        262 HYAAVFNNPRACRRLIALGAD-INAVSSDGNTPLSLMVRNNNGRAVRAALAKN---PSAETVAATLNTASVAG  330 (471)
T ss_pred             HHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHhCCHHHHHHHHHhC---CCHHHHHHHHHHHhhcc
Confidence            999999999999999999887 4688999999999999999999999999997   66666655444443333

>PHA02878 ankyrin repeat protein; Provisional

Probab=100.00  E-value=1e-31  Score=296.96  Aligned_cols=273  Identities=9%  Similarity=-0.023  Sum_probs=206.2

Q ss_pred             hhccHHHHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccc
Q 005556           65 YRRHLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSC  144 (691)
Q Consensus        65 ~~~~~~L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~  144 (691)
                      ..+.+|||.|+..|+.+.|+.|++.+.+ ++.+  |.+|+||||+      ||..|  +.++++.|++.+   ...    
T Consensus        35 ~~~~tPLh~A~~~g~~e~vk~Ll~~gad-vn~~--d~~g~TpLh~------A~~~g--~~~~v~~Ll~~~---~~~----   96 (477)
T PHA02878         35 LIPFIPLHQAVEARNLDVVKSLLTRGHN-VNQP--DHRDLTPLHI------ICKEP--NKLGMKEMIRSI---NKC----   96 (477)
T ss_pred             ccCcchHHHHHHcCCHHHHHHHHHCCCC-CCCC--CCCCCCHHHH------HHHCc--cHhHHHHHHHHH---hcc----
Confidence            3467899999999999999999887654 3454  8889999999      99999  999999999886   322    


Q ss_pred             cCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCCCCcHHHHHHHc--CChHHHHHHHhcCCCCccccccCCC-CCc
Q 005556          145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALF--GHKDTFEYLLEETPGRVENFYCGGD-GGR  221 (691)
Q Consensus       145 ~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~G~TpLh~Aa~~--g~~~iv~~Ll~~~~~~~~~~~~~~~-G~t  221 (691)
                      ....+.+|||.|+..|+.++++.|+..+.+.. ...  ....+..+...  .+.+++++|++.+++.+.   .+.+ |.|
T Consensus        97 ~~~~~~~~l~~a~~~~~~ei~~~Ll~~~~~~~-~~~--~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~---~~~~~g~t  170 (477)
T PHA02878         97 SVFYTLVAIKDAFNNRNVEIFKIILTNRYKNI-QTI--DLVYIDKKSKDDIIEAEITKLLLSYGADINM---KDRHKGNT  170 (477)
T ss_pred             ccccchhhHHHHHHcCCHHHHHHHHhCcccCc-ccC--cHHHHhhccchhhHHHHHHHHHHHcCCCCCc---cCCCCCCC
Confidence            12567889999999999999999987643221 000  11111111112  234599999999887544   6777 999


Q ss_pred             HHHHHHHcCcHHHHHHHHHhCCCCccCCCCCCCHHHHHHcCCCccccCCcchhhhhhhhccccccccccCCCCCCCCCCC
Q 005556          222 LLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGD  301 (691)
Q Consensus       222 ~Lh~Ai~~g~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~  301 (691)
                      |||+|+..|+.++++.|++.++++......+.||||.|+..+       +.++++.|+..                    
T Consensus       171 pLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~-------~~~iv~~Ll~~--------------------  223 (477)
T PHA02878        171 ALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHY-------NKPIVHILLEN--------------------  223 (477)
T ss_pred             HHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhC-------CHHHHHHHHHc--------------------
Confidence            999999999999999999999987664333499999999863       23444444432                    


Q ss_pred             CCCCCCcccCCCCCCCCCCCcccccccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHc-
Q 005556          302 TENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRL-  380 (691)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~-  380 (691)
                                                                               ..+.+..+ ..|+||||+|+.. 
T Consensus       224 ---------------------------------------------------------ga~in~~d-~~g~TpLh~A~~~~  245 (477)
T PHA02878        224 ---------------------------------------------------------GASTDARD-KCGNTPLHISVGYC  245 (477)
T ss_pred             ---------------------------------------------------------CCCCCCCC-CCCCCHHHHHHHhc
Confidence                                                                     22222222 5689999999976 


Q ss_pred             CcHHHHHHHHHHCCccccccc-cCCCcHHHHHHhcCChhHHHHHhcCCCcccccccccCCCCchhhhhhccCC
Q 005556          381 GIPEFVNEFIMAYNYSALLLN-SQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHLTGKSEP  452 (691)
Q Consensus       381 G~~eiv~~LL~~~~~~~~~~d-~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~D~~G~TpLHlAa~~g~  452 (691)
                      ++.++++.|++.+++.. .++ ..|+||||+|  .++.+++++|++.|   +++|.+|.+|+||||+|++.+.
T Consensus       246 ~~~~iv~~Ll~~gadvn-~~~~~~g~TpLh~A--~~~~~~v~~Ll~~g---adin~~d~~g~TpL~~A~~~~~  312 (477)
T PHA02878        246 KDYDILKLLLEHGVDVN-AKSYILGLTALHSS--IKSERKLKLLLEYG---ADINSLNSYKLTPLSSAVKQYL  312 (477)
T ss_pred             CCHHHHHHHHHcCCCCC-ccCCCCCCCHHHHH--ccCHHHHHHHHHCC---CCCCCcCCCCCCHHHHHHHHcC
Confidence            79999999999998854 555 4899999999  56789999999998   9999999999999999998543

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=2.1e-32  Score=309.45  Aligned_cols=380  Identities=17%  Similarity=0.071  Sum_probs=263.5

Q ss_pred             hhhhhccHHHHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCC-----
Q 005556           62 HEKYRRHLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDV-----  136 (691)
Q Consensus        62 ~~~~~~~~~L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~-----  136 (691)
                      ..+..+.+|||.|+..|+.+++..++.++... +.  .+..|.||||.      ||..+  ..+++++|++.|.+     
T Consensus       237 a~d~~gl~~lh~a~~~g~~~i~~~l~~~ga~~-~~--~~vr~~tplh~------AA~~~--~~e~~~~ll~~ga~~~~~~  305 (1143)
T KOG4177|consen  237 AKDESGLTPLHVAAFMGHLDIVKLLLQHGASV-NV--STVRGETPLHM------AARAG--QVEVCKLLLQNGADVLAKA  305 (1143)
T ss_pred             cccccCccHHHHHHhccchhHHHHHHhccccc-Cc--ccccccCcchh------hhccc--hhhhHhhhhccCccccccc
Confidence            44556889999999999999999999886554 23  37789999999      99999  89999998888710     


Q ss_pred             ------------------------CCCccccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHH
Q 005556          137 ------------------------DISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAA  191 (691)
Q Consensus       137 ------------------------~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa  191 (691)
                                              ... ..+..+..|.||||+|+..|+.+++.++.+.++.-.  .... |.||+|+|+
T Consensus       306 ~~~kt~l~~a~~~g~~~i~~~~l~~~~-~~~aar~~g~t~lHlaa~~~~~~~~~~l~~~~~~~~--~a~~k~~~pl~la~  382 (1143)
T KOG4177|consen  306 RDDQTPLHIASRLGHEEIVHLLLQAGA-TPNAARTAGYTPLHLAAKEGQVEVAGALLEHGAQRR--QAEEKGFTPLHLAV  382 (1143)
T ss_pred             ccccChhhhhcccchHHHHHHHhhccC-CccccCcCCcccccHhhhhhhHHHHHHhhccccccC--cccccCCcchhhhc
Confidence                                    001 145567788888888888888888887877777665  4555 999999999


Q ss_pred             HcCChHHHHHHHhcCCCCccccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCCccCCCCCCCHHHHHHcCCCccccCCc
Q 005556          192 LFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSR  271 (691)
Q Consensus       192 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~Ai~~g~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~~~f~s~~~  271 (691)
                      ..|+.+++++++..+.+.+.   .+++|.||||.|...++.++++.+++++++.......+.||+|.|+..+.      .
T Consensus       383 ~~g~~~~v~Lll~~ga~~~~---~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~g~------~  453 (1143)
T KOG4177|consen  383 KSGRVSVVELLLEAGADPNS---AGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKKGR------Y  453 (1143)
T ss_pred             ccCchhHHHhhhhccCCccc---CCCCCcceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhhhhhccc------H
Confidence            99999999999999888443   78888999999998888888888888877766543333888998888752      1


Q ss_pred             chhhhhhhhccccccccccCCCCCCCCCCCCCCCCCcccCCCCCCCC-CCCcccccccC-----C-CcchhHHHHHHHhh
Q 005556          272 LGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIP-YGSTQQITTYD-----A-KWPCFKAIYAEKLT  344 (691)
Q Consensus       272 l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~-~~~~~~~~~~~~~~  344 (691)
                      ......+.....++               ......|.++++.+.+.. ......+....     . ...-.....+...+
T Consensus       454 ~~~~~~l~~~g~~~---------------n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~  518 (1143)
T KOG4177|consen  454 LQIARLLLQYGADP---------------NAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADED  518 (1143)
T ss_pred             hhhhhhHhhcCCCc---------------chhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhh
Confidence            12111122211111               111223455555544432 00000011000     0 00111222333344


Q ss_pred             hHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHcCcHHHHHHHHHHCCccccccccCCCcHHHHHHhcCChhHHHHHh
Q 005556          345 HMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIH  424 (691)
Q Consensus       345 ~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll  424 (691)
                      +..+..+   +.+.....+... ..|+||||.||.+|+.++|++||+++.+. +.+|+.|+||||.|+..|+.+|+.+|+
T Consensus       519 ~v~~~~~---l~~~ga~v~~~~-~r~~TpLh~A~~~g~v~~VkfLLe~gAdv-~ak~~~G~TPLH~Aa~~G~~~i~~LLl  593 (1143)
T KOG4177|consen  519 TVKVAKI---LLEHGANVDLRT-GRGYTPLHVAVHYGNVDLVKFLLEHGADV-NAKDKLGYTPLHQAAQQGHNDIAELLL  593 (1143)
T ss_pred             hHHHHHH---HhhcCCceehhc-ccccchHHHHHhcCCchHHHHhhhCCccc-cccCCCCCChhhHHHHcChHHHHHHHH
Confidence            4443333   333333433333 67899999999999999999999999885 578899999999999999999999999


Q ss_pred             cCCCcccccccccCCCCchhhhhhccCCCCCCCchHHhhHHHHHHHHhhhhcCCchhHHHhhhcCCCchhhhhH
Q 005556          425 GVNSSYFSISLEDKSGNNILHLTGKSEPSRHVPGAALKMQRELQWFKLAKNLVHPQFREAENKLEQTPTEVFTK  498 (691)
Q Consensus       425 ~~~~~~~~~n~~D~~G~TpLHlAa~~g~~~~v~~~al~~~~el~~~~~v~~~~~~~~~~~~N~~G~Tp~di~~~  498 (691)
                      ++|   +++|+.|.+|.||||+|+..|+..++.....           +-...........|..|.||.++.++
T Consensus       594 k~G---A~vna~d~~g~TpL~iA~~lg~~~~~k~l~~-----------~~~~~~~~~~~~e~~~g~~p~~v~e~  653 (1143)
T KOG4177|consen  594 KHG---ASVNAADLDGFTPLHIAVRLGYLSVVKLLKV-----------VTATPAATDPVKENRKGAVPEDVAEE  653 (1143)
T ss_pred             HcC---CCCCcccccCcchhHHHHHhcccchhhHHHh-----------ccCccccccchhhhhcccChhhHHHH
Confidence            998   9999999999999999999999755531110           00000111255678889999988654

>PHA02791 ankyrin-like protein; Provisional

Probab=99.98  E-value=1.3e-31  Score=270.64  Aligned_cols=220  Identities=12%  Similarity=0.046  Sum_probs=184.2

Q ss_pred             CHHHHHHHHhccCCCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCCCCcHHHHHHHcCChHHHHHH
Q 005556          123 ATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYL  202 (691)
Q Consensus       123 ~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~G~TpLh~Aa~~g~~~iv~~L  202 (691)
                      +.+++++|++++   +    +.+|.+|.||||+|+..|+.+++++|++.+++..  ..+ |+||||+|+..|+.+++++|
T Consensus        11 ~~~~~~~Lis~~---a----~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n--~~d-~~TpLh~Aa~~g~~eiV~lL   80 (284)
T PHA02791         11 SKQLKSFLSSKD---A----FKADVHGHSALYYAIADNNVRLVCTLLNAGALKN--LLE-NEFPLHQAATLEDTKIVKIL   80 (284)
T ss_pred             HHHHHHHHHhCC---C----CCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCc--CCC-CCCHHHHHHHCCCHHHHHHH
Confidence            789999999987   3    4489999999999999999999999999987655  222 89999999999999999999


Q ss_pred             HhcCCCCccccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCCccCCCCCCCHHHHHHcCCCccccCCcchhhhhhhhcc
Q 005556          203 LEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKC  282 (691)
Q Consensus       203 l~~~~~~~~~~~~~~~G~t~Lh~Ai~~g~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~  282 (691)
                      ++.+++.+.   +|..|.||||+|+..|+.++++.|+++++++....                                 
T Consensus        81 L~~Gadvn~---~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~---------------------------------  124 (284)
T PHA02791         81 LFSGMDDSQ---FDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYG---------------------------------  124 (284)
T ss_pred             HHCCCCCCC---CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccC---------------------------------
Confidence            999887544   79999999999999999999999999987764311                                 


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCcccccccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHhh
Q 005556          283 IPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWT  362 (691)
Q Consensus       283 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~l~~~~~~~  362 (691)
                                                                                                      
T Consensus       125 --------------------------------------------------------------------------------  124 (284)
T PHA02791        125 --------------------------------------------------------------------------------  124 (284)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhhhccCC-ChHHHHHHHcCcHHHHHHHHHHCCccccccc-cCCCcHHHHHHhcCChhHHHHHhcCCCcccccccccCCC
Q 005556          363 NRANRNKL-KGALFTATRLGIPEFVNEFIMAYNYSALLLN-SQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSG  440 (691)
Q Consensus       363 ~~~~~~~g-~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d-~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~D~~G  440 (691)
                           ..| .||||+|+..|+.++|++|++.+++..   | ..|+||||+|+.+|+.+++++|++.|   +++|.+|..|
T Consensus       125 -----~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~---d~~~g~TpLh~Aa~~g~~eiv~lLL~~g---Ad~n~~d~~g  193 (284)
T PHA02791        125 -----KTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF---DLAILLSCIHITIKNGHVDMMILLLDYM---TSTNTNNSLL  193 (284)
T ss_pred             -----CCCCcHHHHHHHHcCCHHHHHHHHhcCCccc---ccccCccHHHHHHHcCCHHHHHHHHHCC---CCCCcccCCC
Confidence                 113 589999999999999999999877542   3 36899999999999999999999998   8999999999


Q ss_pred             Cch-hhhhhccCCCCCCCchHHhhHHHHHHHHhhhhcC-CchhHHHhhhcCCCchhhhh
Q 005556          441 NNI-LHLTGKSEPSRHVPGAALKMQRELQWFKLAKNLV-HPQFREAENKLEQTPTEVFT  497 (691)
Q Consensus       441 ~Tp-LHlAa~~g~~~~v~~~al~~~~el~~~~~v~~~~-~~~~~~~~N~~G~Tp~di~~  497 (691)
                      .|| ||+|+..|+.+.+                 +.++ ....++.+|.+ .||++..+
T Consensus       194 ~t~~L~~Aa~~~~~e~v-----------------~lLl~~Ga~in~~~~~-~~~l~~~e  234 (284)
T PHA02791        194 FIPDIKLAIDNKDLEML-----------------QALFKYDINIYSVNLE-NVLLDDAE  234 (284)
T ss_pred             CChHHHHHHHcCCHHHH-----------------HHHHHCCCCCccCccc-CccCCCHH
Confidence            987 9999999984222                 2222 23457788884 48887653

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]

Probab=99.98  E-value=8e-32  Score=237.39  Aligned_cols=162  Identities=18%  Similarity=0.100  Sum_probs=143.2

Q ss_pred             cHHHHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCC
Q 005556           68 HLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDG  147 (691)
Q Consensus        68 ~~~L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~  147 (691)
                      .++.+.+++......|.++++..|..++.+ -|.+|+||||+      ||..|  +.+||++|+...   ... ++-+|.
T Consensus         4 ~~~~~~~~~~~~~~kveel~~s~~kSL~~r-~dqD~Rt~LHw------a~S~g--~~eiv~fLlsq~---nv~-~ddkDd   70 (226)
T KOG4412|consen    4 ASLGKAICENCEEFKVEELIQSDPKSLNAR-DDQDGRTPLHW------ACSFG--HVEIVYFLLSQP---NVK-PDDKDD   70 (226)
T ss_pred             cchHHHHHhhchHHHHHHHHhcChhhhhcc-ccccCCceeee------eeecC--chhHHHHHHhcC---CCC-CCCccc
Confidence            466788888888899999999999777777 46699999999      99999  999999999854   222 566899


Q ss_pred             CCChHHHHHHHcCCHHHHHHHHHc-CchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCCCCccccccCCCCCcHHHH
Q 005556          148 GGNTVLSLCAIRGNLKASKILVKH-KHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSD  225 (691)
Q Consensus       148 ~G~TpLh~Aa~~G~~~ivk~Ll~~-~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~  225 (691)
                      .|+||||+||..|+.++|+.|+.+ +++++  ..++ |.||||||+..|+.+++++|+++++...   .+|..|.||||.
T Consensus        71 aGWtPlhia~s~g~~evVk~Ll~r~~advn--a~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~---~kD~~~qtplHR  145 (226)
T KOG4412|consen   71 AGWTPLHIAASNGNDEVVKELLNRSGADVN--ATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIR---IKDKQGQTPLHR  145 (226)
T ss_pred             cCCchhhhhhhcCcHHHHHHHhcCCCCCcc--eecCCCcceehhhhcCChhhHHHHHHhcCCCCc---ccccccCchhHH
Confidence            999999999999999999999999 78877  7777 9999999999999999999999997643   589999999999


Q ss_pred             HHHcCcHHHHHHHHHhCCCCcc
Q 005556          226 LIKANLYDVALNLLKNHPEIVH  247 (691)
Q Consensus       226 Ai~~g~~~iv~~Ll~~~~~~~~  247 (691)
                      |+.-|..+++++|+..++.++.
T Consensus       146 AAavGklkvie~Li~~~a~~n~  167 (226)
T KOG4412|consen  146 AAAVGKLKVIEYLISQGAPLNT  167 (226)
T ss_pred             HHhccchhhHHHHHhcCCCCCc
Confidence            9999999999999998765543

>PHA02989 ankyrin repeat protein; Provisional

Probab=99.97  E-value=1.2e-30  Score=289.36  Aligned_cols=280  Identities=15%  Similarity=0.096  Sum_probs=214.0

Q ss_pred             HHHHHHH---cCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccC
Q 005556           70 ELYRMIQ---MNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKD  146 (691)
Q Consensus        70 ~L~~Aa~---~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d  146 (691)
                      +||.-+.   ..+.+.|+.|++.+.+. +..   ..|.||||.      ++..++.+.++|+.|+++|   ++  ++.++
T Consensus         3 ~l~~y~~~~~~~~~~~v~~LL~~Gadv-N~~---~~g~t~l~~------~~~~~~~~~~iv~~Ll~~G---Ad--vn~~~   67 (494)
T PHA02989          3 SLYEYILYSDTVDKNALEFLLRTGFDV-NEE---YRGNSILLL------YLKRKDVKIKIVKLLIDNG---AD--VNYKG   67 (494)
T ss_pred             HHHHHHHcCCcCcHHHHHHHHHcCCCc-ccc---cCCCCHHHH------HHhcCCCChHHHHHHHHcC---CC--ccCCC
Confidence            3444443   57899999999887653 332   468899986      5544311789999999998   44  56565


Q ss_pred             CCCChHHHHHHHcC------CHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHc---CChHHHHHHHhcCCCCccccccC
Q 005556          147 GGGNTVLSLCAIRG------NLKASKILVKHKHELLIKQTNQ-NSLPVHLAALF---GHKDTFEYLLEETPGRVENFYCG  216 (691)
Q Consensus       147 ~~G~TpLh~Aa~~G------~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~---g~~~iv~~Ll~~~~~~~~~~~~~  216 (691)
                       .|.||||.|+..+      +.++|++|++.++++.  .++. |.||||.|+..   |+.+++++|+++|++.+  ..+|
T Consensus        68 -~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadin--~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin--~~~d  142 (494)
T PHA02989         68 -YIETPLCAVLRNREITSNKIKKIVKLLLKFGADIN--LKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVN--DVKN  142 (494)
T ss_pred             -CCCCcHHHHHhccCcchhhHHHHHHHHHHCCCCCC--CCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcc--cccC
Confidence             5799999998754      5789999999999977  7888 99999998765   67999999999998852  2378


Q ss_pred             CCCCcHHHHHHHc--CcHHHHHHHHHhCCCCccCCCCC-CCHHHHHHcCCCccccCCcchhhhhhhhccccccccccCCC
Q 005556          217 GDGGRLLSDLIKA--NLYDVALNLLKNHPEIVHDIDSQ-KMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTN  293 (691)
Q Consensus       217 ~~G~t~Lh~Ai~~--g~~~iv~~Ll~~~~~~~~~~d~~-~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~  293 (691)
                      ..|.||||+|+..  ++.++++.|+++++++....+.. .||||.|+..+..   ....++++.|+.             
T Consensus       143 ~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~---~~~~~iv~~Ll~-------------  206 (494)
T PHA02989        143 SRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDID---VISIKVIKYLIK-------------  206 (494)
T ss_pred             CCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccc---cccHHHHHHHHh-------------
Confidence            9999999999864  58999999999999887655555 9999999875311   122334444433             


Q ss_pred             CCCCCCCCCCCCCCcccCCCCCCCCCCCcccccccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhccCCChH
Q 005556          294 DNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGA  373 (691)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tp  373 (691)
                                                                                      .+.+++..+ ..+.||
T Consensus       207 ----------------------------------------------------------------~Ga~vn~~~-~~~~t~  221 (494)
T PHA02989        207 ----------------------------------------------------------------KGVNIETNN-NGSESV  221 (494)
T ss_pred             ----------------------------------------------------------------CCCCccccC-CccccH
Confidence                                                                            333333222 347889


Q ss_pred             HHHHHHc------CcHHHHHHHHHHCCccccccccCCCcHHHHHHhcCChhHHHHHhcCCCcccccccccCCCCchhhhh
Q 005556          374 LFTATRL------GIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHLT  447 (691)
Q Consensus       374 Lh~Aa~~------G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~D~~G~TpLHlA  447 (691)
                      ||.++..      +..+++++|+. +. .++.+|..|+||||+|+..++.+++++|++.|   +++|.+|..|+||||+|
T Consensus       222 l~~~~~~~~~~~~~~~~il~~l~~-~a-dvn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~G---adin~~d~~G~TpL~~A  296 (494)
T PHA02989        222 LESFLDNNKILSKKEFKVLNFILK-YI-KINKKDKKGFNPLLISAKVDNYEAFNYLLKLG---DDIYNVSKDGDTVLTYA  296 (494)
T ss_pred             HHHHHHhchhhcccchHHHHHHHh-CC-CCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcC---CCccccCCCCCCHHHHH
Confidence            9887654      35678876665 44 46788999999999999999999999999998   99999999999999999


Q ss_pred             hccCCCCC
Q 005556          448 GKSEPSRH  455 (691)
Q Consensus       448 a~~g~~~~  455 (691)
                      ++.|+.+.
T Consensus       297 ~~~~~~~i  304 (494)
T PHA02989        297 IKHGNIDM  304 (494)
T ss_pred             HHcCCHHH
Confidence            99988533

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.97  E-value=9e-31  Score=262.21  Aligned_cols=195  Identities=15%  Similarity=0.180  Sum_probs=159.5

Q ss_pred             HHHHHHcCCHHHHHHHHhcCh--hhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCcc----ccc
Q 005556           71 LYRMIQMNDWQSVDGFVQSNT--DILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISET----LSC  144 (691)
Q Consensus        71 L~~Aa~~G~~~~v~~ll~~~~--~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~----l~~  144 (691)
                      .+.|++.|+...+..|+....  +.....+...+|.|||-+      ||++|  |.++|++|+++...+++.-    .+-
T Consensus         8 ~~naa~~g~l~~l~~ll~~~s~~ei~~l~~~~~~g~tPL~i------aaRnG--H~~vVeyLle~~~a~~e~~GsV~FDg   79 (615)
T KOG0508|consen    8 VINAARDGKLQLLAKLLINSSNEEIISLIGEVQNGGTPLLI------AARNG--HADVVEYLLEHCRASPEQGGSVRFDG   79 (615)
T ss_pred             HHHHhhhhhHHHHHHHHhCCchHHHHHHhccccCCCCceee------ehhcC--cHHHHHHHHHHhcCCccCCceEEeCC
Confidence            358999999999888887632  121111246789999999      99999  9999999999764333320    222


Q ss_pred             cCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCCCCccccccCCCCCcHH
Q 005556          145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLL  223 (691)
Q Consensus       145 ~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~L  223 (691)
                      .+-.|.+||-.|+..||.++||.|++++++++  .... ..|||--||.-|+.++|++|++++++...   .|+.|.|.|
T Consensus        80 e~IegappLWaAsaAGHl~vVk~L~~~ga~VN--~tT~TNStPLraACfDG~leivKyLvE~gad~~I---anrhGhTcL  154 (615)
T KOG0508|consen   80 ETIEGAPPLWAASAAGHLEVVKLLLRRGASVN--DTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEI---ANRHGHTCL  154 (615)
T ss_pred             cccCCCchhhHHhccCcHHHHHHHHHhcCccc--cccccCCccHHHHHhcchhHHHHHHHHcCCCCcc---cccCCCeeE
Confidence            35578899999999999999999999998776  4445 88999999999999999999999998654   799999999


Q ss_pred             HHHHHcCcHHHHHHHHHhCCCCccCCCCCCCHHHHHHcCCCccccCCcchhhhhhhhccccc
Q 005556          224 SDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPV  285 (691)
Q Consensus       224 h~Ai~~g~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v  285 (691)
                      |+|+.+|+.+++++|++.+++++...-++.|+||.++..|       .+++++.++.++...
T Consensus       155 mIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG-------~vdivq~Ll~~ga~i  209 (615)
T KOG0508|consen  155 MIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESG-------SVDIVQLLLKHGAKI  209 (615)
T ss_pred             EeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcc-------cHHHHHHHHhCCcee
Confidence            9999999999999999999999886666699999999864       568899888876533

>PHA02875 ankyrin repeat protein; Provisional

Probab=99.97  E-value=1.2e-30  Score=283.90  Aligned_cols=244  Identities=14%  Similarity=0.014  Sum_probs=203.3

Q ss_pred             CcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC
Q 005556          103 SLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ  182 (691)
Q Consensus       103 g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~  182 (691)
                      .+++||.      |+..|  +.++++.|++.|   .+  ++.++..|.||||+|+..|+.+++++|++.+++..  ..+.
T Consensus         2 ~~~~L~~------A~~~g--~~~iv~~Ll~~g---~~--~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~--~~~~   66 (413)
T PHA02875          2 DQVALCD------AILFG--ELDIARRLLDIG---IN--PNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPD--VKYP   66 (413)
T ss_pred             CchHHHH------HHHhC--CHHHHHHHHHCC---CC--CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcc--ccCC
Confidence            4688888      99999  999999999998   44  56788899999999999999999999999988765  6667


Q ss_pred             -CCcHHHHHHHcCChHHHHHHHhcCCCCccccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCCccCCCCCCCHHHHHHc
Q 005556          183 -NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLAL  261 (691)
Q Consensus       183 -G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~Ai~~g~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~  261 (691)
                       |.||||.|+..|+.+++++|++.++....  ..+.+|.||||+|+..|+.++++.|++++++.... +           
T Consensus        67 ~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~--~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~-~-----------  132 (413)
T PHA02875         67 DIESELHDAVEEGDVKAVEELLDLGKFADD--VFYKDGMTPLHLATILKKLDIMKLLIARGADPDIP-N-----------  132 (413)
T ss_pred             CcccHHHHHHHCCCHHHHHHHHHcCCcccc--cccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCC-C-----------
Confidence             99999999999999999999999876432  35778999999999999999999999998765331 0           


Q ss_pred             CCCccccCCcchhhhhhhhccccccccccCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCcccccccCCCcchhHHHHHH
Q 005556          262 KPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAE  341 (691)
Q Consensus       262 ~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (691)
                                                                                                      
T Consensus       133 --------------------------------------------------------------------------------  132 (413)
T PHA02875        133 --------------------------------------------------------------------------------  132 (413)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             HhhhHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHcCcHHHHHHHHHHCCccccccccCCCcHHHHHHhcCChhHHH
Q 005556          342 KLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFN  421 (691)
Q Consensus       342 ~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~  421 (691)
                                                ..|.||||+|+..|+.++++.|++.+++ .+.+|..|+||||+|+..|+.++++
T Consensus       133 --------------------------~~g~tpLh~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~TpL~~A~~~g~~eiv~  185 (413)
T PHA02875        133 --------------------------TDKFSPLHLAVMMGDIKGIELLIDHKAC-LDIEDCCGCTPLIIAMAKGDIAICK  185 (413)
T ss_pred             --------------------------CCCCCHHHHHHHcCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHH
Confidence                                      2378999999999999999999999877 4678999999999999999999999


Q ss_pred             HHhcCCCcccccccccCCCC-chhhhhhccCCCCCCCchHHhhHHHHHHHHhhhhcCCchhHHHhhhcCCCchhhhhH
Q 005556          422 LIHGVNSSYFSISLEDKSGN-NILHLTGKSEPSRHVPGAALKMQRELQWFKLAKNLVHPQFREAENKLEQTPTEVFTK  498 (691)
Q Consensus       422 ~Ll~~~~~~~~~n~~D~~G~-TpLHlAa~~g~~~~v~~~al~~~~el~~~~~v~~~~~~~~~~~~N~~G~Tp~di~~~  498 (691)
                      +|++.|   ++++..|.+|. ||+|+|+..|+.+.+.           +.  ++....+......+++|.||++++..
T Consensus       186 ~Ll~~g---a~~n~~~~~~~~t~l~~A~~~~~~~iv~-----------~L--l~~gad~n~~~~~~~~~~t~l~~~~~  247 (413)
T PHA02875        186 MLLDSG---ANIDYFGKNGCVAALCYAIENNKIDIVR-----------LF--IKRGADCNIMFMIEGEECTILDMICN  247 (413)
T ss_pred             HHHhCC---CCCCcCCCCCCchHHHHHHHcCCHHHHH-----------HH--HHCCcCcchHhhcCCCchHHHHHHHh
Confidence            999998   99999999885 8999999999853321           11  11122222234457789999998754

>PHA02878 ankyrin repeat protein; Provisional

Probab=99.97  E-value=2.1e-30  Score=286.59  Aligned_cols=271  Identities=10%  Similarity=-0.017  Sum_probs=201.4

Q ss_pred             hhhhccHHHHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccc
Q 005556           63 EKYRRHLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETL  142 (691)
Q Consensus        63 ~~~~~~~~L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l  142 (691)
                      .+..+.||||.||..|+.+.++.+++......     ...+.+|||.      |+..|  +.++++.|+..+   ... .
T Consensus        66 ~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~-----~~~~~~~l~~------a~~~~--~~ei~~~Ll~~~---~~~-~  128 (477)
T PHA02878         66 PDHRDLTPLHIICKEPNKLGMKEMIRSINKCS-----VFYTLVAIKD------AFNNR--NVEIFKIILTNR---YKN-I  128 (477)
T ss_pred             CCCCCCCHHHHHHHCccHhHHHHHHHHHhccc-----cccchhhHHH------HHHcC--CHHHHHHHHhCc---ccC-c
Confidence            34568899999999999999999998744321     3457899999      99999  999999999875   111 0


Q ss_pred             cccCCCCChHHHHHHHcC--CHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCCCCccccccCCCC
Q 005556          143 SCKDGGGNTVLSLCAIRG--NLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDG  219 (691)
Q Consensus       143 ~~~d~~G~TpLh~Aa~~G--~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G  219 (691)
                         .......+..+...+  +.+++++|++.++++. ..... |.||||+||..|+.+++++|++.+++.+.   .|..|
T Consensus       129 ---~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin-~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~---~d~~g  201 (477)
T PHA02878        129 ---QTIDLVYIDKKSKDDIIEAEITKLLLSYGADIN-MKDRHKGNTALHYATENKDQRLTELLLSYGANVNI---PDKTN  201 (477)
T ss_pred             ---ccCcHHHHhhccchhhHHHHHHHHHHHcCCCCC-ccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCC---cCCCC
Confidence               000111122222222  3569999999999988 55555 99999999999999999999999987543   78999


Q ss_pred             CcHHHHHHHcCcHHHHHHHHHhCCCCccCCCCCCCHHHHHHcCCCccccCCcchhhhhhhhccccccccccCCCCCCCCC
Q 005556          220 GRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVA  299 (691)
Q Consensus       220 ~t~Lh~Ai~~g~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~  299 (691)
                      .||||.|+..|+.++++.|++.+++.......+.||||+|+..+      ...++++.++...                 
T Consensus       202 ~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~------~~~~iv~~Ll~~g-----------------  258 (477)
T PHA02878        202 NSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYC------KDYDILKLLLEHG-----------------  258 (477)
T ss_pred             CCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhc------CCHHHHHHHHHcC-----------------
Confidence            99999999999999999999999988765444499999999742      2334444444432                 


Q ss_pred             CCCCCCCCcccCCCCCCCCCCCcccccccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHH
Q 005556          300 GDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATR  379 (691)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~  379 (691)
                                                                                  .+++......|.||||.|  
T Consensus       259 ------------------------------------------------------------advn~~~~~~g~TpLh~A--  276 (477)
T PHA02878        259 ------------------------------------------------------------VDVNAKSYILGLTALHSS--  276 (477)
T ss_pred             ------------------------------------------------------------CCCCccCCCCCCCHHHHH--
Confidence                                                                        222222213589999999  


Q ss_pred             cCcHHHHHHHHHHCCccccccccCCCcHHHHHHhcC-ChhHHHHHhcCCC--cccccccccCCCCch
Q 005556          380 LGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHR-REKVFNLIHGVNS--SYFSISLEDKSGNNI  443 (691)
Q Consensus       380 ~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~-~~~iv~~Ll~~~~--~~~~~n~~D~~G~Tp  443 (691)
                      .++.++++.|++.+++ ++.+|.+|+||||+|+..+ ..+++++|+....  .....+.++.+|.++
T Consensus       277 ~~~~~~v~~Ll~~gad-in~~d~~g~TpL~~A~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~g~~~  342 (477)
T PHA02878        277 IKSERKLKLLLEYGAD-INSLNSYKLTPLSSAVKQYLCINIGRILISNICLLKRIKPDIKNSEGFID  342 (477)
T ss_pred             ccCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHHcCccchHHHHHHHHHHHHhccCcccCcHHHHH
Confidence            5788999999999988 4688999999999999864 5678888776531  123455566666544

>PHA02917 ankyrin-like protein; Provisional

Probab=99.97  E-value=9e-30  Score=286.26  Aligned_cols=359  Identities=10%  Similarity=0.023  Sum_probs=230.5

Q ss_pred             hhhhccHHHHHHHHcCCHHHH----HHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCC
Q 005556           63 EKYRRHLELYRMIQMNDWQSV----DGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDI  138 (691)
Q Consensus        63 ~~~~~~~~L~~Aa~~G~~~~v----~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~  138 (691)
                      .+..+.||||.|+..|+.+.+    +.|++..... +   .+ +..+++|.      |+..|  +.++|++|+++|   .
T Consensus        64 ~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~-n---~~-~~~~~~~~------a~~~~--~~e~vk~Ll~~G---a  127 (661)
T PHA02917         64 KNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYS-N---IN-DFNIFSYM------KSKNV--DVDLIKVLVEHG---F  127 (661)
T ss_pred             cCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCC-C---CC-CcchHHHH------HhhcC--CHHHHHHHHHcC---C
Confidence            344578999999999986544    4555543321 1   12 23477788      99999  999999999998   5


Q ss_pred             CccccccCCCCChHHHHHH--HcCCHHHHHHHHHcCchhhhcC--CCC-C-----------CcHHHHHHH----------
Q 005556          139 SETLSCKDGGGNTVLSLCA--IRGNLKASKILVKHKHELLIKQ--TNQ-N-----------SLPVHLAAL----------  192 (691)
Q Consensus       139 ~~~l~~~d~~G~TpLh~Aa--~~G~~~ivk~Ll~~~~~l~~~~--~n~-G-----------~TpLh~Aa~----------  192 (691)
                      +  ++.+|.+|.||||+|+  ..|+.++|++|+++++++. ..  .+. |           .||||+|+.          
T Consensus       128 d--in~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn-~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~  204 (661)
T PHA02917        128 D--LSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVL-YEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTR  204 (661)
T ss_pred             C--CCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcc-ccccccccccccccccccccccHHHHHHhhccccccccc
Confidence            4  7889999999999654  5789999999999999875 22  122 4           599999986          


Q ss_pred             -cCChHHHHHHHhcCCCCccccccCCCCCcHHHHHHHcCcH--HHHHHHHHhCCCCcc---CCCCC-CCHHHHHHcCCCc
Q 005556          193 -FGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLY--DVALNLLKNHPEIVH---DIDSQ-KMALDSLALKPYA  265 (691)
Q Consensus       193 -~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~Ai~~g~~--~iv~~Ll~~~~~~~~---~~d~~-~TpLh~Aa~~~~~  265 (691)
                       .|+.++|++|++.|++.+.   +|.+|.||||+|+.+|+.  ++++.|++ +.+...   ..+.. .+|+|+|+..++.
T Consensus       205 ~~~~~eiv~~Li~~Gadvn~---~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~~~~~~~~~~~~~~~~~a~yl~~~  280 (661)
T PHA02917        205 AYVRPEVVKCLINHGIKPSS---IDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNTAYSYIDDLTCCTRGIMADYLNSD  280 (661)
T ss_pred             ccCcHHHHHHHHHCCCCccc---CCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCcccccccccCcccccchHHHHHHHhh
Confidence             5689999999999998654   799999999999999985  79999985 665542   23444 7889999853322


Q ss_pred             ccc--CCcchhhhhhhhccccccccc--cCCC-CCCCCCC-CCCCCCCccc---CC---CCCCCCCCCcccccccCCCcc
Q 005556          266 FES--GSRLGCLEGFIYKCIPVTKQL--SQTN-DNPNVAG-DTENGIGTTN---GH---SKKSIPYGSTQQITTYDAKWP  333 (691)
Q Consensus       266 f~s--~~~l~~~~~li~~~~~v~~~~--~~~~-~~~~~~~-~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~  333 (691)
                      +..  ....++++.||..+.......  .... .+..+.. -.....+.+.   +.   ..++.+....+.+...+....
T Consensus       281 ~~~~~~v~~~iv~~Li~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~v~~Ll~~GAdvn  360 (661)
T PHA02917        281 YRYNKDVDLDLVKLFLENGKPHGIMCSIVPLWRNDKETISLILKTMNSDVLQHILIEYMTFGDIDIPLVECMLEYGAVVN  360 (661)
T ss_pred             ccccccchHHHHHHHHhCCCCCceeEeeecccccchHHHHHHHHHhchHHHHHHHHHHHHcCCCcHHHHHHHHHcCCCCC
Confidence            222  236678888888664321000  0000 0000000 0000000000   00   000000000011111111000


Q ss_pred             hhH-HHH-HHHhhhHHHHHHHHHHHH-HHHhhhhhhccCCChHHHHHHHcC-----------------------cHHHHH
Q 005556          334 CFK-AIY-AEKLTHMRTVEIVRFICE-NVIWTNRANRNKLKGALFTATRLG-----------------------IPEFVN  387 (691)
Q Consensus       334 ~~~-~~~-~~~~~~~~~~~lL~~l~~-~~~~~~~~~~~~g~tpLh~Aa~~G-----------------------~~eiv~  387 (691)
                      ... ..+ +....+.   +.+..++. .+.+.+... ..|+||||.|++.+                       ..++++
T Consensus       361 ~~~~~g~~~~~~~~~---~~i~~LL~~~ga~~~~~~-~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  436 (661)
T PHA02917        361 KEAIHGYFRNINIDS---YTMKYLLKKEGGDAVNHL-DDGEIPIGHLCKSNYGCYNFYTYTYKKGLCDMSYACPILSTIN  436 (661)
T ss_pred             CCCccccchhhcCCH---HHHHHHHHhcCCCccccC-CCCCChhHHHHHhcccchhhhhhhhhhccchhhhhhhhHHHHH
Confidence            000 000 0011111   23333333 222223222 45999999998543                       356789


Q ss_pred             HHHHHCCccccccccCCCcHHHHHHhcCChhHHHHHhcCCCcccccccccCCCCchhhhhhc-cCC
Q 005556          388 EFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHLTGK-SEP  452 (691)
Q Consensus       388 ~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~D~~G~TpLHlAa~-~g~  452 (691)
                      .|+.++++ ++.+|..|+||||+|+..++.+++++|++.|   +++|.+|..|+||||+|+. .++
T Consensus       437 ~Ll~~GAd-IN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~G---Adin~~d~~G~T~L~~A~~~~~~  498 (661)
T PHA02917        437 ICLPYLKD-INMIDKRGETLLHKAVRYNKQSLVSLLLESG---SDVNIRSNNGYTCIAIAINESRN  498 (661)
T ss_pred             HHHHCCCC-CCCCCCCCcCHHHHHHHcCCHHHHHHHHHCc---CCCCCCCCCCCCHHHHHHHhCCC
Confidence            99999888 5789999999999999999999999999998   9999999999999999996 444

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]

Probab=99.97  E-value=3.2e-31  Score=299.88  Aligned_cols=368  Identities=16%  Similarity=0.134  Sum_probs=247.2

Q ss_pred             hhhccHHHHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCcccc
Q 005556           64 KYRRHLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLS  143 (691)
Q Consensus        64 ~~~~~~~L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~  143 (691)
                      ...+.||||.|+..+..+.+..++.++. .+...  |.+|-||||.      |+..|  +.+++.+|+.++   ..  .+
T Consensus       206 ~~~~~tpl~~a~~~nri~~~eLll~~ga-dv~a~--d~~gl~~lh~------a~~~g--~~~i~~~l~~~g---a~--~~  269 (1143)
T KOG4177|consen  206 ALNGFTPLHIACKKNRIKVVELLLKHGA-DVSAK--DESGLTPLHV------AAFMG--HLDIVKLLLQHG---AS--VN  269 (1143)
T ss_pred             ccCCCCchhhhccccccceeeeeeeccC-cCCcc--cccCccHHHH------HHhcc--chhHHHHHHhcc---cc--cC
Confidence            3446678888887777777766655543 33444  7788888888      88888  888888888887   44  56


Q ss_pred             ccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCCCCccccccCCCCCcH
Q 005556          144 CKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRL  222 (691)
Q Consensus       144 ~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~  222 (691)
                      ..+.+|.||||.||+.+..+++++|++.+.++.  .++. +.||+|.|.+.|+.++++++++.++..+.   .+..|.||
T Consensus       270 ~~~vr~~tplh~AA~~~~~e~~~~ll~~ga~~~--~~~~~~kt~l~~a~~~g~~~i~~~~l~~~~~~~a---ar~~g~t~  344 (1143)
T KOG4177|consen  270 VSTVRGETPLHMAARAGQVEVCKLLLQNGADVL--AKARDDQTPLHIASRLGHEEIVHLLLQAGATPNA---ARTAGYTP  344 (1143)
T ss_pred             cccccccCcchhhhccchhhhHhhhhccCcccc--cccccccChhhhhcccchHHHHHHHhhccCCccc---cCcCCccc
Confidence            678888888888888888888888888877776  6666 88888888888888888888887766443   67888888


Q ss_pred             HHHHHHcCcHHHHHHHHHhCCCCccCCCCCCCHHHHHHcCCCccccCCcchhhhhhhhccccccccccCCCCCCCCCCCC
Q 005556          223 LSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDT  302 (691)
Q Consensus       223 Lh~Ai~~g~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~  302 (691)
                      ||+++..++.+++..|...+++.......+.||+|+|+..+.       ...++.++...           ..+    +.
T Consensus       345 lHlaa~~~~~~~~~~l~~~~~~~~~a~~k~~~pl~la~~~g~-------~~~v~Lll~~g-----------a~~----~~  402 (1143)
T KOG4177|consen  345 LHLAAKEGQVEVAGALLEHGAQRRQAEEKGFTPLHLAVKSGR-------VSVVELLLEAG-----------ADP----NS  402 (1143)
T ss_pred             ccHhhhhhhHHHHHHhhccccccCcccccCCcchhhhcccCc-------hhHHHhhhhcc-----------CCc----cc
Confidence            888888888887777777766665543434888888887643       23333333222           222    23


Q ss_pred             CCCCCcccCCCCCCCC-CCCcccccccCCCc------chhHHHHHHHhh-hHHHHHHHHHHHHHHHhhhhhhccCCChHH
Q 005556          303 ENGIGTTNGHSKKSIP-YGSTQQITTYDAKW------PCFKAIYAEKLT-HMRTVEIVRFICENVIWTNRANRNKLKGAL  374 (691)
Q Consensus       303 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~~~~-~~~~~~lL~~l~~~~~~~~~~~~~~g~tpL  374 (691)
                      ..+.|.++++...... ....+.+.+.+.+.      ..+..+.+++.+ +.+....+....   .+.+... ..|.|||
T Consensus       403 ~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g---~~~n~~s-~~G~T~L  478 (1143)
T KOG4177|consen  403 AGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQYG---ADPNAVS-KQGFTPL  478 (1143)
T ss_pred             CCCCCcceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhhhhhcccHhhhhhhHhhcC---CCcchhc-cccCcch
Confidence            3445677766655544 22222222222110      122233333333 333222222211   1111111 4567777


Q ss_pred             HHHHHcCcHHHHHHHHHHC---------------------------------CccccccccCCCcHHHHHHhcCChhHHH
Q 005556          375 FTATRLGIPEFVNEFIMAY---------------------------------NYSALLLNSQNHGIFELAVLHRREKVFN  421 (691)
Q Consensus       375 h~Aa~~G~~eiv~~LL~~~---------------------------------~~~~~~~d~~G~T~Lh~A~~~~~~~iv~  421 (691)
                      |+|+..|+.++++.+++..                                 .. .+.++..|.||||+|+.+|+.++|+
T Consensus       479 hlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~-v~~~~~r~~TpLh~A~~~g~v~~Vk  557 (1143)
T KOG4177|consen  479 HLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGAN-VDLRTGRGYTPLHVAVHYGNVDLVK  557 (1143)
T ss_pred             hhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCc-eehhcccccchHHHHHhcCCchHHH
Confidence            7777777777776666643                                 22 3567889999999999999999999


Q ss_pred             HHhcCCCcccccccccCCCCchhhhhhccCCCCCCCchHHhhHHHHHHHHhhhhcC-CchhHHHhhhcCCCchhhhhHH
Q 005556          422 LIHGVNSSYFSISLEDKSGNNILHLTGKSEPSRHVPGAALKMQRELQWFKLAKNLV-HPQFREAENKLEQTPTEVFTKE  499 (691)
Q Consensus       422 ~Ll~~~~~~~~~n~~D~~G~TpLHlAa~~g~~~~v~~~al~~~~el~~~~~v~~~~-~~~~~~~~N~~G~Tp~di~~~~  499 (691)
                      +|+++|   ++++++|+.|+||||.||..|+.+++                 +.++ ++..+|..+.+|.||+.++...
T Consensus       558 fLLe~g---Adv~ak~~~G~TPLH~Aa~~G~~~i~-----------------~LLlk~GA~vna~d~~g~TpL~iA~~l  616 (1143)
T KOG4177|consen  558 FLLEHG---ADVNAKDKLGYTPLHQAAQQGHNDIA-----------------ELLLKHGASVNAADLDGFTPLHIAVRL  616 (1143)
T ss_pred             HhhhCC---ccccccCCCCCChhhHHHHcChHHHH-----------------HHHHHcCCCCCcccccCcchhHHHHHh
Confidence            999998   99999999999999999999974322                 1111 4456889999999999998754

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.97  E-value=8.8e-31  Score=262.28  Aligned_cols=187  Identities=18%  Similarity=0.151  Sum_probs=161.3

Q ss_pred             ccHHHHHHHHcCCHHHHHHHHhcChhhhhc------ccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCc
Q 005556           67 RHLELYRMIQMNDWQSVDGFVQSNTDILKE------HNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISE  140 (691)
Q Consensus        67 ~~~~L~~Aa~~G~~~~v~~ll~~~~~~~~~------~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~  140 (691)
                      +-|||..||++|+.++|+.|+++....+..      .+.+..|-+||..      |+..|  |.++|+.|++++   .+ 
T Consensus        42 g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWa------AsaAG--Hl~vVk~L~~~g---a~-  109 (615)
T KOG0508|consen   42 GGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWA------ASAAG--HLEVVKLLLRRG---AS-  109 (615)
T ss_pred             CCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhH------HhccC--cHHHHHHHHHhc---Cc-
Confidence            459999999999999999999964332211      1346678999999      99999  999999999998   44 


Q ss_pred             cccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCCCCccccccCCCC
Q 005556          141 TLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDG  219 (691)
Q Consensus       141 ~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G  219 (691)
                       +|.......|||--||.-|+.++||+|+++++++.  +.|. |.|.||+||..||.+++++|++.+++.+.   ++..|
T Consensus       110 -VN~tT~TNStPLraACfDG~leivKyLvE~gad~~--IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~---ks~kG  183 (615)
T KOG0508|consen  110 -VNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPE--IANRHGHTCLMIACYKGHVDIAQYLLEQGADVNA---KSYKG  183 (615)
T ss_pred             -cccccccCCccHHHHHhcchhHHHHHHHHcCCCCc--ccccCCCeeEEeeeccCchHHHHHHHHhCCCcch---hcccC
Confidence             67677778899999999999999999999999987  9999 99999999999999999999999999654   89999


Q ss_pred             CcHHHHHHHcCcHHHHHHHHHhCCCCccCCCCC-CCHHHHHHcCCCccccCCcchhhhhhhh
Q 005556          220 GRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQ-KMALDSLALKPYAFESGSRLGCLEGFIY  280 (691)
Q Consensus       220 ~t~Lh~Ai~~g~~~iv~~Ll~~~~~~~~~~d~~-~TpLh~Aa~~~~~f~s~~~l~~~~~li~  280 (691)
                      .|+||.|+..|+.|++++|++++..+..  |.. .|||..|+..|       ...++++++.
T Consensus       184 NTALH~caEsG~vdivq~Ll~~ga~i~~--d~~GmtPL~~Aa~tG-------~~~iVe~L~~  236 (615)
T KOG0508|consen  184 NTALHDCAESGSVDIVQLLLKHGAKIDV--DGHGMTPLLLAAVTG-------HTDIVERLLQ  236 (615)
T ss_pred             chHHHhhhhcccHHHHHHHHhCCceeee--cCCCCchHHHHhhhc-------chHHHHHHhc
Confidence            9999999999999999999999876654  444 99999999864       3466666664

>PHA02798 ankyrin-like protein; Provisional

Probab=99.97  E-value=6.3e-30  Score=283.28  Aligned_cols=277  Identities=16%  Similarity=0.196  Sum_probs=203.0

Q ss_pred             HHHHHHHcC---CHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccC
Q 005556           70 ELYRMIQMN---DWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKD  146 (691)
Q Consensus        70 ~L~~Aa~~G---~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d  146 (691)
                      +||.-+...   +.+.|+.|++.+..  +.   ...|.|+++.    ..+...+  +.++|+.|+++|   ++  ++.+|
T Consensus         5 ~l~~y~~~~~~~~~~~v~~ll~~~~~--~~---~~~~~~~~~~----yl~~~~~--~~~iv~~Ll~~G---ad--vn~~d   68 (489)
T PHA02798          5 NLYNYITFSDNVKLSTVKLLIKSCNP--NE---IVNEYSIFQK----YLQRDSP--STDIVKLFINLG---AN--VNGLD   68 (489)
T ss_pred             hhHHHeeecCcccHHHHHHHHhcCCh--hh---hcccchHHHH----HHhCCCC--CHHHHHHHHHCC---CC--CCCCC
Confidence            455554433   47799999975321  11   2446787774    0134445  899999999998   54  78899


Q ss_pred             CCCChHHHHHHHc-----CCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcC---ChHHHHHHHhcCCCCccccccCC
Q 005556          147 GGGNTVLSLCAIR-----GNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFG---HKDTFEYLLEETPGRVENFYCGG  217 (691)
Q Consensus       147 ~~G~TpLh~Aa~~-----G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g---~~~iv~~Ll~~~~~~~~~~~~~~  217 (691)
                      ..|.||||.|+..     ++.+++++|++.+++++  .++. |.||||+|+..|   +.+++++|+++|++...   .|.
T Consensus        69 ~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN--~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~---~d~  143 (489)
T PHA02798         69 NEYSTPLCTILSNIKDYKHMLDIVKILIENGADIN--KKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTL---LDK  143 (489)
T ss_pred             CCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCC--CCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccc---cCC
Confidence            9999999999864     77999999999999976  7888 999999999986   78999999999988654   799


Q ss_pred             CCCcHHHHHHHcCc---HHHHHHHHHhCCCCccCCCCC-CCHHHHHHcCCCccccCCcchhhhhhhhccccccccccCCC
Q 005556          218 DGGRLLSDLIKANL---YDVALNLLKNHPEIVHDIDSQ-KMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTN  293 (691)
Q Consensus       218 ~G~t~Lh~Ai~~g~---~~iv~~Ll~~~~~~~~~~d~~-~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~  293 (691)
                      +|.||||+|+..++   .++++.|++++.++....+.. .||||.++.....   ..+.++++.++.....+        
T Consensus       144 ~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~---~~~~~ivk~Li~~Ga~i--------  212 (489)
T PHA02798        144 DGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNID---RIDADILKLFVDNGFII--------  212 (489)
T ss_pred             CCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccc---cCCHHHHHHHHHCCCCc--------
Confidence            99999999999988   999999999999988766666 9999998875311   23445566555543222        


Q ss_pred             CCCCCCCCCCCCCCcccCCCCCCCCCCCcccccccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhccCCChH
Q 005556          294 DNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGA  373 (691)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tp  373 (691)
                                                                                           +... ..|.++
T Consensus       213 ---------------------------------------------------------------------~~~~-~~~~~~  222 (489)
T PHA02798        213 ---------------------------------------------------------------------NKEN-KSHKKK  222 (489)
T ss_pred             ---------------------------------------------------------------------ccCC-ccccch
Confidence                                                                                 1111 123333


Q ss_pred             HH-------HHHHcCcHHHHHHHHHHCCccccccccCCCcHHHHHHhcCChhHHHHHhcCCCcccccccccCCCCchhhh
Q 005556          374 LF-------TATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHL  446 (691)
Q Consensus       374 Lh-------~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~D~~G~TpLHl  446 (691)
                      ++       .+...++.++++.|+. +.+ ++.+|..|+||||+|+.+++.+++++|++.|   +++|.+|..|+||||+
T Consensus       223 ~~~~l~~l~~~~~~~~~~i~~~l~~-~~d-vN~~d~~G~TPL~~A~~~~~~~~v~~LL~~G---Adin~~d~~G~TpL~~  297 (489)
T PHA02798        223 FMEYLNSLLYDNKRFKKNILDFIFS-YID-INQVDELGFNPLYYSVSHNNRKIFEYLLQLG---GDINIITELGNTCLFT  297 (489)
T ss_pred             HHHHHHHHHhhcccchHHHHHHHHh-cCC-CCCcCcCCccHHHHHHHcCcHHHHHHHHHcC---CcccccCCCCCcHHHH
Confidence            33       2445566777766554 333 5677777788888888777777888887776   7777788888888888


Q ss_pred             hhccCCC
Q 005556          447 TGKSEPS  453 (691)
Q Consensus       447 Aa~~g~~  453 (691)
                      |++.++.
T Consensus       298 A~~~~~~  304 (489)
T PHA02798        298 AFENESK  304 (489)
T ss_pred             HHHcCcH
Confidence            7777764

>PHA02989 ankyrin repeat protein; Provisional

Probab=99.97  E-value=3e-29  Score=278.29  Aligned_cols=262  Identities=14%  Similarity=0.121  Sum_probs=205.7

Q ss_pred             hccHHHHHHHHcC--CHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCC----CCHHHHHHHHhccCCCCC
Q 005556           66 RRHLELYRMIQMN--DWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDD----EATDLIDKLAQSTDVDIS  139 (691)
Q Consensus        66 ~~~~~L~~Aa~~G--~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~----~~~~iv~~Ll~~~~~~~~  139 (691)
                      .+.++|+.++..+  +.++|+.|++.+.+. +.+  + .+.||||.      |+..+.    .+.++|+.|+++|   ++
T Consensus        34 ~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdv-n~~--~-~~~tpL~~------a~~~~~~~~~~~~~iv~~Ll~~G---ad  100 (494)
T PHA02989         34 RGNSILLLYLKRKDVKIKIVKLLIDNGADV-NYK--G-YIETPLCA------VLRNREITSNKIKKIVKLLLKFG---AD  100 (494)
T ss_pred             CCCCHHHHHHhcCCCChHHHHHHHHcCCCc-cCC--C-CCCCcHHH------HHhccCcchhhHHHHHHHHHHCC---CC
Confidence            4668887766554  689999999987654 433  3 57999999      876540    0578999999998   54


Q ss_pred             ccccccCCCCChHHHHHHHc---CCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHc--CChHHHHHHHhcCCCCcccc
Q 005556          140 ETLSCKDGGGNTVLSLCAIR---GNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALF--GHKDTFEYLLEETPGRVENF  213 (691)
Q Consensus       140 ~~l~~~d~~G~TpLh~Aa~~---G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~--g~~~iv~~Ll~~~~~~~~~~  213 (691)
                        ++.+|..|.||||.|+..   |+.+++++|++++++++ ..++. |.||||+|+..  ++.++|++|++.|++...  
T Consensus       101 --in~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin-~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~--  175 (494)
T PHA02989        101 --INLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVN-DVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFE--  175 (494)
T ss_pred             --CCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcc-cccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccc--
Confidence              788999999999988755   78999999999999994 47888 99999999864  689999999999987543  


Q ss_pred             ccCCCCCcHHHHHHHcC----cHHHHHHHHHhCCCCccCCCCC-CCHHHHHHcCCCccccCCcchhhhhhhhcccccccc
Q 005556          214 YCGGDGGRLLSDLIKAN----LYDVALNLLKNHPEIVHDIDSQ-KMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQ  288 (691)
Q Consensus       214 ~~~~~G~t~Lh~Ai~~g----~~~iv~~Ll~~~~~~~~~~d~~-~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~  288 (691)
                      ..+..|.||||.|+..+    +.+++++|++++.++... +.+ .||||.++..+.... ..                  
T Consensus       176 ~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~-~~~~~t~l~~~~~~~~~~~-~~------------------  235 (494)
T PHA02989        176 KTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETN-NNGSESVLESFLDNNKILS-KK------------------  235 (494)
T ss_pred             cccccCCChHHHHHhcccccccHHHHHHHHhCCCCcccc-CCccccHHHHHHHhchhhc-cc------------------
Confidence            25788999999998764    899999999999988764 445 999998876432110 00                  


Q ss_pred             ccCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCcccccccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhcc
Q 005556          289 LSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRN  368 (691)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~  368 (691)
                                                                              ..   +++..+.. ..+++..+ .
T Consensus       236 --------------------------------------------------------~~---~il~~l~~-~advn~~d-~  254 (494)
T PHA02989        236 --------------------------------------------------------EF---KVLNFILK-YIKINKKD-K  254 (494)
T ss_pred             --------------------------------------------------------ch---HHHHHHHh-CCCCCCCC-C
Confidence                                                                    11   11211111 23333333 5


Q ss_pred             CCChHHHHHHHcCcHHHHHHHHHHCCccccccccCCCcHHHHHHhcCChhHHHHHhcCC
Q 005556          369 KLKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVN  427 (691)
Q Consensus       369 ~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~  427 (691)
                      .|+||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+++|+.++++.|++.+
T Consensus       255 ~G~TpL~~Aa~~~~~~~v~~LL~~Gad-in~~d~~G~TpL~~A~~~~~~~iv~~LL~~~  312 (494)
T PHA02989        255 KGFNPLLISAKVDNYEAFNYLLKLGDD-IYNVSKDGDTVLTYAIKHGNIDMLNRILQLK  312 (494)
T ss_pred             CCCCHHHHHHHhcCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence            699999999999999999999999887 5688999999999999999999999999985

>PHA02798 ankyrin-like protein; Provisional

Probab=99.96  E-value=1.6e-28  Score=272.06  Aligned_cols=272  Identities=13%  Similarity=0.055  Sum_probs=211.1

Q ss_pred             ccHHHHHHHH--cCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhcc-----CCCCHHHHHHHHhccCCCCC
Q 005556           67 RHLELYRMIQ--MNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVET-----DDEATDLIDKLAQSTDVDIS  139 (691)
Q Consensus        67 ~~~~L~~Aa~--~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~-----g~~~~~iv~~Ll~~~~~~~~  139 (691)
                      ++++++.+..  .++.++|+.|++.+.+ ++.+  +..|.||||.      |+.+     +  +.++++.|+++|   ++
T Consensus        36 ~~~~~~~yl~~~~~~~~iv~~Ll~~Gad-vn~~--d~~g~TpL~~------~~~n~~~~~~--~~~iv~~Ll~~G---ad  101 (489)
T PHA02798         36 EYSIFQKYLQRDSPSTDIVKLFINLGAN-VNGL--DNEYSTPLCT------ILSNIKDYKH--MLDIVKILIENG---AD  101 (489)
T ss_pred             cchHHHHHHhCCCCCHHHHHHHHHCCCC-CCCC--CCCCCChHHH------HHHhHHhHHh--HHHHHHHHHHCC---CC
Confidence            5565554443  4578999999998775 4555  8999999999      8864     7  799999999998   54


Q ss_pred             ccccccCCCCChHHHHHHHcC---CHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCC---hHHHHHHHhcCCCCccc
Q 005556          140 ETLSCKDGGGNTVLSLCAIRG---NLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGH---KDTFEYLLEETPGRVEN  212 (691)
Q Consensus       140 ~~l~~~d~~G~TpLh~Aa~~G---~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~---~~iv~~Ll~~~~~~~~~  212 (691)
                        ++.+|..|.||||+|+..|   +.+++++|++.++++.  .++. |.||||+|++.|+   .+++++|++.+.+... 
T Consensus       102 --iN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn--~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~-  176 (489)
T PHA02798        102 --INKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTT--LLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINT-  176 (489)
T ss_pred             --CCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCcc--ccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCccc-
Confidence              7889999999999999876   7899999999999887  7888 9999999999998   9999999999987543 


Q ss_pred             cccCCCCCcHHHHHHHc----CcHHHHHHHHHhCCCCccCCCCCCCHHH-HHHcCCCccccCCcchhhhhhhhccccccc
Q 005556          213 FYCGGDGGRLLSDLIKA----NLYDVALNLLKNHPEIVHDIDSQKMALD-SLALKPYAFESGSRLGCLEGFIYKCIPVTK  287 (691)
Q Consensus       213 ~~~~~~G~t~Lh~Ai~~----g~~~iv~~Ll~~~~~~~~~~d~~~TpLh-~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~  287 (691)
                       ..+..|.||||.++..    ++.+++++|++++.+.......+.++++ +....                +        
T Consensus       177 -~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l----------------~--------  231 (489)
T PHA02798        177 -HNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSL----------------L--------  231 (489)
T ss_pred             -ccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHH----------------H--------
Confidence             2356799999998764    4799999999999887664433466655 21110                0        


Q ss_pred             cccCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCcccccccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhc
Q 005556          288 QLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANR  367 (691)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~~~~~  367 (691)
                                                                         ++....+...++++.   . ..+++..+ 
T Consensus       232 ---------------------------------------------------~~~~~~~~~i~~~l~---~-~~dvN~~d-  255 (489)
T PHA02798        232 ---------------------------------------------------YDNKRFKKNILDFIF---S-YIDINQVD-  255 (489)
T ss_pred             ---------------------------------------------------hhcccchHHHHHHHH---h-cCCCCCcC-
Confidence                                                               000011222333322   1 23344333 


Q ss_pred             cCCChHHHHHHHcCcHHHHHHHHHHCCccccccccCCCcHHHHHHhcCChhHHHHHhcCCCcccccccccCCCCc
Q 005556          368 NKLKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNN  442 (691)
Q Consensus       368 ~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~D~~G~T  442 (691)
                      ..|+||||+|+..|+.+++++|++.+++ ++.+|..|+||||+|+++++.++++.|++.+   .+++..+..+++
T Consensus       256 ~~G~TPL~~A~~~~~~~~v~~LL~~GAd-in~~d~~G~TpL~~A~~~~~~~iv~~lL~~~---~~~~~i~~~~~~  326 (489)
T PHA02798        256 ELGFNPLYYSVSHNNRKIFEYLLQLGGD-INIITELGNTCLFTAFENESKFIFNSILNKK---PNKNTISYTYYK  326 (489)
T ss_pred             cCCccHHHHHHHcCcHHHHHHHHHcCCc-ccccCCCCCcHHHHHHHcCcHHHHHHHHccC---CCHHHHHHHHHH
Confidence            5699999999999999999999999888 5689999999999999999999999999997   667666555543

>PHA02730 ankyrin-like protein; Provisional

Probab=99.96  E-value=1e-27  Score=262.39  Aligned_cols=376  Identities=13%  Similarity=0.060  Sum_probs=236.4

Q ss_pred             HHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCC---HHHHHHHHhccCCCCCccccccCCCCChHHHHHH
Q 005556           81 QSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEA---TDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCA  157 (691)
Q Consensus        81 ~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~---~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa  157 (691)
                      ..++..++...+.-..+  |..|+||||+      |+..|  +   .++|+.|+++|   ++  ++.+|..|+||||+|+
T Consensus        21 ~~~~~~~~~~~~in~~k--d~~G~TaLh~------A~~~~--~~~~~eivklLLs~G---Ad--in~kD~~G~TPLh~Aa   85 (672)
T PHA02730         21 KKIKLEIETCHNLSKHI--DRRGNNALHC------YVSNK--CDTDIKIVRLLLSRG---VE--RLCRNNEGLTPLGVYS   85 (672)
T ss_pred             HHHHHHHHHhcchhhhc--CCCCCcHHHH------HHHcC--CcCcHHHHHHHHhCC---CC--CcccCCCCCChHHHHH
Confidence            34445555443332244  8899999999      99986  5   99999999998   55  7889999999999999


Q ss_pred             HcC--CHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHH--cCChHHHHHHHhcC-CCCccc-ccc-CCCCCcHHHHHHHc
Q 005556          158 IRG--NLKASKILVKHKHELLIKQTNQ-NSLPVHLAAL--FGHKDTFEYLLEET-PGRVEN-FYC-GGDGGRLLSDLIKA  229 (691)
Q Consensus       158 ~~G--~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~--~g~~~iv~~Ll~~~-~~~~~~-~~~-~~~G~t~Lh~Ai~~  229 (691)
                      ..|  +.++|++|++.+.+..++..+. +.+|||.++.  .++.++|++|++.+ .+.... ..+ +..|.+|++.|...
T Consensus        86 ~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~  165 (672)
T PHA02730         86 KRKYVKSQIVHLLISSYSNASNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPN  165 (672)
T ss_pred             HcCCCcHHHHHHHHhcCCCCCcccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCC
Confidence            977  7999999999965442124566 9999999998  99999999999743 332221 011 24899999999999


Q ss_pred             CcHHHHHHHHHhCCCCc------c-CCCCC-CCHHHHHHcCCCccccCCcchhhhhhhhccccccccccCCCCCCCCCCC
Q 005556          230 NLYDVALNLLKNHPEIV------H-DIDSQ-KMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGD  301 (691)
Q Consensus       230 g~~~iv~~Ll~~~~~~~------~-~~d~~-~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~  301 (691)
                      ++.++|++|++.+++..      . ..+.. .|.||+....... ......++++.||.+..++               +
T Consensus       166 ~~~eIvklLi~~g~~v~g~~~~~~~~~~~~c~~~l~~~il~~~~-~~~n~~eiv~lLIs~GadI---------------N  229 (672)
T PHA02730        166 PRPEVLLWLLKSECYSTGYVFRSCMYDSDRCKNSLHYYILSHRE-SESLSKDVIKCLIDNNVSI---------------H  229 (672)
T ss_pred             CchHHHHHHHHcCCcccccccccccccCCccchhHHHHHHhhhh-hhccCHHHHHHHHHCCCCC---------------C
Confidence            99999999999999884      1 22223 4556645543222 2345678999999877544               1


Q ss_pred             CCCCCCcccCCC--CCCCC-CCCcccccc-------c-CCCcchhHHHHHHHh-------hhHHHHHHHHHHHHHHHhh-
Q 005556          302 TENGIGTTNGHS--KKSIP-YGSTQQITT-------Y-DAKWPCFKAIYAEKL-------THMRTVEIVRFICENVIWT-  362 (691)
Q Consensus       302 ~~~~~~~~~~~~--~~~~~-~~~~~~~~~-------~-~~~~~~~~~~~~~~~-------~~~~~~~lL~~l~~~~~~~-  362 (691)
                      ..+..|.++++.  +.+.. ....+.+..       + +...+++.-+.+.-.       .+..-..+++.+++..... 
T Consensus       230 ~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~  309 (672)
T PHA02730        230 GRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLI  309 (672)
T ss_pred             CCCCCCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcch
Confidence            223345555542  11100 000000000       0 001122222211110       0111112222222211110 


Q ss_pred             --hh----hhccCCCh---------------------HHHHHHHcC---cHHHHHHHHHHCCccccccccCCCcHHHHHH
Q 005556          363 --NR----ANRNKLKG---------------------ALFTATRLG---IPEFVNEFIMAYNYSALLLNSQNHGIFELAV  412 (691)
Q Consensus       363 --~~----~~~~~g~t---------------------pLh~Aa~~G---~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~A~  412 (691)
                        -.    .. ..|.+                     .||.=.+.|   +.++++.|+++|++.. . +..|+||||+|+
T Consensus       310 ~~~~~~~~~~-~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~GAdIN-~-k~~G~TpLH~Aa  386 (672)
T PHA02730        310 DVMRSITSYD-SREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDNGATMD-K-TTDNNYPLHDYF  386 (672)
T ss_pred             hhhhcccccc-ccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHCCCCCC-c-CCCCCcHHHHHH
Confidence              00    00 12222                     677766655   6999999999998854 4 479999999999


Q ss_pred             hcCC----hhHHHHHhcCCCcccccccccCCCCchhhh---hhccCCCCCCCchHHhhHHHHHHHHhhhhcCCc-hhHHH
Q 005556          413 LHRR----EKVFNLIHGVNSSYFSISLEDKSGNNILHL---TGKSEPSRHVPGAALKMQRELQWFKLAKNLVHP-QFREA  484 (691)
Q Consensus       413 ~~~~----~~iv~~Ll~~~~~~~~~n~~D~~G~TpLHl---Aa~~g~~~~v~~~al~~~~el~~~~~v~~~~~~-~~~~~  484 (691)
                      ..++    .+++++|+++| ...++|.+|.+|.||||.   |...+...    .    ..+..-.+.++-++.. .+++.
T Consensus       387 ~~nnn~i~~eIvelLIs~G-a~~dIN~kd~~G~T~Lh~~i~a~~~n~~~----~----~~e~~~~~ivk~LIs~GADINa  457 (672)
T PHA02730        387 VNNNNIVDVNVVRFIVENN-GHMAINHVSNNGRLCMYGLILSRFNNCGY----H----CYETILIDVFDILSKYMDDIDM  457 (672)
T ss_pred             HHcCCcchHHHHHHHHHcC-CCccccccccCCCchHhHHHHHHhccccc----c----ccchhHHHHHHHHHhcccchhc
Confidence            8875    79999999997 234799999999999994   33332100    0    0010011223434433 46899


Q ss_pred             hhhcCCCchhhhhHH
Q 005556          485 ENKLEQTPTEVFTKE  499 (691)
Q Consensus       485 ~N~~G~Tp~di~~~~  499 (691)
                      +|+.|+||+..+...
T Consensus       458 kD~~G~TPLh~Aa~~  472 (672)
T PHA02730        458 IDNENKTLLYYAVDV  472 (672)
T ss_pred             cCCCCCCHHHHHHHh
Confidence            999999999998654

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.96  E-value=2.1e-28  Score=256.54  Aligned_cols=209  Identities=19%  Similarity=0.188  Sum_probs=182.3

Q ss_pred             cchhhhcccccchhccCCCCHHHHHHHHhc-cCCCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC
Q 005556          104 LTIFHLIMGLLVDVETDDEATDLIDKLAQS-TDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ  182 (691)
Q Consensus       104 ~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~-~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~  182 (691)
                      .+-.+.      |+..|  ..+-|+.|++. +   . . ++..|++|.|+||+||.+++.+++++|++++++++ .....
T Consensus        45 ~~~~v~------A~q~G--~l~~v~~lve~~g---~-~-v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn-~~gG~  110 (600)
T KOG0509|consen   45 LDDIVK------ATQYG--ELETVKELVESEG---E-S-VNNPDREGVTLLHWAAINNRLDVARYLISHGADVN-AIGGV  110 (600)
T ss_pred             hhhhhh------Hhhcc--hHHHHHHHHhhcC---c-C-CCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCcc-ccCCC
Confidence            345666      99999  99999999998 5   2 2 56689999999999999999999999999999998 66667


Q ss_pred             -CCcHHHHHHHcCChHHHHHHHhcCCCCccccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCCccCCCCCCCHHHHHHc
Q 005556          183 -NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLAL  261 (691)
Q Consensus       183 -G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~Ai~~g~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~  261 (691)
                       |.||||+||++|+..+|++|+++|++...   +|.+|.||||.|+..|+.-++-+|+.++.+.... |           
T Consensus       111 l~stPLHWAar~G~~~vv~lLlqhGAdpt~---~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~-D-----------  175 (600)
T KOG0509|consen  111 LGSTPLHWAARNGHISVVDLLLQHGADPTL---KDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLR-D-----------  175 (600)
T ss_pred             CCCCcchHHHHcCcHHHHHHHHHcCCCCce---ecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCc-C-----------
Confidence             99999999999999999999999999655   8999999999999999999999999997443331 1           


Q ss_pred             CCCccccCCcchhhhhhhhccccccccccCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCcccccccCCCcchhHHHHHH
Q 005556          262 KPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAE  341 (691)
Q Consensus       262 ~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (691)
                                                                                                      
T Consensus       176 --------------------------------------------------------------------------------  175 (600)
T KOG0509|consen  176 --------------------------------------------------------------------------------  175 (600)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             HhhhHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHcCcHHHHHHHHHHCCccccccccCCCcHHHHHHhcCChhHHH
Q 005556          342 KLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFN  421 (691)
Q Consensus       342 ~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~  421 (691)
                                                .+|+||||+||.+|+...+..||+-++......|++|.||||+|+..|+.++++
T Consensus       176 --------------------------~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN~~~v~  229 (600)
T KOG0509|consen  176 --------------------------NNGRTPLMWAAYKGFALFVRRLLKFGASLLLTDDNHGNTPLHWAVVGGNLTAVK  229 (600)
T ss_pred             --------------------------CCCCCHHHHHHHhcccHHHHHHHHhcccccccccccCCchHHHHHhcCCcceEe
Confidence                                      347888888888888888889999988866444599999999999999999999


Q ss_pred             HHhcCCCcccccccccCCCCchhhhhhcc
Q 005556          422 LIHGVNSSYFSISLEDKSGNNILHLTGKS  450 (691)
Q Consensus       422 ~Ll~~~~~~~~~n~~D~~G~TpLHlAa~~  450 (691)
                      +|++.+   .+.+.+|.+|.||+.+|.+.
T Consensus       230 Ll~~g~---~~~d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  230 LLLEGG---ADLDKTNTNGKTPFDLAQER  255 (600)
T ss_pred             hhhhcC---CcccccccCCCCHHHHHHHh
Confidence            666665   88999999999999999866

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.96  E-value=4.8e-28  Score=253.77  Aligned_cols=161  Identities=19%  Similarity=0.240  Sum_probs=144.8

Q ss_pred             cHHHHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccC-
Q 005556           68 HLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKD-  146 (691)
Q Consensus        68 ~~~L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d-  146 (691)
                      ...++.|++.|+.+.|+.+++.....++..  |.+|-|+||+      ||.++  +.+++++|++++   +.  ++..+ 
T Consensus        45 ~~~~v~A~q~G~l~~v~~lve~~g~~v~~~--D~~g~tlLHW------AAiNN--rl~v~r~li~~g---ad--vn~~gG  109 (600)
T KOG0509|consen   45 LDDIVKATQYGELETVKELVESEGESVNNP--DREGVTLLHW------AAINN--RLDVARYLISHG---AD--VNAIGG  109 (600)
T ss_pred             hhhhhhHhhcchHHHHHHHHhhcCcCCCCC--CcCCccceeH------HHHcC--cHHHHHHHHHcC---CC--ccccCC
Confidence            367899999999999999999865556666  8899999999      99999  999999999998   44  56666 


Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCCCCccccccCCCCCcHHHH
Q 005556          147 GGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSD  225 (691)
Q Consensus       147 ~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~  225 (691)
                      .-|.||||+||++|++.+|++|++++++..  .+|. |.||||+||+.|+.-.|-+|+.++.+.+.   +|.+|+||||+
T Consensus       110 ~l~stPLHWAar~G~~~vv~lLlqhGAdpt--~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~---~D~~grTpLmw  184 (600)
T KOG0509|consen  110 VLGSTPLHWAARNGHISVVDLLLQHGADPT--LKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDL---RDNNGRTPLMW  184 (600)
T ss_pred             CCCCCcchHHHHcCcHHHHHHHHHcCCCCc--eecCCCCcHHHHHHHhCchHHHHHHHHhcccCCC---cCCCCCCHHHH
Confidence            678899999999999999999999999987  8899 99999999999999999999999977654   89999999999


Q ss_pred             HHHcCcHHHHHHHHHhCCCCccC
Q 005556          226 LIKANLYDVALNLLKNHPEIVHD  248 (691)
Q Consensus       226 Ai~~g~~~iv~~Ll~~~~~~~~~  248 (691)
                      |+.+|+...+..|++-++.+...
T Consensus       185 Aaykg~~~~v~~LL~f~a~~~~~  207 (600)
T KOG0509|consen  185 AAYKGFALFVRRLLKFGASLLLT  207 (600)
T ss_pred             HHHhcccHHHHHHHHhccccccc
Confidence            99999988899999987766543

>PHA02792 ankyrin-like protein; Provisional

Probab=99.95  E-value=6e-27  Score=253.50  Aligned_cols=108  Identities=14%  Similarity=0.007  Sum_probs=86.7

Q ss_pred             CChHHHHHHHcCcHHHHHHHHHHCCccccccccCC--CcHHHHHHhcCChh---HHHHHhcCCCcccccccccCCCCchh
Q 005556          370 LKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQN--HGIFELAVLHRREK---VFNLIHGVNSSYFSISLEDKSGNNIL  444 (691)
Q Consensus       370 g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G--~T~Lh~A~~~~~~~---iv~~Ll~~~~~~~~~n~~D~~G~TpL  444 (691)
                      ...++|.||..|+.++|+.|+++|++. +.+|.+|  .||||+|+.....+   ++++|++.|   +++|.+|..|+|||
T Consensus       339 ~~n~~~~Aa~~gn~eIVelLIs~GADI-N~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~G---ADIN~kD~~G~TPL  414 (631)
T PHA02792        339 HINKYFQKFDNRDPKVVEYILKNGNVV-VEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYI---DDINKIDKHGRSIL  414 (631)
T ss_pred             cchHHHHHHHcCCHHHHHHHHHcCCch-hhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcC---CccccccccCcchH
Confidence            566899999999999999999999885 5677664  69999988776654   578889998   89999999999999


Q ss_pred             hhhhccCCCCCCCchHHhhHHHHHHHHhhhhcC-CchhHHHhhhcCCCchhhhhH
Q 005556          445 HLTGKSEPSRHVPGAALKMQRELQWFKLAKNLV-HPQFREAENKLEQTPTEVFTK  498 (691)
Q Consensus       445 HlAa~~g~~~~v~~~al~~~~el~~~~~v~~~~-~~~~~~~~N~~G~Tp~di~~~  498 (691)
                      |+|+..++.+.                 ++.++ ....++.+|+.|+||+.++..
T Consensus       415 h~Aa~~~n~ei-----------------velLLs~GADIN~kD~~G~TpL~~A~~  452 (631)
T PHA02792        415 YYCIESHSVSL-----------------VEWLIDNGADINITTKYGSTCIGICVI  452 (631)
T ss_pred             HHHHHcCCHHH-----------------HHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence            99999887321                 11111 234578899999999999754

>PHA02792 ankyrin-like protein; Provisional

Probab=99.93  E-value=1.4e-24  Score=235.30  Aligned_cols=306  Identities=11%  Similarity=0.057  Sum_probs=211.9

Q ss_pred             HHH-HHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhc-cCCCCHHHHHHHHhccCCC-C--C----
Q 005556           69 LEL-YRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVE-TDDEATDLIDKLAQSTDVD-I--S----  139 (691)
Q Consensus        69 ~~L-~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~-~g~~~~~iv~~Ll~~~~~~-~--~----  139 (691)
                      .++ +.|...|+.+.|+.|++++.+ ++.+  +..|+||||+      |+. .|  +.|++++|++.|... +  .    
T Consensus        73 ~~~~~~~s~n~~lElvk~LI~~GAd-vN~~--~n~~~~~l~y------a~~~~~--~~eivk~Ll~~Gad~~~~~~~g~~  141 (631)
T PHA02792         73 DIFEYLCSDNIDIELLKLLISKGLE-INSI--KNGINIVEKY------ATTSNP--NVDVFKLLLDKGIPTCSNIQYGYK  141 (631)
T ss_pred             cHHHHHHHhcccHHHHHHHHHcCCC-cccc--cCCCCcceeE------eecCCC--ChHHHHHHHHCCCCcccccccCcc
Confidence            355 456788999999999998665 4565  7779999999      976 58  999999999998320 0  0    


Q ss_pred             ------------------------ccccccCCCCChHHHHHHHcC-------CHHHHHHHHHcCchhhhcCCCC-CCcHH
Q 005556          140 ------------------------ETLSCKDGGGNTVLSLCAIRG-------NLKASKILVKHKHELLIKQTNQ-NSLPV  187 (691)
Q Consensus       140 ------------------------~~l~~~d~~G~TpLh~Aa~~G-------~~~ivk~Ll~~~~~l~~~~~n~-G~TpL  187 (691)
                                              ..++.+|..|.||||+|+..+       +.+++++|+++++++.  ..+. |.|||
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~--~~d~~g~t~l  219 (631)
T PHA02792        142 IIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMR--YYTYREHTTL  219 (631)
T ss_pred             hhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcC--ccCCCCChHH
Confidence                                    125577888999999999998       8999999999999887  6777 99999


Q ss_pred             HHHHHcC--ChHHHHHHHhcCCCCccccccCCCCCcHHHHHHHc------Cc--HHHHHHHHHhCC--CCccC-------
Q 005556          188 HLAALFG--HKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKA------NL--YDVALNLLKNHP--EIVHD-------  248 (691)
Q Consensus       188 h~Aa~~g--~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~Ai~~------g~--~~iv~~Ll~~~~--~~~~~-------  248 (691)
                      |+|+.+.  +.|++++|++...+-       .+-...|+-=.+.      ++  ..+|..|++.+.  +....       
T Consensus       220 ~~~~~~~~i~~ei~~~L~~~~~~~-------~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~  292 (631)
T PHA02792        220 YYYVDKCDIKREIFDALFDSNYSG-------NELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNN  292 (631)
T ss_pred             HHHHHcccchHHHHHHHHhccccc-------cchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhh
Confidence            9999999  799999998853221       1112233222211      11  236666665543  11100       


Q ss_pred             ---------CCCC-CCHHHHHHcCCCccccCCcchhhhhhhhccccccccccCCCCCCCCCCCCCCCCCcccCCCCCCCC
Q 005556          249 ---------IDSQ-KMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIP  318 (691)
Q Consensus       249 ---------~d~~-~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (691)
                               .+.- +--||.=...+     ...++.++.++.+.....+.                              
T Consensus       293 ~~~~~~~~~~~~~~q~~l~~Yl~~~-----~v~ieiIK~LId~Ga~~~r~------------------------------  337 (631)
T PHA02792        293 IIISSILKRYTDSIQDLLSEYVSYH-----TVYINVIKCMIDEGATLYRF------------------------------  337 (631)
T ss_pred             hHHHHHHHHHhHHHHHHHHHHHhcC-----CccHHHHHHHHHCCCccccC------------------------------
Confidence                     0111 34455444432     24567788887765432100                              


Q ss_pred             CCCcccccccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhc-cCCChHHHHHHHcCcH---HHHHHHHHHCC
Q 005556          319 YGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANR-NKLKGALFTATRLGIP---EFVNEFIMAYN  394 (691)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~~~~~-~~g~tpLh~Aa~~G~~---eiv~~LL~~~~  394 (691)
                                   ...-..+.++..++.+.+++|.   +.+.+++..+. ..+.||||.|+..+..   ++++.|++.++
T Consensus       338 -------------~~~n~~~~Aa~~gn~eIVelLI---s~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GA  401 (631)
T PHA02792        338 -------------KHINKYFQKFDNRDPKVVEYIL---KNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYID  401 (631)
T ss_pred             -------------CcchHHHHHHHcCCHHHHHHHH---HcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCC
Confidence                         0001133445556666666554   44444444331 2357999998877665   45788888887


Q ss_pred             ccccccccCCCcHHHHHHhcCChhHHHHHhcCCCcccccccccCCCCchhhhhhc
Q 005556          395 YSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHLTGK  449 (691)
Q Consensus       395 ~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~D~~G~TpLHlAa~  449 (691)
                      + ++.+|..|+||||+|+..++.+++++|+++|   +++|.+|..|+||||+|+.
T Consensus       402 D-IN~kD~~G~TPLh~Aa~~~n~eivelLLs~G---ADIN~kD~~G~TpL~~A~~  452 (631)
T PHA02792        402 D-INKIDKHGRSILYYCIESHSVSLVEWLIDNG---ADINITTKYGSTCIGICVI  452 (631)
T ss_pred             c-cccccccCcchHHHHHHcCCHHHHHHHHHCC---CCCCCcCCCCCCHHHHHHH
Confidence            7 5689999999999999999999999999998   9999999999999999986

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.93  E-value=1.7e-24  Score=211.22  Aligned_cols=179  Identities=15%  Similarity=0.117  Sum_probs=149.8

Q ss_pred             cccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcC--ChHHHHHHHhcCCCCccccccC-CC
Q 005556          143 SCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFG--HKDTFEYLLEETPGRVENFYCG-GD  218 (691)
Q Consensus       143 ~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g--~~~iv~~Ll~~~~~~~~~~~~~-~~  218 (691)
                      +.....+.||||.|++.|+.++|+.|++.    . +..|. |.||||+|+..+  +.+++++|++.+++.+.   ++ .+
T Consensus        15 ~~~~~~~~~pL~~A~~~~~~~~vk~Li~~----~-n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~---~~~~~   86 (209)
T PHA02859         15 DYLFYRYCNPLFYYVEKDDIEGVKKWIKF----V-NDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNF---KTRDN   86 (209)
T ss_pred             HHHhhccCcHHHHHHHhCcHHHHHHHHHh----h-hccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCc---cCCCC
Confidence            34466789999999999999999999974    2 46788 999999999854  89999999999988654   44 58


Q ss_pred             CCcHHHHHHHc---CcHHHHHHHHHhCCCCccCCCCCCCHHHHHHcCCCccccCCcchhhhhhhhccccccccccCCCCC
Q 005556          219 GGRLLSDLIKA---NLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDN  295 (691)
Q Consensus       219 G~t~Lh~Ai~~---g~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~  295 (691)
                      |.||||+|+..   ++.+++++|+++++++... |                                             
T Consensus        87 g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~-d---------------------------------------------  120 (209)
T PHA02859         87 NLSALHHYLSFNKNVEPEILKILIDSGSSITEE-D---------------------------------------------  120 (209)
T ss_pred             CCCHHHHHHHhCccccHHHHHHHHHCCCCCCCc-C---------------------------------------------
Confidence            99999998763   4799999999998776542 1                                             


Q ss_pred             CCCCCCCCCCCCcccCCCCCCCCCCCcccccccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhccCCChHHH
Q 005556          296 PNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALF  375 (691)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh  375 (691)
                                                                                              ..|.||||
T Consensus       121 ------------------------------------------------------------------------~~G~TpLh  128 (209)
T PHA02859        121 ------------------------------------------------------------------------EDGKNLLH  128 (209)
T ss_pred             ------------------------------------------------------------------------CCCCCHHH
Confidence                                                                                    23677777


Q ss_pred             HHHH--cCcHHHHHHHHHHCCccccccccCCCcHHHH-HHhcCChhHHHHHhcCCCcccccccccCCCCchhhhhhccC
Q 005556          376 TATR--LGIPEFVNEFIMAYNYSALLLNSQNHGIFEL-AVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHLTGKSE  451 (691)
Q Consensus       376 ~Aa~--~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~-A~~~~~~~iv~~Ll~~~~~~~~~n~~D~~G~TpLHlAa~~g  451 (691)
                      .|+.  .|+.++++.|++.+.+ ++.+|.+|+||||. |+..++.+++++|++.|   ++++.+|..|.||||+|+..+
T Consensus       129 ~a~~~~~~~~~iv~~Li~~gad-in~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~G---adi~~~d~~g~tpl~la~~~~  203 (209)
T PHA02859        129 MYMCNFNVRINVIKLLIDSGVS-FLNKDFDNNNILYSYILFHSDKKIFDFLTSLG---IDINETNKSGYNCYDLIKFRN  203 (209)
T ss_pred             HHHHhccCCHHHHHHHHHcCCC-cccccCCCCcHHHHHHHhcCCHHHHHHHHHcC---CCCCCCCCCCCCHHHHHhhhh
Confidence            7765  4689999999999877 46789999999996 56788999999999998   999999999999999998764

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.91  E-value=1.3e-22  Score=236.19  Aligned_cols=233  Identities=15%  Similarity=0.088  Sum_probs=170.9

Q ss_pred             CCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCCCCChHHH-HHHHcCCHHHHHHHHHcCchhhhcCC
Q 005556          102 RSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLS-LCAIRGNLKASKILVKHKHELLIKQT  180 (691)
Q Consensus       102 ~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh-~Aa~~G~~~ivk~Ll~~~~~l~~~~~  180 (691)
                      .++++++.      |++.|  +.+.|+.+++.+  ...+ ++..|..|.|||| .|+..++.+++++|++.+.      .
T Consensus        16 ~~~~~~l~------A~~~g--~~~~v~~lL~~~--~~~~-in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~------~   78 (743)
T TIGR00870        16 DEEKAFLP------AAERG--DLASVYRDLEEP--KKLN-INCPDRLGRSALFVAAIENENLELTELLLNLSC------R   78 (743)
T ss_pred             HHHHHHHH------HHHcC--CHHHHHHHhccc--cccC-CCCcCccchhHHHHHHHhcChHHHHHHHHhCCC------C
Confidence            46788889      99999  999999999884  1233 7888999999999 8889999999999998754      4


Q ss_pred             CC-CCcHHHHHHHcC---ChHHHHHHHhcCCCCc-------cccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCCccCC
Q 005556          181 NQ-NSLPVHLAALFG---HKDTFEYLLEETPGRV-------ENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDI  249 (691)
Q Consensus       181 n~-G~TpLh~Aa~~g---~~~iv~~Ll~~~~~~~-------~~~~~~~~G~t~Lh~Ai~~g~~~iv~~Ll~~~~~~~~~~  249 (691)
                      +. |+||||.|+..+   ..++++.+........       .....+..|.||||+|+.+|+.++++.|++++++++...
T Consensus        79 ~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~  158 (743)
T TIGR00870        79 GAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARA  158 (743)
T ss_pred             CCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCc
Confidence            56 999999999732   2334444444432211       001134579999999999999999999999998876422


Q ss_pred             CCCCCHHHHHHcCCCccccCCcchhhhhhhhccccccccccCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCcccccccC
Q 005556          250 DSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYD  329 (691)
Q Consensus       250 d~~~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (691)
                      +...      +...                                                                  
T Consensus       159 ~~~~------~~~~------------------------------------------------------------------  166 (743)
T TIGR00870       159 CGDF------FVKS------------------------------------------------------------------  166 (743)
T ss_pred             CCch------hhcC------------------------------------------------------------------
Confidence            1110      0000                                                                  


Q ss_pred             CCcchhHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHcCcHHHHHHHHHHCCccccccccCCCcHHH
Q 005556          330 AKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFE  409 (691)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh  409 (691)
                                                      ........|.||||.|+..|+.++++.|++.+++ ++.+|+.|+||||
T Consensus       167 --------------------------------~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gad-in~~d~~g~T~Lh  213 (743)
T TIGR00870       167 --------------------------------QGVDSFYHGESPLNAAACLGSPSIVALLSEDPAD-ILTADSLGNTLLH  213 (743)
T ss_pred             --------------------------------CCCCcccccccHHHHHHHhCCHHHHHHHhcCCcc-hhhHhhhhhHHHH
Confidence                                            0000003478999999999999999999988765 5688999999999


Q ss_pred             HHHhcC---------ChhHHHHHhcCCCccccc----ccccCCCCchhhhhhccCCCCCC
Q 005556          410 LAVLHR---------REKVFNLIHGVNSSYFSI----SLEDKSGNNILHLTGKSEPSRHV  456 (691)
Q Consensus       410 ~A~~~~---------~~~iv~~Ll~~~~~~~~~----n~~D~~G~TpLHlAa~~g~~~~v  456 (691)
                      +|+..+         ...+.+++++.+....+.    +.+|++|.||||+|+..|+.+.+
T Consensus       214 ~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~  273 (743)
T TIGR00870       214 LLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLF  273 (743)
T ss_pred             HHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHH
Confidence            999986         234566666654222233    77899999999999999986443

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]

Probab=99.91  E-value=2.1e-24  Score=228.65  Aligned_cols=250  Identities=20%  Similarity=0.211  Sum_probs=206.8

Q ss_pred             cHHHHHHHHcCCHHHHHHHHhcCh------------hhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccC
Q 005556           68 HLELYRMIQMNDWQSVDGFVQSNT------------DILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTD  135 (691)
Q Consensus        68 ~~~L~~Aa~~G~~~~v~~ll~~~~------------~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~  135 (691)
                      .+.|..|++.||.+.+..+|+...            +..+..  |.+|-|+||.      ||.+|  +.++++.|+++. 
T Consensus         4 ~qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~q--d~~gfTalhh------a~Lng--~~~is~llle~e-   72 (854)
T KOG0507|consen    4 KQELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQ--DYSGFTLLHH------AVLNG--QNQISKLLLDYE-   72 (854)
T ss_pred             hhhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCcccccc--CccchhHHHH------HHhcC--chHHHHHHhcch-
Confidence            367899999999999999998621            223343  7789999999      99999  999999999985 


Q ss_pred             CCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCCCCccccc
Q 005556          136 VDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFY  214 (691)
Q Consensus       136 ~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~  214 (691)
                        +.  ++..|..|.+|||+||+.|+.++||.++.....+  +..+. |+||||.||.+||.++|.+|++++++..   .
T Consensus        73 --a~--ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~--na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~---i  143 (854)
T KOG0507|consen   73 --AL--LDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDIL--NAVNIENETPLHLAAQHGHLEVVFYLLKKNADPF---I  143 (854)
T ss_pred             --hh--hhhhhccCcceEEehhhcCcchHHHHHHhcccCC--CcccccCcCccchhhhhcchHHHHHHHhcCCCcc---c
Confidence              32  7888999999999999999999999999988544  48888 9999999999999999999999999854   4


Q ss_pred             cCCCCCcHHHHHHHcCcHHHHHHHHHhCCCCccCCCCCCCHHHHHHcCCCccccCCcchhhhhhhhccccccccccCCCC
Q 005556          215 CGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTND  294 (691)
Q Consensus       215 ~~~~G~t~Lh~Ai~~g~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~  294 (691)
                      +|+.+.|+|-.|++.|..++++.|++.  ++...... .++                                      +
T Consensus       144 ~nns~~t~ldlA~qfgr~~Vvq~ll~~--~~~~~~~~-~~~--------------------------------------~  182 (854)
T KOG0507|consen  144 RNNSKETVLDLASRFGRAEVVQMLLQK--KFPVQSSL-RVG--------------------------------------D  182 (854)
T ss_pred             cCcccccHHHHHHHhhhhHHHHHHhhh--ccchhhcc-cCC--------------------------------------C
Confidence            899999999999999999999999987  22211000 000                                      0


Q ss_pred             CCCCCCCCCCCCCcccCCCCCCCCCCCcccccccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhccCCChHH
Q 005556          295 NPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGAL  374 (691)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpL  374 (691)
                                                                                          .... ..+-+|+
T Consensus       183 --------------------------------------------------------------------~~~~-~~~~~pl  193 (854)
T KOG0507|consen  183 --------------------------------------------------------------------IKRP-FPAIYPL  193 (854)
T ss_pred             --------------------------------------------------------------------CCCC-CCCcCCc
Confidence                                                                                0000 2367899


Q ss_pred             HHHHHcCcHHHHHHHHHHCCccccccccCCCcHHHHHHhcCChhHHHHHhcCCCcccccccccCCCCchhhhhhccCC
Q 005556          375 FTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHLTGKSEP  452 (691)
Q Consensus       375 h~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~D~~G~TpLHlAa~~g~  452 (691)
                      |.|+++||.++++.|++.+-+. +...++| |+||.|+.+|+.++|.+|++.|   ....++|.+|.|+|.+-...-.
T Consensus       194 Hlaakngh~~~~~~ll~ag~di-n~~t~~g-talheaalcgk~evvr~ll~~g---in~h~~n~~~qtaldil~d~~~  266 (854)
T KOG0507|consen  194 HLAAKNGHVECMQALLEAGFDI-NYTTEDG-TALHEAALCGKAEVVRFLLEIG---INTHIKNQHGQTALDIIIDLQE  266 (854)
T ss_pred             chhhhcchHHHHHHHHhcCCCc-ccccccc-hhhhhHhhcCcchhhhHHHhhc---cccccccccchHHHHHHHhcch
Confidence            9999999999999999998774 4555554 9999999999999999999998   8999999999999998765543

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.91  E-value=3.2e-23  Score=202.24  Aligned_cols=176  Identities=12%  Similarity=0.095  Sum_probs=148.5

Q ss_pred             hccHHHHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCcccccc
Q 005556           66 RRHLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCK  145 (691)
Q Consensus        66 ~~~~~L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~  145 (691)
                      +.++|||.|+..|+.+.|+.|++.    .+..  +..|.||||+      |+..+..+.++++.|++.|   ++  ++.+
T Consensus        20 ~~~~pL~~A~~~~~~~~vk~Li~~----~n~~--~~~g~TpLh~------a~~~~~~~~eiv~~Ll~~g---ad--vn~~   82 (209)
T PHA02859         20 RYCNPLFYYVEKDDIEGVKKWIKF----VNDC--NDLYETPIFS------CLEKDKVNVEILKFLIENG---AD--VNFK   82 (209)
T ss_pred             ccCcHHHHHHHhCcHHHHHHHHHh----hhcc--CccCCCHHHH------HHHcCCCCHHHHHHHHHCC---CC--CCcc
Confidence            368999999999999999999864    2333  8889999999      9874311899999999998   54  6667


Q ss_pred             C-CCCChHHHHHHHc---CCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHH--cCChHHHHHHHhcCCCCccccccCCC
Q 005556          146 D-GGGNTVLSLCAIR---GNLKASKILVKHKHELLIKQTNQ-NSLPVHLAAL--FGHKDTFEYLLEETPGRVENFYCGGD  218 (691)
Q Consensus       146 d-~~G~TpLh~Aa~~---G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~--~g~~~iv~~Ll~~~~~~~~~~~~~~~  218 (691)
                      + ..|.||||+|+..   ++.+++++|+++++++.  .+|. |.||||+|+.  .++.+++++|++.+.+.+.   +|.+
T Consensus        83 ~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin--~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~---~d~~  157 (209)
T PHA02859         83 TRDNNLSALHHYLSFNKNVEPEILKILIDSGSSIT--EEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLN---KDFD  157 (209)
T ss_pred             CCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCC--CcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccc---ccCC
Confidence            6 5899999998864   58999999999999887  7888 9999999986  4689999999999988544   7999


Q ss_pred             CCcHHHH-HHHcCcHHHHHHHHHhCCCCccCCCCCCCHHHHHHcCC
Q 005556          219 GGRLLSD-LIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKP  263 (691)
Q Consensus       219 G~t~Lh~-Ai~~g~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~  263 (691)
                      |.||||. |+..++.+++++|++.+.++....+.+.||||+|+.+.
T Consensus       158 g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~~g~tpl~la~~~~  203 (209)
T PHA02859        158 NNNILYSYILFHSDKKIFDFLTSLGIDINETNKSGYNCYDLIKFRN  203 (209)
T ss_pred             CCcHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhhh
Confidence            9999995 56788999999999999988764444499999999763

>PF13962 PGG: Domain of unknown function

Probab=99.91  E-value=9.1e-24  Score=183.49  Aligned_cols=108  Identities=41%  Similarity=0.691  Sum_probs=96.4

Q ss_pred             hHhHHHhhhhhHHHHHHHHHHHhhhhccCCCCCCC----CCccccCCCc-hhhHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 005556          508 EKWMKETASSCSVVAALIVTVVFAASFTVPGGHDG----RGIPNLLHEP-SFMIFAISDMLALFSSITSVLMFLGILTSQ  582 (691)
Q Consensus       508 ~~~~~~~~~~~~vva~Liatv~faa~~t~Pgg~~~----~G~~~~~~~~-~f~~f~~~~~~a~~~S~~~~~~~~~~~~~~  582 (691)
                      +||++++++++++||+|||||||||++|||||+++    .|+|++.+++ .|.+|+++|++||++|+++++++++.+   
T Consensus         1 ~~~~~~~~~~llVvAtLIATvtF~A~~tpPGG~~~~~~~~G~~il~~~~~~f~~F~~~nt~af~~S~~~i~~l~~~~---   77 (113)
T PF13962_consen    1 KKWLEDTRNSLLVVATLIATVTFQAAFTPPGGYWQDDDDAGTPILAKKPSAFKAFLISNTIAFFSSLAAIFLLISGL---   77 (113)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccCCCCchhccccchhhhHHHHHHHHHHHHHHHHHHHHHHh---
Confidence            47899999999999999999999999999999976    6999998888 999999999999999999998877422   


Q ss_pred             hhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhh
Q 005556          583 YAEEEFLESLPRMLIIGLVTLFFSIASMMVAFGATVHIS  621 (691)
Q Consensus       583 ~~~~~~~~~~~~~l~~~~~~l~~s~~~m~~af~~~~~~v  621 (691)
                         .++.+..++.+.++..++++++.+|++||++|+|+|
T Consensus        78 ---~~~~~~~~~~~~~~~~~~~~a~~~~~~Af~~g~~~v  113 (113)
T PF13962_consen   78 ---DDFRRFLRRYLLIASVLMWIALISMMVAFAAGIYLV  113 (113)
T ss_pred             ---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence               345566667788999999999999999999999875

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]

Probab=99.90  E-value=8.7e-24  Score=192.22  Aligned_cols=230  Identities=15%  Similarity=0.070  Sum_probs=167.1

Q ss_pred             HHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCCCCC
Q 005556           71 LYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGN  150 (691)
Q Consensus        71 L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~  150 (691)
                      +-.+...|+.+.++..+.-+++.+...  +++|+.++|.      |+-+|  +.+.+..++..+   .+  .+..+-.+.
T Consensus        66 ~~~~~~s~nsd~~v~s~~~~~~~~~~t--~p~g~~~~~v------~ap~~--s~~k~sttltN~---~r--gnevs~~p~  130 (296)
T KOG0502|consen   66 LTVAVRSGNSDVAVQSAQLDPDAIDET--DPEGWSALLV------AAPCG--SVDKVSTTLTNG---AR--GNEVSLMPW  130 (296)
T ss_pred             cchhhhcCCcHHHHHhhccCCCCCCCC--Cchhhhhhhh------cCCCC--Ccceeeeeeccc---cc--CCccccccC
Confidence            445667777777777776666665554  6778888888      88888  888887777776   33  345677778


Q ss_pred             hHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCCCCccccccCCCCCcHHHHHHHc
Q 005556          151 TVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKA  229 (691)
Q Consensus       151 TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~Ai~~  229 (691)
                      +|+.+++...+++.+..+.+.   .+ +..|+ |.|||.||+++|+.++|++|++.+++...   ..+...++|..|++.
T Consensus       131 s~~slsVhql~L~~~~~~~~n---~V-N~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~---lgk~resALsLAt~g  203 (296)
T KOG0502|consen  131 SPLSLSVHQLHLDVVDLLVNN---KV-NACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDA---LGKYRESALSLATRG  203 (296)
T ss_pred             ChhhHHHHHHHHHHHHHHhhc---cc-cCccccCchHhHHHHhcCchHHHHHHHHcCCChhh---hhhhhhhhHhHHhcC
Confidence            888888877777777766653   23 56677 88888888888888888888888777544   466677788888888


Q ss_pred             CcHHHHHHHHHhCCCCccCCCCCCCHHHHHHcCCCccccCCcchhhhhhhhccccccccccCCCCCCCCCCCCCCCCCcc
Q 005556          230 NLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTT  309 (691)
Q Consensus       230 g~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~  309 (691)
                      |+.++|++|+.++++++...                                                            
T Consensus       204 gytdiV~lLL~r~vdVNvyD------------------------------------------------------------  223 (296)
T KOG0502|consen  204 GYTDIVELLLTREVDVNVYD------------------------------------------------------------  223 (296)
T ss_pred             ChHHHHHHHHhcCCCcceec------------------------------------------------------------
Confidence            88888888888777665421                                                            


Q ss_pred             cCCCCCCCCCCCcccccccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHcCcHHHHHHH
Q 005556          310 NGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEF  389 (691)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~L  389 (691)
                                                                                -+|-|||.+|++.|+.++|+.|
T Consensus       224 ----------------------------------------------------------wNGgTpLlyAvrgnhvkcve~L  245 (296)
T KOG0502|consen  224 ----------------------------------------------------------WNGGTPLLYAVRGNHVKCVESL  245 (296)
T ss_pred             ----------------------------------------------------------cCCCceeeeeecCChHHHHHHH
Confidence                                                                      2366777778888888888888


Q ss_pred             HHHCCccccccccCCCcHHHHHHhcCChhHHHHHhcCCCcccccccccCCCCchhh
Q 005556          390 IMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILH  445 (691)
Q Consensus       390 L~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~D~~G~TpLH  445 (691)
                      |+.+++. +..|..|.+++..|+..|.. +|+.++++-   .+.+.+|+.-.||||
T Consensus       246 l~sGAd~-t~e~dsGy~~mdlAValGyr-~Vqqvie~h---~lkl~Q~~~~~~~~~  296 (296)
T KOG0502|consen  246 LNSGADV-TQEDDSGYWIMDLAVALGYR-IVQQVIEKH---ALKLCQDSEKRTPLH  296 (296)
T ss_pred             HhcCCCc-ccccccCCcHHHHHHHhhhH-HHHHHHHHH---HHHHhhcccCCCCCC
Confidence            8887774 46677888888888887776 677777663   777777877777776

>PHA02795 ankyrin-like protein; Provisional

Probab=99.90  E-value=8.7e-23  Score=213.81  Aligned_cols=216  Identities=10%  Similarity=0.001  Sum_probs=171.1

Q ss_pred             cCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCcccc------ccCCCCC
Q 005556           77 MNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLS------CKDGGGN  150 (691)
Q Consensus        77 ~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~------~~d~~G~  150 (691)
                      ..-.+.+-+++-..+..++.+  +.+|     +      |+..+  ..|++++|+.++   ..  ++      .++..++
T Consensus        58 ~~~~~~~~~~~~~~~~~i~~~--~~~~-----~------~~~~~--~k~~~~~l~s~~---~~--~~~~~~~~~~~~~~~  117 (437)
T PHA02795         58 CDPVDVLYDYFRIHRDNIDQY--IVDR-----L------FAYIT--YKDIISALVSKN---YM--EDIFSIIIKNCNSVQ  117 (437)
T ss_pred             CCHHHHHHHHHHHcCcchhhh--hhhh-----H------Hhhcc--hHHHHHHHHhcc---cc--cchhhhhhhcccccc
Confidence            334455544444444445555  4444     7      99999  999999999998   43  22      5788899


Q ss_pred             hHHHHHHH--cCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCCCCccc---cccCCCCCcHHH
Q 005556          151 TVLSLCAI--RGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVEN---FYCGGDGGRLLS  224 (691)
Q Consensus       151 TpLh~Aa~--~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~---~~~~~~G~t~Lh  224 (691)
                      |+||+|+.  .|+.++|++|+++|+++.  .  . +.||||.|+..|+.+++++|++++++....   +..+..|.|++|
T Consensus       118 ~~L~~~~~n~~n~~eiV~~LI~~GADIn--~--~~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~  193 (437)
T PHA02795        118 DLLLYYLSNAYVEIDIVDFMVDHGAVIY--K--IECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGF  193 (437)
T ss_pred             HHHHHHHHhcCCCHHHHHHHHHCCCCCC--C--CCCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhH
Confidence            99999998  899999999999999887  2  4 789999999999999999999999743211   011245789999


Q ss_pred             HHHHcCcHHHHHHHHHhCCCCccCCCCCCCHHHHHHcCCCccccCCcchhhhhhhhccccccccccCCCCCCCCCCCCCC
Q 005556          225 DLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTEN  304 (691)
Q Consensus       225 ~Ai~~g~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~  304 (691)
                      .|...++.+++++|++++++++.. |                                                      
T Consensus       194 ~a~~~~~~eIve~LIs~GADIN~k-D------------------------------------------------------  218 (437)
T PHA02795        194 LVDEPTVLEIYKLCIPYIEDINQL-D------------------------------------------------------  218 (437)
T ss_pred             HHHhcCHHHHHHHHHhCcCCcCcC-C------------------------------------------------------
Confidence            999999999999999998776542 1                                                      


Q ss_pred             CCCcccCCCCCCCCCCCcccccccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHcCcHH
Q 005556          305 GIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPE  384 (691)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~e  384 (691)
                                                                                     ..|.||||+|+..|+.+
T Consensus       219 ---------------------------------------------------------------~~G~TpLh~Aa~~g~~e  235 (437)
T PHA02795        219 ---------------------------------------------------------------AGGRTLLYRAIYAGYID  235 (437)
T ss_pred             ---------------------------------------------------------------CCCCCHHHHHHHcCCHH
Confidence                                                                           23789999999999999


Q ss_pred             HHHHHHHHCCccccccccCCCcHHHHHHhcCC--------hhHHHHHhcCCCcccccccccC
Q 005556          385 FVNEFIMAYNYSALLLNSQNHGIFELAVLHRR--------EKVFNLIHGVNSSYFSISLEDK  438 (691)
Q Consensus       385 iv~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~--------~~iv~~Ll~~~~~~~~~n~~D~  438 (691)
                      +++.|++.+++ ++.+|..|+||||+|+.+|+        .+++++|+++|   ++++..+.
T Consensus       236 iVelLL~~GAd-IN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~g---adI~~~~~  293 (437)
T PHA02795        236 LVSWLLENGAN-VNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREP---LSIDCIKL  293 (437)
T ss_pred             HHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCC---CCCCchhH
Confidence            99999999887 46889999999999999984        58999999997   66665443

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.89  E-value=2.8e-22  Score=234.63  Aligned_cols=178  Identities=16%  Similarity=0.067  Sum_probs=155.1

Q ss_pred             cCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCCCCccccccCCCCCcHH
Q 005556          145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLL  223 (691)
Q Consensus       145 ~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~L  223 (691)
                      .+..+.++||.||..|+.++++.|++.+.+++  ..|. |.||||+||..|+.+++++|++++++.+   .+|.+|.|||
T Consensus       521 ~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n--~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin---~~d~~G~TpL  595 (823)
T PLN03192        521 DDPNMASNLLTVASTGNAALLEELLKAKLDPD--IGDSKGRTPLHIAASKGYEDCVLVLLKHACNVH---IRDANGNTAL  595 (823)
T ss_pred             CCccchhHHHHHHHcCCHHHHHHHHHCCCCCC--CCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCC---CcCCCCCCHH
Confidence            45567899999999999999999999998876  7788 9999999999999999999999988754   3799999999


Q ss_pred             HHHHHcCcHHHHHHHHHhCCCCccCCCCCCCHHHHHHcCCCccccCCcchhhhhhhhccccccccccCCCCCCCCCCCCC
Q 005556          224 SDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTE  303 (691)
Q Consensus       224 h~Ai~~g~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~  303 (691)
                      |.|+..|+.++++.|++.+.....                                                        
T Consensus       596 ~~A~~~g~~~iv~~L~~~~~~~~~--------------------------------------------------------  619 (823)
T PLN03192        596 WNAISAKHHKIFRILYHFASISDP--------------------------------------------------------  619 (823)
T ss_pred             HHHHHhCCHHHHHHHHhcCcccCc--------------------------------------------------------
Confidence            999999999999999865321100                                                        


Q ss_pred             CCCCcccCCCCCCCCCCCcccccccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHcCcH
Q 005556          304 NGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIP  383 (691)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~  383 (691)
                                                                                      ..+.+|||.||..|+.
T Consensus       620 ----------------------------------------------------------------~~~~~~L~~Aa~~g~~  635 (823)
T PLN03192        620 ----------------------------------------------------------------HAAGDLLCTAAKRNDL  635 (823)
T ss_pred             ----------------------------------------------------------------ccCchHHHHHHHhCCH
Confidence                                                                            1256899999999999


Q ss_pred             HHHHHHHHHCCccccccccCCCcHHHHHHhcCChhHHHHHhcCCCcccccccccCCC-CchhhhhhccC
Q 005556          384 EFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSG-NNILHLTGKSE  451 (691)
Q Consensus       384 eiv~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~D~~G-~TpLHlAa~~g  451 (691)
                      ++++.|++.+++ ++.+|.+|+||||+|+..|+.+++++|+++|   ++++.+|..| .||++++....
T Consensus       636 ~~v~~Ll~~Gad-in~~d~~G~TpLh~A~~~g~~~iv~~Ll~~G---Adv~~~~~~g~~t~~~l~~~~~  700 (823)
T PLN03192        636 TAMKELLKQGLN-VDSEDHQGATALQVAMAEDHVDMVRLLIMNG---ADVDKANTDDDFSPTELRELLQ  700 (823)
T ss_pred             HHHHHHHHCCCC-CCCCCCCCCCHHHHHHHCCcHHHHHHHHHcC---CCCCCCCCCCCCCHHHHHHHHH
Confidence            999999999887 4688999999999999999999999999998   9999999998 99999886543

>PHA02795 ankyrin-like protein; Provisional

Probab=99.89  E-value=2.4e-22  Score=210.55  Aligned_cols=194  Identities=10%  Similarity=-0.068  Sum_probs=162.1

Q ss_pred             HHHHhccCCCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhh----hcCCCC-CCcHHHHHHH--cCChHHHH
Q 005556          128 DKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELL----IKQTNQ-NSLPVHLAAL--FGHKDTFE  200 (691)
Q Consensus       128 ~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~----~~~~n~-G~TpLh~Aa~--~g~~~iv~  200 (691)
                      ++++.+|   ..  ++..+.+|     +|+..+..+++++|+.++.+.+    +-..++ ++|+||+|+.  .|+.++|+
T Consensus        66 ~~~~~~~---~~--i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~  135 (437)
T PHA02795         66 DYFRIHR---DN--IDQYIVDR-----LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVD  135 (437)
T ss_pred             HHHHHcC---cc--hhhhhhhh-----HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHH
Confidence            5666666   32  56666666     9999999999999999988733    014556 9999999999  99999999


Q ss_pred             HHHhcCCCCccccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCCccCCCCCCCHHHHHHcCCCccccCCcchhhhhhhh
Q 005556          201 YLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIY  280 (691)
Q Consensus       201 ~Ll~~~~~~~~~~~~~~~G~t~Lh~Ai~~g~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~~~f~s~~~l~~~~~li~  280 (691)
                      +|+++|++...     .++.||||.|+..++.+++++|++++.+...   ...+|++-                      
T Consensus       136 ~LI~~GADIn~-----~~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n---~~~~~l~~----------------------  185 (437)
T PHA02795        136 FMVDHGAVIYK-----IECLNAYFRGICKKESSVVEFILNCGIPDEN---DVKLDLYK----------------------  185 (437)
T ss_pred             HHHHCCCCCCC-----CCCCCHHHHHHHcCcHHHHHHHHhcCCcccc---cccchhhh----------------------
Confidence            99999998533     3568999999999999999999999864211   11233321                      


Q ss_pred             ccccccccccCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCcccccccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHH
Q 005556          281 KCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVI  360 (691)
Q Consensus       281 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~l~~~~~  360 (691)
                                                                                                      
T Consensus       186 --------------------------------------------------------------------------------  185 (437)
T PHA02795        186 --------------------------------------------------------------------------------  185 (437)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhhhhhccCCChHHHHHHHcCcHHHHHHHHHHCCccccccccCCCcHHHHHHhcCChhHHHHHhcCCCcccccccccCCC
Q 005556          361 WTNRANRNKLKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSG  440 (691)
Q Consensus       361 ~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~D~~G  440 (691)
                             ..+.||+|.|+..|+.|+++.|++++++ ++.+|..|+||||+|+.+|+.+++++|++.|   +++|.+|..|
T Consensus       186 -------~~~~t~l~~a~~~~~~eIve~LIs~GAD-IN~kD~~G~TpLh~Aa~~g~~eiVelLL~~G---AdIN~~d~~G  254 (437)
T PHA02795        186 -------IIQYTRGFLVDEPTVLEIYKLCIPYIED-INQLDAGGRTLLYRAIYAGYIDLVSWLLENG---ANVNAVMSNG  254 (437)
T ss_pred             -------hhccchhHHHHhcCHHHHHHHHHhCcCC-cCcCCCCCCCHHHHHHHcCCHHHHHHHHHCC---CCCCCcCCCC
Confidence                   1157899999999999999999999887 5789999999999999999999999999998   9999999999


Q ss_pred             CchhhhhhccCC
Q 005556          441 NNILHLTGKSEP  452 (691)
Q Consensus       441 ~TpLHlAa~~g~  452 (691)
                      +||||+|+..|+
T Consensus       255 ~TpLh~Aa~~g~  266 (437)
T PHA02795        255 YTCLDVAVDRGS  266 (437)
T ss_pred             CCHHHHHHHcCC
Confidence            999999999986

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]

Probab=99.88  E-value=8.8e-23  Score=185.70  Aligned_cols=238  Identities=16%  Similarity=0.104  Sum_probs=202.1

Q ss_pred             HHHHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCCC
Q 005556           69 LELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGG  148 (691)
Q Consensus        69 ~~L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~  148 (691)
                      .+++.++..|-.+--..+.......     .+..|+.-+-.      |.+.|  +.+++..++...   ++. ..-.|..
T Consensus        33 a~~~~~~~m~~t~p~~~l~~~~s~~-----~~~lge~~~~~------~~~s~--nsd~~v~s~~~~---~~~-~~~t~p~   95 (296)
T KOG0502|consen   33 AELFEQVEMGTTEPRCALTAEISAL-----RNALGESLLTV------AVRSG--NSDVAVQSAQLD---PDA-IDETDPE   95 (296)
T ss_pred             HHHHHHhhccccchhHHHHHHHHHH-----HHhcCCcccch------hhhcC--CcHHHHHhhccC---CCC-CCCCCch
Confidence            6688888888776666666543333     25668888888      99999  999998888776   444 5557888


Q ss_pred             CChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCCCCccccccCCCCCcHHHHHH
Q 005556          149 GNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLI  227 (691)
Q Consensus       149 G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~Ai  227 (691)
                      |+.++|.|+-.|+.+.+..++.++...+  ..+- +.+|+.+++...+.+++..+.+..-+     .+|+.|.|||.+|+
T Consensus        96 g~~~~~v~ap~~s~~k~sttltN~~rgn--evs~~p~s~~slsVhql~L~~~~~~~~n~VN-----~~De~GfTpLiWAa  168 (296)
T KOG0502|consen   96 GWSALLVAAPCGSVDKVSTTLTNGARGN--EVSLMPWSPLSLSVHQLHLDVVDLLVNNKVN-----ACDEFGFTPLIWAA  168 (296)
T ss_pred             hhhhhhhcCCCCCcceeeeeecccccCC--ccccccCChhhHHHHHHHHHHHHHHhhcccc-----CccccCchHhHHHH
Confidence            9999999999999999999999887665  5566 99999999999999999888766433     48999999999999


Q ss_pred             HcCcHHHHHHHHHhCCCCccCCCCCCCHHHHHHcCCCccccCCcchhhhhhhhccccccccccCCCCCCCCCCCCCCCCC
Q 005556          228 KANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIG  307 (691)
Q Consensus       228 ~~g~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~  307 (691)
                      ..|++.+|++|++.+++....           .                                               
T Consensus       169 a~G~i~vV~fLL~~GAdp~~l-----------g-----------------------------------------------  190 (296)
T KOG0502|consen  169 AKGHIPVVQFLLNSGADPDAL-----------G-----------------------------------------------  190 (296)
T ss_pred             hcCchHHHHHHHHcCCChhhh-----------h-----------------------------------------------
Confidence            999999999999998764321           0                                               


Q ss_pred             cccCCCCCCCCCCCcccccccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHcCcHHHHH
Q 005556          308 TTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVN  387 (691)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~  387 (691)
                                                                                  ....++|.+|++.|.++||+
T Consensus       191 ------------------------------------------------------------k~resALsLAt~ggytdiV~  210 (296)
T KOG0502|consen  191 ------------------------------------------------------------KYRESALSLATRGGYTDIVE  210 (296)
T ss_pred             ------------------------------------------------------------hhhhhhHhHHhcCChHHHHH
Confidence                                                                        11368999999999999999


Q ss_pred             HHHHHCCccccccccCCCcHHHHHHhcCChhHHHHHhcCCCcccccccccCCCCchhhhhhccCC
Q 005556          388 EFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHLTGKSEP  452 (691)
Q Consensus       388 ~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~D~~G~TpLHlAa~~g~  452 (691)
                      .||++.++ +|.-|-+|-|||.+|++.++.++++.|+..|   ++++..|..|++++.+|+..|.
T Consensus       211 lLL~r~vd-VNvyDwNGgTpLlyAvrgnhvkcve~Ll~sG---Ad~t~e~dsGy~~mdlAValGy  271 (296)
T KOG0502|consen  211 LLLTREVD-VNVYDWNGGTPLLYAVRGNHVKCVESLLNSG---ADVTQEDDSGYWIMDLAVALGY  271 (296)
T ss_pred             HHHhcCCC-cceeccCCCceeeeeecCChHHHHHHHHhcC---CCcccccccCCcHHHHHHHhhh
Confidence            99999998 4688999999999999999999999999998   9999999999999999999997

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]

Probab=99.88  E-value=1.7e-22  Score=214.20  Aligned_cols=249  Identities=19%  Similarity=0.157  Sum_probs=194.0

Q ss_pred             ccchhccCCCCHHHHHHHHhccCC--------CCCccccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-C
Q 005556          113 LLVDVETDDEATDLIDKLAQSTDV--------DISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-N  183 (691)
Q Consensus       113 l~~Aa~~g~~~~~iv~~Ll~~~~~--------~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G  183 (691)
                      |..|+..|  +.+.+..||+....        ...+-.+.+|.+|.|+||.||.+|+.+++++|++..+-+.  ..+. |
T Consensus         7 l~~a~ka~--d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ld--l~d~kg   82 (854)
T KOG0507|consen    7 LIDACKAG--DYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLD--LCDTKG   82 (854)
T ss_pred             HHHhhhcc--cHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhh--hhhccC
Confidence            55699999  99999999987521        1122377889999999999999999999999999888665  5567 9


Q ss_pred             CcHHHHHHHcCChHHHHHHHhcCCCCccccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCCccCCCCCCCHHHHHHcCC
Q 005556          184 SLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKP  263 (691)
Q Consensus       184 ~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~Ai~~g~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~  263 (691)
                      .+|||+|+..|+.++|+.|+..+...+   ..+..|.||||.|+..|+.|++.+|++++.+-....+.            
T Consensus        83 ~~plhlaaw~g~~e~vkmll~q~d~~n---a~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns------------  147 (854)
T KOG0507|consen   83 ILPLHLAAWNGNLEIVKMLLLQTDILN---AVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNS------------  147 (854)
T ss_pred             cceEEehhhcCcchHHHHHHhcccCCC---cccccCcCccchhhhhcchHHHHHHHhcCCCccccCcc------------
Confidence            999999999999999999999985543   37889999999999999999999999998776553332            


Q ss_pred             CccccCCcchhhhhhhhccccccccccCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCcccccccCCCcchhHHHHHHHh
Q 005556          264 YAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKL  343 (691)
Q Consensus       264 ~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (691)
                                                                                                      
T Consensus       148 --------------------------------------------------------------------------------  147 (854)
T KOG0507|consen  148 --------------------------------------------------------------------------------  147 (854)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHcCcHHHHHHHHHHCCc-------cccccccCCCcHHHHHHhcCC
Q 005556          344 THMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEFIMAYNY-------SALLLNSQNHGIFELAVLHRR  416 (691)
Q Consensus       344 ~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~-------~~~~~d~~G~T~Lh~A~~~~~  416 (691)
                                                +.|+|-+|++.|..++|+.|+...-.       ....++-.+-+|||+|+++||
T Consensus       148 --------------------------~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh  201 (854)
T KOG0507|consen  148 --------------------------KETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGH  201 (854)
T ss_pred             --------------------------cccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcch
Confidence                                      34555555555555555555544100       012456688899999999999


Q ss_pred             hhHHHHHhcCCCcccccccccCCCCchhhhhhccCCCCCCCchHHhhHHHHHHHHhhhhcCCchhHHHhhhcCCCchhhh
Q 005556          417 EKVFNLIHGVNSSYFSISLEDKSGNNILHLTGKSEPSRHVPGAALKMQRELQWFKLAKNLVHPQFREAENKLEQTPTEVF  496 (691)
Q Consensus       417 ~~iv~~Ll~~~~~~~~~n~~D~~G~TpLHlAa~~g~~~~v~~~al~~~~el~~~~~v~~~~~~~~~~~~N~~G~Tp~di~  496 (691)
                      .++++.|+..|   .++|...++| |+||-|+..|..+.|.-.             .+.   ..+..++|.+|+|++|+.
T Consensus       202 ~~~~~~ll~ag---~din~~t~~g-talheaalcgk~evvr~l-------------l~~---gin~h~~n~~~qtaldil  261 (854)
T KOG0507|consen  202 VECMQALLEAG---FDINYTTEDG-TALHEAALCGKAEVVRFL-------------LEI---GINTHIKNQHGQTALDII  261 (854)
T ss_pred             HHHHHHHHhcC---CCcccccccc-hhhhhHhhcCcchhhhHH-------------Hhh---ccccccccccchHHHHHH
Confidence            99999999998   9999999998 999999999986555311             111   123678999999999998


Q ss_pred             hHHHHHHHHH
Q 005556          497 TKEHKELAKE  506 (691)
Q Consensus       497 ~~~~~~l~~~  506 (691)
                      .+.......+
T Consensus       262 ~d~~~~~~~e  271 (854)
T KOG0507|consen  262 IDLQENRRYE  271 (854)
T ss_pred             Hhcchhhhhh
Confidence            7655444333

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.88  E-value=5.5e-22  Score=230.98  Aligned_cols=176  Identities=15%  Similarity=0.082  Sum_probs=135.1

Q ss_pred             ccHHHHHHHHcCCHHHHHHHHhcCh-hhhhcccCCCCCcchhh-hcccccchhccCCCCHHHHHHHHhccCCCCCccccc
Q 005556           67 RHLELYRMIQMNDWQSVDGFVQSNT-DILKEHNFLGRSLTIFH-LIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSC  144 (691)
Q Consensus        67 ~~~~L~~Aa~~G~~~~v~~ll~~~~-~~~~~~~~~~~g~T~Lh-~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~  144 (691)
                      +..+++.||..||.+.|+.++++.+ ..++..  |..|+|||| .      |+.++  +.++++.|++.+   .      
T Consensus        17 ~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~--d~~G~t~Lh~~------A~~~~--~~eiv~lLl~~g---~------   77 (743)
T TIGR00870        17 EEKAFLPAAERGDLASVYRDLEEPKKLNINCP--DRLGRSALFVA------AIENE--NLELTELLLNLS---C------   77 (743)
T ss_pred             HHHHHHHHHHcCCHHHHHHHhccccccCCCCc--CccchhHHHHH------HHhcC--hHHHHHHHHhCC---C------
Confidence            4588999999999999999998732 233444  789999999 8      88888  999999999987   2      


Q ss_pred             cCCCCChHHHHHHHc---CCHHHHHHHHHcCch-----hhh---cCCCC-CCcHHHHHHHcCChHHHHHHHhcCCCCccc
Q 005556          145 KDGGGNTVLSLCAIR---GNLKASKILVKHKHE-----LLI---KQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVEN  212 (691)
Q Consensus       145 ~d~~G~TpLh~Aa~~---G~~~ivk~Ll~~~~~-----l~~---~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~  212 (691)
                      .+..|.||||.|+..   +...+++.+.+..++     ...   ...+. |.||||+||..|+.++|++|++++++.+..
T Consensus        78 ~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~  157 (743)
T TIGR00870        78 RGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPAR  157 (743)
T ss_pred             CCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcC
Confidence            578899999999872   223344444444322     110   12345 999999999999999999999999876532


Q ss_pred             cc-----------cCCCCCcHHHHHHHcCcHHHHHHHHHhCCCCccCCCCC-CCHHHHHHcC
Q 005556          213 FY-----------CGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQ-KMALDSLALK  262 (691)
Q Consensus       213 ~~-----------~~~~G~t~Lh~Ai~~g~~~iv~~Ll~~~~~~~~~~d~~-~TpLh~Aa~~  262 (691)
                      ..           ....|.||||.|+..|+.+++++|++.++++... |.. +||||+|+..
T Consensus       158 ~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~-d~~g~T~Lh~A~~~  218 (743)
T TIGR00870       158 ACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTA-DSLGNTLLHLLVME  218 (743)
T ss_pred             cCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhH-hhhhhHHHHHHHhh
Confidence            10           1246899999999999999999999998877654 444 8899888875

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]

Probab=99.88  E-value=9.7e-23  Score=221.20  Aligned_cols=85  Identities=13%  Similarity=0.035  Sum_probs=76.8

Q ss_pred             CCChHHHHHHHcCcHHHHHHHHHHCCccccccccCCCcHHHHHHhcCChhHHHHHhcCCCcccccccccCCCCchhhhhh
Q 005556          369 KLKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHLTG  448 (691)
Q Consensus       369 ~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~D~~G~TpLHlAa  448 (691)
                      .-.|+|-+++..||...|+.|+...+. ...+|++|+|+|.+|+..|+...+.+|++++   ++++.+|+.-+|+++-|.
T Consensus       993 T~dtalti~a~kGh~kfv~~lln~~at-v~v~NkkG~T~Lwla~~Gg~lss~~il~~~~---ad~d~qdnr~~S~~maaf 1068 (2131)
T KOG4369|consen  993 TWDTALTIPANKGHTKFVPKLLNGDAT-VRVPNKKGCTVLWLASAGGALSSCPILVSSV---ADADQQDNRTNSRTMAAF 1068 (2131)
T ss_pred             cCCccceeecCCCchhhhHHhhCCccc-eecccCCCCcccchhccCCccccchHHhhcc---cChhhhhcccccccHHHH
Confidence            356899999999999999999876554 5688999999999999999999999999997   999999999999999999


Q ss_pred             ccCCCCCCC
Q 005556          449 KSEPSRHVP  457 (691)
Q Consensus       449 ~~g~~~~v~  457 (691)
                      +.|+..+|.
T Consensus      1069 RKgh~~iVk 1077 (2131)
T KOG4369|consen 1069 RKGHFAIVK 1077 (2131)
T ss_pred             Hhchhheec
Confidence            999986653

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.85  E-value=3.5e-21  Score=187.94  Aligned_cols=199  Identities=17%  Similarity=0.179  Sum_probs=155.1

Q ss_pred             CcchhhhcccccchhccCCCCHHHHHHHHhccCC-CCC---ccccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhc
Q 005556          103 SLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDV-DIS---ETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIK  178 (691)
Q Consensus       103 g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~-~~~---~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~  178 (691)
                      ..|.+|.   ++--+..++.+.+.|+..|..... .+.   -++|..|.+|||+||||+.++|.++|+.||+.+-.-+ +
T Consensus       221 ~~tv~~e---W~~~a~~s~a~pe~V~~~l~~f~als~~lL~yvVNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~V-D  296 (452)
T KOG0514|consen  221 KATVQHE---WFTNSSTSSSDPEQVEDYLAYFEALSPPLLEYVVNLADSNGNTALHYAVSHANFDVVSILLDSGVCDV-D  296 (452)
T ss_pred             HHHHHHH---HHHhcccCCCCHHHHHHHHHHHHhcChHHHHHHhhhhcCCCCeeeeeeecccchHHHHHHhccCcccc-c
Confidence            3566665   444444454578888765543211 111   1378899999999999999999999999999998888 8


Q ss_pred             CCCC-CCcHHHHHHHc-----CChHHHHHHHhcCCCCccccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCCccCCCCC
Q 005556          179 QTNQ-NSLPVHLAALF-----GHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQ  252 (691)
Q Consensus       179 ~~n~-G~TpLh~Aa~~-----g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~Ai~~g~~~iv~~Ll~~~~~~~~~~d~~  252 (691)
                      .+|+ |.||+|+|+..     .+.++|..|.+.+....   .....|.|+|++|+.+|+.|+|+.||..+++++...   
T Consensus       297 ~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNa---KAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQD---  370 (452)
T KOG0514|consen  297 QQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNA---KASQHGQTALMLAVSHGRVDMVKALLACGADVNIQD---  370 (452)
T ss_pred             ccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcch---hhhhhcchhhhhhhhcCcHHHHHHHHHccCCCcccc---
Confidence            9999 99999999864     45788888888765432   246678899999999999999999988888876632   


Q ss_pred             CCHHHHHHcCCCccccCCcchhhhhhhhccccccccccCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCcccccccCCCc
Q 005556          253 KMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKW  332 (691)
Q Consensus       253 ~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (691)
                                                                                                      
T Consensus       371 --------------------------------------------------------------------------------  370 (452)
T KOG0514|consen  371 --------------------------------------------------------------------------------  370 (452)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             chhHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHcCcHHHHHHHHHHCCccccccccCCCcHHHHHH
Q 005556          333 PCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAV  412 (691)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~A~  412 (691)
                                                         .+|.|+|+.||++||.|||+.||......+...|.+|-|+|.+|.
T Consensus       371 -----------------------------------dDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAl  415 (452)
T KOG0514|consen  371 -----------------------------------DDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIAL  415 (452)
T ss_pred             -----------------------------------CCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHH
Confidence                                               236788888888899999988888777777788889999999999


Q ss_pred             hcCChhHHHHHhcC
Q 005556          413 LHRREKVFNLIHGV  426 (691)
Q Consensus       413 ~~~~~~iv~~Ll~~  426 (691)
                      +.||.+|.-+|+.+
T Consensus       416 eagh~eIa~mlYa~  429 (452)
T KOG0514|consen  416 EAGHREIAVMLYAH  429 (452)
T ss_pred             hcCchHHHHHHHHH
Confidence            99998888888766

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]

Probab=99.85  E-value=1.4e-21  Score=212.30  Aligned_cols=274  Identities=15%  Similarity=0.060  Sum_probs=212.3

Q ss_pred             CCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCC
Q 005556          101 GRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQT  180 (691)
Q Consensus       101 ~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~  180 (691)
                      .+-+|+|-.      ||..|  |.|+|++|+.+|   .+  +..+|+.|.+||.+|+-.||..+|+.|+++..++. ...
T Consensus       755 ~n~~t~LT~------acagg--h~e~vellv~rg---an--iehrdkkgf~plImaatagh~tvV~~llk~ha~ve-aQs  820 (2131)
T KOG4369|consen  755 PNIKTNLTS------ACAGG--HREEVELLVVRG---AN--IEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVE-AQS  820 (2131)
T ss_pred             ccccccccc------cccCc--cHHHHHHHHHhc---cc--ccccccccchhhhhhcccCchHHHHHHHhhhhhhh-hhc
Confidence            345799999      99999  999999999998   54  78899999999999999999999999999999999 888


Q ss_pred             CC-CCcHHHHHHHcCChHHHHHHHhcCCCCccccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCCccCCCCC--CCHHH
Q 005556          181 NQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQ--KMALD  257 (691)
Q Consensus       181 n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~Ai~~g~~~iv~~Ll~~~~~~~~~~d~~--~TpLh  257 (691)
                      ++ ++|+|-+||..|+.++|++||..+++..   .++-...|||.+|...|+.+++..|+..+.+++....+.  .+||.
T Consensus       821 drtkdt~lSlacsggr~~vvelLl~~ganke---hrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLm  897 (2131)
T KOG4369|consen  821 DRTKDTMLSLACSGGRTRVVELLLNAGANKE---HRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLM  897 (2131)
T ss_pred             ccccCceEEEecCCCcchHHHHHHHhhcccc---ccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhh
Confidence            88 9999999999999999999999998754   477888999999999999999999999999998877766  89999


Q ss_pred             HHHcCCCccccCCcchhhhhhhhccccccccccCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCcccccccCCCcchhHH
Q 005556          258 SLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKA  337 (691)
Q Consensus       258 ~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (691)
                      +|+..|                                                                          
T Consensus       898 latmng--------------------------------------------------------------------------  903 (2131)
T KOG4369|consen  898 LATMNG--------------------------------------------------------------------------  903 (2131)
T ss_pred             hhhhcc--------------------------------------------------------------------------
Confidence            998864                                                                          


Q ss_pred             HHHHHhhhHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHcCcHHHHHHHHHHCCccccccccCCCcHHHHHHhcCCh
Q 005556          338 IYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRRE  417 (691)
Q Consensus       338 ~~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~  417 (691)
                             |..+...+.   +...++|..-..+.+|+|-+|+..|..|+|..||..... .+.+-+.|-|||+-++..|..
T Consensus       904 -------h~~at~~ll---~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~an-vehRaktgltplme~AsgGyv  972 (2131)
T KOG4369|consen  904 -------HQAATLSLL---QPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQAN-VEHRAKTGLTPLMEMASGGYV  972 (2131)
T ss_pred             -------ccHHHHHHh---cccchhccccccccccceeeccccCcchHHHHHHHHhhh-hhhhcccCCcccchhhcCCcc
Confidence                   222222221   222222222213457788888888888888777777655 456777888888888888888


Q ss_pred             hHHHHHhcCCCccccccc--ccCCCCchhhhhhccCCCCCCCchHHhhHHHHHHHHhhhhcCCc-hhHHHhhhcCCCchh
Q 005556          418 KVFNLIHGVNSSYFSISL--EDKSGNNILHLTGKSEPSRHVPGAALKMQRELQWFKLAKNLVHP-QFREAENKLEQTPTE  494 (691)
Q Consensus       418 ~iv~~Ll~~~~~~~~~n~--~D~~G~TpLHlAa~~g~~~~v~~~al~~~~el~~~~~v~~~~~~-~~~~~~N~~G~Tp~d  494 (691)
                      ++-++|+..|   +|.|+  .-+.-.|+|-++|..|+..                 .|.+++.. .-.+++|++|.|++=
T Consensus       973 dvg~~li~~g---ad~nasPvp~T~dtalti~a~kGh~k-----------------fv~~lln~~atv~v~NkkG~T~Lw 1032 (2131)
T KOG4369|consen  973 DVGNLLIAAG---ADTNASPVPNTWDTALTIPANKGHTK-----------------FVPKLLNGDATVRVPNKKGCTVLW 1032 (2131)
T ss_pred             ccchhhhhcc---cccccCCCCCcCCccceeecCCCchh-----------------hhHHhhCCccceecccCCCCcccc
Confidence            8888888877   55554  3345567888888887742                 23333333 236677888888774


Q ss_pred             hh
Q 005556          495 VF  496 (691)
Q Consensus       495 i~  496 (691)
                      ++
T Consensus      1033 la 1034 (2131)
T KOG4369|consen 1033 LA 1034 (2131)
T ss_pred             hh
Confidence            43

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.84  E-value=2.7e-20  Score=217.99  Aligned_cols=172  Identities=14%  Similarity=0.085  Sum_probs=152.5

Q ss_pred             ccHHHHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccC
Q 005556           67 RHLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKD  146 (691)
Q Consensus        67 ~~~~L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d  146 (691)
                      ..++|+.||..|+.+.++.+++.+.+. +..  |..|+||||+      ||..|  +.++++.|+++|   .+  ++.+|
T Consensus       525 ~~~~L~~Aa~~g~~~~l~~Ll~~G~d~-n~~--d~~G~TpLh~------Aa~~g--~~~~v~~Ll~~g---ad--in~~d  588 (823)
T PLN03192        525 MASNLLTVASTGNAALLEELLKAKLDP-DIG--DSKGRTPLHI------AASKG--YEDCVLVLLKHA---CN--VHIRD  588 (823)
T ss_pred             chhHHHHHHHcCCHHHHHHHHHCCCCC-CCC--CCCCCCHHHH------HHHcC--hHHHHHHHHhcC---CC--CCCcC
Confidence            358899999999999999999886653 555  9999999999      99999  999999999997   44  78899


Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCCCCccccccCCCCCcHHHH
Q 005556          147 GGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSD  225 (691)
Q Consensus       147 ~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~  225 (691)
                      .+|+||||+|+..|+.+++++|++.+...    ... |.+|||.||..|+.+++++|++++++.+.   +|.+|.||||.
T Consensus       589 ~~G~TpL~~A~~~g~~~iv~~L~~~~~~~----~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~---~d~~G~TpLh~  661 (823)
T PLN03192        589 ANGNTALWNAISAKHHKIFRILYHFASIS----DPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDS---EDHQGATALQV  661 (823)
T ss_pred             CCCCCHHHHHHHhCCHHHHHHHHhcCccc----CcccCchHHHHHHHhCCHHHHHHHHHCCCCCCC---CCCCCCCHHHH
Confidence            99999999999999999999999865432    234 88999999999999999999999988654   79999999999


Q ss_pred             HHHcCcHHHHHHHHHhCCCCccCCCCC-CCHHHHHHc
Q 005556          226 LIKANLYDVALNLLKNHPEIVHDIDSQ-KMALDSLAL  261 (691)
Q Consensus       226 Ai~~g~~~iv~~Ll~~~~~~~~~~d~~-~TpLh~Aa~  261 (691)
                      |+..|+.+++++|+++++++......+ .||++++..
T Consensus       662 A~~~g~~~iv~~Ll~~GAdv~~~~~~g~~t~~~l~~~  698 (823)
T PLN03192        662 AMAEDHVDMVRLLIMNGADVDKANTDDDFSPTELREL  698 (823)
T ss_pred             HHHCCcHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Confidence            999999999999999999988877777 899988754

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=99.81  E-value=1.1e-19  Score=187.23  Aligned_cols=226  Identities=18%  Similarity=0.159  Sum_probs=174.8

Q ss_pred             chhccCCCCHHHHHHHHhccCCCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHc
Q 005556          115 VDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALF  193 (691)
Q Consensus       115 ~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~  193 (691)
                      .||..|  ..+-|+.|+..+   ..  .+..|.+|.|+||-+|...|.+||++|++.+++++  .++. |+||||.|+..
T Consensus        46 ~A~~~~--d~~ev~~ll~~g---a~--~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn--~~d~e~wtPlhaaasc  116 (527)
T KOG0505|consen   46 EACSRG--DLEEVRKLLNRG---AS--PNLCNVDGLTALHQACIDDNLEMVKFLVENGANVN--AQDNEGWTPLHAAASC  116 (527)
T ss_pred             hccccc--cHHHHHHHhccC---CC--ccccCCccchhHHHHHhcccHHHHHHHHHhcCCcc--ccccccCCcchhhccc
Confidence            389999  999999999997   44  47789999999999999999999999999999998  6677 99999999999


Q ss_pred             CChHHHHHHHhcCCCCccccccCCCCCcHHHHHHHcCcHHHHHHHHHhCC-CCccCCCCC-CCHHHHHHcCCCccccCCc
Q 005556          194 GHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHP-EIVHDIDSQ-KMALDSLALKPYAFESGSR  271 (691)
Q Consensus       194 g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~Ai~~g~~~iv~~Ll~~~~-~~~~~~d~~-~TpLh~Aa~~~~~f~s~~~  271 (691)
                      ||..++++|++++++...   .|.+|..|+-.|......++...-..+.. ++....... .+-|+-             
T Consensus       117 g~~~i~~~li~~gA~~~a---vNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D-------------  180 (527)
T KOG0505|consen  117 GYLNIVEYLIQHGANLLA---VNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDD-------------  180 (527)
T ss_pred             ccHHHHHHHHHhhhhhhh---ccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHH-------------
Confidence            999999999999988543   68888888877766555555444333311 100000000 111111             


Q ss_pred             chhhhhhhhccccccccccCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCcccccccCCCcchhHHHHHHHhhhHHHHHH
Q 005556          272 LGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEI  351 (691)
Q Consensus       272 l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  351 (691)
                                                                                                      
T Consensus       181 --------------------------------------------------------------------------------  180 (527)
T KOG0505|consen  181 --------------------------------------------------------------------------------  180 (527)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             HHHHHHHHHhhhhhhccCCChHHHHHHHcCcHHHHHHHHHHCCccccccccCCCcHHHHHHhcCChhHHHHHhcCCCccc
Q 005556          352 VRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYF  431 (691)
Q Consensus       352 L~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~  431 (691)
                      ..+....+...+... ..|.|.||+|+.+|..++.+.|++.+.+. +.+|.+|+||||.|+..|+.++.++|+++|   +
T Consensus       181 ~~q~l~~G~~~d~~~-~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~-~~~D~dgWtPlHAAA~Wg~~~~~elL~~~g---a  255 (527)
T KOG0505|consen  181 ARQWLNAGAELDARH-ARGATALHVAAANGYTEVAALLLQAGYSV-NIKDYDGWTPLHAAAHWGQEDACELLVEHG---A  255 (527)
T ss_pred             HHHHHhccccccccc-cccchHHHHHHhhhHHHHHHHHHHhccCc-ccccccCCCcccHHHHhhhHhHHHHHHHhh---c
Confidence            011111111112122 33899999999999999999999998774 588999999999999999999999999998   9


Q ss_pred             ccccccCCCCchhhhhhcc
Q 005556          432 SISLEDKSGNNILHLTGKS  450 (691)
Q Consensus       432 ~~n~~D~~G~TpLHlAa~~  450 (691)
                      +++.....|.||+.+|..-
T Consensus       256 ~~d~~t~~g~~p~dv~dee  274 (527)
T KOG0505|consen  256 DMDAKTKMGETPLDVADEE  274 (527)
T ss_pred             ccchhhhcCCCCccchhhh
Confidence            9999999999999999864

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=99.78  E-value=8.9e-18  Score=181.37  Aligned_cols=204  Identities=18%  Similarity=0.124  Sum_probs=152.6

Q ss_pred             hHHHHHHHcCCHHHHHHHHHcCc--------hhhhcCCCC-CCcHHHHHHH---cCChHHHHHHHhcCCCCccccc--cC
Q 005556          151 TVLSLCAIRGNLKASKILVKHKH--------ELLIKQTNQ-NSLPVHLAAL---FGHKDTFEYLLEETPGRVENFY--CG  216 (691)
Q Consensus       151 TpLh~Aa~~G~~~ivk~Ll~~~~--------~l~~~~~n~-G~TpLh~Aa~---~g~~~iv~~Ll~~~~~~~~~~~--~~  216 (691)
                      -++..|...|.++....|+....        .-. +.+.. |+|.||.|..   .++.++++.|++.-+......+  ..
T Consensus       103 ~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~-~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~ee  181 (782)
T KOG3676|consen  103 DALFIADSEGALSDLDGLLKFLRKSKYRLTDWKL-NERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEE  181 (782)
T ss_pred             hhhhhccccccHHHHhccchhhhhhhhhhhhhcc-ccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHh
Confidence            66777777777777776666542        122 36667 9999999987   4557899999988765433222  34


Q ss_pred             CCCCcHHHHHHHcCcHHHHHHHHHhCCCCccCCCCCCCHHHHHHcCCCccccCCcchhhhhhhhccccccccccCCCCCC
Q 005556          217 GDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNP  296 (691)
Q Consensus       217 ~~G~t~Lh~Ai~~g~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~  296 (691)
                      ..|.||||+||.+.+.++|++|++.++|+....            .|+.|.....-                        
T Consensus       182 Y~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa------------~G~FF~~~dqk------------------------  225 (782)
T KOG3676|consen  182 YYGQSALHIAIVNRDAELVRLLLAAGADVHARA------------CGAFFCPDDQK------------------------  225 (782)
T ss_pred             hcCcchHHHHHHhccHHHHHHHHHcCCchhhHh------------hccccCccccc------------------------
Confidence            569999999999999999999999999986532            22222110000                        


Q ss_pred             CCCCCCCCCCCcccCCCCCCCCCCCcccccccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhc-cCCChHHH
Q 005556          297 NVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANR-NKLKGALF  375 (691)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~~~~~-~~g~tpLh  375 (691)
                             ..+                                                     ...+-.+. .-|+.||-
T Consensus       226 -------~~r-----------------------------------------------------k~T~Y~G~~YfGEyPLS  245 (782)
T KOG3676|consen  226 -------ASR-----------------------------------------------------KSTNYTGYFYFGEYPLS  245 (782)
T ss_pred             -------ccc-----------------------------------------------------cccCCcceeeeccCchH
Confidence                   000                                                     00000111 55899999


Q ss_pred             HHHHcCcHHHHHHHHHHCCccccccccCCCcHHHHHHhcCChhHHHHHhcCCCcccccccccCCCCchhhhhhccCCC
Q 005556          376 TATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHLTGKSEPS  453 (691)
Q Consensus       376 ~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~D~~G~TpLHlAa~~g~~  453 (691)
                      .||..++.|+++.|+++++| ++.+|+.|+|.||..|.+-..++.+++++.|.. .+...+|++|-|||-+||+.|..
T Consensus       246 fAAC~nq~eivrlLl~~gAd-~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~-~l~~v~N~qgLTPLtLAaklGk~  321 (782)
T KOG3676|consen  246 FAACTNQPEIVRLLLAHGAD-PNAQDSNGNTVLHMLVIHFVTEMYDLALELGAN-ALEHVRNNQGLTPLTLAAKLGKK  321 (782)
T ss_pred             HHHHcCCHHHHHHHHhcCCC-CCccccCCChHHHHHHHHHHHHHHHHHHhcCCC-ccccccccCCCChHHHHHHhhhH
Confidence            99999999999999998777 568999999999999999999999999999832 45889999999999999999984

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.78  E-value=4.5e-19  Score=173.34  Aligned_cols=160  Identities=18%  Similarity=0.224  Sum_probs=106.3

Q ss_pred             hhhccHHHHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccC---CCCHHHHHHHHhccCCCCCc
Q 005556           64 KYRRHLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETD---DEATDLIDKLAQSTDVDISE  140 (691)
Q Consensus        64 ~~~~~~~L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g---~~~~~iv~~Ll~~~~~~~~~  140 (691)
                      +..++|+||+|+..+|.++|+.||+.+...++.+  +.-|.||.++      |+...   +.+.++|..|.+.|     +
T Consensus       265 DsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~q--NrAGYtpiML------aALA~lk~~~d~~vV~~LF~mg-----n  331 (452)
T KOG0514|consen  265 DSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQ--NRAGYTPVML------AALAKLKQPADRTVVERLFKMG-----D  331 (452)
T ss_pred             cCCCCeeeeeeecccchHHHHHHhccCccccccc--ccccccHHHH------HHHHhhcchhhHHHHHHHHhcc-----C
Confidence            3346677777777777777777777766666554  6677777777      65432   11466777777766     2


Q ss_pred             ccccc-CCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCCCCccccccCCC
Q 005556          141 TLSCK-DGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGD  218 (691)
Q Consensus       141 ~l~~~-d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~  218 (691)
                       +|.+ ...|+|+|++|+.+|+.++|+.||..+++++  .+|. |.|+||+||++||.|++++||........  ..|.+
T Consensus       332 -VNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVN--iQDdDGSTALMCA~EHGhkEivklLLA~p~cd~s--LtD~D  406 (452)
T KOG0514|consen  332 -VNAKASQHGQTALMLAVSHGRVDMVKALLACGADVN--IQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDIS--LTDVD  406 (452)
T ss_pred             -cchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCc--cccCCccHHHhhhhhhChHHHHHHHhccCcccce--eecCC
Confidence             2322 4457777777777777777777777777766  6666 77777777777777777777766533222  36777


Q ss_pred             CCcHHHHHHHcCcHHHHHHHHHh
Q 005556          219 GGRLLSDLIKANLYDVALNLLKN  241 (691)
Q Consensus       219 G~t~Lh~Ai~~g~~~iv~~Ll~~  241 (691)
                      |.|+|.+|...|+-|+.-.|-.+
T Consensus       407 gSTAl~IAleagh~eIa~mlYa~  429 (452)
T KOG0514|consen  407 GSTALSIALEAGHREIAVMLYAH  429 (452)
T ss_pred             CchhhhhHHhcCchHHHHHHHHH
Confidence            77777777777777777666544

>PHA02741 hypothetical protein; Provisional

Probab=99.77  E-value=2.4e-18  Score=162.27  Aligned_cols=131  Identities=16%  Similarity=0.192  Sum_probs=112.7

Q ss_pred             CCCCcchhhhcccccchhccCCCCHHHHHHHHhcc--CCCCCccccccCCCCChHHHHHHHcCC----HHHHHHHHHcCc
Q 005556          100 LGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQST--DVDISETLSCKDGGGNTVLSLCAIRGN----LKASKILVKHKH  173 (691)
Q Consensus       100 ~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~--~~~~~~~l~~~d~~G~TpLh~Aa~~G~----~~ivk~Ll~~~~  173 (691)
                      +..|+||||+      |+..|  +.++++.|+...  .+...+ ++.+|..|+||||+|+..|+    .+++++|++.++
T Consensus        18 ~~~g~t~Lh~------Aa~~g--~~~~v~~l~~~~~~~~~ga~-in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~ga   88 (169)
T PHA02741         18 NSEGENFFHE------AARCG--CFDIIARFTPFIRGDCHAAA-LNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGA   88 (169)
T ss_pred             ccCCCCHHHH------HHHcC--CHHHHHHHHHHhccchhhhh-hhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCC
Confidence            7889999999      99999  999999987542  011233 78899999999999999999    589999999999


Q ss_pred             hhhhcCCC-C-CCcHHHHHHHcCChHHHHHHHhc-CCCCccccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCC
Q 005556          174 ELLIKQTN-Q-NSLPVHLAALFGHKDTFEYLLEE-TPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPE  244 (691)
Q Consensus       174 ~l~~~~~n-~-G~TpLh~Aa~~g~~~iv~~Ll~~-~~~~~~~~~~~~~G~t~Lh~Ai~~g~~~iv~~Ll~~~~~  244 (691)
                      ++.  .++ . |+||||+|+..|+.+++++|++. +.+..   .+|.+|.||||.|+..++.++++.|++....
T Consensus        89 din--~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~---~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~  157 (169)
T PHA02741         89 DIN--AQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLH---FCNADNKSPFELAIDNEDVAMMQILREIVAT  157 (169)
T ss_pred             CCC--CCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC---cCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
Confidence            887  555 5 99999999999999999999974 65543   4789999999999999999999999987644

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.75  E-value=1.2e-17  Score=156.67  Aligned_cols=134  Identities=13%  Similarity=-0.014  Sum_probs=113.1

Q ss_pred             CCCCcchhhhcccccchhccCCCCH----HHHHHHHhccCCCCCccccccCCCCChHHHHHHHcCCHHH---HHHHHHcC
Q 005556          100 LGRSLTIFHLIMGLLVDVETDDEAT----DLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKA---SKILVKHK  172 (691)
Q Consensus       100 ~~~g~T~Lh~~~~l~~Aa~~g~~~~----~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~i---vk~Ll~~~  172 (691)
                      +.++.++||.      ||+.|  +.    ++++.|++.+   . . ++.+|..|+||||+||..|+.+.   +++|++.+
T Consensus        17 ~~~~~~~l~~------a~~~g--~~~~l~~~~~~l~~~g---~-~-~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~G   83 (166)
T PHA02743         17 DEDEQNTFLR------ICRTG--NIYELMEVAPFISGDG---H-L-LHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMG   83 (166)
T ss_pred             ccCCCcHHHH------HHHcC--CHHHHHHHHHHHhhcc---h-h-hhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcC
Confidence            6778899999      99999  97    5555666665   3 2 77889999999999999998654   89999999


Q ss_pred             chhhhcCCC-C-CCcHHHHHHHcCChHHHHHHHh-cCCCCccccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCCccCC
Q 005556          173 HELLIKQTN-Q-NSLPVHLAALFGHKDTFEYLLE-ETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDI  249 (691)
Q Consensus       173 ~~l~~~~~n-~-G~TpLh~Aa~~g~~~iv~~Ll~-~~~~~~~~~~~~~~G~t~Lh~Ai~~g~~~iv~~Ll~~~~~~~~~~  249 (691)
                      +++.  .++ . |.||||+|+..|+.+++++|++ .+.+..   .++..|.||||+|+..++.+++++|++++++.....
T Consensus        84 adin--~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~---~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~  158 (166)
T PHA02743         84 ADIN--ARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLG---AINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPL  158 (166)
T ss_pred             CCCC--CCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCcc---CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcc
Confidence            9887  555 6 9999999999999999999995 666643   378999999999999999999999999988776544


Q ss_pred             CC
Q 005556          250 DS  251 (691)
Q Consensus       250 d~  251 (691)
                      ..
T Consensus       159 ~~  160 (166)
T PHA02743        159 SI  160 (166)
T ss_pred             cC
Confidence            33

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.74  E-value=6.9e-18  Score=156.86  Aligned_cols=132  Identities=10%  Similarity=-0.002  Sum_probs=106.1

Q ss_pred             CCCCCcchhhhcccccchhccCCCCHHHHHHHHhcc--CCCCCccccccCCCCChHHHHHHHcCCH---HHHHHHHHcCc
Q 005556           99 FLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQST--DVDISETLSCKDGGGNTVLSLCAIRGNL---KASKILVKHKH  173 (691)
Q Consensus        99 ~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~--~~~~~~~l~~~d~~G~TpLh~Aa~~G~~---~ivk~Ll~~~~  173 (691)
                      .|.+|.||||+      ||..|  +.  ++.+....  ......++..+|.+|.||||+|+..|+.   +++++|++.++
T Consensus        13 ~d~~g~tpLh~------A~~~g--~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~ga   82 (154)
T PHA02736         13 PDIEGENILHY------LCRNG--GV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGA   82 (154)
T ss_pred             cCCCCCCHHHH------HHHhC--CH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCC
Confidence            38889999999      99999  83  33333221  0001112556799999999999999987   46899999999


Q ss_pred             hhhhcCCC-C-CCcHHHHHHHcCChHHHHHHHhc-CCCCccccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCC
Q 005556          174 ELLIKQTN-Q-NSLPVHLAALFGHKDTFEYLLEE-TPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEI  245 (691)
Q Consensus       174 ~l~~~~~n-~-G~TpLh~Aa~~g~~~iv~~Ll~~-~~~~~~~~~~~~~G~t~Lh~Ai~~g~~~iv~~Ll~~~~~~  245 (691)
                      ++.  .++ . |+||||+|+..|+.+++++|++. +.+..   .+|..|.||||+|+..|+.+++++|++.+++.
T Consensus        83 din--~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n---~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~  152 (154)
T PHA02736         83 DIN--GKERVFGNTPLHIAVYTQNYELATWLCNQPGVNME---ILNYAFKTPYYVACERHDAKMMNILRAKGAQC  152 (154)
T ss_pred             Ccc--ccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCc---cccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            887  554 6 99999999999999999999975 55543   47999999999999999999999999988654

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]

Probab=99.74  E-value=2.3e-17  Score=145.08  Aligned_cols=144  Identities=17%  Similarity=0.143  Sum_probs=122.8

Q ss_pred             HHHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCCCC
Q 005556           70 ELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGG  149 (691)
Q Consensus        70 ~L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G  149 (691)
                      -+..|+..+....|+.||+..++-++.+  |.+|.||||.      |+.+|  |.+||+.|+..|   ++  .+.+...|
T Consensus        66 l~lwaae~nrl~eV~~lL~e~an~vNtr--D~D~YTpLHR------AaYn~--h~div~~ll~~g---An--~~a~T~~G  130 (228)
T KOG0512|consen   66 LLLWAAEKNRLTEVQRLLSEKANHVNTR--DEDEYTPLHR------AAYNG--HLDIVHELLLSG---AN--KEAKTNEG  130 (228)
T ss_pred             HHHHHHhhccHHHHHHHHHhcccccccc--ccccccHHHH------HHhcC--chHHHHHHHHcc---CC--cccccccC
Confidence            3788999999999999999999999998  9999999999      99999  999999999998   55  57789999


Q ss_pred             ChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCCh-HHHHHHHhcCCCCccccccCCCCCcHHHHHH
Q 005556          150 NTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHK-DTFEYLLEETPGRVENFYCGGDGGRLLSDLI  227 (691)
Q Consensus       150 ~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~-~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~Ai  227 (691)
                      +||||-||..++.+++-+|+..+++++  ...+ ..||||+||...+. ..+++|+......  +...+..+.||+.+|-
T Consensus       131 WTPLhSAckWnN~~va~~LLqhgaDVn--A~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~--pg~~nn~eeta~~iAR  206 (228)
T KOG0512|consen  131 WTPLHSACKWNNFEVAGRLLQHGADVN--AQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIH--PGLKNNLEETAFDIAR  206 (228)
T ss_pred             ccchhhhhcccchhHHHHHHhccCccc--ccccccchhhHHhhcccchHHHHHHHhhccccC--hhhhcCccchHHHHHH
Confidence            999999999999999999999999988  6666 89999999988774 4566666543322  2247888999999998


Q ss_pred             HcCcH
Q 005556          228 KANLY  232 (691)
Q Consensus       228 ~~g~~  232 (691)
                      +.+-.
T Consensus       207 RT~~s  211 (228)
T KOG0512|consen  207 RTSMS  211 (228)
T ss_pred             Hhhhh
Confidence            87543

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=99.72  E-value=2.2e-17  Score=170.27  Aligned_cols=206  Identities=17%  Similarity=0.133  Sum_probs=158.9

Q ss_pred             HHHHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCCC
Q 005556           69 LELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGG  148 (691)
Q Consensus        69 ~~L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~  148 (691)
                      -.++.|+..|+.+.|..||..+... +..  +.+|.|+||-      +|...  +.+||++|++++   ..  ++..|..
T Consensus        42 a~~l~A~~~~d~~ev~~ll~~ga~~-~~~--n~DglTalhq------~~id~--~~e~v~~l~e~g---a~--Vn~~d~e  105 (527)
T KOG0505|consen   42 AVFLEACSRGDLEEVRKLLNRGASP-NLC--NVDGLTALHQ------ACIDD--NLEMVKFLVENG---AN--VNAQDNE  105 (527)
T ss_pred             HHHHhccccccHHHHHHHhccCCCc-ccc--CCccchhHHH------HHhcc--cHHHHHHHHHhc---CC--ccccccc
Confidence            4578899999999999999987554 443  8999999999      99999  999999999998   55  8999999


Q ss_pred             CChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCChHHHH--------------------------H
Q 005556          149 GNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFE--------------------------Y  201 (691)
Q Consensus       149 G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~--------------------------~  201 (691)
                      |+||||.|+..||..++++|+..++++.  ..|. |..|+-+|...-..++..                          .
T Consensus       106 ~wtPlhaaascg~~~i~~~li~~gA~~~--avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q  183 (527)
T KOG0505|consen  106 GWTPLHAAASCGYLNIVEYLIQHGANLL--AVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQ  183 (527)
T ss_pred             cCCcchhhcccccHHHHHHHHHhhhhhh--hccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHH
Confidence            9999999999999999999999999887  6677 877776553222211111                          1


Q ss_pred             HHhcCCCCccccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCCccCCCCCCCHHHHHHcCCCccccCCcchhhhhhhhc
Q 005556          202 LLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYK  281 (691)
Q Consensus       202 Ll~~~~~~~~~~~~~~~G~t~Lh~Ai~~g~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~~~f~s~~~l~~~~~li~~  281 (691)
                      .+..+...+   ..+..|.|+||.|..+|+.+++.+|++.+.++... |                               
T Consensus       184 ~l~~G~~~d---~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~-D-------------------------------  228 (527)
T KOG0505|consen  184 WLNAGAELD---ARHARGATALHVAAANGYTEVAALLLQAGYSVNIK-D-------------------------------  228 (527)
T ss_pred             HHhcccccc---ccccccchHHHHHHhhhHHHHHHHHHHhccCcccc-c-------------------------------
Confidence            112332222   23444778888888888888888887776544331 0                               


Q ss_pred             cccccccccCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCcccccccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHh
Q 005556          282 CIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIW  361 (691)
Q Consensus       282 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~l~~~~~~  361 (691)
                                                                                                      
T Consensus       229 --------------------------------------------------------------------------------  228 (527)
T KOG0505|consen  229 --------------------------------------------------------------------------------  228 (527)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhhhhccCCChHHHHHHHcCcHHHHHHHHHHCCccccccccCCCcHHHHHHhc
Q 005556          362 TNRANRNKLKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLH  414 (691)
Q Consensus       362 ~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~A~~~  414 (691)
                            .+|+||||.||..|..++.+.|++++.+. +..+..|+||+-+|..-
T Consensus       229 ------~dgWtPlHAAA~Wg~~~~~elL~~~ga~~-d~~t~~g~~p~dv~dee  274 (527)
T KOG0505|consen  229 ------YDGWTPLHAAAHWGQEDACELLVEHGADM-DAKTKMGETPLDVADEE  274 (527)
T ss_pred             ------ccCCCcccHHHHhhhHhHHHHHHHhhccc-chhhhcCCCCccchhhh
Confidence                  34799999999999999999888888875 57788999999988763

>PHA02741 hypothetical protein; Provisional

Probab=99.72  E-value=3.8e-17  Score=154.10  Aligned_cols=126  Identities=17%  Similarity=0.172  Sum_probs=107.8

Q ss_pred             hccHHHHHHHHcCCHHHHHHHHhcC-----hhhhhcccCCCCCcchhhhcccccchhccCCCC----HHHHHHHHhccCC
Q 005556           66 RRHLELYRMIQMNDWQSVDGFVQSN-----TDILKEHNFLGRSLTIFHLIMGLLVDVETDDEA----TDLIDKLAQSTDV  136 (691)
Q Consensus        66 ~~~~~L~~Aa~~G~~~~v~~ll~~~-----~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~----~~iv~~Ll~~~~~  136 (691)
                      .+.|+||.|+..|+.+.++.++...     +..++.+  |..|+||||+      |+..|  +    .+++++|++.+  
T Consensus        20 ~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~--d~~g~T~Lh~------A~~~g--~~~~~~~ii~~Ll~~g--   87 (169)
T PHA02741         20 EGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNAT--DDAGQMCIHI------AAEKH--EAQLAAEIIDHLIELG--   87 (169)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhcc--CCCCCcHHHH------HHHcC--ChHHHHHHHHHHHHcC--
Confidence            4679999999999999999886421     2345555  8899999999      99999  9    58899999987  


Q ss_pred             CCCccccccCC-CCChHHHHHHHcCCHHHHHHHHHc-CchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCCC
Q 005556          137 DISETLSCKDG-GGNTVLSLCAIRGNLKASKILVKH-KHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPG  208 (691)
Q Consensus       137 ~~~~~l~~~d~-~G~TpLh~Aa~~G~~~ivk~Ll~~-~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~  208 (691)
                       +.  ++.+|. .|+||||+|+..|+.+++++|++. +.++.  .+|. |+||||+|+..|+.+++++|++....
T Consensus        88 -ad--in~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~--~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~  157 (169)
T PHA02741         88 -AD--INAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLH--FCNADNKSPFELAIDNEDVAMMQILREIVAT  157 (169)
T ss_pred             -CC--CCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC--cCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
Confidence             44  677785 899999999999999999999984 66554  7888 99999999999999999999988654

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.72  E-value=7.1e-17  Score=151.56  Aligned_cols=128  Identities=16%  Similarity=0.181  Sum_probs=105.7

Q ss_pred             ccHHHHHHHHcCCHHHHHHHH---hcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHH---HHHHHhccCCCCCc
Q 005556           67 RHLELYRMIQMNDWQSVDGFV---QSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDL---IDKLAQSTDVDISE  140 (691)
Q Consensus        67 ~~~~L~~Aa~~G~~~~v~~ll---~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~i---v~~Ll~~~~~~~~~  140 (691)
                      +.++||.||+.|+.+.+++++   ...+..++.+  |..|+||||+      |+..|  +.++   +++|++.+   .. 
T Consensus        20 ~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~--d~~g~t~Lh~------Aa~~g--~~~~~~~i~~Ll~~G---ad-   85 (166)
T PHA02743         20 EQNTFLRICRTGNIYELMEVAPFISGDGHLLHRY--DHHGRQCTHM------VAWYD--RANAVMKIELLVNMG---AD-   85 (166)
T ss_pred             CCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhcc--CCCCCcHHHH------HHHhC--ccCHHHHHHHHHHcC---CC-
Confidence            447899999999996555432   2334445555  8899999999      99999  8654   78999997   44 


Q ss_pred             cccccC-CCCChHHHHHHHcCCHHHHHHHHH-cCchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCCCCcc
Q 005556          141 TLSCKD-GGGNTVLSLCAIRGNLKASKILVK-HKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVE  211 (691)
Q Consensus       141 ~l~~~d-~~G~TpLh~Aa~~G~~~ivk~Ll~-~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~  211 (691)
                       ++.+| ..|+||||+|+..|+.+++++|++ .+.++.  .++. |.||||+|+..|+.+++++|++++++...
T Consensus        86 -in~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~--~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~  156 (166)
T PHA02743         86 -INARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLG--AINYQHETAYHIAYKMRDRRMMEILRANGAVCDD  156 (166)
T ss_pred             -CCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCcc--CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence             67787 589999999999999999999996 577666  7888 99999999999999999999999987654

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.71  E-value=4e-17  Score=151.76  Aligned_cols=127  Identities=14%  Similarity=0.082  Sum_probs=102.6

Q ss_pred             hhccHHHHHHHHcCCHHHHHHHHh----cChhhhhcccCCCCCcchhhhcccccchhccCCCCH---HHHHHHHhccCCC
Q 005556           65 YRRHLELYRMIQMNDWQSVDGFVQ----SNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEAT---DLIDKLAQSTDVD  137 (691)
Q Consensus        65 ~~~~~~L~~Aa~~G~~~~v~~ll~----~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~---~iv~~Ll~~~~~~  137 (691)
                      ..+.||||.|+..|+...+..+..    ..+..+...  |..|+||||+      |+..|  +.   ++++.|++.|   
T Consensus        15 ~~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~--d~~g~t~Lh~------a~~~~--~~~~~e~v~~Ll~~g---   81 (154)
T PHA02736         15 IEGENILHYLCRNGGVTDLLAFKNAISDENRYLVLEY--NRHGKQCVHI------VSNPD--KADPQEKLKLLMEWG---   81 (154)
T ss_pred             CCCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHh--cCCCCEEEEe------ecccC--chhHHHHHHHHHHcC---
Confidence            447899999999999543322211    112233344  8899999999      99999  86   4688999997   


Q ss_pred             CCccccccC-CCCChHHHHHHHcCCHHHHHHHHHc-CchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCCC
Q 005556          138 ISETLSCKD-GGGNTVLSLCAIRGNLKASKILVKH-KHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPG  208 (691)
Q Consensus       138 ~~~~l~~~d-~~G~TpLh~Aa~~G~~~ivk~Ll~~-~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~  208 (691)
                      ..  ++.+| ..|+||||+|+..|+.+++++|++. +.++.  .+|. |.||||+|+..|+.+++++|++.+++
T Consensus        82 ad--in~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n--~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~  151 (154)
T PHA02736         82 AD--INGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNME--ILNYAFKTPYYVACERHDAKMMNILRAKGAQ  151 (154)
T ss_pred             CC--ccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCc--cccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            44  67787 5999999999999999999999985 66665  7888 99999999999999999999998875

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.69  E-value=3.2e-16  Score=158.54  Aligned_cols=112  Identities=15%  Similarity=0.123  Sum_probs=60.2

Q ss_pred             hhccCCCCHHHHHHHHhccCCCCCcccccc----CCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHH
Q 005556          116 DVETDDEATDLIDKLAQSTDVDISETLSCK----DGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLA  190 (691)
Q Consensus       116 Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~----d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~A  190 (691)
                      |+..|  +.++++.|+++|   ++  ++.+    +..|.||||+|+..|+.+++++|++.++++. ...+. |.||||+|
T Consensus        40 A~~~~--~~eivk~LL~~G---Ad--iN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN-~~~~~~g~TpLh~A  111 (300)
T PHA02884         40 SIKFH--YTDIIDAILKLG---AD--PEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVN-RYAEEAKITPLYIS  111 (300)
T ss_pred             HHHcC--CHHHHHHHHHCC---CC--ccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcC-cccCCCCCCHHHHH
Confidence            44445  556666666555   22  2333    3455566666665566666666665555554 22334 55666666


Q ss_pred             HHcCChHHHHHHHhcCCCCccccccCCCCCcHHHHHHHcCcHHHHHHH
Q 005556          191 ALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNL  238 (691)
Q Consensus       191 a~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~Ai~~g~~~iv~~L  238 (691)
                      +..|+.+++++|++.+++.+.   +|.+|.||||+|+..++.+++..+
T Consensus       112 a~~~~~eivklLL~~GAdin~---kd~~G~TpL~~A~~~~~~~~~~~~  156 (300)
T PHA02884        112 VLHGCLKCLEILLSYGADINI---QTNDMVTPIELALMICNNFLAFMI  156 (300)
T ss_pred             HHcCCHHHHHHHHHCCCCCCC---CCCCCCCHHHHHHHhCChhHHHHh
Confidence            655666666666555555332   455555666665555555554433

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]

Probab=99.69  E-value=1.2e-16  Score=140.55  Aligned_cols=137  Identities=15%  Similarity=0.040  Sum_probs=114.3

Q ss_pred             chhccCCCCHHHHHHHHhccCCCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHc
Q 005556          115 VDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALF  193 (691)
Q Consensus       115 ~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~  193 (691)
                      .|+..+  ....|+.||+..   +.. ++.+|.+|.||||-|+.+||.+||+.|+..+++..  .+.. |+||||-||.-
T Consensus        69 waae~n--rl~eV~~lL~e~---an~-vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~--a~T~~GWTPLhSAckW  140 (228)
T KOG0512|consen   69 WAAEKN--RLTEVQRLLSEK---ANH-VNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKE--AKTNEGWTPLHSACKW  140 (228)
T ss_pred             HHHhhc--cHHHHHHHHHhc---ccc-ccccccccccHHHHHHhcCchHHHHHHHHccCCcc--cccccCccchhhhhcc
Confidence            399999  999999999986   777 99999999999999999999999999999999887  6666 99999999999


Q ss_pred             CChHHHHHHHhcCCCCccccccCCCCCcHHHHHHHcCcH-HHHHHHHHhCCCCccCCCCC-CCHHHHHHcC
Q 005556          194 GHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLY-DVALNLLKNHPEIVHDIDSQ-KMALDSLALK  262 (691)
Q Consensus       194 g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~Ai~~g~~-~iv~~Ll~~~~~~~~~~d~~-~TpLh~Aa~~  262 (691)
                      .+.+++-+|++++++.+.   ......||||.|+...+. +.+.+|+....-.+-..+.. .||+.+|-+.
T Consensus       141 nN~~va~~LLqhgaDVnA---~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT  208 (228)
T KOG0512|consen  141 NNFEVAGRLLQHGADVNA---QTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRT  208 (228)
T ss_pred             cchhHHHHHHhccCcccc---cccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHh
Confidence            999999999999999765   566678999999987765 55555554433223333444 9999998765

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.69  E-value=2.7e-16  Score=159.06  Aligned_cols=119  Identities=10%  Similarity=-0.030  Sum_probs=99.9

Q ss_pred             ccccCCCCChH-HHHHHHcCCHHHHHHHHHcCchhhhcC---CCC-CCcHHHHHHHcCChHHHHHHHhcCCCCccccccC
Q 005556          142 LSCKDGGGNTV-LSLCAIRGNLKASKILVKHKHELLIKQ---TNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCG  216 (691)
Q Consensus       142 l~~~d~~G~Tp-Lh~Aa~~G~~~ivk~Ll~~~~~l~~~~---~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~  216 (691)
                      +..+|..|.|+ ||.|++.|+.+++++|+++|+++. ..   .+. |.||||+|+..|+.+++++|+++|++.+.  ..+
T Consensus        25 ~~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN-~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~--~~~  101 (300)
T PHA02884         25 IKKKNKICIANILYSSIKFHYTDIIDAILKLGADPE-APFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNR--YAE  101 (300)
T ss_pred             hhccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCcc-ccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCc--ccC
Confidence            45578888865 566678899999999999999887 33   256 99999999999999999999999998653  135


Q ss_pred             CCCCcHHHHHHHcCcHHHHHHHHHhCCCCccCCCCCCCHHHHHHcCC
Q 005556          217 GDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKP  263 (691)
Q Consensus       217 ~~G~t~Lh~Ai~~g~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa~~~  263 (691)
                      ..|.||||.|+..++.++++.|++.+++.......+.||||+|+..+
T Consensus       102 ~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~  148 (300)
T PHA02884        102 EAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMIC  148 (300)
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhC
Confidence            67999999999999999999999999988875444499999998753

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.66  E-value=4.7e-17  Score=154.17  Aligned_cols=136  Identities=16%  Similarity=0.250  Sum_probs=121.0

Q ss_pred             HHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCCCCC
Q 005556           71 LYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGN  150 (691)
Q Consensus        71 L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~  150 (691)
                      ++.-|+.|+.-.|+.-|+.....++.-  |..|-+|||+      ||..|  |..+|+.|+..|   +.  ++..|...+
T Consensus         4 if~wcregna~qvrlwld~tehdln~g--ddhgfsplhw------aakeg--h~aivemll~rg---ar--vn~tnmgdd   68 (448)
T KOG0195|consen    4 IFGWCREGNAFQVRLWLDDTEHDLNVG--DDHGFSPLHW------AAKEG--HVAIVEMLLSRG---AR--VNSTNMGDD   68 (448)
T ss_pred             hhhhhhcCCeEEEEEEecCcccccccc--cccCcchhhh------hhhcc--cHHHHHHHHhcc---cc--cccccCCCC
Confidence            456688888888887787766666665  8899999999      99999  999999999998   65  788888889


Q ss_pred             hHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCCCCccccccCCCCCcHHHHH
Q 005556          151 TVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDL  226 (691)
Q Consensus       151 TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~A  226 (691)
                      ||||+||..||-++|+.|++..++++  ..|. |.|||||||.-|...+.+-|+..++...   +++++|.|||.-|
T Consensus        69 tplhlaaahghrdivqkll~~kadvn--avnehgntplhyacfwgydqiaedli~~ga~v~---icnk~g~tpldka  140 (448)
T KOG0195|consen   69 TPLHLAAAHGHRDIVQKLLSRKADVN--AVNEHGNTPLHYACFWGYDQIAEDLISCGAAVN---ICNKKGMTPLDKA  140 (448)
T ss_pred             cchhhhhhcccHHHHHHHHHHhcccc--hhhccCCCchhhhhhhcHHHHHHHHHhccceee---ecccCCCCchhhh
Confidence            99999999999999999999999887  8889 9999999999999999999999998754   4899999999876

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.61  E-value=4.4e-16  Score=147.69  Aligned_cols=133  Identities=20%  Similarity=0.207  Sum_probs=112.3

Q ss_pred             hccCCCCHHHHHHHHhccCCCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCC
Q 005556          117 VETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGH  195 (691)
Q Consensus       117 a~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~  195 (691)
                      |+.|  +.--|+.-++.-   ..+ ++.-|..|.+|||+||+.||..+|+.|+.+++.++  ..|. ..||||+||.+||
T Consensus         8 creg--na~qvrlwld~t---ehd-ln~gddhgfsplhwaakegh~aivemll~rgarvn--~tnmgddtplhlaaahgh   79 (448)
T KOG0195|consen    8 CREG--NAFQVRLWLDDT---EHD-LNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVN--STNMGDDTPLHLAAAHGH   79 (448)
T ss_pred             hhcC--CeEEEEEEecCc---ccc-cccccccCcchhhhhhhcccHHHHHHHHhcccccc--cccCCCCcchhhhhhccc
Confidence            4444  433344444443   455 88899999999999999999999999999999887  7888 8999999999999


Q ss_pred             hHHHHHHHhcCCCCccccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCCccCCCCCCCHHHHHH
Q 005556          196 KDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLA  260 (691)
Q Consensus       196 ~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~Ai~~g~~~iv~~Ll~~~~~~~~~~d~~~TpLh~Aa  260 (691)
                      .++|+.|++..++.+.   .+..|.||||+||.-|+-.+++-|+..++.+......+.|||..|-
T Consensus        80 rdivqkll~~kadvna---vnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldkak  141 (448)
T KOG0195|consen   80 RDIVQKLLSRKADVNA---VNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAK  141 (448)
T ss_pred             HHHHHHHHHHhcccch---hhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhc
Confidence            9999999999988654   7999999999999999999999999999988775444499998753

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.56  E-value=4.4e-14  Score=125.72  Aligned_cols=122  Identities=25%  Similarity=0.323  Sum_probs=108.1

Q ss_pred             CCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcC
Q 005556          100 LGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQ  179 (691)
Q Consensus       100 ~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~  179 (691)
                      +.+|.||||+      |+..|  +.++++.|++.+   ..  .+.++..|.||||+|+..++.+++++|++.++.+.  .
T Consensus         4 ~~~g~t~l~~------a~~~~--~~~~i~~li~~~---~~--~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~--~   68 (126)
T cd00204           4 DEDGRTPLHL------AASNG--HLEVVKLLLENG---AD--VNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVN--A   68 (126)
T ss_pred             CcCCCCHHHH------HHHcC--cHHHHHHHHHcC---CC--CCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc--c
Confidence            6789999999      99999  999999999998   33  35688999999999999999999999999987655  6


Q ss_pred             CCC-CCcHHHHHHHcCChHHHHHHHhcCCCCccccccCCCCCcHHHHHHHcCcHHHHHHHH
Q 005556          180 TNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLL  239 (691)
Q Consensus       180 ~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~Ai~~g~~~iv~~Ll  239 (691)
                      .+. |.||+|+|+..++.+++++|++.+.....   .+..|.||++.|+..++.+++++|+
T Consensus        69 ~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          69 RDKDGNTPLHLAARNGNLDVVKLLLKHGADVNA---RDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             cCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcc---cCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            677 99999999999999999999998755433   6788999999999999999998874

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.54  E-value=5.9e-14  Score=117.23  Aligned_cols=83  Identities=23%  Similarity=0.378  Sum_probs=40.8

Q ss_pred             ccchhccCCCCHHHHHHHHhccCCCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHH
Q 005556          113 LLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAA  191 (691)
Q Consensus       113 l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa  191 (691)
                      ||.||..|  +.++++.|++.+   ..  ++.    |+||||+||..|+.+++++|++.++++.  .++. |.||||+|+
T Consensus         1 L~~A~~~~--~~~~~~~ll~~~---~~--~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~--~~~~~g~t~L~~A~   67 (89)
T PF12796_consen    1 LHIAAQNG--NLEILKFLLEKG---AD--INL----GNTALHYAAENGNLEIVKLLLENGADIN--SQDKNGNTALHYAA   67 (89)
T ss_dssp             HHHHHHTT--THHHHHHHHHTT---ST--TTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT---BSTTSSBHHHHHH
T ss_pred             CHHHHHcC--CHHHHHHHHHCc---CC--CCC----CCCHHHHHHHcCCHHHHHHHHHhccccc--ccCCCCCCHHHHHH
Confidence            44555555  555555555543   22  111    5555555555555555555555555443  3334 555555555


Q ss_pred             HcCChHHHHHHHhcCCC
Q 005556          192 LFGHKDTFEYLLEETPG  208 (691)
Q Consensus       192 ~~g~~~iv~~Ll~~~~~  208 (691)
                      ..|+.+++++|++++++
T Consensus        68 ~~~~~~~~~~Ll~~g~~   84 (89)
T PF12796_consen   68 ENGNLEIVKLLLEHGAD   84 (89)
T ss_dssp             HTTHHHHHHHHHHTTT-
T ss_pred             HcCCHHHHHHHHHcCCC
Confidence            55555555555555443

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=99.53  E-value=1.1e-13  Score=150.19  Aligned_cols=159  Identities=13%  Similarity=0.149  Sum_probs=129.8

Q ss_pred             cHHHHHHHHcCCHHHHHHHHhcCh--------hhhhcccCCCCCcchhhhcccccchhc---cCCCCHHHHHHHHhccCC
Q 005556           68 HLELYRMIQMNDWQSVDGFVQSNT--------DILKEHNFLGRSLTIFHLIMGLLVDVE---TDDEATDLIDKLAQSTDV  136 (691)
Q Consensus        68 ~~~L~~Aa~~G~~~~v~~ll~~~~--------~~~~~~~~~~~g~T~Lh~~~~l~~Aa~---~g~~~~~iv~~Ll~~~~~  136 (691)
                      ..+++.|..+|+.+....++....        ..++.+  ...|.|.||.      |.-   .+  +.++++.|++..  
T Consensus       102 ~~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~R--Ga~GET~Lh~------~lL~~~~~--~n~la~~LL~~~--  169 (782)
T KOG3676|consen  102 RDALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNER--GATGETLLHK------ALLNLSDG--HNELARVLLEIF--  169 (782)
T ss_pred             hhhhhhccccccHHHHhccchhhhhhhhhhhhhccccc--cchhhhHHHH------HHhcCchh--HHHHHHHHHHHh--
Confidence            378999999999998888876642        334444  6679999999      765   55  679999999987  


Q ss_pred             CCCcccc----ccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcC------------CC----------C-CCcHHHH
Q 005556          137 DISETLS----CKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQ------------TN----------Q-NSLPVHL  189 (691)
Q Consensus       137 ~~~~~l~----~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~------------~n----------~-G~TpLh~  189 (691)
                       |.- ++    ...-.|.||||+|+.+.+.++|++|++.++|+. ..            ..          . |+.||-+
T Consensus       170 -p~l-ind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~-aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSf  246 (782)
T KOG3676|consen  170 -PKL-INDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVH-ARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSF  246 (782)
T ss_pred             -HHH-hhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchh-hHhhccccCcccccccccccCCcceeeeccCchHH
Confidence             443 22    234579999999999999999999999987653 21            11          2 8899999


Q ss_pred             HHHcCChHHHHHHHhcCCCCccccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCC
Q 005556          190 AALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPE  244 (691)
Q Consensus       190 Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~Ai~~g~~~iv~~Ll~~~~~  244 (691)
                      ||..++.|++++|++++++.+.   +|.+|+|.||.++..-..++-..+++.+++
T Consensus       247 AAC~nq~eivrlLl~~gAd~~a---qDS~GNTVLH~lVi~~~~~My~~~L~~ga~  298 (782)
T KOG3676|consen  247 AACTNQPEIVRLLLAHGADPNA---QDSNGNTVLHMLVIHFVTEMYDLALELGAN  298 (782)
T ss_pred             HHHcCCHHHHHHHHhcCCCCCc---cccCCChHHHHHHHHHHHHHHHHHHhcCCC
Confidence            9999999999999999998655   899999999999999888999999998765

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.51  E-value=6.2e-14  Score=117.07  Aligned_cols=87  Identities=21%  Similarity=0.261  Sum_probs=78.3

Q ss_pred             HHHHHHcCCHHHHHHHHHcCchhhhcCCCCCCcHHHHHHHcCChHHHHHHHhcCCCCccccccCCCCCcHHHHHHHcCcH
Q 005556          153 LSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLY  232 (691)
Q Consensus       153 Lh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~Ai~~g~~  232 (691)
                      ||+||+.|+.+++++|++.++++. .    |.||||+||..|+.+++++|++.+++...   +|.+|.||||+|+.+|+.
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~-~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~   72 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADIN-L----GNTALHYAAENGNLEIVKLLLENGADINS---QDKNGNTALHYAAENGNL   72 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTT-S----SSBHHHHHHHTTTHHHHHHHHHTTTCTT----BSTTSSBHHHHHHHTTHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCC-C----CCCHHHHHHHcCCHHHHHHHHHhcccccc---cCCCCCCHHHHHHHcCCH
Confidence            799999999999999999877665 2    88999999999999999999999987544   789999999999999999


Q ss_pred             HHHHHHHHhCCCCcc
Q 005556          233 DVALNLLKNHPEIVH  247 (691)
Q Consensus       233 ~iv~~Ll~~~~~~~~  247 (691)
                      +++++|+++++++..
T Consensus        73 ~~~~~Ll~~g~~~~~   87 (89)
T PF12796_consen   73 EIVKLLLEHGADVNI   87 (89)
T ss_dssp             HHHHHHHHTTT-TTS
T ss_pred             HHHHHHHHcCCCCCC
Confidence            999999999888764

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.44  E-value=1e-12  Score=116.74  Aligned_cols=121  Identities=25%  Similarity=0.363  Sum_probs=107.2

Q ss_pred             hhccHHHHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccc
Q 005556           65 YRRHLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSC  144 (691)
Q Consensus        65 ~~~~~~L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~  144 (691)
                      ..+.+|||.|+..|+.+.++.+++.+... ...  +..|.||||.      |+..+  +.++++.|++.+   +.  ++.
T Consensus         5 ~~g~t~l~~a~~~~~~~~i~~li~~~~~~-~~~--~~~g~~~l~~------a~~~~--~~~~~~~ll~~~---~~--~~~   68 (126)
T cd00204           5 EDGRTPLHLAASNGHLEVVKLLLENGADV-NAK--DNDGRTPLHL------AAKNG--HLEIVKLLLEKG---AD--VNA   68 (126)
T ss_pred             cCCCCHHHHHHHcCcHHHHHHHHHcCCCC-Ccc--CCCCCcHHHH------HHHcC--CHHHHHHHHHcC---CC--ccc
Confidence            34679999999999999999999887654 333  8899999999      99999  999999999997   43  677


Q ss_pred             cCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCChHHHHHHH
Q 005556          145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLL  203 (691)
Q Consensus       145 ~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll  203 (691)
                      .+..|.||+|+|+..++.+++++|++++.+..  ..+. |.||+++|...++.+++++|+
T Consensus        69 ~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          69 RDKDGNTPLHLAARNGNLDVVKLLLKHGADVN--ARDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             cCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCc--ccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            88999999999999999999999999886665  6677 999999999999999999885

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.39  E-value=4.5e-12  Score=125.55  Aligned_cols=126  Identities=24%  Similarity=0.306  Sum_probs=115.5

Q ss_pred             CCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCCCCChHHHHHHHcCC-----HHHHHHHHHcCc-
Q 005556          100 LGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGN-----LKASKILVKHKH-  173 (691)
Q Consensus       100 ~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~-----~~ivk~Ll~~~~-  173 (691)
                      +..+.+++|.      |+..|  ..++++.++..+   ..  ++.+|..|.||||+|+..|+     .+++++|++.++ 
T Consensus        70 ~~~~~~~~~~------~~~~~--~~~~~~~l~~~~---~~--~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~  136 (235)
T COG0666          70 DLDGRLPLHS------AASKG--DDKIVKLLLASG---AD--VNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGAD  136 (235)
T ss_pred             CccccCHHHH------HHHcC--cHHHHHHHHHcC---CC--cccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCC
Confidence            6678999999      99999  999999999987   44  58899999999999999999     999999999999 


Q ss_pred             -hhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCCCCccccccCCCCCcHHHHHHHcCcHHHHHHHHHhC
Q 005556          174 -ELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNH  242 (691)
Q Consensus       174 -~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~Ai~~g~~~iv~~Ll~~~  242 (691)
                       +.. ..+|. |.||||+|+..|+.+++++|++.+++...   ++..|.|+++.|+..++.++++.+++..
T Consensus       137 ~~~~-~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~---~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         137 LDVN-NLRDEDGNTPLHWAALNGDADIVELLLEAGADPNS---RNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             CCCc-cccCCCCCchhHHHHHcCchHHHHHHHhcCCCCcc---cccCCCcchhhhcccchHHHHHHHHhcC
Confidence             566 67788 99999999999999999999999887544   6899999999999999999999999976

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.35  E-value=5.2e-13  Score=100.12  Aligned_cols=56  Identities=14%  Similarity=0.095  Sum_probs=33.5

Q ss_pred             HHHHCCccccccccCCCcHHHHHHhcCChhHHHHHhcCCCcccccccccCCCCchhhhh
Q 005556          389 FIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHLT  447 (691)
Q Consensus       389 LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~D~~G~TpLHlA  447 (691)
                      ||+.++..++.+|..|+||||+|+.+|+.+++++|++.+   ++++.+|++|+||||+|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g---~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNG---ADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT-----TT---TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCc---CCCCCCcCCCCCHHHhC
Confidence            567777778899999999999999999999999999887   99999999999999998

>KOG4214 consensus Myotrophin and similar proteins [Transcription]

Probab=99.30  E-value=8.1e-12  Score=98.56  Aligned_cols=97  Identities=22%  Similarity=0.312  Sum_probs=82.0

Q ss_pred             hhccCCCCHHHHHHHHhccCCCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcC
Q 005556          116 DVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFG  194 (691)
Q Consensus       116 Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g  194 (691)
                      ++.+|  ..+-|+..+..+   -+  ++. -..|+||||+||-.|..+++++|+..++++.  .+++ |-|||.-|+..|
T Consensus         9 ~vkNG--~~DeVk~~v~~g---~n--Vn~-~~ggR~plhyAAD~GQl~ilefli~iGA~i~--~kDKygITPLLsAvwEG   78 (117)
T KOG4214|consen    9 NVKNG--EIDEVKQSVNEG---LN--VNE-IYGGRTPLHYAADYGQLSILEFLISIGANIQ--DKDKYGITPLLSAVWEG   78 (117)
T ss_pred             hhccC--cHHHHHHHHHcc---cc--HHH-HhCCcccchHhhhcchHHHHHHHHHhccccC--CccccCCcHHHHHHHHh
Confidence            89999  999999999887   11  222 2378999999999999999999999999887  8888 999999999999


Q ss_pred             ChHHHHHHHhcCCCCccccccCCCCCcHHHH
Q 005556          195 HKDTFEYLLEETPGRVENFYCGGDGGRLLSD  225 (691)
Q Consensus       195 ~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~  225 (691)
                      |.++|++|++.+++...   +..+|.+.+..
T Consensus        79 H~~cVklLL~~GAdrt~---~~PdG~~~~ea  106 (117)
T KOG4214|consen   79 HRDCVKLLLQNGADRTI---HAPDGTALIEA  106 (117)
T ss_pred             hHHHHHHHHHcCcccce---eCCCchhHHhh
Confidence            99999999999988544   67888776643

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.30  E-value=1e-11  Score=122.97  Aligned_cols=124  Identities=19%  Similarity=0.212  Sum_probs=112.8

Q ss_pred             hccHHHHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCC-----HHHHHHHHhccCCCC--
Q 005556           66 RRHLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEA-----TDLIDKLAQSTDVDI--  138 (691)
Q Consensus        66 ~~~~~L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~-----~~iv~~Ll~~~~~~~--  138 (691)
                      ...++++.++..|+.+.++.++..+.+. +.+  +..|.||||+      |+..|  +     .++++.|++.+   .  
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~--~~~g~t~l~~------a~~~~--~~~~~~~~~~~~ll~~g---~~~  137 (235)
T COG0666          72 DGRLPLHSAASKGDDKIVKLLLASGADV-NAK--DADGDTPLHL------AALNG--NPPEGNIEVAKLLLEAG---ADL  137 (235)
T ss_pred             cccCHHHHHHHcCcHHHHHHHHHcCCCc-ccc--cCCCCcHHHH------HHhcC--CcccchHHHHHHHHHcC---CCC
Confidence            3568999999999999998888887776 665  9999999999      99999  9     99999999998   4  


Q ss_pred             CccccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcC
Q 005556          139 SETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEET  206 (691)
Q Consensus       139 ~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~  206 (691)
                      .. .+.+|..|+||||+|+..|+.+++++|++.+++..  .++. |.||++.|+..|+.++++.+++.+
T Consensus       138 ~~-~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~--~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         138 DV-NNLRDEDGNTPLHWAALNGDADIVELLLEAGADPN--SRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             CC-ccccCCCCCchhHHHHHcCchHHHHHHHhcCCCCc--ccccCCCcchhhhcccchHHHHHHHHhcC
Confidence            33 67789999999999999999999999999999887  6678 999999999999999999999975

>KOG4214 consensus Myotrophin and similar proteins [Transcription]

Probab=99.29  E-value=1.2e-11  Score=97.64  Aligned_cols=102  Identities=14%  Similarity=0.153  Sum_probs=85.9

Q ss_pred             HHHHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCCC
Q 005556           69 LELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGG  148 (691)
Q Consensus        69 ~~L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~  148 (691)
                      ....+++++|+.+.|+..+.++-+ ++.   .-.|+||||+      |+..|  +.+++++|+..|   ++  ++.+|+.
T Consensus         4 ~~~~W~vkNG~~DeVk~~v~~g~n-Vn~---~~ggR~plhy------AAD~G--Ql~ilefli~iG---A~--i~~kDKy   66 (117)
T KOG4214|consen    4 MSVAWNVKNGEIDEVKQSVNEGLN-VNE---IYGGRTPLHY------AADYG--QLSILEFLISIG---AN--IQDKDKY   66 (117)
T ss_pred             hhHhhhhccCcHHHHHHHHHcccc-HHH---HhCCcccchH------hhhcc--hHHHHHHHHHhc---cc--cCCcccc
Confidence            456789999999999999988633 333   3489999999      99999  999999999998   55  7889999


Q ss_pred             CChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHH
Q 005556          149 GNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHL  189 (691)
Q Consensus       149 G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~  189 (691)
                      |-|||--|+..||.++|++|+..+++-.  .+.. |.+.+..
T Consensus        67 gITPLLsAvwEGH~~cVklLL~~GAdrt--~~~PdG~~~~ea  106 (117)
T KOG4214|consen   67 GITPLLSAVWEGHRDCVKLLLQNGADRT--IHAPDGTALIEA  106 (117)
T ss_pred             CCcHHHHHHHHhhHHHHHHHHHcCcccc--eeCCCchhHHhh
Confidence            9999999999999999999999998765  4455 6655443

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]

Probab=99.28  E-value=6.6e-12  Score=128.63  Aligned_cols=116  Identities=17%  Similarity=0.161  Sum_probs=54.9

Q ss_pred             HHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCCCCC
Q 005556           71 LYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGN  150 (691)
Q Consensus        71 L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~  150 (691)
                      |..|+..|.++.|+..+.+-.+ ....  +.+|-|+||-      |+..|  |.+||++|++.|   .+  +|..|.+|+
T Consensus       554 LLDaaLeGEldlVq~~i~ev~D-pSqp--NdEGITaLHN------AiCag--hyeIVkFLi~~g---an--VNa~DSdGW  617 (752)
T KOG0515|consen  554 LLDAALEGELDLVQRIIYEVTD-PSQP--NDEGITALHN------AICAG--HYEIVKFLIEFG---AN--VNAADSDGW  617 (752)
T ss_pred             HHhhhhcchHHHHHHHHHhhcC-CCCC--CccchhHHhh------hhhcc--hhHHHHHHHhcC---Cc--ccCccCCCC
Confidence            4445555555555555443111 1122  4445555555      55555  555555555554   32  455555555


Q ss_pred             hHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHH--HcCChHHHHHHH
Q 005556          151 TVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAA--LFGHKDTFEYLL  203 (691)
Q Consensus       151 TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa--~~g~~~iv~~Ll  203 (691)
                      ||||+||..+++.+|+.|++.++.+. ...-. ++||..-+-  +.|..++.+||.
T Consensus       618 TPLHCAASCNnv~~ckqLVe~Gaavf-AsTlSDmeTa~eKCee~eeGY~~CsqyL~  672 (752)
T KOG0515|consen  618 TPLHCAASCNNVPMCKQLVESGAAVF-ASTLSDMETAAEKCEEMEEGYDQCSQYLY  672 (752)
T ss_pred             chhhhhhhcCchHHHHHHHhccceEE-eeecccccchhhhcchhhhhHHHHHHHHH
Confidence            55555555555555555555555444 22223 444443331  234444444443

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.27  E-value=8.5e-12  Score=93.05  Aligned_cols=53  Identities=34%  Similarity=0.543  Sum_probs=36.4

Q ss_pred             CChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCChHHHHHHH
Q 005556          149 GNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLL  203 (691)
Q Consensus       149 G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll  203 (691)
                      |+||||+||+.|+.+++++|++.+.++.  .+|. |.||||+|+..|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din--~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADIN--AQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT---B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCC--CCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            6778888888888888888887777766  4566 888888888888888887775

...

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]

Probab=99.23  E-value=3.7e-11  Score=114.64  Aligned_cols=121  Identities=15%  Similarity=0.219  Sum_probs=101.7

Q ss_pred             cHHHHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCC
Q 005556           68 HLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDG  147 (691)
Q Consensus        68 ~~~L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~  147 (691)
                      ..||+.++..||.+....||.. ....+..  |++|.|+|..      |+..|  +.+.|+.|++.|   .+- -..++.
T Consensus        13 ~~~Lle~i~Kndt~~a~~LLs~-vr~vn~~--D~sGMs~Lah------AaykG--nl~~v~lll~~g---aDv-N~~qhg   77 (396)
T KOG1710|consen   13 KSPLLEAIDKNDTEAALALLST-VRQVNQR--DPSGMSVLAH------AAYKG--NLTLVELLLELG---ADV-NDKQHG   77 (396)
T ss_pred             hhHHHHHHccCcHHHHHHHHHH-hhhhhcc--CCCcccHHHH------HHhcC--cHHHHHHHHHhC---CCc-Cccccc
Confidence            3789999999999999999876 4445565  9999999999      99999  999999999998   332 344788


Q ss_pred             CCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhc
Q 005556          148 GGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEE  205 (691)
Q Consensus       148 ~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~  205 (691)
                      .+.||||+||-+|+.+++++|++.++..-  ..|. |+|+-.+||.-|+-++|..+-.+
T Consensus        78 ~~YTpLmFAALSGn~dvcrllldaGa~~~--~vNsvgrTAaqmAAFVG~H~CV~iINN~  134 (396)
T KOG1710|consen   78 TLYTPLMFAALSGNQDVCRLLLDAGARMY--LVNSVGRTAAQMAAFVGHHECVAIINNH  134 (396)
T ss_pred             ccccHHHHHHHcCCchHHHHHHhccCccc--cccchhhhHHHHHHHhcchHHHHHHhcc
Confidence            89999999999999999999999988765  7788 99999999999999888876444

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.22  E-value=1.1e-11  Score=93.02  Aligned_cols=55  Identities=22%  Similarity=0.352  Sum_probs=27.9

Q ss_pred             HHhccCCCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHH
Q 005556          130 LAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLA  190 (691)
Q Consensus       130 Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~A  190 (691)
                      ||+++   +.+ ++.+|..|+||||+||+.|+.++|++|++.+.++.  .+|. |+||||+|
T Consensus         1 LL~~~---~~~-~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~--~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHG---PAD-VNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPN--AKDKDGQTPLHYA   56 (56)
T ss_dssp             --------T---TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT-----TTS--HHHH-
T ss_pred             CCccC---cCC-CcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCC--CCcCCCCCHHHhC
Confidence            44554   444 77788888888888888888888888887777665  7777 88888886

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]

Probab=99.21  E-value=5.6e-11  Score=113.39  Aligned_cols=121  Identities=17%  Similarity=0.195  Sum_probs=108.5

Q ss_pred             cchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-
Q 005556          104 LTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-  182 (691)
Q Consensus       104 ~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-  182 (691)
                      ..||.-      +...|  ..+-...|+...    +. ++.+|..|.|||..|+..|+.++|++|++.++|++ ..+.. 
T Consensus        13 ~~~Lle------~i~Kn--dt~~a~~LLs~v----r~-vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN-~~qhg~   78 (396)
T KOG1710|consen   13 KSPLLE------AIDKN--DTEAALALLSTV----RQ-VNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVN-DKQHGT   78 (396)
T ss_pred             hhHHHH------HHccC--cHHHHHHHHHHh----hh-hhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcC-cccccc
Confidence            467777      99999  999999999874    33 78899999999999999999999999999999999 77777 


Q ss_pred             CCcHHHHHHHcCChHHHHHHHhcCCCCccccccCCCCCcHHHHHHHcCcHHHHHHHHHh
Q 005556          183 NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKN  241 (691)
Q Consensus       183 G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~Ai~~g~~~iv~~Ll~~  241 (691)
                      +-||||+||..|+.++.++|++.|+....   .|.-|+|+-..|+.-|+.++|..+=..
T Consensus        79 ~YTpLmFAALSGn~dvcrllldaGa~~~~---vNsvgrTAaqmAAFVG~H~CV~iINN~  134 (396)
T KOG1710|consen   79 LYTPLMFAALSGNQDVCRLLLDAGARMYL---VNSVGRTAAQMAAFVGHHECVAIINNH  134 (396)
T ss_pred             cccHHHHHHHcCCchHHHHHHhccCcccc---ccchhhhHHHHHHHhcchHHHHHHhcc
Confidence            99999999999999999999999988654   688999999999999999999876544

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.19  E-value=2.8e-11  Score=90.25  Aligned_cols=54  Identities=22%  Similarity=0.369  Sum_probs=44.6

Q ss_pred             CcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCCCCChHHHHHHHcCCHHHHHHHH
Q 005556          103 SLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILV  169 (691)
Q Consensus       103 g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll  169 (691)
                      |+||||+      ||..|  +.++++.|++.+   .+  ++.+|.+|+||||+|+..|+.+++++|+
T Consensus         1 g~t~lh~------A~~~g--~~~~~~~Ll~~~---~d--in~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHW------AARSG--NLEIVKLLLEHG---AD--INAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHH------HHHTT---HHHHHHHHHTT---SG--TT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHH------HHHhC--CHHHHHHHHHCC---CC--CCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            7899999      99999  999999999997   44  7778999999999999999999999986

...

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]

Probab=99.16  E-value=7.1e-11  Score=121.20  Aligned_cols=125  Identities=16%  Similarity=0.140  Sum_probs=105.8

Q ss_pred             cchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-
Q 005556          104 LTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-  182 (691)
Q Consensus       104 ~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-  182 (691)
                      -.||-+   |+.|+..|  ..|+|+..+...   . | ....|..|-|+||-|+..||.+||++|++.+.+++  ..|. 
T Consensus       548 fnPLaL---LLDaaLeG--EldlVq~~i~ev---~-D-pSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVN--a~DSd  615 (752)
T KOG0515|consen  548 FNPLAL---LLDAALEG--ELDLVQRIIYEV---T-D-PSQPNDEGITALHNAICAGHYEIVKFLIEFGANVN--AADSD  615 (752)
T ss_pred             cchHHH---HHhhhhcc--hHHHHHHHHHhh---c-C-CCCCCccchhHHhhhhhcchhHHHHHHHhcCCccc--CccCC
Confidence            367777   88899999  999999999886   2 2 45579999999999999999999999999999987  8888 


Q ss_pred             CCcHHHHHHHcCChHHHHHHHhcCCCCccccccCCCCCcHHHHHH--HcCcHHHHHHHHHhC
Q 005556          183 NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLI--KANLYDVALNLLKNH  242 (691)
Q Consensus       183 G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~Ai--~~g~~~iv~~Ll~~~  242 (691)
                      |+||||+||.+++..+++.|++.|+..-.  .+=.++.|+..-|-  +.|+.++.++|-.-.
T Consensus       616 GWTPLHCAASCNnv~~ckqLVe~GaavfA--sTlSDmeTa~eKCee~eeGY~~CsqyL~~vq  675 (752)
T KOG0515|consen  616 GWTPLHCAASCNNVPMCKQLVESGAAVFA--STLSDMETAAEKCEEMEEGYDQCSQYLYGVQ  675 (752)
T ss_pred             CCchhhhhhhcCchHHHHHHHhccceEEe--eecccccchhhhcchhhhhHHHHHHHHHHHH
Confidence            99999999999999999999999987533  24567788887764  567888999887553

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.12  E-value=1.6e-10  Score=131.97  Aligned_cols=100  Identities=14%  Similarity=0.155  Sum_probs=84.5

Q ss_pred             chhccCCCCHHHHHHHHhccCCCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHc
Q 005556          115 VDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALF  193 (691)
Q Consensus       115 ~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~  193 (691)
                      .|+..|  +.+.++.|++.+   .+  ++.+|..|+||||+||..|+.++|++|++.++++.  .+|. |.||||+|+..
T Consensus        88 ~aa~~G--~~~~vk~LL~~G---ad--in~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn--~~d~~G~TpLh~A~~~  158 (664)
T PTZ00322         88 QLAASG--DAVGARILLTGG---AD--PNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPT--LLDKDGKTPLELAEEN  158 (664)
T ss_pred             HHHHcC--CHHHHHHHHHCC---CC--CCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCC--CCCCCCCCHHHHHHHC
Confidence            399999  999999999987   44  67889999999999999999999999999998876  7888 99999999999


Q ss_pred             CChHHHHHHHhc-------CCCCccccccCCCCCcHHHHH
Q 005556          194 GHKDTFEYLLEE-------TPGRVENFYCGGDGGRLLSDL  226 (691)
Q Consensus       194 g~~~iv~~Ll~~-------~~~~~~~~~~~~~G~t~Lh~A  226 (691)
                      |+.+++++|+++       +++..   ..+.+|.+++..+
T Consensus       159 g~~~iv~~Ll~~~~~~~~~ga~~~---~~~~~g~~~~~~~  195 (664)
T PTZ00322        159 GFREVVQLLSRHSQCHFELGANAK---PDSFTGKPPSLED  195 (664)
T ss_pred             CcHHHHHHHHhCCCcccccCCCCC---ccccCCCCccchh
Confidence            999999999988       33322   2456666665543

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.08  E-value=3.8e-10  Score=128.84  Aligned_cols=86  Identities=21%  Similarity=0.208  Sum_probs=80.0

Q ss_pred             hHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCCCCccccccCCCCCcHHHHHHHc
Q 005556          151 TVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKA  229 (691)
Q Consensus       151 TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~Ai~~  229 (691)
                      +.||.||..|+.++++.|++.+++++  .+|. |.||||+||..|+.+++++|++.+++.+.   +|.+|.||||+|+..
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~Gadin--~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~---~d~~G~TpLh~A~~~  158 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTGGADPN--CRDYDGRTPLHIACANGHVQVVRVLLEFGADPTL---LDKDGKTPLELAEEN  158 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCC--CcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCC---CCCCCCCHHHHHHHC
Confidence            45889999999999999999998876  7788 99999999999999999999999988544   799999999999999


Q ss_pred             CcHHHHHHHHHh
Q 005556          230 NLYDVALNLLKN  241 (691)
Q Consensus       230 g~~~iv~~Ll~~  241 (691)
                      |+.+++++|+++
T Consensus       159 g~~~iv~~Ll~~  170 (664)
T PTZ00322        159 GFREVVQLLSRH  170 (664)
T ss_pred             CcHHHHHHHHhC
Confidence            999999999998

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]

Probab=98.80  E-value=1e-08  Score=106.19  Aligned_cols=121  Identities=21%  Similarity=0.246  Sum_probs=108.3

Q ss_pred             HHHHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCCC
Q 005556           69 LELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGG  148 (691)
Q Consensus        69 ~~L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~  148 (691)
                      ..+..|+..+|.-.+.+....+++.+ .+  +.+..|.||+      |+..|  +-++|+++++++   |..++++.|..
T Consensus       868 eeil~av~~~D~~klqE~h~~gg~ll-~~--~~~~~sllh~------a~~tg--~~eivkyildh~---p~elld~~de~  933 (1004)
T KOG0782|consen  868 EEILRAVLSSDLMKLQETHLNGGSLL-IQ--GPDHCSLLHY------AAKTG--NGEIVKYILDHG---PSELLDMADET  933 (1004)
T ss_pred             HHHHHHHHhccHHHHHHHHhcCCceE-ee--CcchhhHHHH------HHhcC--ChHHHHHHHhcC---CHHHHHHHhhh
Confidence            45899999999888888877777664 33  7888999999      99999  999999999999   77779999999


Q ss_pred             CChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhc
Q 005556          149 GNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEE  205 (691)
Q Consensus       149 G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~  205 (691)
                      |.|+||-||..++-.++++|++.++.+.  ..+. |.||-..|-..|..++.-||-..
T Consensus       934 get~lhkaa~~~~r~vc~~lvdagasl~--ktd~kg~tp~eraqqa~d~dlaayle~r  989 (1004)
T KOG0782|consen  934 GETALHKAACQRNRAVCQLLVDAGASLR--KTDSKGKTPQERAQQAGDPDLAAYLESR  989 (1004)
T ss_pred             hhHHHHHHHHhcchHHHHHHHhcchhhe--ecccCCCChHHHHHhcCCchHHHHHhhh
Confidence            9999999999999999999999999887  7777 99999999999999999998655

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]

Probab=98.53  E-value=2.3e-07  Score=96.35  Aligned_cols=98  Identities=17%  Similarity=0.161  Sum_probs=88.2

Q ss_pred             ccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCCCCccccccCCCCC
Q 005556          142 LSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGG  220 (691)
Q Consensus       142 l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~  220 (691)
                      +-.++.+..|-||+|+..|+-++|+|+++++|.-+++..+. |+|+||-|+..++..+..+|++.++...   ..|..|.
T Consensus       892 ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~---ktd~kg~  968 (1004)
T KOG0782|consen  892 LLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLR---KTDSKGK  968 (1004)
T ss_pred             eEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhhe---ecccCCC
Confidence            77789999999999999999999999999998543378888 9999999999999999999999998743   4799999


Q ss_pred             cHHHHHHHcCcHHHHHHHHHhC
Q 005556          221 RLLSDLIKANLYDVALNLLKNH  242 (691)
Q Consensus       221 t~Lh~Ai~~g~~~iv~~Ll~~~  242 (691)
                      ||-..|-..|+.|++-+|-.+.
T Consensus       969 tp~eraqqa~d~dlaayle~rq  990 (1004)
T KOG0782|consen  969 TPQERAQQAGDPDLAAYLESRQ  990 (1004)
T ss_pred             ChHHHHHhcCCchHHHHHhhhh
Confidence            9999999999999999987663

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=98.46  E-value=3.1e-06  Score=93.53  Aligned_cols=126  Identities=20%  Similarity=0.130  Sum_probs=101.9

Q ss_pred             hhccCCCCHHHHHHHHhccCCCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCCCCcHHHHHHHcCC
Q 005556          116 DVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGH  195 (691)
Q Consensus       116 Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~G~TpLh~Aa~~g~  195 (691)
                      |++.|  +.-.|+..++.... +...++.+|.-|.++||+|..+.|.+++++|++..-+.        .-+|.+|+..|.
T Consensus        32 a~E~g--d~~~V~k~l~~~~~-~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~--------gdALL~aI~~~~  100 (822)
T KOG3609|consen   32 AHENG--DVPLVAKALEYKAV-SKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE--------GDALLLAIAVGS  100 (822)
T ss_pred             HHHcC--ChHHHHHHHHhccc-cccchhccChHhhhceecccccccHHHHHHHhcCcccc--------chHHHHHHHHHH
Confidence            99999  99999999998743 33348889999999999999999999999999864322        248999999999


Q ss_pred             hHHHHHHHhcCCCCc-------cccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCCccCCCCC
Q 005556          196 KDTFEYLLEETPGRV-------ENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQ  252 (691)
Q Consensus       196 ~~iv~~Ll~~~~~~~-------~~~~~~~~G~t~Lh~Ai~~g~~~iv~~Ll~~~~~~~~~~d~~  252 (691)
                      .+.|+.++.+.....       .....-..+.|||..|+..+++|+++.|++++..+....+..
T Consensus       101 v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~PH~~~  164 (822)
T KOG3609|consen  101 VPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPIPHDIR  164 (822)
T ss_pred             HHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCCCcccc
Confidence            999999998764321       111234457899999999999999999999998877654443

>PF13606 Ank_3: Ankyrin repeat

Probab=98.42  E-value=2.3e-07  Score=59.22  Aligned_cols=28  Identities=39%  Similarity=0.612  Sum_probs=19.4

Q ss_pred             CCChHHHHHHHcCCHHHHHHHHHcCchh
Q 005556          148 GGNTVLSLCAIRGNLKASKILVKHKHEL  175 (691)
Q Consensus       148 ~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l  175 (691)
                      +|+||||+||+.|+.++|++|+++++++
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadv   28 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADV   28 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence            4677777777777777777777766654

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]

Probab=98.39  E-value=1.2e-06  Score=90.12  Aligned_cols=97  Identities=20%  Similarity=0.162  Sum_probs=87.0

Q ss_pred             ccccCCCCChH------HHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCCCCccccc
Q 005556          142 LSCKDGGGNTV------LSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFY  214 (691)
Q Consensus       142 l~~~d~~G~Tp------Lh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~  214 (691)
                      +..+|.+|.|.      ||-.++.|+.+.+-.|+..+++.+ ..... |.||||.|++.|+..-+++|+-+|++...   
T Consensus       120 ~~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N-~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a---  195 (669)
T KOG0818|consen  120 LPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQAN-FFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGA---  195 (669)
T ss_pred             CCCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccC-CCCcccCCchhHHHHhccchhhhhHHhhccCCCCC---
Confidence            45578888875      999999999999999999999998 66666 99999999999999999999999999765   


Q ss_pred             cCCCCCcHHHHHHHcCcHHHHHHHHHhC
Q 005556          215 CGGDGGRLLSDLIKANLYDVALNLLKNH  242 (691)
Q Consensus       215 ~~~~G~t~Lh~Ai~~g~~~iv~~Ll~~~  242 (691)
                      .|.+|.||+.+|-..||.++++.|++..
T Consensus       196 ~d~~GmtP~~~AR~~gH~~laeRl~e~~  223 (669)
T KOG0818|consen  196 QDSSGMTPVDYARQGGHHELAERLVEIQ  223 (669)
T ss_pred             CCCCCCcHHHHHHhcCchHHHHHHHHHH
Confidence            7999999999999999999999998763

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]

Probab=98.35  E-value=6.3e-07  Score=91.70  Aligned_cols=87  Identities=15%  Similarity=0.154  Sum_probs=43.7

Q ss_pred             HHHHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCCC
Q 005556           69 LELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGG  148 (691)
Q Consensus        69 ~~L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~  148 (691)
                      .++++|+..||...++++.-.+.+. ..+  |.+.+|+||+      ||..|  +++++++|++..   ..+ .+.+|..
T Consensus       508 i~~~~aa~~GD~~alrRf~l~g~D~-~~~--DyD~RTaLHv------AAaEG--~v~v~kfl~~~~---kv~-~~~kDRw  572 (622)
T KOG0506|consen  508 INVMYAAKNGDLSALRRFALQGMDL-ETK--DYDDRTALHV------AAAEG--HVEVVKFLLNAC---KVD-PDPKDRW  572 (622)
T ss_pred             hhhhhhhhcCCHHHHHHHHHhcccc-ccc--ccccchhhee------ecccC--ceeHHHHHHHHH---cCC-CChhhcc
Confidence            3455555555555555555443332 233  4555555555      55555  555555555554   222 2335555


Q ss_pred             CChHHHHHHHcCCHHHHHHHHH
Q 005556          149 GNTVLSLCAIRGNLKASKILVK  170 (691)
Q Consensus       149 G~TpLh~Aa~~G~~~ivk~Ll~  170 (691)
                      |+|||--|-..+|.+++++|-+
T Consensus       573 ~rtPlDdA~~F~h~~v~k~L~~  594 (622)
T KOG0506|consen  573 GRTPLDDAKHFKHKEVVKLLEE  594 (622)
T ss_pred             CCCcchHhHhcCcHHHHHHHHH
Confidence            5555555555555555555544

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]

Probab=98.35  E-value=2.3e-07  Score=100.71  Aligned_cols=82  Identities=20%  Similarity=0.217  Sum_probs=75.3

Q ss_pred             ccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC--CCcHHHHHHHcCChHHHHHHHhcCCCCccccccCCCC
Q 005556          142 LSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ--NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDG  219 (691)
Q Consensus       142 l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~--G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G  219 (691)
                      .+++|..|+|+||+|+..|..++++.|++++.++.  .+|.  |.||||.|..+|+.|++-.||+++...   .+.|++|
T Consensus        45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~--vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL---~i~Dkeg  119 (1267)
T KOG0783|consen   45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVF--VQDEESGYTALHRAIYYGNIDCASLLLSKGRSL---RIKDKEG  119 (1267)
T ss_pred             hhHHHhhccceeeeeeccchhHHHHHHHhcCceee--eccccccchHhhHhhhhchHHHHHHHHhcCCce---EEecccC
Confidence            78899999999999999999999999999999988  5665  999999999999999999999999763   3589999


Q ss_pred             CcHHHHHHH
Q 005556          220 GRLLSDLIK  228 (691)
Q Consensus       220 ~t~Lh~Ai~  228 (691)
                      ..||..-++
T Consensus       120 lsplq~~~r  128 (1267)
T KOG0783|consen  120 LSPLQFLSR  128 (1267)
T ss_pred             CCHHHHHhh
Confidence            999988776

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.35  E-value=5.3e-07  Score=59.26  Aligned_cols=33  Identities=12%  Similarity=0.167  Sum_probs=23.9

Q ss_pred             CCCcHHHHHHhcCChhHHHHHhcCCCcccccccccC
Q 005556          403 QNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDK  438 (691)
Q Consensus       403 ~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~D~  438 (691)
                      +|+||||+|+++|+.+++++|++.|   ++++.+|+
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~g---a~~~~~d~   33 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHG---ADINARDN   33 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTT---SCTTCBCT
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCc---CCCCCCCC
Confidence            4777777777777777777777776   77776664

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]

Probab=98.30  E-value=8.9e-07  Score=96.28  Aligned_cols=103  Identities=17%  Similarity=0.253  Sum_probs=85.0

Q ss_pred             HHHcCCHHHHHHHHhc-ChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCC-CCCh
Q 005556           74 MIQMNDWQSVDGFVQS-NTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDG-GGNT  151 (691)
Q Consensus        74 Aa~~G~~~~v~~ll~~-~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~-~G~T  151 (691)
                      +.-.|....++.++++ +.+..+.+  |..|+|+||+      |+..|  ..++++.|+++|   ..  +..+|. .|+|
T Consensus        24 ~~tKs~~Nqlk~F~~k~c~n~anik--D~~GR~alH~------~~S~~--k~~~l~wLlqhG---id--v~vqD~ESG~t   88 (1267)
T KOG0783|consen   24 SKTKSEPNQLKGFSEKSCQNLANIK--DRYGRTALHI------AVSEN--KNSFLRWLLQHG---ID--VFVQDEESGYT   88 (1267)
T ss_pred             hhhcCChhHHHHHHHHhhhhhhhHH--Hhhccceeee------eeccc--hhHHHHHHHhcC---ce--eeeccccccch
Confidence            3334455457777776 34455565  9999999999      99999  999999999998   44  666664 6999


Q ss_pred             HHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHc
Q 005556          152 VLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALF  193 (691)
Q Consensus       152 pLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~  193 (691)
                      |||-|...||+|++-.|+.++..+-  .+|+ |..||..-++-
T Consensus        89 aLHRaiyyG~idca~lLL~~g~SL~--i~Dkeglsplq~~~r~  129 (1267)
T KOG0783|consen   89 ALHRAIYYGNIDCASLLLSKGRSLR--IKDKEGLSPLQFLSRV  129 (1267)
T ss_pred             HhhHhhhhchHHHHHHHHhcCCceE--EecccCCCHHHHHhhc
Confidence            9999999999999999999998775  8899 99999998873

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.30  E-value=1.5e-06  Score=90.68  Aligned_cols=90  Identities=21%  Similarity=0.262  Sum_probs=73.8

Q ss_pred             chhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-C
Q 005556          105 TIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-N  183 (691)
Q Consensus       105 T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G  183 (691)
                      -|||.      ++...  ..+-...++...  .... ++.+|..|+||||+|+..|+.+.++.|+..+++..  .+|+ |
T Consensus        22 ~~lh~------~~~~~--~~~sl~~el~~~--~~~~-id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~--~kN~~g   88 (560)
T KOG0522|consen   22 KPLHW------AVVTT--DSDSLEQELLAK--VSLV-IDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVS--IKNNEG   88 (560)
T ss_pred             cccch------hhhcc--chhhHHHHHhhh--hhce-eccccCCCCccHHHHHHhcCHHHHHHHHhcCCCcc--cccccc
Confidence            45888      88888  665555444332  1222 88899999999999999999999999999999887  8899 9


Q ss_pred             CcHHHHHHHcCChHHHHHHHhcCC
Q 005556          184 SLPVHLAALFGHKDTFEYLLEETP  207 (691)
Q Consensus       184 ~TpLh~Aa~~g~~~iv~~Ll~~~~  207 (691)
                      ++|||.|+..|+.+++..++.+..
T Consensus        89 Ws~L~EAv~~g~~q~i~~vlr~~~  112 (560)
T KOG0522|consen   89 WSPLHEAVSTGNEQIITEVLRHLK  112 (560)
T ss_pred             ccHHHHHHHcCCHHHHHHHHHHhH
Confidence            999999999999999988887743

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]

Probab=98.30  E-value=5.6e-07  Score=92.06  Aligned_cols=82  Identities=21%  Similarity=0.281  Sum_probs=47.2

Q ss_pred             hhccCCCCHHHHHHHHhccCCCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcC
Q 005556          116 DVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFG  194 (691)
Q Consensus       116 Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g  194 (691)
                      |+..|  +...++.+.-.+    .+ ++.+|.+.+|+||.||..|+++++|+|++.+.... ..+|. |+|||--|-..+
T Consensus       513 aa~~G--D~~alrRf~l~g----~D-~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~-~~kDRw~rtPlDdA~~F~  584 (622)
T KOG0506|consen  513 AAKNG--DLSALRRFALQG----MD-LETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDP-DPKDRWGRTPLDDAKHFK  584 (622)
T ss_pred             hhhcC--CHHHHHHHHHhc----cc-ccccccccchhheeecccCceeHHHHHHHHHcCCC-ChhhccCCCcchHhHhcC
Confidence            66666  655555554443    12 55556666666666666666666666666555444 45555 666666666666


Q ss_pred             ChHHHHHHHhc
Q 005556          195 HKDTFEYLLEE  205 (691)
Q Consensus       195 ~~~iv~~Ll~~  205 (691)
                      |.+++++|-+.
T Consensus       585 h~~v~k~L~~~  595 (622)
T KOG0506|consen  585 HKEVVKLLEEA  595 (622)
T ss_pred             cHHHHHHHHHH
Confidence            66666655544

>PF13606 Ank_3: Ankyrin repeat

Probab=98.29  E-value=7.4e-07  Score=56.84  Aligned_cols=24  Identities=8%  Similarity=0.088  Sum_probs=11.9

Q ss_pred             CCcHHHHHHhcCChhHHHHHhcCC
Q 005556          404 NHGIFELAVLHRREKVFNLIHGVN  427 (691)
Q Consensus       404 G~T~Lh~A~~~~~~~iv~~Ll~~~  427 (691)
                      |+||||+|+++|+.+++++|+++|
T Consensus         2 G~T~Lh~A~~~g~~e~v~~Ll~~g   25 (30)
T PF13606_consen    2 GNTPLHLAASNGNIEIVKYLLEHG   25 (30)
T ss_pred             CCCHHHHHHHhCCHHHHHHHHHcC
Confidence            445555555555555555555444

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.22  E-value=1.4e-06  Score=57.23  Aligned_cols=29  Identities=38%  Similarity=0.535  Sum_probs=18.7

Q ss_pred             CCChHHHHHHHcCCHHHHHHHHHcCchhh
Q 005556          148 GGNTVLSLCAIRGNLKASKILVKHKHELL  176 (691)
Q Consensus       148 ~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~  176 (691)
                      +|+||||+||..|+.+++++|++.++++.
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~   29 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADIN   29 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTT
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCC
Confidence            36666666666666666666666666554

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.13  E-value=4e-06  Score=87.65  Aligned_cols=91  Identities=16%  Similarity=0.138  Sum_probs=77.2

Q ss_pred             HHHHHHHHcCCHHHHHHHHhcChh-hhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCC
Q 005556           69 LELYRMIQMNDWQSVDGFVQSNTD-ILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDG  147 (691)
Q Consensus        69 ~~L~~Aa~~G~~~~v~~ll~~~~~-~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~  147 (691)
                      .|||.++...+++.....+..... .+..  .|..|+||||+      |+.-|  |.+.++.|+..+   +.  +..+|+
T Consensus        22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~--~D~~g~TpLhl------AV~Lg--~~~~a~~Ll~a~---Ad--v~~kN~   86 (560)
T KOG0522|consen   22 KPLHWAVVTTDSDSLEQELLAKVSLVIDR--RDPPGRTPLHL------AVRLG--HVEAARILLSAG---AD--VSIKNN   86 (560)
T ss_pred             cccchhhhccchhhHHHHHhhhhhceecc--ccCCCCccHHH------HHHhc--CHHHHHHHHhcC---CC--cccccc
Confidence            569999999999988876665422 2333  48999999999      99999  999999999997   44  788999


Q ss_pred             CCChHHHHHHHcCCHHHHHHHHHcCch
Q 005556          148 GGNTVLSLCAIRGNLKASKILVKHKHE  174 (691)
Q Consensus       148 ~G~TpLh~Aa~~G~~~ivk~Ll~~~~~  174 (691)
                      .|++|||.|+..|+.+++..++.+...
T Consensus        87 ~gWs~L~EAv~~g~~q~i~~vlr~~~~  113 (560)
T KOG0522|consen   87 EGWSPLHEAVSTGNEQIITEVLRHLKY  113 (560)
T ss_pred             ccccHHHHHHHcCCHHHHHHHHHHhHH
Confidence            999999999999999999999987553

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]

Probab=98.09  E-value=5.5e-06  Score=86.90  Aligned_cols=88  Identities=18%  Similarity=0.271  Sum_probs=56.4

Q ss_pred             hhccCCCCHHHHHHHHhccCCCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcC
Q 005556          116 DVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFG  194 (691)
Q Consensus       116 Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g  194 (691)
                      |+...  +...+-.||.+|...... -...+.+|+|+||+||+.||+.+.++|+=.+.+..  .+|. |.|+|.||-+.|
T Consensus       631 A~~~~--Dl~t~~lLLAhg~~~e~~-~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~--~rda~g~t~l~yar~a~  705 (749)
T KOG0705|consen  631 AVAAE--DLQTAILLLAHGSREEVN-ETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVM--ARDAHGRTALFYARQAG  705 (749)
T ss_pred             HHHHH--HHHHHHHHHhccCchhhh-ccccCCCCcchhhhhhhhcchhHHHHHHHhCccce--ecccCCchhhhhHhhcc
Confidence            55555  666666777766211111 22345566777777777777777777776666654  6666 777777777777


Q ss_pred             ChHHHHHHHhcCCC
Q 005556          195 HKDTFEYLLEETPG  208 (691)
Q Consensus       195 ~~~iv~~Ll~~~~~  208 (691)
                      ..|++..|+++++.
T Consensus       706 sqec~d~llq~gcp  719 (749)
T KOG0705|consen  706 SQECIDVLLQYGCP  719 (749)
T ss_pred             cHHHHHHHHHcCCC
Confidence            77777777777643

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]

Probab=98.07  E-value=1.3e-05  Score=82.73  Aligned_cols=89  Identities=12%  Similarity=0.085  Sum_probs=77.0

Q ss_pred             cHHHHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCC
Q 005556           68 HLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDG  147 (691)
Q Consensus        68 ~~~L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~  147 (691)
                      ...||..++.|+.+...+||..+.+.-..  ....|.||||+      |+..|  +.--++.|+-+|   ++  +...|.
T Consensus       134 srQLhasvRt~nlet~LRll~lGA~~N~~--hpekg~TpLHv------AAk~G--q~~Q~ElL~vYG---AD--~~a~d~  198 (669)
T KOG0818|consen  134 SKQLHSSVRTGNLETCLRLLSLGAQANFF--HPEKGNTPLHV------AAKAG--QILQAELLAVYG---AD--PGAQDS  198 (669)
T ss_pred             HHHHHHHhhcccHHHHHHHHHcccccCCC--CcccCCchhHH------HHhcc--chhhhhHHhhcc---CC--CCCCCC
Confidence            45699999999999999999887765332  36679999999      99999  999999999998   44  677899


Q ss_pred             CCChHHHHHHHcCCHHHHHHHHHc
Q 005556          148 GGNTVLSLCAIRGNLKASKILVKH  171 (691)
Q Consensus       148 ~G~TpLh~Aa~~G~~~ivk~Ll~~  171 (691)
                      +|.||+.+|-..||-++.+.|++.
T Consensus       199 ~GmtP~~~AR~~gH~~laeRl~e~  222 (669)
T KOG0818|consen  199 SGMTPVDYARQGGHHELAERLVEI  222 (669)
T ss_pred             CCCcHHHHHHhcCchHHHHHHHHH
Confidence            999999999999999999988887

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=97.98  E-value=2.9e-05  Score=86.03  Aligned_cols=120  Identities=13%  Similarity=0.110  Sum_probs=97.0

Q ss_pred             cHHHHHHHHcCCHHHHHHHHhcChh---hhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccc
Q 005556           68 HLELYRMIQMNDWQSVDGFVQSNTD---ILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSC  144 (691)
Q Consensus        68 ~~~L~~Aa~~G~~~~v~~ll~~~~~---~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~  144 (691)
                      ......|+..||...|++.++....   .++..  |.-|+++||+      |..+-  +.|+++.|+++.       +..
T Consensus        26 e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~--d~lGr~al~i------ai~ne--nle~~eLLl~~~-------~~~   88 (822)
T KOG3609|consen   26 EKGFLLAHENGDVPLVAKALEYKAVSKLNINCR--DPLGRLALHI------AIDNE--NLELQELLLDTS-------SEE   88 (822)
T ss_pred             hHHHHHHHHcCChHHHHHHHHhccccccchhcc--ChHhhhceec------ccccc--cHHHHHHHhcCc-------ccc
Confidence            3457889999999999999987543   23444  8889999999      99999  999999999985       222


Q ss_pred             cCCCCChHHHHHHHcCCHHHHHHHHHcCchh---------hhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCCCCc
Q 005556          145 KDGGGNTVLSLCAIRGNLKASKILVKHKHEL---------LIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRV  210 (691)
Q Consensus       145 ~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l---------~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~  210 (691)
                           ..+|-+|++.|.+++|+.++.+....         . ...-. +.|||.+||..++.|+++.|+.++....
T Consensus        89 -----gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~-~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~  158 (822)
T KOG3609|consen   89 -----GDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDAN-SPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIP  158 (822)
T ss_pred             -----chHHHHHHHHHHHHHHHHHHhcccccchhccccccC-cccCCCCccHHHHHHHhcchHHHHHHHHcCCCCC
Confidence                 45777899999999999999873221         1 12233 8899999999999999999999987754

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=97.74  E-value=2.8e-05  Score=88.06  Aligned_cols=128  Identities=16%  Similarity=0.047  Sum_probs=102.3

Q ss_pred             CCCCCcchhhhcccccchhccCCCCHHHHHHHHhc-cCCCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhh
Q 005556           99 FLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQS-TDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLI  177 (691)
Q Consensus        99 ~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~-~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~  177 (691)
                      ....|.|.||+      ++..|  +...++.+++. +   ..  -...|.+|.-.+|+ |..++.+.+-+++.....-+ 
T Consensus       570 ~~~r~~lllhL------~a~~l--yawLie~~~e~~~---~~--~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai-  634 (975)
T KOG0520|consen  570 VNFRDMLLLHL------LAELL--YAWLIEKVIEWAG---SG--DLELDRDGQGVIHF-CAALGYEWAFLPISADGVAI-  634 (975)
T ss_pred             CCCcchHHHHH------HHHHh--HHHHHHHHhcccc---cC--chhhcccCCChhhH-hhhcCCceeEEEEeeccccc-
Confidence            36678999999      99999  99999999986 3   22  23467778888888 66778888888877666555 


Q ss_pred             cCCCC-CCcHHHHHHHcCChHHHHHHHhcCCCCccc---cccCCCCCcHHHHHHHcCcHHHHHHHHHh
Q 005556          178 KQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVEN---FYCGGDGGRLLSDLIKANLYDVALNLLKN  241 (691)
Q Consensus       178 ~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~---~~~~~~G~t~Lh~Ai~~g~~~iv~~Ll~~  241 (691)
                      +.++. |+||||+|+.+|+..++..|++.++.....   .-....|.|+-..|-.+|+..+.-+|-+.
T Consensus       635 ~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~  702 (975)
T KOG0520|consen  635 DIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK  702 (975)
T ss_pred             ccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence            78999 999999999999999999999887654432   12456799999999999999888888765

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]

Probab=97.69  E-value=6.1e-05  Score=75.43  Aligned_cols=69  Identities=26%  Similarity=0.295  Sum_probs=51.0

Q ss_pred             ChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCCCCccccccCCCCCcHH
Q 005556          150 NTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLL  223 (691)
Q Consensus       150 ~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~L  223 (691)
                      .--|..||+.|..+.|++|++.+-+++  ..+. ..+||.+|+..||.++|++|+++|+.-..   ...+|.-.+
T Consensus        37 f~elceacR~GD~d~v~~LVetgvnVN--~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~r---dtf~G~RC~  106 (516)
T KOG0511|consen   37 FGELCEACRAGDVDRVRYLVETGVNVN--AVDRFDSSPLYLASLCGHEDVVKLLLENGAICSR---DTFDGDRCH  106 (516)
T ss_pred             hHHHHHHhhcccHHHHHHHHHhCCCcc--hhhcccccHHHHHHHcCcHHHHHHHHHcCCcccc---cccCcchhh
Confidence            455788888888888888888776665  7777 88888888888888888888888865322   234454444

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]

Probab=97.67  E-value=0.00011  Score=77.36  Aligned_cols=91  Identities=19%  Similarity=0.219  Sum_probs=76.0

Q ss_pred             HHHHHHHHcCCHHHHHHHHhcChh-hhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCC
Q 005556           69 LELYRMIQMNDWQSVDGFVQSNTD-ILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDG  147 (691)
Q Consensus        69 ~~L~~Aa~~G~~~~v~~ll~~~~~-~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~  147 (691)
                      ..|..|+...|...+..||..+.. .++..-.+.+|+|+||+      ||+.|  +..+.++|+=++   . | +..+|.
T Consensus       626 qqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHL------a~~~g--nVvl~QLLiWyg---~-d-v~~rda  692 (749)
T KOG0705|consen  626 QQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHL------AARKG--NVVLAQLLIWYG---V-D-VMARDA  692 (749)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhh------hhhhc--chhHHHHHHHhC---c-c-ceeccc
Confidence            458899999999999988887432 22222136678999999      99999  999999999776   3 3 788999


Q ss_pred             CCChHHHHHHHcCCHHHHHHHHHcC
Q 005556          148 GGNTVLSLCAIRGNLKASKILVKHK  172 (691)
Q Consensus       148 ~G~TpLh~Aa~~G~~~ivk~Ll~~~  172 (691)
                      .|+|+|.||-+.|..+++..|+..+
T Consensus       693 ~g~t~l~yar~a~sqec~d~llq~g  717 (749)
T KOG0705|consen  693 HGRTALFYARQAGSQECIDVLLQYG  717 (749)
T ss_pred             CCchhhhhHhhcccHHHHHHHHHcC
Confidence            9999999999999999999999985

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]

Probab=97.63  E-value=0.00013  Score=66.45  Aligned_cols=66  Identities=21%  Similarity=0.221  Sum_probs=51.6

Q ss_pred             ccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCCC
Q 005556          142 LSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPG  208 (691)
Q Consensus       142 l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~  208 (691)
                      ++.+|..|+|||+.||..|+.+.|.+|+.++...+ .+.+. |.+++.+|=+.|+.++|..|.+...+
T Consensus         5 in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~v-gv~d~ssldaaqlaek~g~~~fvh~lfe~~~e   71 (223)
T KOG2384|consen    5 INARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFV-GVTDESSLDAAQLAEKGGAQAFVHSLFENDRE   71 (223)
T ss_pred             ccchhhhcchHHHHHhhhcchhHHHHHhccCcccc-cccccccchHHHHHHhcChHHHHHHHHHHhcc
Confidence            67788888888888888888888888888875555 67777 88888888888888888887776443

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]

Probab=97.62  E-value=3.9e-05  Score=87.66  Aligned_cols=81  Identities=14%  Similarity=-0.002  Sum_probs=76.2

Q ss_pred             cCCChHHHHHHHcCcHHHHHHHHHHCCccccccccCCCcHHHHHHhcCChhHHHHHhcCCCcccccccccCCCCchhhhh
Q 005556          368 NKLKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHLT  447 (691)
Q Consensus       368 ~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~D~~G~TpLHlA  447 (691)
                      ..|.|+||.|+..|..-+++.|++.+.+ ++.+|..|+||||.+...|+...+..+++++   ++.++.|.+|++||++|
T Consensus       654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~-vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~---a~~~a~~~~~~~~l~~a  729 (785)
T KOG0521|consen  654 CIGCSLLHVAVGTGDSGAVELLLQNGAD-VNALDSKGRTPLHHATASGHTSIACLLLKRG---ADPNAFDPDGKLPLDIA  729 (785)
T ss_pred             hcccchhhhhhccchHHHHHHHHhcCCc-chhhhccCCCcchhhhhhcccchhhhhcccc---ccccccCccCcchhhHH
Confidence            5689999999999999999999999988 7899999999999999999999999999998   99999999999999999


Q ss_pred             hccCC
Q 005556          448 GKSEP  452 (691)
Q Consensus       448 a~~g~  452 (691)
                      ....+
T Consensus       730 ~~~~~  734 (785)
T KOG0521|consen  730 MEAAN  734 (785)
T ss_pred             hhhcc
Confidence            87744

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]

Probab=97.43  E-value=0.00023  Score=64.91  Aligned_cols=81  Identities=10%  Similarity=0.054  Sum_probs=68.3

Q ss_pred             hhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHcCc
Q 005556           94 LKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKH  173 (691)
Q Consensus        94 ~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~  173 (691)
                      ++.+  |..|+|||+.      |+..|  +.+.|.+|+.+|   ... +...|..|.+++.+|=+.|+.++|+.|-+...
T Consensus         5 in~r--D~fgWTalmc------aa~eg--~~eavsyllgrg---~a~-vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~   70 (223)
T KOG2384|consen    5 INAR--DAFGWTALMC------AAMEG--SNEAVSYLLGRG---VAF-VGVTDESSLDAAQLAEKGGAQAFVHSLFENDR   70 (223)
T ss_pred             ccch--hhhcchHHHH------Hhhhc--chhHHHHHhccC---ccc-ccccccccchHHHHHHhcChHHHHHHHHHHhc
Confidence            4555  8999999999      99999  999999999998   666 88899999999999999999999999999866


Q ss_pred             hhhhcCCCC--CCcHHHH
Q 005556          174 ELLIKQTNQ--NSLPVHL  189 (691)
Q Consensus       174 ~l~~~~~n~--G~TpLh~  189 (691)
                      +-. ...|.  ++++.++
T Consensus        71 ets-~p~nss~~e~lfyC   87 (223)
T KOG2384|consen   71 ETS-HPMNSSRDEALFYC   87 (223)
T ss_pred             cCC-CcccCCCCCccchh
Confidence            655 44444  5555543

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=97.34  E-value=0.00017  Score=81.99  Aligned_cols=128  Identities=17%  Similarity=0.112  Sum_probs=96.5

Q ss_pred             hhhhccHHHHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccc
Q 005556           63 EKYRRHLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETL  142 (691)
Q Consensus        63 ~~~~~~~~L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l  142 (691)
                      ...++.+-||.++..|..-.+..+++........  .|.+|.-.+|.      ++..   +.+..-+|+...   ... +
T Consensus       570 ~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~e--ld~d~qgV~hf------ca~l---g~ewA~ll~~~~---~~a-i  634 (975)
T KOG0520|consen  570 VNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLE--LDRDGQGVIHF------CAAL---GYEWAFLPISAD---GVA-I  634 (975)
T ss_pred             CCCcchHHHHHHHHHhHHHHHHHHhcccccCchh--hcccCCChhhH------hhhc---CCceeEEEEeec---ccc-c
Confidence            3455788999999999999999999851111112  48888899998      5554   456555555443   334 8


Q ss_pred             cccCCCCChHHHHHHHcCCHHHHHHHHHcCchhh--h--cCCCC-CCcHHHHHHHcCChHHHHHHHhc
Q 005556          143 SCKDGGGNTVLSLCAIRGNLKASKILVKHKHELL--I--KQTNQ-NSLPVHLAALFGHKDTFEYLLEE  205 (691)
Q Consensus       143 ~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~--~--~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~  205 (691)
                      +.+|..|+||||+|+..|+..++..|++.+++..  .  ..... |.|+-..|...|+..+.-+|-+.
T Consensus       635 ~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~  702 (975)
T KOG0520|consen  635 DIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK  702 (975)
T ss_pred             ccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence            9999999999999999999999999997754322  0  12233 89999999999999999888766

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]

Probab=97.24  E-value=0.00026  Score=81.00  Aligned_cols=90  Identities=21%  Similarity=0.208  Sum_probs=69.4

Q ss_pred             CCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCCCCccccccCCCCCcHHH
Q 005556          146 DGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLS  224 (691)
Q Consensus       146 d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh  224 (691)
                      -..|.|+||.|+..|..-++++|++.+.+++  ..+. |.||||.+...|+...+..|++++++...   .+.+|.++|+
T Consensus       653 ~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn--~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a---~~~~~~~~l~  727 (785)
T KOG0521|consen  653 LCIGCSLLHVAVGTGDSGAVELLLQNGADVN--ALDSKGRTPLHHATASGHTSIACLLLKRGADPNA---FDPDGKLPLD  727 (785)
T ss_pred             hhcccchhhhhhccchHHHHHHHHhcCCcch--hhhccCCCcchhhhhhcccchhhhhccccccccc---cCccCcchhh
Confidence            3467888888888888888888888888754  7777 88888888888888888888888777544   6888888888


Q ss_pred             HHHHcCcHHHHHHHHH
Q 005556          225 DLIKANLYDVALNLLK  240 (691)
Q Consensus       225 ~Ai~~g~~~iv~~Ll~  240 (691)
                      +|....+.|++.++.-
T Consensus       728 ~a~~~~~~d~~~l~~l  743 (785)
T KOG0521|consen  728 IAMEAANADIVLLLRL  743 (785)
T ss_pred             HHhhhccccHHHHHhh
Confidence            8876666565555443

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]

Probab=97.09  E-value=0.00084  Score=67.52  Aligned_cols=67  Identities=13%  Similarity=0.120  Sum_probs=55.4

Q ss_pred             cchhccCCCCHHHHHHHHhccCCCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHcCchhhhcCCCC--CCcHHHHH
Q 005556          114 LVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ--NSLPVHLA  190 (691)
Q Consensus       114 ~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~--G~TpLh~A  190 (691)
                      +.||+.|  +.+.|+.|++.|   .+  +|..|...+.||.+|+-.||.++||+|+++|+- .  .++.  |.-.++-|
T Consensus        41 ceacR~G--D~d~v~~LVetg---vn--VN~vD~fD~spL~lAsLcGHe~vvklLLenGAi-C--~rdtf~G~RC~Yga  109 (516)
T KOG0511|consen   41 CEACRAG--DVDRVRYLVETG---VN--VNAVDRFDSSPLYLASLCGHEDVVKLLLENGAI-C--SRDTFDGDRCHYGA  109 (516)
T ss_pred             HHHhhcc--cHHHHHHHHHhC---CC--cchhhcccccHHHHHHHcCcHHHHHHHHHcCCc-c--cccccCcchhhhhh
Confidence            3399999  999999999987   44  889999999999999999999999999998873 2  3444  76654433

>smart00248 ANK ankyrin repeats

Probab=95.98  E-value=0.0092  Score=36.55  Aligned_cols=25  Identities=40%  Similarity=0.555  Sum_probs=16.2

Q ss_pred             CChHHHHHHHcCCHHHHHHHHHcCc
Q 005556          149 GNTVLSLCAIRGNLKASKILVKHKH  173 (691)
Q Consensus       149 G~TpLh~Aa~~G~~~ivk~Ll~~~~  173 (691)
                      |.||||+|+..|+.+++++|++.+.
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~   26 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGA   26 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            5666666666666666666666554

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>smart00248 ANK ankyrin repeats

Probab=95.10  E-value=0.035  Score=33.79  Aligned_cols=26  Identities=31%  Similarity=0.489  Sum_probs=19.3

Q ss_pred             CCcHHHHHHHcCChHHHHHHHhcCCC
Q 005556          183 NSLPVHLAALFGHKDTFEYLLEETPG  208 (691)
Q Consensus       183 G~TpLh~Aa~~g~~~iv~~Ll~~~~~  208 (691)
                      |.||+|+|+..|+.++++.|++.+.+
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~~   27 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGAD   27 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            56778888888888888877776553

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]

Probab=94.39  E-value=0.049  Score=57.31  Aligned_cols=42  Identities=29%  Similarity=0.264  Sum_probs=28.4

Q ss_pred             CCcHHHHHHHcCChHHHHHHHhcCCCCccccccCCCCCcHHHHHH
Q 005556          183 NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLI  227 (691)
Q Consensus       183 G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~Ai  227 (691)
                      -.||||+|+..|..++|.+||+.+++...   .|..|+||..++.
T Consensus       430 tsT~LH~aa~qg~~k~v~~~Leeg~Dp~~---kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  430 TSTFLHYAAAQGARKCVKYFLEEGCDPST---KDGAGRTPYSLSA  471 (591)
T ss_pred             cchHHHHHHhcchHHHHHHHHHhcCCchh---cccCCCCcccccc
Confidence            56777777777777777777777765433   6777777776665

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]

Probab=94.19  E-value=0.054  Score=57.01  Aligned_cols=63  Identities=11%  Similarity=0.083  Sum_probs=50.7

Q ss_pred             HHHHHHHHHHCCccc-----cccccCCCcHHHHHHhcCChhHHHHHhcCCCcccccccccCCCCchhhhhh
Q 005556          383 PEFVNEFIMAYNYSA-----LLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHLTG  448 (691)
Q Consensus       383 ~eiv~~LL~~~~~~~-----~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~D~~G~TpLHlAa  448 (691)
                      .+.+++|.++..+..     ...|..--|+||+|+.+|..++|.+||+.|   +|+..+|..|.||..+++
T Consensus       404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg---~Dp~~kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEG---CDPSTKDGAGRTPYSLSA  471 (591)
T ss_pred             hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhc---CCchhcccCCCCcccccc
Confidence            456666666654431     223445679999999999999999999998   999999999999999988

>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses

Probab=92.12  E-value=1.7  Score=40.23  Aligned_cols=46  Identities=20%  Similarity=0.119  Sum_probs=39.2

Q ss_pred             HHHHHHHcCcHHHHHHHHHHCCccccccccCCCcHHHHHHhcCChhHHHHHhc
Q 005556          373 ALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHG  425 (691)
Q Consensus       373 pLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~  425 (691)
                      -|..|+..|-..+|.+.++.+++..       .++|-.|+.++|.+|+.+++.
T Consensus       146 hl~~a~~kgll~F~letlkygg~~~-------~~vls~Av~ynhRkIL~yfi~  191 (192)
T PF03158_consen  146 HLEKAAAKGLLPFVLETLKYGGNVD-------IIVLSQAVKYNHRKILDYFIR  191 (192)
T ss_pred             HHHHHHHCCCHHHHHHHHHcCCccc-------HHHHHHHHHhhHHHHHHHhhc
Confidence            4678999999999999999887632       289999999999999998875

These proteins may be involved in promoting survival of infected macrophages [].

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=91.12  E-value=1.2  Score=42.37  Aligned_cols=118  Identities=10%  Similarity=0.134  Sum_probs=65.6

Q ss_pred             HHHHHHHHcCCHHHHHHHHhcChhhhhcccCCCCCcchhhhcccccchhccCCCCHHHHHHHHhccCCCCCccccccCCC
Q 005556           69 LELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGG  148 (691)
Q Consensus        69 ~~L~~Aa~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~  148 (691)
                      -.|-.|+..-+.+.+..++....+.          .++|-+      |...+  ..+++.+|+..-.-...++..+..  
T Consensus       155 isledAV~AsN~~~i~~~VtdKkdA----------~~Am~~------si~~~--K~dva~~lls~f~ft~~dv~~~~~--  214 (284)
T PF06128_consen  155 ISLEDAVKASNYEEISNLVTDKKDA----------HQAMWL------SIGNA--KEDVALYLLSKFNFTKQDVASMEK--  214 (284)
T ss_pred             ccHHHHHhhcCHHHHHHHhcchHHH----------HHHHHH------Hhccc--HHHHHHHHHhhcceecchhhhcCc--
Confidence            4577788888888777776543332          467777      88888  888888888765111122111111  


Q ss_pred             CChHHHHHH--HcCCHHHHHHHHHcCc---hhhhcCCCC-CCcHHHHHHHcCChHHHHHHHhcCC
Q 005556          149 GNTVLSLCA--IRGNLKASKILVKHKH---ELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETP  207 (691)
Q Consensus       149 G~TpLh~Aa--~~G~~~ivk~Ll~~~~---~l~~~~~n~-G~TpLh~Aa~~g~~~iv~~Ll~~~~  207 (691)
                      +.--+-++-  -..+..+.+++++++-   +-. -.+-+ |+|-|--|..+++.+|+..|+++|+
T Consensus       215 ~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~-F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA  278 (284)
T PF06128_consen  215 ELYDIEYLLSEHSASYKVLEYFINRGLVDVNKK-FQKVNSGDTMLDNAMKYKNSEMIAFLLKYGA  278 (284)
T ss_pred             chhhHHHHHhhcCCcHHHHHHHHhccccccchh-hhccCCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence            111233322  2234556666666542   111 12223 6666666666666666666666665

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=90.60  E-value=1.1  Score=42.61  Aligned_cols=113  Identities=13%  Similarity=0.145  Sum_probs=77.5

Q ss_pred             hhccCCCCHHHHHHHHhccCCCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHcCc----hhhhcCCCCCCcHHHHHH
Q 005556          116 DVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKH----ELLIKQTNQNSLPVHLAA  191 (691)
Q Consensus       116 Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~----~l~~~~~n~G~TpLh~Aa  191 (691)
                      |+..-  +.+-+..++...            .+-.+++-+|...+..+++-+|+.+..    ++. ..... .--+-++.
T Consensus       160 AV~As--N~~~i~~~VtdK------------kdA~~Am~~si~~~K~dva~~lls~f~ft~~dv~-~~~~~-~ydieY~L  223 (284)
T PF06128_consen  160 AVKAS--NYEEISNLVTDK------------KDAHQAMWLSIGNAKEDVALYLLSKFNFTKQDVA-SMEKE-LYDIEYLL  223 (284)
T ss_pred             HHhhc--CHHHHHHHhcch------------HHHHHHHHHHhcccHHHHHHHHHhhcceecchhh-hcCcc-hhhHHHHH
Confidence            66666  666665555432            123589999999999999999998742    222 12111 11233332


Q ss_pred             --HcCChHHHHHHHhcCCCCccc-cccCCCCCcHHHHHHHcCcHHHHHHHHHhCCC
Q 005556          192 --LFGHKDTFEYLLEETPGRVEN-FYCGGDGGRLLSDLIKANLYDVALNLLKNHPE  244 (691)
Q Consensus       192 --~~g~~~iv~~Ll~~~~~~~~~-~~~~~~G~t~Lh~Ai~~g~~~iv~~Ll~~~~~  244 (691)
                        -..+..++++++++|-..... -.+-+.|.|-|.-|+..++.+++..||+.|+-
T Consensus       224 S~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~  279 (284)
T PF06128_consen  224 SEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAI  279 (284)
T ss_pred             hhcCCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence              234578899999998543322 23677899999999999999999999999863

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues

Probab=82.48  E-value=23  Score=34.24  Aligned_cols=15  Identities=33%  Similarity=0.494  Sum_probs=11.0

Q ss_pred             hcCCCchhhhhHHHHH
Q 005556          487 KLEQTPTEVFTKEHKE  502 (691)
Q Consensus       487 ~~G~Tp~di~~~~~~~  502 (691)
                      ++|+|+.|+|- ..++
T Consensus        43 k~G~tA~~lfG-~P~~   57 (206)
T PF06570_consen   43 KKGKTARQLFG-DPKE   57 (206)
T ss_pred             hCCCcHHHHcC-CHHH
Confidence            46999999987 4433

However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=81.54  E-value=3.3  Score=32.84  Aligned_cols=47  Identities=19%  Similarity=0.294  Sum_probs=27.5

Q ss_pred             hHHHHHHHcCCHHHHHHHHHcCchhhhcCCCCCCcHHHHHHHcCChHHHHHHHhc
Q 005556          151 TVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLEE  205 (691)
Q Consensus       151 TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~G~TpLh~Aa~~g~~~iv~~Ll~~  205 (691)
                      .-+..|+..|+.|+++.+++.+..        ....+..|+..-+-+++++|++.
T Consensus         8 ~tl~~Ai~GGN~eII~~c~~~~~~--------~~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    8 KTLEYAIIGGNFEIINICLKKNKP--------DNDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHhcc--------HHHHHHHHHHHhhHHHHHHHHHh
Confidence            445666666666666666653211        12346666666666666666665

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=80.94  E-value=2.9  Score=33.14  Aligned_cols=50  Identities=18%  Similarity=0.170  Sum_probs=41.8

Q ss_pred             CCcHHHHHHHcCChHHHHHHHhcCCCCccccccCCCCCcHHHHHHHcCcHHHHHHHHHhC
Q 005556          183 NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNH  242 (691)
Q Consensus       183 G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~Ai~~g~~~iv~~Ll~~~  242 (691)
                      ...-+..|+..|+.|+++.+++....       +   ...+..|+...+.|++++|++..
T Consensus         6 t~~tl~~Ai~GGN~eII~~c~~~~~~-------~---~~~l~~AI~~H~n~i~~~l~~~y   55 (76)
T PF11929_consen    6 TKKTLEYAIIGGNFEIINICLKKNKP-------D---NDCLEYAIKSHNNEIADWLIENY   55 (76)
T ss_pred             CHHHHHHHHhCCCHHHHHHHHHHhcc-------H---HHHHHHHHHHhhHHHHHHHHHhc
Confidence            34668999999999999999876422       1   45799999999999999999984

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	691
4f6r_D	169	Tubulin:stathmin-Like Domain Complex Length = 169		1e-04
2v4h_C	136	Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13		3e-04

>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex Length = 169

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 10/85 (11%)
Query: 120 DDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQ 179
           DDE   L   +A   DV+       +D  G T L L AI+G+L+  ++L+KH  ++    
Sbjct: 27  DDEVRIL---MANGADVN------AEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAAD 77
Query: 180 TNQNSLPVHLAALFGHKDTFEYLLE 204
              ++ P+HLAAL+GH +  E LL+
Sbjct: 78  KMGDT-PLHLAALYGHLEIVEVLLK 101

>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 120 DDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQ 179
           DDE   L   +A   DV+        D  GNT L L A   +L+  ++L+KH  ++    
Sbjct: 27  DDEVRIL---MANGADVN------ANDRKGNTPLHLAADYDHLEIVEVLLKHGADV-NAH 76
Query: 180 TNQNSLPVHLAALFGHKDTFEYLLE 204
            N  S P+HLAALFGH +  E LL+
Sbjct: 77  DNDGSTPLHLAALFGHLEIVEVLLK 101

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	691
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	1e-06
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	4e-05
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	9e-05
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	1e-04
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-04
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	8e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
3jxi_A	260	Vanilloid receptor-related osmotically activated p	3e-06
3jxi_A	260	Vanilloid receptor-related osmotically activated p	5e-04
2etb_A	256	Transient receptor potential cation channel subfam	3e-06
2etb_A	256	Transient receptor potential cation channel subfam	7e-04
2pnn_A	273	Transient receptor potential cation channel subfa	4e-06
2pnn_A	273	Transient receptor potential cation channel subfa	1e-04
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	7e-06
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	1e-05
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-05
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	9e-05
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-04
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-04
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-04
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-04
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	3e-04
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	3e-04
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	4e-04
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	4e-04
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	8e-04
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	2e-05
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	6e-04
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	3e-05
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	4e-05
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	5e-04
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	4e-05
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	3e-04
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	5e-04
3v30_A	172	DNA-binding protein rfxank; structural genomics co	4e-05
3v30_A	172	DNA-binding protein rfxank; structural genomics co	5e-04
3v30_A	172	DNA-binding protein rfxank; structural genomics co	6e-04
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	4e-05
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	4e-04
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	5e-04
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	4e-05
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	6e-04
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	5e-05
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	4e-04
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	5e-04
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	5e-04
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	7e-04
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	6e-05
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	2e-04
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	4e-04
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	5e-04
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	6e-05
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-04
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	4e-04
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	7e-04
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	6e-05
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	8e-04
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	8e-05
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	1e-04
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	3e-04
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	8e-04
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	9e-05
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	5e-04
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	9e-05
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-04
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	6e-04
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	1e-04
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	6e-04
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	1e-04
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	3e-04
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-04
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	4e-04
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	6e-04
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-04
3hra_A	201	Ankyrin repeat family protein; structural protein;	4e-04
3hra_A	201	Ankyrin repeat family protein; structural protein;	4e-04
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	2e-04
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	5e-04
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	6e-04
2rfa_A	232	Transient receptor potential cation channel subfa	2e-04
2rfa_A	232	Transient receptor potential cation channel subfa	4e-04
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	2e-04
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	2e-04
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	3e-04
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	3e-04
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	7e-04
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	4e-04
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	5e-04
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	6e-04
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	4e-04
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	9e-04
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	4e-04
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	5e-04
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	6e-04
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	6e-04
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	8e-04
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	9e-04

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 50.3 bits (121), Expect = 1e-06
 Identities = 14/123 (11%), Positives = 48/123 (39%), Gaps = 10/123 (8%)

Query: 126 LIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSL 185
           ++D +   + + +       +  GN+ L    +      +   V+   ++ ++  N++++
Sbjct: 192 MMDTVPSKSSLRLDY----ANKQGNSHLHWAILINWEDVAMRFVEMGIDVNME-DNEHTV 246

Query: 186 PVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNL--LKNHP 243
           P++L+         + LL++T   +       +G    + L    ++   +      +  
Sbjct: 247 PLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNG---TTVLPDRVVWLDFVPAAADPSKQ 303

Query: 244 EIV 246
           E++
Sbjct: 304 EVL 306

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 45.2 bits (108), Expect = 4e-05
 Identities = 12/72 (16%), Positives = 23/72 (31%), Gaps = 12/72 (16%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNS------------LPVHLAAL 192
           +D      L L      +  +K L++     LI+    ++              V  AA 
Sbjct: 240 EDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAAD 299

Query: 193 FGHKDTFEYLLE 204
              ++  + L E
Sbjct: 300 PSKQEVLQLLQE 311

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 44.1 bits (105), Expect = 9e-05
 Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 5/76 (6%)

Query: 129 KLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVH 188
            +     ++  +     D      + + A +G     + L++      I+        +H
Sbjct: 4   SMTDFPKLNRIK----SDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQ-NRFGCTALH 58

Query: 189 LAALFGHKDTFEYLLE 204
           LA  FG  DT +YL  
Sbjct: 59  LACKFGCVDTAKYLAS 74

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 43.7 bits (104), Expect = 1e-04
 Identities = 8/83 (9%), Positives = 18/83 (21%), Gaps = 5/83 (6%)

Query: 126 LIDKLAQSTDVDISE----TLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTN 181
           L+ K               T+          +   A     +  ++L +   E++    N
Sbjct: 263 LLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLDEVVRS-LN 321

Query: 182 QNSLPVHLAALFGHKDTFEYLLE 204
             +                  L 
Sbjct: 322 TGAGGAVKRKKKAAPAVKRMKLA 344

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 42.9 bits (102), Expect = 2e-04
 Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 7/62 (11%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIK--QTNQNSLPVHLAALFGHKDTFEYL 202
           ++  G T L L    G +  +K L        +   Q      P+HLA +    D    L
Sbjct: 49  QNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQK-----PIHLAVMANKTDLVVAL 103

Query: 203 LE 204
           +E
Sbjct: 104 VE 105

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 41.4 bits (98), Expect = 8e-04
 Identities = 18/109 (16%), Positives = 35/109 (32%), Gaps = 16/109 (14%)

Query: 110 IMGLLVDVETDDEATDLIDKLA---QSTDVDISETL-------SCKDGGGNTVLSLCAIR 159
           +  +   V+     T L            +++ + L       + KD    T L      
Sbjct: 126 VNEIGSHVKHCKGQTALH--WCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEF 183

Query: 160 GNLKASKILVKH---KHELLI-KQTNQNSLPVHLAALFGHKDTFEYLLE 204
            N +A  +++     K  L +     Q +  +H A L   +D     +E
Sbjct: 184 RNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVE 232

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 50.2 bits (119), Expect = 2e-06
 Identities = 86/566 (15%), Positives = 158/566 (27%), Gaps = 181/566 (31%)

Query: 6   EIKLNILASSIFVKGDLTLFWNIQEDDSMSLYGVQEIV-------YR---NKSKIEGGQS 55
           EI  +I+ S   V G L LFW +          VQ+ V       Y+   +  K E  Q 
Sbjct: 50  EID-HIIMSKDAVSGTLRLFWTLLSKQEE---MVQKFVEEVLRINYKFLMSPIKTEQRQP 105

Query: 56  SRDPQEHEKYRRHLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLV 115
           S   + + + R  L          +     F + N   L+ +  L ++L           
Sbjct: 106 SMMTRMYIEQRDRL----------YNDNQVFAKYNVSRLQPYLKLRQALL---------- 145

Query: 116 DVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVK----- 170
                        +L  + +V     +    G G T ++L        + K+  K     
Sbjct: 146 -------------ELRPAKNV----LIDGVLGSGKTWVALDVCL----SYKVQCKMDFKI 184

Query: 171 --------HKHELLIKQTNQNSLPVHL----AALFGHKDTFEYLLEETPGRVENFYCGGD 218
                   +  E +++      L   +     +   H    +  +               
Sbjct: 185 FWLNLKNCNSPETVLEM--LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAE--------- 233

Query: 219 GGRLLSDLIKANLYDVALNLLKN--HPEIVH--DIDSQ-------KMALDSL-ALKPYAF 266
               L  L+K+  Y+  L +L N  + +  +  ++  +       K   D L A      
Sbjct: 234 ----LRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHI 289

Query: 267 ESGSRLGCL-----EGFIYKCIPVTKQLSQTNDNPNVAGDTE----NGIGTTNGHSKKSI 317
                   L     +  + K +    Q     D P     T     + I      S +  
Sbjct: 290 SLDHHSMTLTPDEVKSLLLKYLDCRPQ-----DLPREVLTTNPRRLSIIAE----SIRDG 340

Query: 318 PYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTN--RANRNKLKGALF 375
                       A W  +K +  +KLT    +E       NV+     R   ++L  ++F
Sbjct: 341 L-----------ATWDNWKHVNCDKLT--TIIE----SSLNVLEPAEYRKMFDRL--SVF 381

Query: 376 ------TATRLGI-----PEFVNEFIMAYNYSALLLNSQN-------HGIF--------E 409
                     L +      +     ++   +   L+  Q          I+         
Sbjct: 382 PPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLEN 441

Query: 410 LAVLHRR--EKVFNLIHGVNSSYFSISLEDKSGNNILHLTGKSEPSRHVPGAALKMQREL 467
              LHR   +  +N+    +S        D          G      H+     +    +
Sbjct: 442 EYALHRSIVDH-YNIPKTFDSDDLIPPYLD---QYFYSHIG-----HHLKNI--EHPERM 490

Query: 468 QWFKLAKNLVHPQFREAENKLEQTPT 493
             F+    +V   FR  E K+    T
Sbjct: 491 TLFR----MVFLDFRFLEQKIRHDST 512

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 48.2 bits (115), Expect = 3e-06
 Identities = 19/94 (20%), Positives = 33/94 (35%), Gaps = 21/94 (22%)

Query: 126 LIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGN--LKASKILVKHKHELLIKQTNQN 183
           L +   +  D+        +D  GNTVL       +   + +K + K    LLIK     
Sbjct: 159 LTENGHKQADLRR------QDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLF 212

Query: 184 SL-------------PVHLAALFGHKDTFEYLLE 204
                          P+ +AA  G    F++++ 
Sbjct: 213 PDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIR 246

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 41.3 bits (97), Expect = 5e-04
 Identities = 18/99 (18%), Positives = 31/99 (31%), Gaps = 15/99 (15%)

Query: 121 DEATDLIDKLAQSTDVD--ISETLSCKDGGGNTVLSLCAIRGNLKASKILVKH------- 171
           D    L+D   ++ ++   I+         G T L +   R      ++LV+        
Sbjct: 63  DTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQ 122

Query: 172 ------KHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
                 + +          LP+ LAA         YL E
Sbjct: 123 ARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTE 161

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 48.2 bits (115), Expect = 3e-06
 Identities = 16/89 (17%), Positives = 34/89 (38%), Gaps = 11/89 (12%)

Query: 126 LIDKLAQSTDVDISET----------LSCKDGGGNTVLSLCAIRGNLKASKILVKHKHEL 175
           L++   Q   ++ +++          +   +   N+ L +    G L+    L       
Sbjct: 155 LLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLE 214

Query: 176 LIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
            I   +Q   P+ LAA  G  + F ++L+
Sbjct: 215 EIS-NHQGLTPLKLAAKEGKIEIFRHILQ 242

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 40.9 bits (96), Expect = 7e-04
 Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 14/93 (15%)

Query: 126 LIDKLAQSTDVD--ISETLSCKDGGGNTVLSLCAIRGNLKASKILVKH------------ 171
           L+     S +    ++   + +   G++ L +   + +L+  K+LV++            
Sbjct: 65  LLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRF 124

Query: 172 KHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
             +          LP+ LAA     D   YLLE
Sbjct: 125 FQKHQGTCFYFGELPLSLAACTKQWDVVTYLLE 157

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 48.2 bits (115), Expect = 4e-06
 Identities = 20/102 (19%), Positives = 32/102 (31%), Gaps = 26/102 (25%)

Query: 126 LIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKA--SKILVKHKHELLIK----- 178
           L+    Q  D+        +D  GNTVL       +     +K +    +E+LI      
Sbjct: 167 LLQNSWQPADISA------RDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLH 220

Query: 179 --------QTNQNSLPVHLAALFGHKDTFEYLLE-----ETP 207
                      +   P+ LAA  G      Y+L+        
Sbjct: 221 PTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPEC 262

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 17/94 (18%), Positives = 36/94 (38%), Gaps = 15/94 (15%)

Query: 126 LIDKLAQSTDVD--ISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHK-------HELL 176
           L+D   ++  +   ++ + +     G T L +   R N+    +LV++        +   
Sbjct: 76  LLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDF 135

Query: 177 IKQTNQNSL------PVHLAALFGHKDTFEYLLE 204
            K+T           P+ LAA        ++LL+
Sbjct: 136 FKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQ 169

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 46.8 bits (112), Expect = 7e-06
 Identities = 15/60 (25%), Positives = 26/60 (43%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
            D  G T L   A  G+ K  ++L +   +L  +        +H+AA +   +  E L+E
Sbjct: 73  VDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVE 132

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 45.2 bits (108), Expect = 1e-05
 Identities = 15/60 (25%), Positives = 26/60 (43%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
            D  G T L   A  G+ K  ++L +   +L  +        +H+AA +   +  E L+E
Sbjct: 72  VDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVE 131

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 46.7 bits (112), Expect = 2e-05
 Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 8/81 (9%)

Query: 131 AQSTDVDISETL-------SCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQN 183
           AQ    ++   L       +  +  G T L L A  G++  + +L+KH   +    T   
Sbjct: 253 AQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDAT-TRMG 311

Query: 184 SLPVHLAALFGHKDTFEYLLE 204
             P+H+A+ +G+    ++LL+
Sbjct: 312 YTPLHVASHYGNIKLVKFLLQ 332

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 44.4 bits (106), Expect = 9e-05
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 144 CKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLL 203
                G T L + +  GN+K  K L++H+ ++  K T     P+H AA  GH D    LL
Sbjct: 306 ATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAK-TKLGYSPLHQAAQQGHTDIVTLLL 364

Query: 204 E 204
           +
Sbjct: 365 K 365

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 44.4 bits (106), Expect = 1e-04
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
           K     T L   A  G+    K+L+++     +  T     P+H+AA  GH +T   LLE
Sbjct: 76  KAKDDQTPLHCAARIGHTNMVKLLLENNANPNLA-TTAGHTPLHIAAREGHVETVLALLE 134

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 44.0 bits (105), Expect = 1e-04
 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)

Query: 144 CKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLL 203
             +    T L + A  G+ + +K L+++K ++  K  +  + P+H AA  GH +  + LL
Sbjct: 42  VSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQT-PLHCAARIGHTNMVKLLL 100

Query: 204 E 204
           E
Sbjct: 101 E 101

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 43.3 bits (103), Expect = 2e-04
 Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 1/61 (1%)

Query: 144 CKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLL 203
           C    G T L + A  G ++ +++L++          N  + P+H+A    + D  + LL
Sbjct: 141 CMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLT-PLHVAVHHNNLDIVKLLL 199

Query: 204 E 204
            
Sbjct: 200 P 200

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 43.3 bits (103), Expect = 2e-04
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 1/61 (1%)

Query: 144 CKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLL 203
                G T L + +  G+L   K L++      +    +   P+H+AA  GH +  +YLL
Sbjct: 9   GGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVS-NVKVETPLHMAARAGHTEVAKYLL 67

Query: 204 E 204
           +
Sbjct: 68  Q 68

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 42.9 bits (102), Expect = 3e-04
 Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 10/79 (12%)

Query: 126 LIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSL 185
           L++  A   + ++          G+T L + A  G+++    L++ +       T +   
Sbjct: 99  LLENNA---NPNL------ATTAGHTPLHIAAREGHVETVLALLEKEASQACM-TKKGFT 148

Query: 186 PVHLAALFGHKDTFEYLLE 204
           P+H+AA +G     E LLE
Sbjct: 149 PLHVAAKYGKVRVAELLLE 167

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 42.9 bits (102), Expect = 3e-04
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
               G T L + A +  ++ ++ L+++       ++ Q   P+HLAA  GH +    LL 
Sbjct: 208 PAWNGYTPLHIAAKQNQVEVARSLLQYGGSA-NAESVQGVTPLHLAAQEGHAEMVALLLS 266

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 42.5 bits (101), Expect = 4e-04
 Identities = 14/61 (22%), Positives = 22/61 (36%), Gaps = 1/61 (1%)

Query: 144 CKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLL 203
                G T L +     NL   K+L+           N  + P+H+AA     +    LL
Sbjct: 174 AAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYT-PLHIAAKQNQVEVARSLL 232

Query: 204 E 204
           +
Sbjct: 233 Q 233

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 42.1 bits (100), Expect = 4e-04
 Identities = 15/79 (18%), Positives = 30/79 (37%), Gaps = 10/79 (12%)

Query: 126 LIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSL 185
           L+   A   DV+       K   G + L   A +G+     +L+K+        ++  + 
Sbjct: 330 LLQHQA---DVNA------KTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEV-SSDGTT 379

Query: 186 PVHLAALFGHKDTFEYLLE 204
           P+ +A   G+    + L  
Sbjct: 380 PLAIAKRLGYISVTDVLKV 398

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 41.3 bits (98), Expect = 8e-04
 Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 1/60 (1%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
           +   G T L L A  G+ +   +L+  +    +        P+HL A  GH    + L++
Sbjct: 241 ESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLG-NKSGLTPLHLVAQEGHVPVADVLIK 299

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 45.6 bits (109), Expect = 2e-05
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 5/65 (7%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKH----KHELLIKQTNQNSL-PVHLAALFGHKDTF 199
           +D  GNT L L   +G L +  +L +         ++K TN N    +HLA++ G+    
Sbjct: 74  RDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIV 133

Query: 200 EYLLE 204
           E L+ 
Sbjct: 134 ELLVS 138

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 41.0 bits (97), Expect = 6e-04
 Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 3/79 (3%)

Query: 126 LIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSL 185
           L           +   L   +  G+T L L +I G L   ++LV    ++  ++      
Sbjct: 97  LTQSCT---TPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRT 153

Query: 186 PVHLAALFGHKDTFEYLLE 204
            +HLA    + D    LL+
Sbjct: 154 ALHLAVDLQNPDLVSLLLK 172

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 43.2 bits (103), Expect = 3e-05
 Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
            +  G T+L + +I+G++ + + L+++  +  +K  +    P+H A   GH    E LL+
Sbjct: 6   TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVK-DHAGWTPLHEACNHGHLKVVELLLQ 64

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 45.2 bits (108), Expect = 4e-05
 Identities = 17/80 (21%), Positives = 24/80 (30%), Gaps = 9/80 (11%)

Query: 126 LIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSL 185
           L+       D          D  GNT L      GN++  K+ VK    L+         
Sbjct: 81  LLFSGL---DDSQ------FDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKT 131

Query: 186 PVHLAALFGHKDTFEYLLEE 205
             + A +        Y L E
Sbjct: 132 SFYHAVMLNDVSIVSYFLSE 151

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 41.7 bits (99), Expect = 5e-04
 Identities = 12/75 (16%), Positives = 19/75 (25%), Gaps = 9/75 (12%)

Query: 130 LAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHL 189
              S D          D  G++         N++    L+                P+H 
Sbjct: 18  FLSSKDTF------KADVHGHSASYYAIADNNVRLVCTLLNAGAL--KNLLENEF-PLHQ 68

Query: 190 AALFGHKDTFEYLLE 204
           AA        + LL 
Sbjct: 69  AATLEDTKIVKILLF 83

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 44.5 bits (106), Expect = 4e-05
 Identities = 9/60 (15%), Positives = 18/60 (30%), Gaps = 2/60 (3%)

Query: 146 DGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLEE 205
           +  G   L         K     + H     +K        +  ++L G  D  + ++ E
Sbjct: 2   EITGQVSLPPGKRTNLRKTGSERIAHGMR--VKFNPLPLALLLDSSLEGEFDLVQRIIYE 59

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 41.8 bits (99), Expect = 3e-04
 Identities = 12/62 (19%), Positives = 21/62 (33%), Gaps = 2/62 (3%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTN--QNSLPVHLAALFGHKDTFEYL 202
            D  G T L   A   N++  K LV+    +     +  Q +         G+    ++L
Sbjct: 99  ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 158

Query: 203 LE 204
             
Sbjct: 159 YG 160

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 41.1 bits (97), Expect = 5e-04
 Identities = 16/79 (20%), Positives = 30/79 (37%), Gaps = 10/79 (12%)

Query: 126 LIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSL 185
           +I ++      D S      +  G T L      G+ +  K LV+    +     +    
Sbjct: 56  IIYEVD-----DPSL----PNDEGITALHNAVCAGHTEIVKFLVQFGVNV-NAADSDGWT 105

Query: 186 PVHLAALFGHKDTFEYLLE 204
           P+H AA   +    ++L+E
Sbjct: 106 PLHCAASCNNVQVCKFLVE 124

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 43.6 bits (104), Expect = 4e-05
 Identities = 15/57 (26%), Positives = 26/57 (45%)

Query: 148 GGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
           G +  +   A +G L   K  ++    L+ K   +   P+  A+ FG  +T  +LLE
Sbjct: 1   GDSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLE 57

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 40.5 bits (96), Expect = 5e-04
 Identities = 17/80 (21%), Positives = 27/80 (33%), Gaps = 12/80 (15%)

Query: 126 LIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSL 185
           L++  A   D  I            + LSL +  G      +L++   +  I   + N  
Sbjct: 55  LLEWGA---DPHI------LAKERESALSLASTGGYTDIVGLLLERDVD--INIYDWNGG 103

Query: 186 -PVHLAALFGHKDTFEYLLE 204
            P+  A    H    E LL 
Sbjct: 104 TPLLYAVRGNHVKCVEALLA 123

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 40.1 bits (95), Expect = 6e-04
 Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 7/64 (10%)

Query: 144 CKDGGGNTVLSLCAIRGNLKASKILVKH---KHELLIKQTNQNSLPVHLAALFGHKDTFE 200
             D  G T L   +  G ++  + L++     H        +    + LA+  G+ D   
Sbjct: 31  KPDERGFTPLIWASAFGEIETVRFLLEWGADPHI----LAKERESALSLASTGGYTDIVG 86

Query: 201 YLLE 204
            LLE
Sbjct: 87  LLLE 90

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 44.3 bits (106), Expect = 4e-05
 Identities = 16/60 (26%), Positives = 28/60 (46%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
           KD  G+T L L A +G+ +  + L+ +    +  Q +    P+  A  + H D  + LL 
Sbjct: 73  KDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLS 132

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 41.2 bits (98), Expect = 4e-04
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
                 T L   A   +L+A K L+K    +  K   + S  +HLAA  GH +  +YLL 
Sbjct: 40  CSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPK-DAEGSTCLHLAAKKGHYEVVQYLLS 98

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 41.2 bits (98), Expect = 5e-04
 Identities = 11/69 (15%), Positives = 26/69 (37%), Gaps = 5/69 (7%)

Query: 136 VDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGH 195
           ++       +     + L   A  G++    +LV+    +    +     P+  AA   H
Sbjct: 2   MNFKM----EHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTC-SEDQRTPLMEAAENNH 56

Query: 196 KDTFEYLLE 204
            +  +YL++
Sbjct: 57  LEAVKYLIK 65

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 44.3 bits (106), Expect = 4e-05
 Identities = 14/60 (23%), Positives = 22/60 (36%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
            D    T+L   AI   +   K  +     +     + NS P+H A   GH      L++
Sbjct: 38  PDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMK 97

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 40.9 bits (97), Expect = 6e-04
 Identities = 10/63 (15%), Positives = 20/63 (31%), Gaps = 7/63 (11%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKH---KHELLIKQTNQNSLPVHLAALFGHKDTFEY 201
            D      +      G  +  + LV+      +       +N   +H AA+    D  +Y
Sbjct: 5   IDDYSTWDIVKATQYGIYERCRELVEAGYDVRQ----PDKENVTLLHWAAINNRIDLVKY 60

Query: 202 LLE 204
            + 
Sbjct: 61  YIS 63

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 44.9 bits (107), Expect = 5e-05
 Identities = 14/67 (20%), Positives = 25/67 (37%), Gaps = 7/67 (10%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQ-------TNQNSLPVHLAALFGHKD 197
                 TVL   A   + + S+ L+ H+ +  I             + P+ LA L   + 
Sbjct: 121 DPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRR 180

Query: 198 TFEYLLE 204
              YL++
Sbjct: 181 LVAYLMK 187

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 42.2 bits (100), Expect = 4e-04
 Identities = 10/60 (16%), Positives = 20/60 (33%), Gaps = 1/60 (1%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
           +D  G T + L A  G ++    L++    +       +     LA    H +  +    
Sbjct: 309 QDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAV-DATDHTARQLAQANNHHNIVDIFDR 367

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 41.9 bits (99), Expect = 5e-04
 Identities = 13/60 (21%), Positives = 19/60 (31%), Gaps = 1/60 (1%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
            D   NT L L  +    +    L+K   +  I         +H AA         Y+L 
Sbjct: 162 MDCDENTPLMLAVLARRRRLVAYLMKAGADPTIY-NKSERSALHQAAANRDFGMMVYMLN 220

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 41.9 bits (99), Expect = 5e-04
 Identities = 23/81 (28%), Positives = 31/81 (38%), Gaps = 5/81 (6%)

Query: 126 LIDKLAQSTDVDISETLSC--KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQN 183
           L++K A    VD         +   G T L   A   N+   K LV  K     KQ    
Sbjct: 257 LVEKGA---KVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDG 313

Query: 184 SLPVHLAALFGHKDTFEYLLE 204
             P+ LAA  G  +   YL++
Sbjct: 314 KTPIMLAAQEGRIEVVMYLIQ 334

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 41.5 bits (98), Expect = 7e-04
 Identities = 9/79 (11%), Positives = 21/79 (26%), Gaps = 7/79 (8%)

Query: 127 IDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLP 186
           +     +     +E     +      L      G+   ++ + +      I     N   
Sbjct: 76  LGDFNHTNLQIPTE----PEPESPIKLH-TEAAGSYAITEPITRESVN--IIDPRHNRTV 128

Query: 187 VHLAALFGHKDTFEYLLEE 205
           +H  A     +  E L+  
Sbjct: 129 LHWIASNSSAEKSEDLIVH 147

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 44.0 bits (105), Expect = 6e-05
 Identities = 11/63 (17%), Positives = 21/63 (33%), Gaps = 3/63 (4%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLI---KQTNQNSLPVHLAALFGHKDTFEY 201
            D  G T   L     +    + L+       +    +       +H+A     ++T + 
Sbjct: 75  LDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQL 134

Query: 202 LLE 204
           LLE
Sbjct: 135 LLE 137

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 42.4 bits (101), Expect = 2e-04
 Identities = 12/79 (15%), Positives = 28/79 (35%), Gaps = 5/79 (6%)

Query: 126 LIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSL 185
           L+D  A    +D+      ++  G T L +       +  ++L++   ++          
Sbjct: 98  LLDSAAPG-TLDLEA----RNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRS 152

Query: 186 PVHLAALFGHKDTFEYLLE 204
           P+  A         + LL+
Sbjct: 153 PLIHAVENNSLSMVQLLLQ 171

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 41.7 bits (99), Expect = 4e-04
 Identities = 17/70 (24%), Positives = 26/70 (37%), Gaps = 11/70 (15%)

Query: 142 LSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQ-------TNQNSLPVHLAALFG 194
            +  D  G+T L +  ++GNL A   LV     L  +         N    P+HLA +  
Sbjct: 2   ATRADEDGDTPLHIAVVQGNLPAVHRLV----NLFQQGGRELDIYNNLRQTPLHLAVITT 57

Query: 195 HKDTFEYLLE 204
                  L+ 
Sbjct: 58  LPSVVRLLVT 67

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 41.3 bits (98), Expect = 5e-04
 Identities = 12/61 (19%), Positives = 22/61 (36%), Gaps = 1/61 (1%)

Query: 144 CKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLL 203
            +   G++ L   + RG L   + LV+   +  +K    N  P+ +A      D      
Sbjct: 178 AQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLK-NCHNDTPLMVARSRRVIDILRGKA 236

Query: 204 E 204
            
Sbjct: 237 T 237

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 44.4 bits (106), Expect = 6e-05
 Identities = 17/107 (15%), Positives = 31/107 (28%), Gaps = 11/107 (10%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
            D  G   L   A  G L  ++ L+     +     ++   P+ +A     ++  +  + 
Sbjct: 102 PDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAV-NSEGDTPLDIAEEEAMEELLQNEVN 160

Query: 205 ETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIV-HDID 250
                      G D      +  +  L D    L   H   V H   
Sbjct: 161 RQ---------GVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKS 198

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 42.9 bits (102), Expect = 2e-04
 Identities = 10/61 (16%), Positives = 16/61 (26%), Gaps = 2/61 (3%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
            D        L    G+    +  V  + +   K    +      A   G  +    LLE
Sbjct: 4   ADAKQKRNEQLKRWIGSETDLEPPVVKRKK--TKVKFDDGAVFLAACSSGDTEEVLRLLE 61

Query: 205 E 205
            
Sbjct: 62  R 62

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 41.7 bits (99), Expect = 4e-04
 Identities = 21/101 (20%), Positives = 43/101 (42%), Gaps = 10/101 (9%)

Query: 109 LIMGLLVDVET--DDEATDL---IDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLK 163
            +    VD+E    +E   +     +   S  ++           G T L + A +G  +
Sbjct: 158 EVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVR----HAKSGGTALHVAAAKGYTE 213

Query: 164 ASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
             K+L++ ++++ IK       P+H AA +G ++    L+E
Sbjct: 214 VLKLLIQARYDVNIK-DYDGWTPLHAAAHWGKEEACRILVE 253

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 41.3 bits (98), Expect = 7e-04
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 7/63 (11%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKH---KHELLIKQTNQNSLPVHLAALFGHKDTFEY 201
            +  G T L    I  N+   K LV++    ++      N+  +P+H AA  G+ D  EY
Sbjct: 69  ANVDGLTALHQACIDDNVDMVKFLVENGANINQ----PDNEGWIPLHAAASCGYLDIAEY 124

Query: 202 LLE 204
           L+ 
Sbjct: 125 LIS 127

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 43.8 bits (104), Expect = 6e-05
 Identities = 18/93 (19%), Positives = 32/93 (34%), Gaps = 4/93 (4%)

Query: 115 VDVETDDEATDLIDKLAQSTDVDISETLSC--KDGGGNTVLSLCAIRGNLKASKILVKHK 172
           +   TD   T+   K        +  +     +    +  L   A RGNL   +  + ++
Sbjct: 38  IIYITDMSDTNWW-KGTSKGRTGLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNR 96

Query: 173 HELLIKQTNQNSLPVHLAALFGHKDTFEYLLEE 205
             +        S  ++ A   GHKD  E L  +
Sbjct: 97  VGVNGL-DKAGSTALYWACHGGHKDIVEMLFTQ 128

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 40.3 bits (95), Expect = 8e-04
 Identities = 20/103 (19%), Positives = 36/103 (34%), Gaps = 8/103 (7%)

Query: 109 LIMGLLVDVETDDEATDLIDKLAQSTDVDISETL-------SCKDGGGNTVLSLCAIRGN 161
           LI    V  + +     L +  A+  ++             +  D  G+T L      G+
Sbjct: 60  LIPSNYVAEQAESIDNPLHEA-AKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGH 118

Query: 162 LKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
               ++L    +  L +Q       +H AA  G+ D  + LL 
Sbjct: 119 KDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLA 161

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 44.1 bits (105), Expect = 8e-05
 Identities = 13/80 (16%), Positives = 30/80 (37%), Gaps = 4/80 (5%)

Query: 125 DLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNS 184
           +  +   +   + +      ++  G+T L +  I  + +  ++L     +L   +     
Sbjct: 138 NEEEPRDEDWRLQLEA----ENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGR 193

Query: 185 LPVHLAALFGHKDTFEYLLE 204
            P+HLA         E LL+
Sbjct: 194 TPLHLAVEAQAASVLELLLK 213

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 43.7 bits (104), Expect = 1e-04
 Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 7/79 (8%)

Query: 126 LIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSL 185
           L+   A    +D+      ++  G T L L AI G     + L      +L+ +   ++ 
Sbjct: 28  LLGFSAGHEYLDL------QNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHT- 80

Query: 186 PVHLAALFGHKDTFEYLLE 204
            +HLA           LL+
Sbjct: 81  ALHLACRVRAHTCACVLLQ 99

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 42.5 bits (101), Expect = 3e-04
 Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 2/62 (3%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKH--KHELLIKQTNQNSLPVHLAALFGHKDTFEYL 202
               G+T L L  I  +      L+     HE L  Q +     +HLAA+ G   T E L
Sbjct: 5   VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKL 64

Query: 203 LE 204
             
Sbjct: 65  YA 66

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 41.0 bits (97), Expect = 8e-04
 Identities = 11/60 (18%), Positives = 18/60 (30%), Gaps = 1/60 (1%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
           +  GG T L    +R N   +++L  H              P   +      D  +   E
Sbjct: 221 RMYGGRTPLGSALLRPNPILARLLRAHGAPEPED-GGDKLSPCSSSGSDSDSDNRDEGDE 279

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 42.4 bits (101), Expect = 9e-05
 Identities = 16/60 (26%), Positives = 27/60 (45%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
           +D  GN  L L A  G+L+  + LVKH    +  + ++      LA L+G  +    +  
Sbjct: 99  EDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQA 158

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 40.4 bits (96), Expect = 5e-04
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
           KD  G  V+   A  G L   + L++ + ++ I+  N+ +LP+HLAA  GH    E+L++
Sbjct: 66  KDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIE-DNEGNLPLHLAAKEGHLRVVEFLVK 124

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 43.6 bits (104), Expect = 9e-05
 Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
           ++    T L L A  G+ + +K+L+ H     I   + + LP  +A    H D    L E
Sbjct: 154 QNNREETPLFLAAREGSYETAKVLLDHFANRDIT-DHMDRLPRDIAQERMHHDIVRLLDE 212

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 42.4 bits (101), Expect = 2e-04
 Identities = 13/60 (21%), Positives = 25/60 (41%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
           +D  G T L            +IL++++   L  + +  + P+ LAA    +   E L+ 
Sbjct: 54  QDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLIN 113

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 40.9 bits (97), Expect = 6e-04
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 7/63 (11%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKH---KHELLIKQTNQNSLPVHLAALFGHKDTFEY 201
            D  G + L   A   N+ A+ +L+K+   K      Q N+   P+ LAA  G  +T + 
Sbjct: 121 VDDLGKSALHWAAAVNNVDAAVVLLKNGANKDM----QNNREETPLFLAAREGSYETAKV 176

Query: 202 LLE 204
           LL+
Sbjct: 177 LLD 179

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 42.0 bits (100), Expect = 1e-04
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
           +D  G + +   A  G L   K+LV+H  ++ +      +LP+HLA   GH     +L  
Sbjct: 64  QDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVP-DGTGALPIHLAVQEGHTAVVSFLAA 122

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 40.1 bits (95), Expect = 6e-04
 Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 8/64 (12%)

Query: 144 CKDGGGNTVLSLCAIRGNLKASKILVKH---KHELLIKQTNQNSLPVHLAALFGHKDTFE 200
             +  G T L +  + G+   +  L+K     +     Q    + PVH AA  G  DT +
Sbjct: 31  ALNRFGKTALQV-MMFGSTAIALELLKQGASPNV----QDTSGTSPVHDAARTGFLDTLK 85

Query: 201 YLLE 204
            L+E
Sbjct: 86  VLVE 89

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 42.8 bits (102), Expect = 1e-04
 Identities = 11/66 (16%), Positives = 22/66 (33%), Gaps = 2/66 (3%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSL--PVHLAALFGHKDTFEYL 202
           KD  G   L         + +  L+     + +     +S   P H+A   G+ +  + L
Sbjct: 32  KDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSL 91

Query: 203 LEETPG 208
            +    
Sbjct: 92  YDRPLK 97

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 42.0 bits (100), Expect = 3e-04
 Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 5/75 (6%)

Query: 130 LAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHL 189
             +    D+++        G T L L   +   + S+ L+++   + IK    N +P+H 
Sbjct: 92  YDRPLKPDLNK----ITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIK-DKFNQIPLHR 146

Query: 190 AALFGHKDTFEYLLE 204
           AA  G     E L  
Sbjct: 147 AASVGSLKLIELLCG 161

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 41.6 bits (99), Expect = 2e-04
 Identities = 12/59 (20%), Positives = 25/59 (42%), Gaps = 3/59 (5%)

Query: 147 GGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSL-PVHLAALFGHKDTFEYLLE 204
           G  +  +   A +G +      ++ ++   I  T++    P+  AA  G     E+LL+
Sbjct: 1   GANSLSVHQLAAQGEMLYLATRIEQENV--INHTDEEGFTPLMWAAAHGQIAVVEFLLQ 57

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 40.4 bits (96), Expect = 4e-04
 Identities = 17/80 (21%), Positives = 29/80 (36%), Gaps = 12/80 (15%)

Query: 126 LIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSL 185
           L+   A   D  +         G  + LSL   +G     K+L+    +  + + + N  
Sbjct: 55  LLQNGA---DPQL------LGKGRESALSLACSKGYTDIVKMLLDCGVD--VNEYDWNGG 103

Query: 186 -PVHLAALFGHKDTFEYLLE 204
            P+  A    H    + LLE
Sbjct: 104 TPLLYAVHGNHVKCVKMLLE 123

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 40.1 bits (95), Expect = 6e-04
 Identities = 13/63 (20%), Positives = 22/63 (34%), Gaps = 7/63 (11%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKH---KHELLIKQTNQNSLPVHLAALFGHKDTFEY 201
            D  G T L   A  G +   + L+++                  + LA   G+ D  + 
Sbjct: 32  TDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQL----LGKGRESALSLACSKGYTDIVKM 87

Query: 202 LLE 204
           LL+
Sbjct: 88  LLD 90

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 42.1 bits (100), Expect = 2e-04
 Identities = 11/60 (18%), Positives = 24/60 (40%), Gaps = 1/60 (1%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
           K      +L     R   K  +IL    +++    T  N+ P+++A      +  + L++
Sbjct: 2   KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNT-PLNIAVHNNDIEIAKALID 60

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 40.9 bits (97), Expect = 4e-04
 Identities = 13/60 (21%), Positives = 29/60 (48%), Gaps = 1/60 (1%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
            D  GNT L++     +++ +K L+    ++ ++ +  +S P   A   G  +   Y+L+
Sbjct: 35  VDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDS-PYLYAGAQGRTEILAYMLK 93

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 40.9 bits (97), Expect = 4e-04
 Identities = 13/60 (21%), Positives = 23/60 (38%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
           ++   ++       +G  +    ++KH    L K        +  AA  GH D  + LLE
Sbjct: 68  QNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLE 127

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 42.5 bits (101), Expect = 2e-04
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 7/63 (11%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKH---KHELLIKQTNQNSLPVHLAALFGHKDTFEY 201
            D  G + L   A   N+ A+ +L+K+   K      Q N+   P+ LAA  G  +T + 
Sbjct: 153 VDDLGKSALHWAAAVNNVDAAVVLLKNGANKDM----QNNREETPLFLAAREGSYETAKV 208

Query: 202 LLE 204
           LL+
Sbjct: 209 LLD 211

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 41.3 bits (98), Expect = 5e-04
 Identities = 13/60 (21%), Positives = 25/60 (41%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
           +D  G T L            +IL++++   L  + +  + P+ LAA    +   E L+ 
Sbjct: 86  QDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLIN 145

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 41.3 bits (98), Expect = 6e-04
 Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
           ++    T L L A  G+ + +K+L+ H     I   + + LP  +A    H D    L  
Sbjct: 186 QNNREETPLFLAAREGSYETAKVLLDHFANRDIT-DHMDRLPRDIAQERMHHDIVRLLDL 244

Query: 205 E 205
           E
Sbjct: 245 E 245

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 42.6 bits (101), Expect = 2e-04
 Identities = 14/64 (21%), Positives = 29/64 (45%), Gaps = 4/64 (6%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSL----PVHLAALFGHKDTFE 200
           +   G T L + A+  NL+A+ +L++   EL+ +            +H+A +  + +   
Sbjct: 33  RGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVR 92

Query: 201 YLLE 204
            LL 
Sbjct: 93  ALLA 96

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 41.4 bits (98), Expect = 4e-04
 Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 17/74 (22%)

Query: 144 CKDGGGNTVLSLCAIRGNLKASKILVKHKHELLI-------------KQTNQNSLPVHLA 190
            +D  GNTVL +  ++ N    K      + LL+                NQ   P  LA
Sbjct: 149 AQDSLGNTVLHILILQPN----KTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLA 204

Query: 191 ALFGHKDTFEYLLE 204
            + G+   F++L++
Sbjct: 205 GVEGNIVMFQHLMQ 218

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 39.6 bits (94), Expect = 2e-04
 Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
           KD  G T L L A  G+L+  K+L++   ++  K       P+HLAA  GH +  + LLE
Sbjct: 31  KDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAK-DKNGRTPLHLAARNGHLEVVKLLLE 89

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 40.9 bits (97), Expect = 2e-04
 Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 2/62 (3%)

Query: 144 CKDGGGNTV-LSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYL 202
           C D    T  +   A  G L    +L +    L ++      LPV LA   GH+D   YL
Sbjct: 72  CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVR-DAWGRLPVDLAEELGHRDVARYL 130

Query: 203 LE 204
             
Sbjct: 131 RA 132

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 42.5 bits (101), Expect = 3e-04
 Identities = 10/56 (17%), Positives = 21/56 (37%)

Query: 149 GNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
            N +L       ++   + L++    +  ++      P+H A     +D  E LL 
Sbjct: 5   DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLR 60

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 41.3 bits (98), Expect = 3e-04
 Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 1/61 (1%)

Query: 144 CKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLL 203
             + G +T L L A  G+    + L+++K ++        ++P+H A  +G     E L+
Sbjct: 67  VMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAV-NEHGNVPLHYACFWGQDQVAEDLV 125

Query: 204 E 204
            
Sbjct: 126 A 126

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 40.1 bits (95), Expect = 7e-04
 Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 3/62 (4%)

Query: 144 CKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSL-PVHLAALFGHKDTFEYL 202
             D  G + L      G     ++L+       I   N+    P+HLAA  GH+D  + L
Sbjct: 34  QGDDHGFSPLHWACREGRSAVVEMLIMRGAR--INVMNRGDDTPLHLAASHGHRDIVQKL 91

Query: 203 LE 204
           L+
Sbjct: 92  LQ 93

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 42.1 bits (100), Expect = 4e-04
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
            DG  +T L L A    ++  ++L++H  ++  K       P+H A  +GH +  E LL+
Sbjct: 54  SDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLV-PLHNACSYGHYEVTELLLK 112

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 41.7 bits (99), Expect = 5e-04
 Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 10/79 (12%)

Query: 126 LIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSL 185
           L+   A   DV        KD GG   L      G+ + +++L+KH   +          
Sbjct: 77  LLQHGA---DVHA------KDKGGLVPLHNACSYGHYEVTELLLKHGACV-NAMDLWQFT 126

Query: 186 PVHLAALFGHKDTFEYLLE 204
           P+H AA     +    LL 
Sbjct: 127 PLHEAASKNRVEVCSLLLS 145

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 41.7 bits (99), Expect = 6e-04
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
           K+    T L + A R +    ++L KH  ++     +     +H AAL GH  T   LL 
Sbjct: 243 KNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNAL-DSLGQTALHRAALAGHLQTCRLLLS 301

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 40.5 bits (96), Expect = 4e-04
 Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 3/61 (4%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSL-PVHLAALFGHKDTFEYLL 203
            +G  +T L   A    +   + L++H  +  +   ++  L P+H A  +GH +  E L+
Sbjct: 38  IEGRQSTPLHFAAGYNRVSVVEYLLQHGAD--VHAKDKGGLVPLHNACSYGHYEVAELLV 95

Query: 204 E 204
           +
Sbjct: 96  K 96

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 39.7 bits (94), Expect = 9e-04
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
           KD GG   L      G+ + +++LVKH   + +        P+H AA  G  +  + LL+
Sbjct: 71  KDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVA-DLWKFTPLHEAAAKGKYEICKLLLQ 129

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 41.7 bits (99), Expect = 4e-04
 Identities = 15/79 (18%), Positives = 30/79 (37%), Gaps = 11/79 (13%)

Query: 126 LIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSL 185
           L+   A    V+            +T L    + G+     +L++H     ++  +  + 
Sbjct: 111 LLKHGA---QVNG------VTADWHTPLFNACVSGSWDCVNLLLQHGAS--VQPESDLAS 159

Query: 186 PVHLAALFGHKDTFEYLLE 204
           P+H AA  GH +    L+ 
Sbjct: 160 PIHEAARRGHVECVNSLIA 178

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 39.6 bits (94), Expect = 5e-04
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 7/63 (11%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKH---KHELLIKQTNQNSLPVHLAALFGHKDTFEY 201
           KD  G T L L A  G+L+  K+L++     +     +      P+HLAA  GH +  + 
Sbjct: 64  KDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA----KDKNGRTPLHLAARNGHLEVVKL 119

Query: 202 LLE 204
           LLE
Sbjct: 120 LLE 122

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 39.3 bits (93), Expect = 6e-04
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 7/63 (11%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKH---KHELLIKQTNQNSLPVHLAALFGHKDTFEY 201
           KD  G T L L A  G+L+  K+L++     +     +      P+HLAA  GH +  + 
Sbjct: 31  KDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA----KDKNGRTPLHLAARNGHLEVVKL 86

Query: 202 LLE 204
           LLE
Sbjct: 87  LLE 89

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 40.5 bits (96), Expect = 6e-04
 Identities = 12/63 (19%), Positives = 21/63 (33%), Gaps = 7/63 (11%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKH---KHELLIKQTNQNSLPVHLAALFGHKDTFEY 201
           +D    T L +  + G   A   LV++     +    +  + S  +  A         E 
Sbjct: 31  RDSYNRTPLMVACMLGMENAIDKLVENFDKLED----KDIEGSTALIWAVKNNRLGIAEK 86

Query: 202 LLE 204
           LL 
Sbjct: 87  LLS 89

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 38.9 bits (92), Expect = 8e-04
 Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 7/63 (11%)

Query: 145 KDGGGNTVLSLCAIRGNLKASKILVKH---KHELLIKQTNQNSLPVHLAALFGHKDTFEY 201
           +   GNT L L A  G+ +  K+L+      +     ++   + P HLA   GH +  + 
Sbjct: 38  RSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNA----RSKDGNTPEHLAKKNGHHEIVKL 93

Query: 202 LLE 204
           L  
Sbjct: 94  LDA 96

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 41.1 bits (96), Expect = 9e-04
 Identities = 18/102 (17%), Positives = 29/102 (28%), Gaps = 2/102 (1%)

Query: 105 TIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKA 164
              H+ +    ++E   +   L           +      K      +  + AI G   A
Sbjct: 48  EAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSA 107

Query: 165 SKILVK--HKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLE 204
              L       E++     +N     LAA  GH      L E
Sbjct: 108 LDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCE 149

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	691
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	9e-06
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	0.001
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	1e-05
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-05
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	7e-05
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	2e-05
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	7e-05
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	1e-04

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (107), Expect = 9e-06
 Identities = 12/61 (19%), Positives = 23/61 (37%)

Query: 144 CKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLL 203
            +   G T L L   + +L   + L++ +H  +    +     + LA     K   E L 
Sbjct: 214 VRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLC 273

Query: 204 E 204
           +
Sbjct: 274 K 274

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (91), Expect = 0.001
 Identities = 11/67 (16%), Positives = 22/67 (32%)

Query: 149 GNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLEETPG 208
            N +L       ++   + L++    +  ++      P+H A     +D  E LL     
Sbjct: 5   DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD 64

Query: 209 RVENFYC 215
            V     
Sbjct: 65  PVLRKKN 71

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (107), Expect = 1e-05
 Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 7/75 (9%)

Query: 130 LAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHL 189
           L +    ++       +    T L + A  G+ + +K L+++K ++  K  +  + P+H 
Sbjct: 20  LQRGASPNV------SNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQT-PLHC 72

Query: 190 AALFGHKDTFEYLLE 204
           AA  GH +  + LLE
Sbjct: 73  AARIGHTNMVKLLLE 87

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (106), Expect = 2e-05
 Identities = 44/299 (14%), Positives = 90/299 (30%), Gaps = 33/299 (11%)

Query: 151 TVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLLEETPGRV 210
           T L + +  G+L   K L++      +      + P+H+AA  GH +  +YLL+    + 
Sbjct: 2   TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVET-PLHMAARAGHTEVAKYLLQN---KA 57

Query: 211 ENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGS 270
           +      D    L    +    ++   LL+N+        +    L              
Sbjct: 58  KVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHI------------ 105

Query: 271 RLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHS---KKSIPYGSTQQITT 327
                     + +    +   +       G T   +    G     +  +   +      
Sbjct: 106 ---AAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAG 162

Query: 328 YDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVN 387
            +   P   A++   L      +IV+ +       +    N     L  A +    E   
Sbjct: 163 KNGLTPLHVAVHHNNL------DIVKLLLPRGGSPHSPAWNGYT-PLHIAAKQNQVEVAR 215

Query: 388 EFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHL 446
             +     +    + Q      LA      ++   +  + S   + +L +KSG   LHL
Sbjct: 216 SLLQYGGSAN-AESVQGVTPLHLAAQEGHAEM---VALLLSKQANGNLGNKSGLTPLHL 270

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.4 bits (101), Expect = 7e-05
 Identities = 12/63 (19%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 144 CKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLL 203
            K   G + L   A +G+     +L+K+        ++  + P+ +A   G+    + L 
Sbjct: 325 AKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEV-SSDGTTPLAIAKRLGYISVTDVLK 383

Query: 204 EET 206
             T
Sbjct: 384 VVT 386

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 44.7 bits (104), Expect = 2e-05
 Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 1/61 (1%)

Query: 144 CKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQNSLPVHLAALFGHKDTFEYLL 203
            +D  G T + L A  G ++    L++    +       +     LA    H +  +   
Sbjct: 216 KQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAV-DATDHTARQLAQANNHHNIVDIFD 274

Query: 204 E 204
            
Sbjct: 275 R 275

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.8 bits (99), Expect = 7e-05
 Identities = 32/245 (13%), Positives = 59/245 (24%), Gaps = 11/245 (4%)

Query: 149 GNTVLSLCAIRGNLKASKILVKHK--HELLIKQTNQNSLPVHLAALFGHKDTFEYLLEET 206
           G+T L L  I  +      L+     HE L  Q +     +HLAA+ G   T E L    
Sbjct: 9   GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAG 68

Query: 207 PGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAF 266
            G +     G     L     +   +  A  LL+  P    D     +       +    
Sbjct: 69  AGVLVAERGGHTALHL---ACRVRAHTCACVLLQPRPSHPRDASDTYLT----QSQDCTP 121

Query: 267 ESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVA-GDTENGIGTTNGHSKKSIPYGSTQQI 325
           ++      ++           +             D    +     H    +        
Sbjct: 122 DTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAG 181

Query: 326 TTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEF 385
              +   P             +   ++  + +             +  L +A     P  
Sbjct: 182 ADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGG-RTPLGSALLRPNPIL 240

Query: 386 VNEFI 390
                
Sbjct: 241 ARLLR 245

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 42.2 bits (98), Expect = 1e-04
 Identities = 30/215 (13%), Positives = 61/215 (28%), Gaps = 15/215 (6%)

Query: 63  EKYRRHLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDE 122
              +   ++ +++ +          Q  +D  K+       +     I G    ++T   
Sbjct: 53  PGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIK-SEVICFVAAITGCSSALDT--- 108

Query: 123 ATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIK-QTN 181
              L   L     V +                L A  G+L     L +     ++     
Sbjct: 109 ---LCLLLTSDEIVKV------IQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQA 159

Query: 182 QNSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKN 241
           +N     LAA  GH      L E  P          +        +    ++V  N L +
Sbjct: 160 ENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVI-NFLLD 218

Query: 242 HPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLE 276
            P ++   +  +       + P+     +RL  + 
Sbjct: 219 CPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMH 253

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	691
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	100.0
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	100.0
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	100.0
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	100.0
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	100.0
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	100.0
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	100.0
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	100.0
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	100.0
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	100.0
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	100.0
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	100.0
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	100.0
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	100.0
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	100.0
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.97
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.97
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.97
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.96
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.96
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.95
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.95
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.94
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.93
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.92
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.92
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.92
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.88
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.88
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.87
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.87
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.86
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.85
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.85
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.83

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=286.27  Aligned_cols=175  Identities=19%  Similarity=0.163  Sum_probs=152.0

Q ss_pred             CHHHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             19999999909999999998209011100267898865000000110022248889899999986258887866424679
Q 005556           68 HLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDG  147 (691)
Q Consensus        68 ~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~  147 (691)
                      .||||.||..|+.+.|+.|++.+.+ ++..  +..|+||||+      |+..|  +.+++++|+++|   .+  ++.+|.
T Consensus         1 ~TpL~~Aa~~g~~~~v~~Ll~~g~~-in~~--d~~g~TpL~~------A~~~g--~~~iv~~Ll~~g---ad--i~~~~~   64 (408)
T d1n11a_           1 LTPLHVASFMGHLPIVKNLLQRGAS-PNVS--NVKVETPLHM------AARAG--HTEVAKYLLQNK---AK--VNAKAK   64 (408)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCC-SCCS--SSCCCCHHHH------HHHHT--CHHHHHHHHHHT---CC--SSCCCT
T ss_pred             CCHHHHHHHCCCHHHHHHHHHCCCC-CCCC--CCCCCCHHHH------HHHCC--CHHHHHHHHHCC---CC--CCCCCC
T ss_conf             9869999988489999999978789-9988--9999889999------99868--899999999885---99--887799


Q ss_pred             CCCHHHHHHHHCCCHHHHHHHHHCCCH--------------------------------HHHCCCCC-CCCHHHHHHHCC
Q ss_conf             999088799971999999999970921--------------------------------11028999-980999999819
Q 005556          148 GGNTVLSLCAIRGNLKASKILVKHKHE--------------------------------LLIKQTNQ-NSLPVHLAALFG  194 (691)
Q Consensus       148 ~G~TpLh~Aa~~G~~~ivk~Ll~~~~~--------------------------------l~~~~~n~-G~TpL~~Aa~~g  194 (691)
                      .|.||||+|+..|+.+++++|++..++                                .. ...+. +.++++.|+..+
T Consensus        65 ~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~a~~~~  143 (408)
T d1n11a_          65 DDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQ-ACMTKKGFTPLHVAAKYG  143 (408)
T ss_dssp             TSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTT
T ss_pred             CCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC-CCCCCCCCHHHHHHHHCC
T ss_conf             9899999999869977999998741001232111220245554303322222222110010-014564642899998759


Q ss_pred             CHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCC-CCHHHHHHCCC
Q ss_conf             9679999875099986654569997819999998294999999997099975577999-99889987199
Q 005556          195 HKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQ-KMALDSLALKP  263 (691)
Q Consensus       195 ~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~-~tpLh~Aa~~~  263 (691)
                      +.+++++|++.+...+.   .+.+|.+|||.|+..++.++++.|++++++.... +.. .||+|.+....
T Consensus       144 ~~~~v~~ll~~~~~~~~---~~~~~~~~L~~A~~~~~~~~~~~Ll~~g~~~~~~-~~~~~t~l~~~~~~~  209 (408)
T d1n11a_         144 KVRVAELLLERDAHPNA---AGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSP-AWNGYTPLHIAAKQN  209 (408)
T ss_dssp             CHHHHHHHHHTTCCTTC---CCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCC-CTTCCCHHHHHHHTT
T ss_pred             CHHHHHHHHHCCCCCCC---CCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCC-CCCCCCCCHHHHCCC
T ss_conf             89999999976998886---7876740999999859999999998658840045-778997102432021

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-43  Score=257.61  Aligned_cols=315  Identities=14%  Similarity=0.092  Sum_probs=233.6

Q ss_pred             HCCHHHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHCCCCCCHHCCCCCCHHHHHHHHHCCCCCC-------
Q ss_conf             1219999999909999999998209011100267898865000000110022248889899999986258887-------
Q 005556           66 RRHLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDI-------  138 (691)
Q Consensus        66 ~~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~-------  138 (691)
                      .+.||||.|+..|+.+.++.|++.+.+ ++.+  +.+|.||||+      |+..|  +.++++.|++......       
T Consensus        32 ~g~TpL~~A~~~g~~~iv~~Ll~~gad-i~~~--~~~g~t~L~~------A~~~g--~~~~~~~Ll~~~~~~~~~~~~~~  100 (408)
T d1n11a_          32 KVETPLHMAARAGHTEVAKYLLQNKAK-VNAK--AKDDQTPLHC------AARIG--HTNMVKLLLENNANPNLATTAGH  100 (408)
T ss_dssp             CCCCHHHHHHHHTCHHHHHHHHHHTCC-SSCC--CTTSCCHHHH------HHHHT--CHHHHHHHHHHTCCTTCCCTTCC
T ss_pred             CCCCHHHHHHHCCCHHHHHHHHHCCCC-CCCC--CCCCCCHHHH------HHHCC--CHHHHHHHHHHHHCCCCCCCCCC
T ss_conf             998899999986889999999988599-8877--9998999999------99869--97799999874100123211122


Q ss_pred             ---------------------CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCC-CCCHHHHHHHCCCH
Q ss_conf             ---------------------86642467999908879997199999999997092111028999-98099999981996
Q 005556          139 ---------------------SETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHK  196 (691)
Q Consensus       139 ---------------------~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpL~~Aa~~g~~  196 (691)
                                           .......+..+.++|+.|+..++.++++.|++.+.++.  ..+. |.+|||+|+..|+.
T Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~--~~~~~~~~~L~~A~~~~~~  178 (408)
T d1n11a_         101 TPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPN--AAGKNGLTPLHVAVHHNNL  178 (408)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT--CCCSSCCCHHHHHHHTTCH
T ss_pred             CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHHCCCH
T ss_conf             02455543033222222221100100145646428999987598999999997699888--6787674099999985999


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCC-CCHHHHHHCCCCCCCCCCCCHHH
Q ss_conf             79999875099986654569997819999998294999999997099975577999-99889987199854568731023
Q 005556          197 DTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQ-KMALDSLALKPYAFESGSRLGCL  275 (691)
Q Consensus       197 ~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~-~tpLh~Aa~~~~~f~s~~~l~~~  275 (691)
                      +++++|++.+.+...   .+..|.||+|.++...+.+....++........ .+.. .|||+.|+..+       ...++
T Consensus       179 ~~~~~Ll~~g~~~~~---~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~t~l~~a~~~~-------~~~~~  247 (408)
T d1n11a_         179 DIVKLLLPRGGSPHS---PAWNGYTPLHIAAKQNQVEVARSLLQYGGSANA-ESVQGVTPLHLAAQEG-------HAEMV  247 (408)
T ss_dssp             HHHHHHGGGTCCSCC---CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTT-------CHHHH
T ss_pred             HHHHHHHHCCCCCCC---CCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHHC-------CHHHH
T ss_conf             999999865884004---577899710243202104555554320012212-4778999999999808-------67675


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             44342145311125578999998899888887666888888888986421124788401699999985448899999999
Q 005556          276 EGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFI  355 (691)
Q Consensus       276 ~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lL~~l  355 (691)
                      +.++........               .+                          .........+...++....++|   
T Consensus       248 ~~~~~~~~~~~~---------------~~--------------------------~~g~~~l~~a~~~~~~~i~~~L---  283 (408)
T d1n11a_         248 ALLLSKQANGNL---------------GN--------------------------KSGLTPLHLVAQEGHVPVADVL---  283 (408)
T ss_dssp             HHHHTTTCCTTC---------------CC--------------------------TTCCCHHHHHHHHTCHHHHHHH---
T ss_pred             HHHHCCCCCCCC---------------CC--------------------------CCCCCHHHHHHHCCCHHHHHHH---
T ss_conf             442002211111---------------24--------------------------7899733454302848999999---


Q ss_pred             HHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCC
Q ss_conf             99877620210067771899999819499999999977821011236997299999961993388987608976654444
Q 005556          356 CENVIWTNRANRNKLKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISL  435 (691)
Q Consensus       356 ~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~  435 (691)
                      ++...+.+... ..+.||||.++..++.++++.+++.+.+ ++.+|.+|+||||+|+++|+.+++++|+++|   +++|.
T Consensus       284 l~~g~~~~~~~-~~~~t~L~~~~~~~~~~~~~~ll~~g~~-in~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~G---Ad~n~  358 (408)
T d1n11a_         284 IKHGVMVDATT-RMGYTPLHVASHYGNIKLVKFLLQHQAD-VNAKTKLGYSPLHQAAQQGHTDIVTLLLKNG---ASPNE  358 (408)
T ss_dssp             HHHTCCTTCCC-SSCCCHHHHHHHSSCSHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT---CCSCC
T ss_pred             HHCCCCCCCCC-CCCCCCCHHHCCCCCCEEEEEECCCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC---CCCCC
T ss_conf             97799656210-2344530221005862135530133332-2346899999999999868899999999878---89988


Q ss_pred             CCCCCCCHHHHHHCCCCC
Q ss_conf             458998242331015788
Q 005556          436 EDKSGNNILHLTGKSEPS  453 (691)
Q Consensus       436 ~D~~G~TpLHlAa~~~~~  453 (691)
                      +|++|+||||+|++.|+.
T Consensus       359 ~d~~G~t~L~~A~~~~~~  376 (408)
T d1n11a_         359 VSSDGTTPLAIAKRLGYI  376 (408)
T ss_dssp             CCSSSCCHHHHHHHTTCH
T ss_pred             CCCCCCCHHHHHHHCCCH
T ss_conf             799998999999983999

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.1e-39  Score=237.14  Aligned_cols=233  Identities=16%  Similarity=0.027  Sum_probs=149.9

Q ss_pred             CCCCCCCHHHHCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHC
Q ss_conf             78988650000001100222488898999999862588878664246799990887999719999999999709211102
Q 005556           99 FLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIK  178 (691)
Q Consensus        99 ~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~  178 (691)
                      ++.+|+||||+      ||..|  +.+++++|++.+.. +.. ++.+|..|.||||+||..|+.+++++|++.+.++.  
T Consensus         5 i~~~G~t~Lh~------A~~~~--~~~~v~~Ll~~~a~-~~~-i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i~--   72 (255)
T d1oy3d_           5 VTEDGDTALHL------AVIHQ--HEPFLDFLLGFSAG-HEY-LDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVL--   72 (255)
T ss_dssp             CCTTCCCHHHH------HHHTT--CHHHHHHHHHHHTT-SGG-GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS--
T ss_pred             CCCCCCCHHHH------HHHCC--CHHHHHHHHHCCCC-CCC-CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCC--
T ss_conf             89599789999------99858--89999999986999-001-15758999972406876245432322223333322--


Q ss_pred             CCCC-CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHH
Q ss_conf             8999-980999999819967999987509998665456999781999999829499999999709997557799999889
Q 005556          179 QTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALD  257 (691)
Q Consensus       179 ~~n~-G~TpL~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~~tpLh  257 (691)
                      .+|. |.||||+|+..|+.+++++|++.......      ............-.                 .+....++.
T Consensus        73 ~~d~~g~tpL~~A~~~~~~~~~~~Ll~~~~~~~~------~~~~~~~~~~~~~~-----------------~~~~~~~~~  129 (255)
T d1oy3d_          73 VAERGGHTALHLACRVRAHTCACVLLQPRPSHPR------DASDTYLTQSQDCT-----------------PDTSHAPAA  129 (255)
T ss_dssp             CCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCC------CC--------------------------------------
T ss_pred             CCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCHHC------CCCHHHHHHHHHHC-----------------CCCHHHHHH
T ss_conf             3222221023333226825899999861420101------22025666776522-----------------430677999


Q ss_pred             HHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             98719985456873102344342145311125578999998899888887666888888888986421124788401699
Q 005556          258 SLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKA  337 (691)
Q Consensus       258 ~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (691)
                      .......          ....                                                           
T Consensus       130 ~~~~~~~----------~~~~-----------------------------------------------------------  140 (255)
T d1oy3d_         130 VDSQPNP----------ENEE-----------------------------------------------------------  140 (255)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHCCH----------HHHH-----------------------------------------------------------
T ss_conf             9862030----------6789-----------------------------------------------------------


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCH
Q ss_conf             99998544889999999999877620210067771899999819499999999977821011236997299999961993
Q 005556          338 IYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRRE  417 (691)
Q Consensus       338 i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~Lh~Av~~~~~  417 (691)
                                    ..........++... ..|.||||+|+..|+.++++.|++.+.+.....+..|.||||+|++.++.
T Consensus       141 --------------~~~~~~~~~~in~~d-~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~~A~~~~~~  205 (255)
T d1oy3d_         141 --------------EPRDEDWRLQLEAEN-YDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAA  205 (255)
T ss_dssp             -----------------CCCGGGGTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCH
T ss_pred             --------------HHHHHHCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf             --------------987653286633100-46763223332232222221000013331221334443322001233399


Q ss_pred             HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
Q ss_conf             388987608976654444458998242331015788
Q 005556          418 KVFNLIHGVNSSYFSISLEDKSGNNILHLTGKSEPS  453 (691)
Q Consensus       418 ~iv~~Ll~~~~~~~~~n~~D~~G~TpLHlAa~~~~~  453 (691)
                      +++++|+++|   ++++.+|+.|+||||+|++.++.
T Consensus       206 ~~v~~Ll~~g---adin~~d~~g~t~L~~A~~~~~~  238 (255)
T d1oy3d_         206 SVLELLLKAG---ADPTARMYGGRTPLGSALLRPNP  238 (255)
T ss_dssp             HHHHHHHHTT---CCTTCCCTTSCCHHHHHHTSSCH
T ss_pred             HHHHHHHHCC---CCCCCCCCCCCCHHHHHHHCCCH
T ss_conf             9999999878---99888799999999999987889

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=100.00  E-value=1.9e-38  Score=230.26  Aligned_cols=256  Identities=15%  Similarity=0.166  Sum_probs=191.4

Q ss_pred             CHHHHHHHHHCCHHHHH-------CCCCCCCCCCHHHHCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCH
Q ss_conf             99999999820901110-------02678988650000001100222488898999999862588878664246799990
Q 005556           79 DWQSVDGFVQSNTDILK-------EHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNT  151 (691)
Q Consensus        79 ~~~~v~~ll~~~~~~~~-------~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~T  151 (691)
                      ..+.++.+.....+...       .+ .+.++.|+|+.      ||..|  +.++|+.|++.|   .+  ++.+|..|.|
T Consensus        10 r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~t~l~~------A~~~G--~~~~v~~Ll~~G---ad--vn~~d~~G~T   75 (291)
T d1s70b_          10 RNEQLKRWIGSETDLEPPVVKRKKTK-VKFDDGAVFLA------ACSSG--DTEEVLRLLERG---AD--INYANVDGLT   75 (291)
T ss_dssp             HHHHHHHHHHTTTSSCCSCCCCSCCC-CEECHHHHHHH------HHHHT--CHHHHHHHHHHC---CC--TTCBCTTCCB
T ss_pred             HHHHHHHHHHCCCCCCCCHHHCCCCC-CCCCCCHHHHH------HHHCC--CHHHHHHHHHCC---CC--CCCCCCCCCC
T ss_conf             59999999737643367112113445-68899669999------99858--899999999879---99--8866899996


Q ss_pred             HHHHHHHCCCHHHHHHHHHCCCHHHHCCCCC-CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCC
Q ss_conf             8879997199999999997092111028999-980999999819967999987509998665456999781999999829
Q 005556          152 VLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKAN  230 (691)
Q Consensus       152 pLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpL~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~A~~~g  230 (691)
                      |||+|+..|+.+++++|++.+.+..  ..+. +.+||++|+..++.++++.|++.+.....   .+.+|.++++.|+..+
T Consensus        76 ~L~~A~~~g~~eiv~~Ll~~~~~~~--~~~~~~~~~L~~a~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~a~~~~  150 (291)
T d1s70b_          76 ALHQACIDDNVDMVKFLVENGANIN--QPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGA---VNSEGDTPLDIAEEEA  150 (291)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC---CCTTSCCHHHHCCSHH
T ss_pred             HHHHHHHCCCCEEEEEECCCCCCCC--CCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCC---CCCCCCCCCCCCCCCC
T ss_conf             9999986197312110012223333--3222323333333222211001101246764222---2246764222211122


Q ss_pred             CHHHHHHHHHHCCCCCCCCCCC-CCHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             4999999997099975577999-998899871998545687310234434214531112557899999889988888766
Q 005556          231 LYDVALNLLKNHPEIVHDIDSQ-KMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTT  309 (691)
Q Consensus       231 ~~~iv~~Ll~~~~~l~~~~d~~-~tpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~  309 (691)
                      ..+.+..++............. ..+.+.                                                   
T Consensus       151 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~---------------------------------------------------  179 (291)
T d1s70b_         151 MEELLQNEVNRQGVDIEAARKEEERIMLR---------------------------------------------------  179 (291)
T ss_dssp             HHHHHHHHHHHHTCCHHHHHHHHHHHHHH---------------------------------------------------
T ss_pred             CCHHCCCCCCCCCCCCCCCCCCCCCCCCC---------------------------------------------------
T ss_conf             20001000002465321100001333221---------------------------------------------------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHH
Q ss_conf             68888888889864211247884016999999854488999999999987762021006777189999981949999999
Q 005556          310 NGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEF  389 (691)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~L  389 (691)
                                                           ....   .+........ .....|.||||.|+..|+.++++.|
T Consensus       180 -------------------------------------~~~~---~~~~~~~~~~-~~~~~g~t~L~~a~~~~~~~~~~~L  218 (291)
T d1s70b_         180 -------------------------------------DARQ---WLNSGHINDV-RHAKSGGTALHVAAAKGYTEVLKLL  218 (291)
T ss_dssp             -------------------------------------HHHH---HHHHTCCCCC-CCTTTCCCHHHHHHHHTCHHHHHHH
T ss_pred             -------------------------------------CCHH---HHCCCCCCCC-CCCCCCCCHHHHHHHCCCHHHHCCC
T ss_conf             -------------------------------------1001---1012321100-2467898730488876995441013


Q ss_pred             HHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHC
Q ss_conf             997782101123699729999996199338898760897665444445899824233101
Q 005556          390 IMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHLTGK  449 (691)
Q Consensus       390 l~~~~~~~~~~d~~G~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~D~~G~TpLHlAa~  449 (691)
                      ++.+.+ ++.+|..|+||||+|+..|+.+++++|+++|   ++++.+|+.|+||||+|++
T Consensus       219 l~~g~d-in~~~~~g~TpL~~A~~~g~~~iv~lLl~~G---adv~~~d~~G~TaL~~A~e  274 (291)
T d1s70b_         219 IQARYD-VNIKDYDGWTPLHAAAHWGKEEACRILVENL---CDMEAVNKVGQTAFDVADE  274 (291)
T ss_dssp             HTTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCTTTSCCS
T ss_pred             CCCEEC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC---CCCCCCCCCCCCHHHHHHH
T ss_conf             441011-2421257988999999859899999999879---9998868999999999999

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=5.4e-40  Score=238.91  Aligned_cols=254  Identities=14%  Similarity=0.136  Sum_probs=164.8

Q ss_pred             CCHHHHCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCC-CCCCHHHHHHHHCCCHHHHHHHHHC--------CCH
Q ss_conf             6500000011002224888989999998625888786642467-9999088799971999999999970--------921
Q 005556          104 LTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKD-GGGNTVLSLCAIRGNLKASKILVKH--------KHE  174 (691)
Q Consensus       104 ~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d-~~G~TpLh~Aa~~G~~~ivk~Ll~~--------~~~  174 (691)
                      +||||+      ++..++ ...+++.|.+.+       ++..+ ++|+||||+||..|+.++++.|+..        +.+
T Consensus         1 ~~p~~~------~~~~~~-~~~~~~~l~~~~-------~n~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gad   66 (277)
T d2fo1e1           1 ESPIKL------HTEAAG-SYAITEPITRES-------VNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGAD   66 (277)
T ss_dssp             CCCCHH------HHHHHS-SSCCCSCCSTTT-------TTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCC
T ss_pred             CCHHHH------HHHHCC-CHHHHHHHHHCC-------CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCHHHHHHCCCC
T ss_conf             986999------998179-888999998669-------986779999669999998689999999996523679876997


Q ss_pred             HHHCCCCC-CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCC--CCCCCCC
Q ss_conf             11028999-98099999981996799998750999866545699978199999982949999999970999--7557799
Q 005556          175 LLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPE--IVHDIDS  251 (691)
Q Consensus       175 l~~~~~n~-G~TpL~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~--l~~~~d~  251 (691)
                      ++  .+|. |.||||+|+..|+.+++++|++++++..   .++.+|.|+|+.|+..++.++...+......  .....+.
T Consensus        67 vn--~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~n---~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~  141 (277)
T d2fo1e1          67 VN--AMDCDENTPLMLAVLARRRRLVAYLMKAGADPT---IYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDR  141 (277)
T ss_dssp             TT--CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC---CCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCT
T ss_pred             CC--CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             64--547888851003433333333333322322233---2222222222100110000123444311454222222222


Q ss_pred             C-CCHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             9-998899871998545687310234434214531112557899999889988888766688888888898642112478
Q 005556          252 Q-KMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDA  330 (691)
Q Consensus       252 ~-~tpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (691)
                      . .++.+.+...+..    .....+..+..........                                          
T Consensus       142 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~------------------------------------------  175 (277)
T d2fo1e1         142 NGMTALMIVAHNEGR----DQVASAKLLVEKGAKVDYD------------------------------------------  175 (277)
T ss_dssp             TSCCHHHHHHHSCST----THHHHHHHHHHHTCCSSCC------------------------------------------
T ss_pred             CCCHHHHHHHHCCCC----CCCCCCCCCCCCCCCCCCC------------------------------------------
T ss_conf             110367888750343----3222221001123322222------------------------------------------


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf             84016999999854488999999999987762021006777189999981949999999997782101123699729999
Q 005556          331 KWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFEL  410 (691)
Q Consensus       331 ~~~~~~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~Lh~  410 (691)
                                                 .....+... ..|.||||.++..|+.++++.++...+...+.+|..|+||||+
T Consensus       176 ---------------------------~~~~~~~~~-~~g~t~L~~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~tpL~~  227 (277)
T d2fo1e1         176 ---------------------------GAARKDSEK-YKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIML  227 (277)
T ss_dssp             ---------------------------SGGGTSSSS-CCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHH
T ss_pred             ---------------------------CCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf             ---------------------------234555446-6898700001223332222232223454333468999989999


Q ss_pred             HHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
Q ss_conf             9961993388987608976654444458998242331015788
Q 005556          411 AVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHLTGKSEPS  453 (691)
Q Consensus       411 Av~~~~~~iv~~Ll~~~~~~~~~n~~D~~G~TpLHlAa~~~~~  453 (691)
                      |+++|+.+++++|++.|   +++|.+|+.|+||||+|++.|+.
T Consensus       228 A~~~g~~~iv~~Ll~~g---adin~~d~~G~T~L~~A~~~~~~  267 (277)
T d2fo1e1         228 AAQEGRIEVVMYLIQQG---ASVEAVDATDHTARQLAQANNHH  267 (277)
T ss_dssp             HHHHTCHHHHHHHHHTT---CCSSCCCSSSCCHHHHHHHTTCH
T ss_pred             HHHCCCHHHHHHHHHCC---CCCCCCCCCCCCHHHHHHHCCCH
T ss_conf             99859899999999876---99988699999999999985989

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.7e-38  Score=230.54  Aligned_cols=227  Identities=12%  Similarity=0.025  Sum_probs=171.9

Q ss_pred             CCHHHHHHHHCCCHHHHHHHHHCC--HHHHHCCCCCCCCCCHHHHCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             219999999909999999998209--011100267898865000000110022248889899999986258887866424
Q 005556           67 RHLELYRMIQMNDWQSVDGFVQSN--TDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSC  144 (691)
Q Consensus        67 ~~~~L~~A~~~G~~~~v~~ll~~~--~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~  144 (691)
                      +.|+||.|+..|+.+.++.|++.+  +..++.+  +..|.||||+      |+..|  +.++++.|++.|   .+  ++.
T Consensus         9 G~t~Lh~A~~~~~~~~v~~Ll~~~a~~~~i~~~--~~~g~TpL~~------A~~~g--~~~iv~~Ll~~g---a~--i~~   73 (255)
T d1oy3d_           9 GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQ--NDLGQTALHL------AAILG--EASTVEKLYAAG---AG--VLV   73 (255)
T ss_dssp             CCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCC--CTTSCCHHHH------HHHHT--CHHHHHHHHHTT---CC--SSC
T ss_pred             CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC--CCCCCCCCCH------HHHHC--CCCCCCCCCCCC---CC--CCC
T ss_conf             978999999858899999999869990011575--8999972406------87624--543232222333---33--223


Q ss_pred             CCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCC---------C-CCCHHHHHHHCCCHHHHHHHHHCCCC-CCCCC
Q ss_conf             6799990887999719999999999709211102899---------9-98099999981996799998750999-86654
Q 005556          145 KDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTN---------Q-NSLPVHLAALFGHKDTFEYLLEETPG-RVENF  213 (691)
Q Consensus       145 ~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n---------~-G~TpL~~Aa~~g~~~iv~~Ll~~~~~-~~~~~  213 (691)
                      +|..|.||||+|+..|+.+++++|++...... ....         . +.+....+.................. ....+
T Consensus        74 ~d~~g~tpL~~A~~~~~~~~~~~Ll~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in  152 (255)
T d1oy3d_          74 AERGGHTALHLACRVRAHTCACVLLQPRPSHP-RDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLE  152 (255)
T ss_dssp             CCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSC-CCC-----------------------------------CCCGGGGTT
T ss_pred             CCCCCCHHHHHHHCCCCHHHHHHHHHHCCCHH-CCCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCC
T ss_conf             22222102333322682589999986142010-12202566677652243067799998620306789987653286633


Q ss_pred             CCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             56999781999999829499999999709997557799999889987199854568731023443421453111255789
Q 005556          214 YCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTN  293 (691)
Q Consensus       214 ~~~~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~~tpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~  293 (691)
                      .++.+|.||||+|+..++.++++.|++.+.+.....+                                           
T Consensus       153 ~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~-------------------------------------------  189 (255)
T d1oy3d_         153 AENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEP-------------------------------------------  189 (255)
T ss_dssp             CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT-------------------------------------------
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC-------------------------------------------
T ss_conf             1004676322333223222222100001333122133-------------------------------------------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf             99998899888887666888888888986421124788401699999985448899999999998776202100677718
Q 005556          294 DNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGA  373 (691)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tp  373 (691)
                                                                                                ..|.||
T Consensus       190 --------------------------------------------------------------------------~~g~Tp  195 (255)
T d1oy3d_         190 --------------------------------------------------------------------------TCGRTP  195 (255)
T ss_dssp             --------------------------------------------------------------------------TTCCCH
T ss_pred             --------------------------------------------------------------------------CCCCCC
T ss_conf             --------------------------------------------------------------------------444332


Q ss_pred             HHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCC
Q ss_conf             999998194999999999778210112369972999999619933889876089
Q 005556          374 LFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVN  427 (691)
Q Consensus       374 Lh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~Lh~Av~~~~~~iv~~Ll~~~  427 (691)
                      ||+|++.|+.++++.|++++.+ ++.+|..|+||||+|+.+++.+++++|+++|
T Consensus       196 L~~A~~~~~~~~v~~Ll~~gad-in~~d~~g~t~L~~A~~~~~~~i~~~Ll~~G  248 (255)
T d1oy3d_         196 LHLAVEAQAASVLELLLKAGAD-PTARMYGGRTPLGSALLRPNPILARLLRAHG  248 (255)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHTSSCHHHHHHHHHTT
T ss_pred             CCCCCCCCHHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC
T ss_conf             2001233399999999987899-8887999999999999878899999999769

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.5e-37  Score=221.25  Aligned_cols=270  Identities=17%  Similarity=0.151  Sum_probs=215.0

Q ss_pred             CCHHHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             21999999990999999999820901110026789886500000011002224888989999998625888786642467
Q 005556           67 RHLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKD  146 (691)
Q Consensus        67 ~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d  146 (691)
                      +.+.|+.|+..|+.+.|+.|++.+.+. +.+ .+..|.||||+      |+..|  +.++++.|++.+   ..  ....+
T Consensus         5 ~~~~L~~Ai~~~~~e~vk~Ll~~G~di-n~~-~~~~g~tpL~~------A~~~~--~~eiv~~L~~~~---~~--~~~~~   69 (285)
T d1wdya_           5 DNHLLIKAVQNEDVDLVQQLLEGGANV-NFQ-EEEGGWTPLHN------AVQMS--REDIVELLLRHG---AD--PVLRK   69 (285)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHTTCCT-TCC-CTTTCCCHHHH------HHHTT--CHHHHHHHHHTT---CC--TTCCC
T ss_pred             CCHHHHHHHHCCCHHHHHHHHHCCCCC-CCC-CCCCCCCHHHH------HHHCC--CHHHHHHHCCCC---CC--CCCCC
T ss_conf             848999999829999999999879896-824-89999799999------99859--998865520234---32--22222


Q ss_pred             CCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCC-CCCHHHHHHHCCCHHHHHHHHHCCCCCCCC-------CCCCCC
Q ss_conf             999908879997199999999997092111028999-980999999819967999987509998665-------456999
Q 005556          147 GGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVEN-------FYCGGD  218 (691)
Q Consensus       147 ~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpL~~Aa~~g~~~iv~~Ll~~~~~~~~~-------~~~~~~  218 (691)
                      ..+.+|.+.|+..+..+.....++...+..  ..+. |.|+++.|+..|+...++.++.........       ......
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (285)
T d1wdya_          70 KNGATPFLLAAIAGSVKLLKLFLSKGADVN--ECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKG  147 (285)
T ss_dssp             TTCCCHHHHHHHHTCHHHHHHHHHTTCCTT--CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCC
T ss_pred             CCCCHHHHHHHHCCCCCCCCHHHHHCCCCC--CCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCC
T ss_conf             111114677764387532211343102210--135689863678887400125445443100113232101222220146


Q ss_pred             CCCHHHHHHHCCCHHHHHHHHHHCC-CCCCCCCCC-CCHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             7819999998294999999997099-975577999-99889987199854568731023443421453111255789999
Q 005556          219 GGRLLSDLIKANLYDVALNLLKNHP-EIVHDIDSQ-KMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNP  296 (691)
Q Consensus       219 G~t~Lh~A~~~g~~~iv~~Ll~~~~-~l~~~~d~~-~tpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~  296 (691)
                      |.||||+|+..++.++++.|+++.. ++.. .+.. .++++.+......   +.                          
T Consensus       148 g~t~L~~A~~~~~~~~~~~Ll~~~~~~i~~-~~~~~~~~~~~~~~~~~~---~~--------------------------  197 (285)
T d1wdya_         148 GATALMDAAEKGHVEVLKILLDEMGADVNA-CDNMGRNALIHALLSSDD---SD--------------------------  197 (285)
T ss_dssp             CCCHHHHHHHHTCHHHHHHHHHTSCCCTTC-CCTTSCCHHHHHHHCSCT---TT--------------------------
T ss_pred             CCHHHHHHHHCCCHHHHHHHHHCCCCCCCC-CCCCCCCCCCCCCCCCCC---HH--------------------------
T ss_conf             856999999868999999998456989455-467898332233223430---17--------------------------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf             98899888887666888888888986421124788401699999985448899999999998776202100677718999
Q 005556          297 NVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFT  376 (691)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~  376 (691)
                                                                         ...+++.+.+...+++..+ ..|.||||.
T Consensus       198 ---------------------------------------------------~~~i~~~Li~~ga~~n~~~-~~g~t~L~~  225 (285)
T d1wdya_         198 ---------------------------------------------------VEAITHLLLDHGADVNVRG-ERGKTPLIL  225 (285)
T ss_dssp             ---------------------------------------------------HHHHHHHHHHTTCCSSCCC-TTSCCHHHH
T ss_pred             ---------------------------------------------------HHHHHHHHHHCCCCCCCCC-CCCCCCCCH
T ss_conf             ---------------------------------------------------9999999997799988668-999982411


Q ss_pred             HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             99819499999999977821011236997299999961993388987608976654444458
Q 005556          377 ATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDK  438 (691)
Q Consensus       377 Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~D~  438 (691)
                      |++.|+.++|+.|++.++..++.+|.+|+||||+|+++++.+++++|+++|   +++|++|-
T Consensus       226 a~~~~~~~~v~~lL~~~g~din~~d~~G~TpL~~A~~~~~~eiv~~Ll~~G---Ad~n~~d~  284 (285)
T d1wdya_         226 AVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRG---ASTDCGDL  284 (285)
T ss_dssp             HHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS---SCSCCSSC
T ss_pred             HHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC---CCCCCCCC
T ss_conf             221386999999998089998687999989999999859799999999879---89986017

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-37  Score=225.50  Aligned_cols=118  Identities=16%  Similarity=0.152  Sum_probs=59.0

Q ss_pred             HHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCC-CCCHHHHHHHCC
Q ss_conf             2224888989999998625888786642467999908879997199999999997092111028999-980999999819
Q 005556          116 DVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFG  194 (691)
Q Consensus       116 Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpL~~Aa~~g  194 (691)
                      +|..|  +.+.++.++...   +.. ++.+|..|+||||+||..|+.++++++++......  ..+. +.++++.++..|
T Consensus        10 ~a~~G--~~~~v~~~l~~~---~~~-~~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~   81 (223)
T d1uoha_          10 LAYSG--KLEELKESILAD---KSL-ATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVN--DKDDAGWSPLHIAASAG   81 (223)
T ss_dssp             HHHTT--CHHHHHHHHHHC---GGG-GGCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSC--CCCTTCCCHHHHHHHHT
T ss_pred             HHHHC--CHHHHHHHHHHC---CCC-CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCC
T ss_conf             99969--999999999949---974-76748999888999998511024332222233333--22222223322222211


Q ss_pred             CHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCC
Q ss_conf             96799998750999866545699978199999982949999999970999
Q 005556          195 HKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPE  244 (691)
Q Consensus       195 ~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~  244 (691)
                      +.+++++|++.+.+.+   ..+.+|.||||+|+..++.++++.|++++.+
T Consensus        82 ~~~i~~~Ll~~~~d~~---~~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d  128 (223)
T d1uoha_          82 RDEIVKALLGKGAQVN---AVNQNGCTPLHYAASKNRHEIAVMLLEGGAN  128 (223)
T ss_dssp             CHHHHHHHHHTTCCTT---CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred             CCCHHHHHHCCCCEEE---EECCCCCCHHHHHHHCCCHHHHHHHHHCCCC
T ss_conf             1101677740686467---5489999662698876989999999987899

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-37  Score=225.36  Aligned_cols=218  Identities=15%  Similarity=0.103  Sum_probs=187.8

Q ss_pred             CHHHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             19999999909999999998209011100267898865000000110022248889899999986258887866424679
Q 005556           68 HLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDG  147 (691)
Q Consensus        68 ~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~  147 (691)
                      ++.|+.++..|+.+.++.++..++..++.+  |..|+||||+      ||..|  +.+++++|++.+   ..  ....+.
T Consensus         4 ~~~~~~~a~~G~~~~v~~~l~~~~~~~~~~--D~~G~TpLh~------Aa~~g--~~e~~~~l~~~~---~~--~~~~~~   68 (223)
T d1uoha_           4 NLMVCNLAYSGKLEELKESILADKSLATRT--DQDSRTALHW------ACSAG--HTEIVEFLLQLG---VP--VNDKDD   68 (223)
T ss_dssp             SSHHHHHHHTTCHHHHHHHHHHCGGGGGCC--CTTSCCHHHH------HHHHT--CHHHHHHHHHHT---CC--SCCCCT
T ss_pred             HHHHHHHHHHCCHHHHHHHHHHCCCCCCCC--CCCCCCHHHH------HHHHH--HHCCCCCCCCCC---CC--CCCCCC
T ss_conf             799999999699999999999499747674--8999888999------99851--102433222223---33--332222


Q ss_pred             CCCHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCC-CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             99908879997199999999997092111028999-98099999981996799998750999866545699978199999
Q 005556          148 GGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDL  226 (691)
Q Consensus       148 ~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpL~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~A  226 (691)
                      .+.++++.++..|+.+++++|+++++++.  .+|. |.||||+|+..|+.+++++|++.+.+.+   .++..|.||||+|
T Consensus        69 ~~~~~~~~~~~~~~~~i~~~Ll~~~~d~~--~~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~~---~~~~~~~t~L~~a  143 (223)
T d1uoha_          69 AGWSPLHIAASAGRDEIVKALLGKGAQVN--AVNQNGCTPLHYAASKNRHEIAVMLLEGGANPD---AKDHYEATAMHRA  143 (223)
T ss_dssp             TCCCHHHHHHHHTCHHHHHHHHHTTCCTT--CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHH
T ss_pred             CCCCCCCCCCCCCCCCHHHHHHCCCCEEE--EECCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC---CCCCCCCCCCHHH
T ss_conf             22233222222111101677740686467--548999966269887698999999998789998---7689999501023


Q ss_pred             HHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             98294999999997099975577999998899871998545687310234434214531112557899999889988888
Q 005556          227 IKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGI  306 (691)
Q Consensus       227 ~~~g~~~iv~~Ll~~~~~l~~~~d~~~tpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~  306 (691)
                      +..++.++++.|+..+.++... |                                                        
T Consensus       144 ~~~~~~~~~~~L~~~~~~i~~~-d--------------------------------------------------------  166 (223)
T d1uoha_         144 AAKGNLKMIHILLYYKASTNIQ-D--------------------------------------------------------  166 (223)
T ss_dssp             HHTTCHHHHHHHHHTTCCSCCC-C--------------------------------------------------------
T ss_pred             HHCCCCCHHHHHCCCCCEEEEC-C--------------------------------------------------------
T ss_conf             2138742023320223201203-6--------------------------------------------------------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHH
Q ss_conf             76668888888889864211247884016999999854488999999999987762021006777189999981949999
Q 005556          307 GTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFV  386 (691)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv  386 (691)
                                                                                   ..|+||||.|+..|+.++|
T Consensus       167 -------------------------------------------------------------~~g~TpL~~Aa~~g~~~~v  185 (223)
T d1uoha_         167 -------------------------------------------------------------TEGNTPLHLACDEERVEEA  185 (223)
T ss_dssp             -------------------------------------------------------------TTCCCHHHHHHHTTCHHHH
T ss_pred             -------------------------------------------------------------CCCCCEECCCCCCCCHHHH
T ss_conf             -------------------------------------------------------------8887411210025849999


Q ss_pred             HHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHC
Q ss_conf             999997782101123699729999996199338898760
Q 005556          387 NEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHG  425 (691)
Q Consensus       387 ~~Ll~~~~~~~~~~d~~G~t~Lh~Av~~~~~~iv~~Ll~  425 (691)
                      +.|++.+.+ ++.+|..|+||||+| .+++.+|+++|++
T Consensus       186 ~~LL~~Gad-~~~~d~~g~tpl~~A-~~~~~~i~~~Ll~  222 (223)
T d1uoha_         186 KLLVSQGAS-IYIENKEEKTPLQVA-KGGLGLILKRMVE  222 (223)
T ss_dssp             HHHHHTTCC-SCCCCTTSCCHHHHC-CTTHHHHHHHHHC
T ss_pred             HHHHHCCCC-CCCCCCCCCCHHHHH-HCCCHHHHHCCCC
T ss_conf             999987799-988799999999998-7789999830047

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=9.9e-37  Score=220.58  Aligned_cols=212  Identities=14%  Similarity=0.082  Sum_probs=155.0

Q ss_pred             CCHHHHCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCHH--HHCCCC
Q ss_conf             650000001100222488898999999862588878664246799990887999719999999999709211--102899
Q 005556          104 LTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHEL--LIKQTN  181 (691)
Q Consensus       104 ~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l--~~~~~n  181 (691)
                      +||||+      ||..|  +.++++.|++..   +.. ++.+|.+|.||||+|+..|+.+++++|++.++++  . ...+
T Consensus         1 n~pLh~------A~~~g--~~~~v~~Ll~~~---~~~-~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~-~~~~   67 (229)
T d1ixva_           1 NYPLHQ------ACMEN--EFFKVQELLHSK---PSL-LLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLD-DYPD   67 (229)
T ss_dssp             CCHHHH------HHHHT--CHHHHHHHHHHC---GGG-TTCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGG-GCCC
T ss_pred             CHHHHH------HHHCC--CHHHHHHHHHCC---CCC-CCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHCCCCCC-CCCC
T ss_conf             976999------99868--999999999809---986-6565999998999999869965441354430123332-2232


Q ss_pred             C-CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
Q ss_conf             9-980999999819967999987509998665456999781999999829499999999709997557799999889987
Q 005556          182 Q-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLA  260 (691)
Q Consensus       182 ~-G~TpL~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~~tpLh~Aa  260 (691)
                      . |.+|+|+++..+..++++.++..+..... ...+..+.++++.++..++.++...|+..+...... +          
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~-~----------  135 (229)
T d1ixva_          68 DSGWTPFHIACSVGNLEVVKSLYDRPLKPDL-NKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIK-D----------  135 (229)
T ss_dssp             TTSCCHHHHHHHHTCHHHHHHHHSSSSCCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCC-C----------
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC-C----------
T ss_conf             2222222211112332333332222222222-223223344332212320034322221100232124-7----------


Q ss_pred             CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             19985456873102344342145311125578999998899888887666888888888986421124788401699999
Q 005556          261 LKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYA  340 (691)
Q Consensus       261 ~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  340 (691)
                                                                                                      
T Consensus       136 --------------------------------------------------------------------------------  135 (229)
T d1ixva_         136 --------------------------------------------------------------------------------  135 (229)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
T ss_conf             --------------------------------------------------------------------------------


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHH
Q ss_conf             98544889999999999877620210067771899999819499999999977821011236997299999961993388
Q 005556          341 EKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVF  420 (691)
Q Consensus       341 ~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~Lh~Av~~~~~~iv  420 (691)
                                                 ..|+||||.|+..|+.++++.|++.++..++.+|..|+||||+|+.+++.+++
T Consensus       136 ---------------------------~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~~d~~g~TpLh~A~~~~~~~~v  188 (229)
T d1ixva_         136 ---------------------------KFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAA  188 (229)
T ss_dssp             ---------------------------TTSCCHHHHHHHHTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHH
T ss_pred             ---------------------------CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHH
T ss_conf             ---------------------------88997350232124533233332222222223566667810221012519999


Q ss_pred             HHHHCC-CCCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf             987608-976654444458998242331015
Q 005556          421 NLIHGV-NSSYFSISLEDKSGNNILHLTGKS  450 (691)
Q Consensus       421 ~~Ll~~-~~~~~~~n~~D~~G~TpLHlAa~~  450 (691)
                      ++|++. |   ++++.+|++|.||||+|+..
T Consensus       189 ~~Ll~~~g---ad~~~~d~~g~t~l~~A~~~  216 (229)
T d1ixva_         189 VLLVEKYG---AEYDLVDNKGAKAEDVALNE  216 (229)
T ss_dssp             HHHHHHHC---CCSCCCCTTSCCTGGGCSCH
T ss_pred             HHHHHHCC---CCCCCCCCCCCCHHHHHHHH
T ss_conf             99999659---99888589999999998467

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2e-36  Score=218.90  Aligned_cols=225  Identities=16%  Similarity=0.103  Sum_probs=191.6

Q ss_pred             CHHHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             19999999909999999998209011100267898865000000110022248889899999986258887866424679
Q 005556           68 HLELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDG  147 (691)
Q Consensus        68 ~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~  147 (691)
                      ++|||.||..|+.+.++.|++..+..++.+  +.+|.||||+      |+..|  +.++++.|++.+. ++.. .+..+.
T Consensus         1 n~pLh~A~~~g~~~~v~~Ll~~~~~~~~~~--d~~G~TpL~~------A~~~g--~~~iv~~Ll~~ga-~~~~-~~~~~~   68 (229)
T d1ixva_           1 NYPLHQACMENEFFKVQELLHSKPSLLLQK--DQDGRIPLHW------SVSFQ--AHEITSFLLSKME-NVNL-DDYPDD   68 (229)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHHCGGGTTCC--CTTSCCHHHH------HHHTT--CHHHHHHHHTTCT-TCCG-GGCCCT
T ss_pred             CHHHHHHHHCCCHHHHHHHHHCCCCCCCCC--CCCCCCHHHH------HHHCC--CCCCCCHHHHHHC-CCCC-CCCCCC
T ss_conf             976999998689999999998099866565--9999989999------99869--9654413544301-2333-222322


Q ss_pred             CCCHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCC-CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             99908879997199999999997092111028999-98099999981996799998750999866545699978199999
Q 005556          148 GGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDL  226 (691)
Q Consensus       148 ~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpL~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~A  226 (691)
                      .|.+|+|+++..+..++++.++..+........+. +.||++.++..++.+++++|+..+....   ..+.+|.||||+|
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~---~~~~~g~t~l~~a  145 (229)
T d1ixva_          69 SGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVR---IKDKFNQIPLHRA  145 (229)
T ss_dssp             TSCCHHHHHHHHTCHHHHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC---CCCTTSCCHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC---CCCCCCCCCCCHH
T ss_conf             2222222111123323333322222222222232233443322123200343222211002321---2478899735023


Q ss_pred             HHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             98294999999997099975577999998899871998545687310234434214531112557899999889988888
Q 005556          227 IKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGI  306 (691)
Q Consensus       227 ~~~g~~~iv~~Ll~~~~~l~~~~d~~~tpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~  306 (691)
                      +..++.++++.|++.++......|                                                        
T Consensus       146 ~~~~~~~~~~~Ll~~~~~~in~~d--------------------------------------------------------  169 (229)
T d1ixva_         146 ASVGSLKLIELLCGLGKSAVNWQD--------------------------------------------------------  169 (229)
T ss_dssp             HHHTCHHHHHHHHTTTCCCSCCCC--------------------------------------------------------
T ss_pred             HHCCCCCCCCCCCCCCCCCCCCCC--------------------------------------------------------
T ss_conf             212453323333222222222356--------------------------------------------------------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHH
Q ss_conf             76668888888889864211247884016999999854488999999999987762021006777189999981949999
Q 005556          307 GTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFV  386 (691)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv  386 (691)
                                                                                   ..|+||||+|+..|+.++|
T Consensus       170 -------------------------------------------------------------~~g~TpLh~A~~~~~~~~v  188 (229)
T d1ixva_         170 -------------------------------------------------------------KQGWTPLFHALAEGHGDAA  188 (229)
T ss_dssp             -------------------------------------------------------------TTSCCHHHHHHHTTCHHHH
T ss_pred             -------------------------------------------------------------CCCCCCHHHHCCCCCHHHH
T ss_conf             -------------------------------------------------------------6667810221012519999


Q ss_pred             HHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCC
Q ss_conf             99999778210112369972999999619933889876089
Q 005556          387 NEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVN  427 (691)
Q Consensus       387 ~~Ll~~~~~~~~~~d~~G~t~Lh~Av~~~~~~iv~~Ll~~~  427 (691)
                      ++|++..+..++.+|+.|+||||+|+.   .+++++|+++|
T Consensus       189 ~~Ll~~~gad~~~~d~~g~t~l~~A~~---~~~~~~Ll~~g  226 (229)
T d1ixva_         189 VLLVEKYGAEYDLVDNKGAKAEDVALN---EQVKKFFLNNV  226 (229)
T ss_dssp             HHHHHHHCCCSCCCCTTSCCTGGGCSC---HHHHHHHHHHC
T ss_pred             HHHHHHCCCCCCCCCCCCCCHHHHHHH---HHHHHHHHHCC
T ss_conf             999996599988858999999999846---78999999769

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.4e-36  Score=219.77  Aligned_cols=258  Identities=13%  Similarity=0.092  Sum_probs=184.1

Q ss_pred             HHHHHHHHC-CCHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHCCCCCCHHCCCCCCHHHHHHHHHCCC----CCCCCCCC
Q ss_conf             999999990-9999999998209011100267898865000000110022248889899999986258----88786642
Q 005556           69 LELYRMIQM-NDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTD----VDISETLS  143 (691)
Q Consensus        69 ~~L~~A~~~-G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~----~~~~~~l~  143 (691)
                      +||+.++.. |....++.+.+.+.+.   . .+.+|+||||+      ||..|  +.++|+.|+.+..    ....+ ++
T Consensus         2 ~p~~~~~~~~~~~~~~~~l~~~~~n~---~-~~~~g~T~Lh~------A~~~g--~~~~v~~Ll~~~~~~~l~~Gad-vn   68 (277)
T d2fo1e1           2 SPIKLHTEAAGSYAITEPITRESVNI---I-DPRHNRTVLHW------IASNS--SAEKSEDLIVHEAKECIAAGAD-VN   68 (277)
T ss_dssp             CCCHHHHHHHSSSCCCSCCSTTTTTT---C-CCSSCCCHHHH------HHCTT--CCSCCTTHHHHHHHHHHHTCCC-TT
T ss_pred             CHHHHHHHHCCCHHHHHHHHHCCCCC---C-CCCCCCCHHHH------HHHCC--CHHHHHHHHHCCHHHHHHCCCC-CC
T ss_conf             86999998179888999998669986---7-79999669999------99868--9999999996523679876997-64


Q ss_pred             CCCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCC-CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCH
Q ss_conf             467999908879997199999999997092111028999-9809999998199679999875099986654569997819
Q 005556          144 CKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRL  222 (691)
Q Consensus       144 ~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpL~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~  222 (691)
                      .+|..|+||||+|+..|+.+++++|++.++++.  .++. |.|||++|+..++.++++++.............+..+.++
T Consensus        69 ~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~n--~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  146 (277)
T d2fo1e1          69 AMDCDENTPLMLAVLARRRRLVAYLMKAGADPT--IYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTA  146 (277)
T ss_dssp             CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC--CCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCH
T ss_pred             CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCHH
T ss_conf             547888851003433333333333322322233--222222222210011000012344431145422222222211036


Q ss_pred             HHHHHHCCCH---HHHHHHHHHCCCC-------CCCCCCC-CCHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC
Q ss_conf             9999982949---9999999709997-------5577999-998899871998545687310234434214531112557
Q 005556          223 LSDLIKANLY---DVALNLLKNHPEI-------VHDIDSQ-KMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQ  291 (691)
Q Consensus       223 Lh~A~~~g~~---~iv~~Ll~~~~~l-------~~~~d~~-~tpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~  291 (691)
                      .+.+...+..   ..+..+.+.....       ....+.. .||||.++..++       ....+.++...         
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~~~~~~~-------~~~~~~~l~~~---------  210 (277)
T d2fo1e1         147 LMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSN-------MPIVKYLVGEK---------  210 (277)
T ss_dssp             HHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCC-------HHHHHHHHHHS---------
T ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-------CCCCCCCCCCC---------
T ss_conf             78887503433222221001123322222234555446689870000122333-------22222322234---------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             89999988998888876668888888889864211247884016999999854488999999999987762021006777
Q 005556          292 TNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLK  371 (691)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~  371 (691)
                                                                                         ..+.+..+ ..|+
T Consensus       211 -------------------------------------------------------------------~~~~~~~d-~~g~  222 (277)
T d2fo1e1         211 -------------------------------------------------------------------GSNKDKQD-EDGK  222 (277)
T ss_dssp             -------------------------------------------------------------------CCCTTCCC-TTCC
T ss_pred             -------------------------------------------------------------------CCCCCCCC-CCCC
T ss_conf             -------------------------------------------------------------------54333468-9999


Q ss_pred             HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCC
Q ss_conf             1899999819499999999977821011236997299999961993388987608
Q 005556          372 GALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGV  426 (691)
Q Consensus       372 tpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~Lh~Av~~~~~~iv~~Ll~~  426 (691)
                      ||||+|++.|+.++|+.|++.+++ ++.+|..|+||||+|+++|+.+++++|.++
T Consensus       223 tpL~~A~~~g~~~iv~~Ll~~gad-in~~d~~G~T~L~~A~~~~~~~iv~lL~~c  276 (277)
T d2fo1e1         223 TPIMLAAQEGRIEVVMYLIQQGAS-VEAVDATDHTARQLAQANNHHNIVDIFDRC  276 (277)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHTTCC-SSCCCSSSCCHHHHHHHTTCHHHHHHHHTT
T ss_pred             CHHHHHHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHHH
T ss_conf             899999985989999999987699-988699999999999985989999999971

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-34  Score=206.12  Aligned_cols=220  Identities=14%  Similarity=0.044  Sum_probs=150.5

Q ss_pred             CCCCHHHHCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCC
Q ss_conf             88650000001100222488898999999862588878664246799990887999719999999999709211102899
Q 005556          102 RSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTN  181 (691)
Q Consensus       102 ~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n  181 (691)
                      +|+||||+      ||..|  +.++++.|++.......+ ++.+|..|+||||+|+..|+.+++++|++.+++..  ...
T Consensus         2 dG~TpLh~------A~~~g--~~~~v~~Ll~~~~~~g~~-in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~--~~~   70 (228)
T d1k1aa_           2 DGDTPLHI------AVVQG--NLPAVHRLVNLFQQGGRE-LDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPM--ALD   70 (228)
T ss_dssp             TTCCHHHH------HHHTT--CHHHHHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT--CCC
T ss_pred             CCCCHHHH------HHHCC--CHHHHHHHHHHHHHCCCC-CCCCCCCCCCCCEEHHCCCCCCCCCCCCCCCCCCC--CCC
T ss_conf             88429999------99839--999999999989977997-77668999962410001355333333322222334--333


Q ss_pred             C-CCCHHHHHHHCCCHHHHHHHHHCCCCCC-CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH
Q ss_conf             9-9809999998199679999875099986-6545699978199999982949999999970999755779999988998
Q 005556          182 Q-NSLPVHLAALFGHKDTFEYLLEETPGRV-ENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSL  259 (691)
Q Consensus       182 ~-G~TpL~~Aa~~g~~~iv~~Ll~~~~~~~-~~~~~~~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~~tpLh~A  259 (691)
                      . |.++++.|...++.++++.+........ ..........++|+.+...........|.....+.....          
T Consensus        71 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~----------  140 (228)
T d1k1aa_          71 RHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVD----------  140 (228)
T ss_dssp             TTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC----------
T ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC----------
T ss_conf             3222333222223452100234420454322322333322222222222221001344300123322221----------


Q ss_pred             HCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             71998545687310234434214531112557899999889988888766688888888898642112478840169999
Q 005556          260 ALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIY  339 (691)
Q Consensus       260 a~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  339 (691)
                                                                                                      
T Consensus       141 --------------------------------------------------------------------------------  140 (228)
T d1k1aa_         141 --------------------------------------------------------------------------------  140 (228)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
T ss_conf             --------------------------------------------------------------------------------


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHH
Q ss_conf             99854488999999999987762021006777189999981949999999997782101123699729999996199338
Q 005556          340 AEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKV  419 (691)
Q Consensus       340 ~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~Lh~Av~~~~~~i  419 (691)
                                                 ...+.+|++.|+..+..++++.+++.+.. .+.+|..|+||||+|+.+|+.++
T Consensus       141 ---------------------------~~~~~~~l~~a~~~~~~~~~~~~~~~~~~-~~~~d~~g~t~L~~A~~~g~~~~  192 (228)
T d1k1aa_         141 ---------------------------IKSGRSPLIHAVENNSLSMVQLLLQHGAN-VNAQMYSGSSALHSASGRGLLPL  192 (228)
T ss_dssp             ---------------------------TTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHHTCHHH
T ss_pred             ---------------------------CCCHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCCCHHHHHHHCCCHHH
T ss_conf             ---------------------------00025578898875100234432220223-22212368616899998587999


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
Q ss_conf             8987608976654444458998242331015788
Q 005556          420 FNLIHGVNSSYFSISLEDKSGNNILHLTGKSEPS  453 (691)
Q Consensus       420 v~~Ll~~~~~~~~~n~~D~~G~TpLHlAa~~~~~  453 (691)
                      +++|++.|   +++|.+|.+|+||||+|++.++.
T Consensus       193 v~~Ll~~G---ad~n~~d~~G~TpL~~A~~~~~~  223 (228)
T d1k1aa_         193 VRTLVRSG---ADSSLKNCHNDTPLMVARSRRVI  223 (228)
T ss_dssp             HHHHHHTT---CCTTCCCTTSCCTTTTCSSHHHH
T ss_pred             HHHHHHCC---CCCCCCCCCCCCHHHHHHHCCCC
T ss_conf             99999878---99988789999999999868770

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-32  Score=197.82  Aligned_cols=248  Identities=15%  Similarity=0.136  Sum_probs=193.1

Q ss_pred             CCCCHHHHCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCC-CCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHCCC
Q ss_conf             88650000001100222488898999999862588878664246-79999088799971999999999970921110289
Q 005556          102 RSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCK-DGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQT  180 (691)
Q Consensus       102 ~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~-d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~  180 (691)
                      +++|+||.      |+..|  +.++|+.|++.|   ++  ++.+ +..|.||||+|+..|+.+++++|++.++...  ..
T Consensus         4 ~~~~~L~~------Ai~~~--~~e~vk~Ll~~G---~d--in~~~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~~--~~   68 (285)
T d1wdya_           4 EDNHLLIK------AVQNE--DVDLVQQLLEGG---AN--VNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPV--LR   68 (285)
T ss_dssp             HHHHHHHH------HHHTT--CHHHHHHHHHTT---CC--TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT--CC
T ss_pred             CCCHHHHH------HHHCC--CHHHHHHHHHCC---CC--CCCCCCCCCCCHHHHHHHCCCHHHHHHHCCCCCCCC--CC
T ss_conf             88489999------99829--999999999879---89--682489999799999998599988655202343222--22


Q ss_pred             CC-CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCC---------CC
Q ss_conf             99-980999999819967999987509998665456999781999999829499999999709997557---------79
Q 005556          181 NQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHD---------ID  250 (691)
Q Consensus       181 n~-G~TpL~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~l~~~---------~d  250 (691)
                      +. +.+|.+.|+..+..+...++++......   ..+..|.++++.|+..++...+..++....+....         .+
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (285)
T d1wdya_          69 KKNGATPFLLAAIAGSVKLLKLFLSKGADVN---ECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLR  145 (285)
T ss_dssp             CTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT---CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTT
T ss_pred             CCCCCHHHHHHHHCCCCCCCCHHHHHCCCCC---CCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHC
T ss_conf             2111114677764387532211343102210---1356898636788874001254454431001132321012222201


Q ss_pred             CC-CCHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99-99889987199854568731023443421453111255789999988998888876668888888889864211247
Q 005556          251 SQ-KMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYD  329 (691)
Q Consensus       251 ~~-~tpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (691)
                      .. .||||+|+..+       ...+++.++.+.-                                              
T Consensus       146 ~~g~t~L~~A~~~~-------~~~~~~~Ll~~~~----------------------------------------------  172 (285)
T d1wdya_         146 KGGATALMDAAEKG-------HVEVLKILLDEMG----------------------------------------------  172 (285)
T ss_dssp             CCCCCHHHHHHHHT-------CHHHHHHHHHTSC----------------------------------------------
T ss_pred             CCCCHHHHHHHHCC-------CHHHHHHHHHCCC----------------------------------------------
T ss_conf             46856999999868-------9999999984569----------------------------------------------


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH----HCCCHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             8840169999998544889999999999877620210067771899999----819499999999977821011236997
Q 005556          330 AKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTAT----RLGIPEFVNEFIMAYNYSALLLNSQNH  405 (691)
Q Consensus       330 ~~~~~~~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa----~~G~~eiv~~Ll~~~~~~~~~~d~~G~  405 (691)
                                                    .+++... ..+.++.+.+.    ..+..++++.|++.+.+ ++.+|..|+
T Consensus       173 ------------------------------~~i~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~-~n~~~~~g~  220 (285)
T d1wdya_         173 ------------------------------ADVNACD-NMGRNALIHALLSSDDSDVEAITHLLLDHGAD-VNVRGERGK  220 (285)
T ss_dssp             ------------------------------CCTTCCC-TTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCC-SSCCCTTSC
T ss_pred             ------------------------------CCCCCCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC-CCCCCCCCC
T ss_conf             ------------------------------8945546-78983322332234301799999999977999-886689999


Q ss_pred             CHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC
Q ss_conf             2999999619933889876089766544444589982423310157888
Q 005556          406 GIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHLTGKSEPSR  454 (691)
Q Consensus       406 t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~D~~G~TpLHlAa~~~~~~  454 (691)
                      ||||+|+++++.+++++|++..  ..++|.+|.+|+||||+|++.++.+
T Consensus       221 t~L~~a~~~~~~~~v~~lL~~~--g~din~~d~~G~TpL~~A~~~~~~e  267 (285)
T d1wdya_         221 TPLILAVEKKHLGLVQRLLEQE--HIEINDTDSDGKTALLLAVELKLKK  267 (285)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHSS--SCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred             CCCCHHHHCCCHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHHHCCCHH
T ss_conf             8241122138699999999808--9998687999989999999859799

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=100.00  E-value=1e-33  Score=203.55  Aligned_cols=243  Identities=15%  Similarity=0.146  Sum_probs=153.9

Q ss_pred             CCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCC-CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             999908879997199999999997092111028999-9809999998199679999875099986654569997819999
Q 005556          147 GGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSD  225 (691)
Q Consensus       147 ~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpL~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~  225 (691)
                      ..+.|||+.||..|+.++|++|+++++++.  .+|. |.||||+|+..|+.+++++|++.+.+...   .+..+.+||+.
T Consensus        38 ~~~~t~l~~A~~~G~~~~v~~Ll~~Gadvn--~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~~---~~~~~~~~L~~  112 (291)
T d1s70b_          38 FDDGAVFLAACSSGDTEEVLRLLERGADIN--YANVDGLTALHQACIDDNVDMVKFLVENGANINQ---PDNEGWIPLHA  112 (291)
T ss_dssp             ECHHHHHHHHHHHTCHHHHHHHHHHCCCTT--CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTC---CCTTSCCHHHH
T ss_pred             CCCCHHHHHHHHCCCHHHHHHHHHCCCCCC--CCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCC---CCCCCCCCCCC
T ss_conf             899669999998588999999998799988--6689999699999861973121100122233333---22232333333


Q ss_pred             HHHCCCHHHHHHHHHHCCCCCCCCCCC-CCHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             998294999999997099975577999-9988998719985456873102344342145311125578999998899888
Q 005556          226 LIKANLYDVALNLLKNHPEIVHDIDSQ-KMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTEN  304 (691)
Q Consensus       226 A~~~g~~~iv~~Ll~~~~~l~~~~d~~-~tpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~  304 (691)
                      |+..++.++++.|++.+..... .+.. .+|+++|+..+       ....+..++...                      
T Consensus       113 a~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~a~~~~-------~~~~~~~ll~~~----------------------  162 (291)
T d1s70b_         113 AASCGYLDIAEYLISQGAHVGA-VNSEGDTPLDIAEEEA-------MEELLQNEVNRQ----------------------  162 (291)
T ss_dssp             HHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHCCSHH-------HHHHHHHHHHHH----------------------
T ss_pred             CCCCCCCCHHHCCCCCCCCCCC-CCCCCCCCCCCCCCCC-------CCHHCCCCCCCC----------------------
T ss_conf             3222211001101246764222-2246764222211122-------200010000024----------------------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHH
Q ss_conf             88766688888888898642112478840169999998544889999999999877620210067771899999819499
Q 005556          305 GIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPE  384 (691)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~e  384 (691)
                                                                            ........ .....+.       . .
T Consensus       163 ------------------------------------------------------~~~~~~~~-~~~~~~~-------~-~  179 (291)
T d1s70b_         163 ------------------------------------------------------GVDIEAAR-KEEERIM-------L-R  179 (291)
T ss_dssp             ------------------------------------------------------TCCHHHHH-HHHHHHH-------H-H
T ss_pred             ------------------------------------------------------CCCCCCCC-CCCCCCC-------C-C
T ss_conf             ------------------------------------------------------65321100-0013332-------2-1


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf             99999997782101123699729999996199338898760897665444445899824233101578889886388638
Q 005556          385 FVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHLTGKSEPSRHVPGAALKMQ  464 (691)
Q Consensus       385 iv~~Ll~~~~~~~~~~d~~G~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~D~~G~TpLHlAa~~~~~~~v~~~~l~~~  464 (691)
                      .....+..........+..|.||||.|+..++.+++++|++.|   +++|.+|.+|.||||+|++.|+.++         
T Consensus       180 ~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g---~din~~~~~g~TpL~~A~~~g~~~i---------  247 (291)
T d1s70b_         180 DARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR---YDVNIKDYDGWTPLHAAAHWGKEEA---------  247 (291)
T ss_dssp             HHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTT---CCTTCCCTTCCCHHHHHHHTTCHHH---------
T ss_pred             CCHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHCCCCCCE---ECCCCCCCCCCCHHHHHHHCCCHHH---------
T ss_conf             1001101232110024678987304888769954410134410---1124212579889999998598999---------


Q ss_pred             HHHHHHHHHHHCC-CCHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf             9988898643207-801178742169992345258779989976
Q 005556          465 RELQWFKLAKNLV-HPQFREAENKLEQTPTEVFTKEHKELAKEG  507 (691)
Q Consensus       465 ~el~w~~~v~~~~-~~~~~~~~N~~G~Tp~di~~~~~~~l~~~~  507 (691)
                              |+.++ ....++.+|++|+||++++.+...+++.+-
T Consensus       248 --------v~lLl~~Gadv~~~d~~G~TaL~~A~e~~~~~L~~~  283 (291)
T d1s70b_         248 --------CRILVENLCDMEAVNKVGQTAFDVADEDILGYLEEL  283 (291)
T ss_dssp             --------HHHHHHTTCCTTCCCTTSCCTTTSCCSGGGHHHHHH
T ss_pred             --------HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             --------999998799998868999999999999899999998

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-34  Score=207.36  Aligned_cols=186  Identities=15%  Similarity=0.058  Sum_probs=113.4

Q ss_pred             CCCHHHHHHHHCCCHHHHH----HHHHCCCHHHHCCCCC-CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCH
Q ss_conf             9990887999719999999----9997092111028999-9809999998199679999875099986654569997819
Q 005556          148 GGNTVLSLCAIRGNLKASK----ILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRL  222 (691)
Q Consensus       148 ~G~TpLh~Aa~~G~~~ivk----~Ll~~~~~l~~~~~n~-G~TpL~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~  222 (691)
                      +|+||||+|+..|+.++++    .+...+.++  +.+|. |+||||+|+..|+.+++++|++.+.+..   .++.+|.||
T Consensus         1 dG~t~Lh~A~~~g~~~~~~~li~~~~~~~~~i--n~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~~---~~d~~g~t~   75 (221)
T d1iknd_           1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFL--NFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPE---LRDFRGNTP   75 (221)
T ss_dssp             CCCCTTHHHHHTTCSSSSSCCCC-----CCCC--CCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSC---CCCTTCCCH
T ss_pred             CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCC
T ss_conf             98729999998589999999999998679975--3678999954634334332223333222222222---232232222


Q ss_pred             HHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99999829499999999709997557799999889987199854568731023443421453111255789999988998
Q 005556          223 LSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDT  302 (691)
Q Consensus       223 Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~~tpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~  302 (691)
                      ||.|+..++.++++.|++............                                                  
T Consensus        76 l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--------------------------------------------------  105 (221)
T d1iknd_          76 LHLACEQGCLASVGVLTQSCTTPHLHSILK--------------------------------------------------  105 (221)
T ss_dssp             HHHHHHHTCHHHHHHHHHSTTTTSSSCGGG--------------------------------------------------
T ss_pred             CCCCCCCCCCCCCCHHHHHCCCCCCCCCCC--------------------------------------------------
T ss_conf             222333222221110111013233322222--------------------------------------------------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
Q ss_conf             88887666888888888986421124788401699999985448899999999998776202100677718999998194
Q 005556          303 ENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGI  382 (691)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~  382 (691)
                                                                                    .....|.||+|.|+..|+
T Consensus       106 --------------------------------------------------------------~~~~~~~t~l~~a~~~~~  123 (221)
T d1iknd_         106 --------------------------------------------------------------ATNYNGHTCLHLASIHGY  123 (221)
T ss_dssp             --------------------------------------------------------------CCCTTCCCHHHHHHHTTC
T ss_pred             --------------------------------------------------------------CCCCCCCHHHHHHHHCCC
T ss_conf             --------------------------------------------------------------223343213567755598


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
Q ss_conf             99999999977821011236997299999961993388987608976654444458998242331015788
Q 005556          383 PEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHLTGKSEPS  453 (691)
Q Consensus       383 ~eiv~~Ll~~~~~~~~~~d~~G~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~D~~G~TpLHlAa~~~~~  453 (691)
                      .++++.++..++......+..|+||||+|++.|+.+++++|++.|   ++++.+|.+|.||||+|+..++.
T Consensus       124 ~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~~v~~Ll~~g---ad~~~~~~~G~tpl~~A~~~~~~  191 (221)
T d1iknd_         124 LGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCG---ADVNRVTYQGYSPYQLTWGRPST  191 (221)
T ss_dssp             HHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTT---CCSCCCCTTCCCGGGGCTTSSCH
T ss_pred             HHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC---CCCCCCCCCCCCHHHHHHHCCCH
T ss_conf             223010013686311224467778431111222489888898638---86456699998999999987889

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-33  Score=199.61  Aligned_cols=198  Identities=14%  Similarity=0.090  Sum_probs=167.7

Q ss_pred             CCCCHHHHCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCC
Q ss_conf             88650000001100222488898999999862588878664246799990887999719999999999709211102899
Q 005556          102 RSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTN  181 (691)
Q Consensus       102 ~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n  181 (691)
                      +|+||||+      |+..|  +.++++.|++.......+ ++.+|..|+||||+|+..|+.+++++|++.+++..  .+|
T Consensus         1 dG~t~Lh~------A~~~g--~~~~~~~li~~~~~~~~~-in~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~~--~~d   69 (221)
T d1iknd_           1 DGDSFLHL------AIIHE--EKALTMEVIRQVKGDLAF-LNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPE--LRD   69 (221)
T ss_dssp             CCCCTTHH------HHHTT--CSSSSSCCCC-----CCC-CCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSC--CCC
T ss_pred             CCCHHHHH------HHHCC--CHHHHHHHHHHHHHCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCC
T ss_conf             98729999------99858--999999999999867997-53678999954634334332223333222222222--232


Q ss_pred             C-CCCHHHHHHHCCCHHHHHHHHHCCCCCC---CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHH
Q ss_conf             9-9809999998199679999875099986---65456999781999999829499999999709997557799999889
Q 005556          182 Q-NSLPVHLAALFGHKDTFEYLLEETPGRV---ENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHDIDSQKMALD  257 (691)
Q Consensus       182 ~-G~TpL~~Aa~~g~~~iv~~Ll~~~~~~~---~~~~~~~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~~tpLh  257 (691)
                      . |.|||++|+..|+.++++.|+..+....   .......+|.|+||.|+..++.+.+..++..++......+       
T Consensus        70 ~~g~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~-------  142 (221)
T d1iknd_          70 FRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEP-------  142 (221)
T ss_dssp             TTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT-------
T ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHEEEECCCCCCCCCCCC-------
T ss_conf             2322222223332222211101110132333222222233432135677555982230100136863112244-------


Q ss_pred             HHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             98719985456873102344342145311125578999998899888887666888888888986421124788401699
Q 005556          258 SLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKA  337 (691)
Q Consensus       258 ~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (691)
                                                                                                      
T Consensus       143 --------------------------------------------------------------------------------  142 (221)
T d1iknd_         143 --------------------------------------------------------------------------------  142 (221)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
T ss_conf             --------------------------------------------------------------------------------


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCH
Q ss_conf             99998544889999999999877620210067771899999819499999999977821011236997299999961993
Q 005556          338 IYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRRE  417 (691)
Q Consensus       338 i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~Lh~Av~~~~~  417 (691)
                                                    ..|.||||.|++.|+.+++++|++.+++ ++.+|.+|+||||+|+.+++.
T Consensus       143 ------------------------------~~G~T~L~~A~~~g~~~~v~~Ll~~gad-~~~~~~~G~tpl~~A~~~~~~  191 (221)
T d1iknd_         143 ------------------------------CNGRTALHLAVDLQNPDLVSLLLKCGAD-VNRVTYQGYSPYQLTWGRPST  191 (221)
T ss_dssp             ------------------------------TTCCCHHHHHHHTTCHHHHHHHHTTTCC-SCCCCTTCCCGGGGCTTSSCH
T ss_pred             ------------------------------CCCCCCCCCCCCCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHCCCH
T ss_conf             ------------------------------6777843111122248988889863886-456699998999999987889


Q ss_pred             HHHHHHHCCCC
Q ss_conf             38898760897
Q 005556          418 KVFNLIHGVNS  428 (691)
Q Consensus       418 ~iv~~Ll~~~~  428 (691)
                      +++++|++...
T Consensus       192 ~~~~~l~~~~~  202 (221)
T d1iknd_         192 RIQQQLGQLTL  202 (221)
T ss_dssp             HHHHHHHTTSC
T ss_pred             HHHHHHHHCCC
T ss_conf             99999998287

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=100.00  E-value=5.3e-36  Score=216.47  Aligned_cols=239  Identities=12%  Similarity=0.063  Sum_probs=163.8

Q ss_pred             CCCCCCHHHHCCCCCCHHCCCCCCHHHHHH---HHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHH
Q ss_conf             898865000000110022248889899999---98625888786642467999908879997199999999997092111
Q 005556          100 LGRSLTIFHLIMGLLVDVETDDEATDLIDK---LAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELL  176 (691)
Q Consensus       100 ~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~---Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~  176 (691)
                      +..|.||||+      ||..|  |.++++.   |++.+   ..  ++.+|..|+||||+||+.||.++|++|++.+++..
T Consensus        87 ~~~~~t~L~~------Aa~~g--~~~~~~~~~~L~~~~---~~--in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~  153 (346)
T d2ajaa1          87 GIKSEVICFV------AAITG--CSSALDTLCLLLTSD---EI--VKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEI  153 (346)
T ss_dssp             TCCHHHHHHH------HHHHC--CHHHHHHHTTC--CC---SS--CC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTH
T ss_pred             CCCCCCHHHH------HHHHC--CHHHHHHHHHHHHCC---CC--CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC
T ss_conf             6788849999------99859--988999999998389---85--53368999979999998789999999998699702


Q ss_pred             HCCCCC-CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCC------C
Q ss_conf             028999-980999999819967999987509998665456999781999999829499999999709997557------7
Q 005556          177 IKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVHD------I  249 (691)
Q Consensus       177 ~~~~n~-G~TpL~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~l~~~------~  249 (691)
                      ....+. |.||||+||..||.++|++|++.++........+.+|.|++|.|+.+|+.+++++|++.+++....      .
T Consensus       154 ~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~  233 (346)
T d2ajaa1         154 MAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEY  233 (346)
T ss_dssp             HHHHSHHHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHHHHHHHHCTTTT
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHC
T ss_conf             14555699874389988756799999997699420120016899631157762488999999996899866377999875


Q ss_pred             CCC-CCHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             999-9988998719985456873102344342145311125578999998899888887666888888888986421124
Q 005556          250 DSQ-KMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTY  328 (691)
Q Consensus       250 d~~-~tpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (691)
                      ... .++++.....+              ...    .......                   ....+..+          
T Consensus       234 ~~~~~~~~~~~~~~~--------------~~~----~~~~l~~-------------------a~~~~~~~----------  266 (346)
T d2ajaa1         234 GEKYVNPFIARHVNR--------------LKE----MHDAFKL-------------------SNPDGVFD----------  266 (346)
T ss_dssp             TTTTHHHHHHHHHHH--------------HHH----HHTTTTT-------------------TSSSSCCC----------
T ss_pred             CCHHHHHHHHHHHCC--------------CHH----HHHHHHH-------------------HCCCCCHH----------
T ss_conf             947666889976304--------------437----8999997-------------------36265676----------


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHCCCC----CCCCCCCC
Q ss_conf             78840169999998544889999999999877620210067771899999819499999999977821----01123699
Q 005556          329 DAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEFIMAYNYS----ALLLNSQN  404 (691)
Q Consensus       329 ~~~~~~~~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~Ll~~~~~~----~~~~d~~G  404 (691)
                         .  .        .......            .    ..+.++++.|+..|+.+++++|++.+...    ....+.+|
T Consensus       267 ---~--~--------~~~~~~~------------~----~~~~~~l~~a~~~~~ld~v~~Ll~~~~~~~~~~~~~~~~~g  317 (346)
T d2ajaa1         267 ---L--V--------TKSECLQ------------G----FYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDA  317 (346)
T ss_dssp             ---C--S--------SHHHHHH------------H----HHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCC
T ss_pred             ---H--H--------HCCCCCC------------C----CHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCCCCCCCCC
T ss_conf             ---7--7--------3333235------------6----24422999986179599999998686755536445679999


Q ss_pred             CCHHHHHHHCCCHHHHHHHHCCC
Q ss_conf             72999999619933889876089
Q 005556          405 HGIFELAVLHRREKVFNLIHGVN  427 (691)
Q Consensus       405 ~t~Lh~Av~~~~~~iv~~Ll~~~  427 (691)
                      +||||+|++.|+.+++++|++.+
T Consensus       318 ~T~LhlA~~~Gn~e~v~lLL~~p  340 (346)
T d2ajaa1         318 NELLRLALRLGNQGACALLLSIP  340 (346)
T ss_dssp             CHHHHHHHHHTCTTHHHHHTTSH
T ss_pred             CCHHHHHHHCCCHHHHHHHHCCC
T ss_conf             81999999848199999985899

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.97  E-value=1.5e-29  Score=180.23  Aligned_cols=79  Identities=14%  Similarity=-0.010  Sum_probs=47.4

Q ss_pred             CCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHC
Q ss_conf             77189999981949999999997782101123699729999996199338898760897665444445899824233101
Q 005556          370 LKGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHLTGK  449 (691)
Q Consensus       370 g~tpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~D~~G~TpLHlAa~  449 (691)
                      |.||++.++..|..++++.+++.+.+ .+..|..|.||||+|+.+|+.+++++|++.|   ++++.+|..|+||||+|++
T Consensus       123 ~~t~l~~~~~~~~~~~~~~l~~~~~~-~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~g---ad~n~~d~~g~Tpl~~A~~  198 (209)
T d1ot8a_         123 GKTALHWAAAVNNTEAVNILLMHHAN-RDAQDDKDETPLFLAAREGSYEASKALLDNF---ANREITDHMDRLPRDVASE  198 (209)
T ss_dssp             SCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHH
T ss_pred             CCCCCHHHCCCCCCEEEEEECCCCCC-CCCCCCCCCCCCCHHCCCCHHHHHHHHHHCC---CCCCCCCCCCCCHHHHHHH
T ss_conf             99823000036863145320122223-4544344455211210324999999999879---9998868999999999998


Q ss_pred             CCC
Q ss_conf             578
Q 005556          450 SEP  452 (691)
Q Consensus       450 ~~~  452 (691)
                      .|+
T Consensus       199 ~~~  201 (209)
T d1ot8a_         199 RLH  201 (209)
T ss_dssp             TTC
T ss_pred             CCC
T ss_conf             687

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.97  E-value=1.6e-33  Score=202.52  Aligned_cols=268  Identities=10%  Similarity=-0.016  Sum_probs=173.5

Q ss_pred             CCCCCCHHHHCCCCCCHHCCCCCCHHHHHHHHHCCCC-CCCC-----CCCCCCCCCCHHHHHHHHCCCHHHHHH---HHH
Q ss_conf             8988650000001100222488898999999862588-8786-----642467999908879997199999999---997
Q 005556          100 LGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDV-DISE-----TLSCKDGGGNTVLSLCAIRGNLKASKI---LVK  170 (691)
Q Consensus       100 ~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~-~~~~-----~l~~~d~~G~TpLh~Aa~~G~~~ivk~---Ll~  170 (691)
                      +....+.++.      +...+  ..++.+.+...+.. ....     .++.++..|.||||+||..|+.+++++   |++
T Consensus        43 ~~~~~~~~~~------~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~  114 (346)
T d2ajaa1          43 SYKEAIHIFL------PGTKN--MEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLT  114 (346)
T ss_dssp             CHHHHHHHCC------CCSSH--HHHHHHHHHHHHHHTTTTCTTHHHHHHHHTCCHHHHHHHHHHHCCHHHHHHHTTC--
T ss_pred             CCCHHHHHHH------HHHCC--HHHHHHHHHHCCHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHH
T ss_conf             1302789988------86543--799999999750022001143212787636788849999998599889999999983


Q ss_pred             CCCHHHHCCCCC-CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCC--
Q ss_conf             092111028999-98099999981996799998750999866545699978199999982949999999970999755--
Q 005556          171 HKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIVH--  247 (691)
Q Consensus       171 ~~~~l~~~~~n~-G~TpL~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~l~~--  247 (691)
                      .++++.  .++. |.||||+||..||.++|++|++.+++.... ..+.+|.||||+|+.+|+.+++++|++.++....  
T Consensus       115 ~~~~in--~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~-~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~  191 (346)
T d2ajaa1         115 SDEIVK--VIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMA-MIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAM  191 (346)
T ss_dssp             CCSSCC----CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHH-HHSHHHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHH
T ss_pred             CCCCCC--CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             898553--36899997999999878999999999869970214-555699874389988756799999997699420120


Q ss_pred             CCCCC-CCHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             77999-99889987199854568731023443421453111255789999988998888876668888888889864211
Q 005556          248 DIDSQ-KMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQIT  326 (691)
Q Consensus       248 ~~d~~-~tpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (691)
                      ..+.+ .||++.|+..       ++.++++.++.....+....                                     
T Consensus       192 ~~~~~~~t~l~~A~~~-------g~~~iv~~Ll~~ga~~~~~~-------------------------------------  227 (346)
T d2ajaa1         192 IQAENYYAFRWAAVGR-------GHHNVINFLLDCPVMLAYAE-------------------------------------  227 (346)
T ss_dssp             HHHHHHHHHHHHHSTT-------CCHHHHHHHTTSHHHHHHHH-------------------------------------
T ss_pred             CCCCCCCCHHHHHHHC-------CHHHHHHHHHHCCCCCCHHH-------------------------------------
T ss_conf             0168996311577624-------88999999996899866377-------------------------------------


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCC-CC------
Q ss_conf             24788401699999985448899999999998776202100677718999998194999999999778210-11------
Q 005556          327 TYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEFIMAYNYSA-LL------  399 (691)
Q Consensus       327 ~~~~~~~~~~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~Ll~~~~~~~-~~------  399 (691)
                                 ..+...+                       ..+.++++.++..+..+....+....++.. +.      
T Consensus       228 -----------~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~  273 (346)
T d2ajaa1         228 -----------IHEFEYG-----------------------EKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSEC  273 (346)
T ss_dssp             -----------HCTTTTT-----------------------TTTHHHHHHHHHHHHHHHHTTTTTTSSSSCCCCSSHHHH
T ss_pred             -----------HHHHHCC-----------------------CHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHCCCC
T ss_conf             -----------9998759-----------------------476668899763044378999997362656767733332


Q ss_pred             -CCCCCCCHHHHHHHCCCHHHHHHHHCCCC--CCCCCCCCCCCCCCHHHHHHCCCCCCCC
Q ss_conf             -23699729999996199338898760897--6654444458998242331015788898
Q 005556          400 -LNSQNHGIFELAVLHRREKVFNLIHGVNS--SYFSISLEDKSGNNILHLTGKSEPSRHV  456 (691)
Q Consensus       400 -~d~~G~t~Lh~Av~~~~~~iv~~Ll~~~~--~~~~~n~~D~~G~TpLHlAa~~~~~~~v  456 (691)
                       ....+.++++.|+..++.+++++|++.+.  .....+..+.+|+||||+|++.|+.+.+
T Consensus       274 ~~~~~~~~~l~~a~~~~~ld~v~~Ll~~~~~~~~~~~~~~~~~g~T~LhlA~~~Gn~e~v  333 (346)
T d2ajaa1         274 LQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGAC  333 (346)
T ss_dssp             HHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHH
T ss_pred             CCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHCCCHHHH
T ss_conf             356244229999861795999999986867555364456799998199999984819999

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.97  E-value=1.7e-28  Score=174.23  Aligned_cols=205  Identities=17%  Similarity=0.199  Sum_probs=141.6

Q ss_pred             HHHHHHHHCCHHHHHCCCCCCCCCCHHHHCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCC
Q ss_conf             99999982090111002678988650000001100222488898999999862588878664246799990887999719
Q 005556           81 QSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRG  160 (691)
Q Consensus        81 ~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G  160 (691)
                      ++|+.|++.+++. +.+ .|.+|.||||+      ||..|  +.++++.|++.+   ..  ++.++..+.++++.++..+
T Consensus         3 ~~v~~Ll~~g~di-n~~-~d~~G~t~L~~------A~~~g--~~e~v~~Ll~~g---~~--~n~~~~~~~~~~~~~~~~~   67 (209)
T d1ot8a_           3 QVISDLLAQGAEL-NAT-MDKTGETSLHL------AARFA--RADAAKRLLDAG---AD--ANSQDNTGRTPLHAAVAAD   67 (209)
T ss_dssp             HHHHHHHHHHHHH-HHH-HHHHCCCHHHH------HHHTT--CHHHHHHHHHTT---CC--TTCCCTTSCCHHHHHHHTT
T ss_pred             HHHHHHHHCCCCC-CCC-CCCCCCCHHHH------HHHCC--CHHHHHHHHHHC---CC--CCCCCCCCCCCCCCCCCCC
T ss_conf             9999999878986-867-69999889999------99839--999999987502---23--3222222222222222222


Q ss_pred             CHHHHHHHHHCCCHHHHCCCCC-CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
Q ss_conf             9999999997092111028999-980999999819967999987509998665456999781999999829499999999
Q 005556          161 NLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLL  239 (691)
Q Consensus       161 ~~~ivk~Ll~~~~~l~~~~~n~-G~TpL~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~A~~~g~~~iv~~Ll  239 (691)
                      +............... ..... |.++.+.+.........+.|.+.+.+...   .+..|.|+|+.++..+..++++.++
T Consensus        68 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~---~~~~~~t~l~~~~~~~~~~~~~~l~  143 (209)
T d1ot8a_          68 AMGVFQILLRNRATNL-NARMHDGTTPLILAARLAIEGMVEDLITADADINA---ADNSGKTALHWAAAVNNTEAVNILL  143 (209)
T ss_dssp             CHHHHHHHHTCTTCCT-TCCCTTCCCHHHHHHHTTCTTHHHHHHHTTCCTTC---BCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC---CCCCCCCCCHHHCCCCCCEEEEEEC
T ss_conf             2222222222222223-22222233322222222101235555310146555---5779998230000368631453201


Q ss_pred             HHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             70999755779999988998719985456873102344342145311125578999998899888887666888888888
Q 005556          240 KNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPY  319 (691)
Q Consensus       240 ~~~~~l~~~~d~~~tpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (691)
                      +.+.+.... |                                                                     
T Consensus       144 ~~~~~~~~~-d---------------------------------------------------------------------  153 (209)
T d1ot8a_         144 MHHANRDAQ-D---------------------------------------------------------------------  153 (209)
T ss_dssp             HTTCCTTCC-C---------------------------------------------------------------------
T ss_pred             CCCCCCCCC-C---------------------------------------------------------------------
T ss_conf             222234544-3---------------------------------------------------------------------


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCC
Q ss_conf             98642112478840169999998544889999999999877620210067771899999819499999999977821011
Q 005556          320 GSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEFIMAYNYSALL  399 (691)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~Ll~~~~~~~~~  399 (691)
                                                                      ..|.||||.|+..|+.++|+.|++.+++ ++.
T Consensus       154 ------------------------------------------------~~g~TpL~~A~~~g~~~~v~~Ll~~gad-~n~  184 (209)
T d1ot8a_         154 ------------------------------------------------DKDETPLFLAAREGSYEASKALLDNFAN-REI  184 (209)
T ss_dssp             ------------------------------------------------TTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTC
T ss_pred             ------------------------------------------------CCCCCCCCHHCCCCHHHHHHHHHHCCCC-CCC
T ss_conf             ------------------------------------------------4445521121032499999999987999-988


Q ss_pred             CCCCCCCHHHHHHHCCCHHHHHHH
Q ss_conf             236997299999961993388987
Q 005556          400 LNSQNHGIFELAVLHRREKVFNLI  423 (691)
Q Consensus       400 ~d~~G~t~Lh~Av~~~~~~iv~~L  423 (691)
                      .|..|+||||+|+++|+.+++++|
T Consensus       185 ~d~~g~Tpl~~A~~~~~~~iv~lL  208 (209)
T d1ot8a_         185 TDHMDRLPRDVASERLHHDIVRLL  208 (209)
T ss_dssp             CCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             CCCCCCCHHHHHHHCCCHHHHHHC
T ss_conf             689999999999986879899643

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=2e-29  Score=179.49  Aligned_cols=176  Identities=15%  Similarity=0.093  Sum_probs=118.6

Q ss_pred             CCCC-CCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCC-CCCHHHHHHHCCC-------HHHHHHHHHCCCCCCCC
Q ss_conf             4246-7999908879997199999999997092111028999-9809999998199-------67999987509998665
Q 005556          142 LSCK-DGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGH-------KDTFEYLLEETPGRVEN  212 (691)
Q Consensus       142 l~~~-d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpL~~Aa~~g~-------~~iv~~Ll~~~~~~~~~  212 (691)
                      ++.. |..|+||||+||..|+.++|++|++.++++.  .+|. |+||||.||..++       .++++++...      .
T Consensus        99 vn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~~--~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~~------~  170 (301)
T d1sw6a_          99 LNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRL--YGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPC------L  170 (301)
T ss_dssp             SCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT--BCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGG------G
T ss_pred             CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC--CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH------H
T ss_conf             686868999888999998679999999998789977--67764351777742202202466699999997645------5


Q ss_pred             CCCCCCCCCHHHHHHHCCC----HHHHHH--------HHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHH
Q ss_conf             4569997819999998294----999999--------9970999755779999988998719985456873102344342
Q 005556          213 FYCGGDGGRLLSDLIKANL----YDVALN--------LLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIY  280 (691)
Q Consensus       213 ~~~~~~G~t~Lh~A~~~g~----~~iv~~--------Ll~~~~~l~~~~d~~~tpLh~Aa~~~~~f~s~~~l~~~~~li~  280 (691)
                      ...+..|+|+||.++..+.    ...++.        +++............                            
T Consensus       171 ~~~d~~g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----------------------------  222 (301)
T d1sw6a_         171 ILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNE----------------------------  222 (301)
T ss_dssp             GEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-------------------------------
T ss_pred             HHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCC----------------------------
T ss_conf             5134532778799999837554189999989999999986587200002456----------------------------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             14531112557899999889988888766688888888898642112478840169999998544889999999999877
Q 005556          281 KCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVI  360 (691)
Q Consensus       281 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lL~~l~~~~~  360 (691)
                                                                                                      
T Consensus       223 --------------------------------------------------------------------------------  222 (301)
T d1sw6a_         223 --------------------------------------------------------------------------------  222 (301)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
T ss_conf             --------------------------------------------------------------------------------


Q ss_pred             HHHHHHCCCCCHHHHHHHHCCCHHH-----HHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCC
Q ss_conf             6202100677718999998194999-----99999977821011236997299999961993388987608976654444
Q 005556          361 WTNRANRNKLKGALFTATRLGIPEF-----VNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISL  435 (691)
Q Consensus       361 ~~~~~~~~~g~tpLh~Aa~~G~~ei-----v~~Ll~~~~~~~~~~d~~G~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~  435 (691)
                               +.++++.+........     +..++..   .++.+|..|+||||+|+++|+.+++++|++.|   ++++.
T Consensus       223 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~G---Ad~~~  287 (301)
T d1sw6a_         223 ---------KESKPNDKNGERKDSILENLDLKWIIAN---MLNAQDSNGDTCLNIAARLGNISIVDALLDYG---ADPFI  287 (301)
T ss_dssp             ----------------------CHHHHHCSHHHHHHH---TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTT---CCTTC
T ss_pred             ---------CCCHHHHHHHCCHHHHHHHHHHHHHHHC---CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC---CCCCC
T ss_conf             ---------6404689886014889999866778860---76687899988999999868799999999879---99999


Q ss_pred             CCCCCCCHHHHHH
Q ss_conf             4589982423310
Q 005556          436 EDKSGNNILHLTG  448 (691)
Q Consensus       436 ~D~~G~TpLHlAa  448 (691)
                      +|+.|.||||+|+
T Consensus       288 ~n~~G~Tpl~~A~  300 (301)
T d1sw6a_         288 ANKSGLRPVDFGA  300 (301)
T ss_dssp             CCTTSCCGGGGTC
T ss_pred             CCCCCCCHHHHCC
T ss_conf             8999999999737

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.3e-28  Score=174.84  Aligned_cols=159  Identities=18%  Similarity=0.113  Sum_probs=78.7

Q ss_pred             CCHHHHHHHHCCCHHHHHHHHHC---CHHHHHCCCCCCCCCCHHHHCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf             21999999990999999999820---901110026789886500000011002224888989999998625888786642
Q 005556           67 RHLELYRMIQMNDWQSVDGFVQS---NTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLS  143 (691)
Q Consensus        67 ~~~~L~~A~~~G~~~~v~~ll~~---~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~  143 (691)
                      +.||||.|+..|+.+.++.|++.   .+..++.+  +..|.||||+      |+..|  +.++++.|++.+   ..  .+
T Consensus         3 G~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~in~~--d~~g~TpL~~------A~~~~--~~~iv~~Ll~~g---a~--~~   67 (228)
T d1k1aa_           3 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIY--NNLRQTPLHL------AVITT--LPSVVRLLVTAG---AS--PM   67 (228)
T ss_dssp             TCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCC--CTTSCCHHHH------HHHTT--CHHHHHHHHHTT---CC--TT
T ss_pred             CCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC--CCCCCCCCEE------HHCCC--CCCCCCCCCCCC---CC--CC
T ss_conf             8429999998399999999999899779977766--8999962410------00135--533333332222---23--34


Q ss_pred             CCCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHH--HCCCCC-CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             467999908879997199999999997092111--028999-98099999981996799998750999866545699978
Q 005556          144 CKDGGGNTVLSLCAIRGNLKASKILVKHKHELL--IKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGG  220 (691)
Q Consensus       144 ~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~--~~~~n~-G~TpL~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~  220 (691)
                      ..+..|.++++.|...++.++++.+........  ...... ..+||+.+.........+.|.........  .....|.
T Consensus        68 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~  145 (228)
T d1k1aa_          68 ALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDA--VDIKSGR  145 (228)
T ss_dssp             CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC--CCTTTCC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC--CCCCCHH
T ss_conf             33332223332222234521002344204543223223333222222222222210013443001233222--2100025


Q ss_pred             CHHHHHHHCCCHHHHHHHHHHC
Q ss_conf             1999999829499999999709
Q 005556          221 RLLSDLIKANLYDVALNLLKNH  242 (691)
Q Consensus       221 t~Lh~A~~~g~~~iv~~Ll~~~  242 (691)
                      ++|+.|+..+...+++.+++.+
T Consensus       146 ~~l~~a~~~~~~~~~~~~~~~~  167 (228)
T d1k1aa_         146 SPLIHAVENNSLSMVQLLLQHG  167 (228)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHC
T ss_conf             5788988751002344322202

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.6e-26  Score=163.21  Aligned_cols=151  Identities=19%  Similarity=0.163  Sum_probs=134.2

Q ss_pred             HHHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             99999999099999999982090111002678988650000001100222488898999999862588878664246799
Q 005556           69 LELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGG  148 (691)
Q Consensus        69 ~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~  148 (691)
                      ..|+.|+..|+.+.|+.++++.+..++.+  |..|+||||+      |+. |  +.++++.|++.+   .+  ++.++..
T Consensus         4 ~~L~~Aa~~g~~~~vk~lL~~~~~~~n~~--d~~g~t~L~~------A~~-~--~~~~v~~Ll~~~---~~--~~~~~~~   67 (156)
T d1bd8a_           4 DRLSGAAARGDVQEVRRLLHRELVHPDAL--NRFGKTALQV------MMF-G--STAIALELLKQG---AS--PNVQDTS   67 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHTTCCCTTCC--CTTSCCHHHH------SCT-T--CHHHHHHHHHTT---CC--TTCCCTT
T ss_pred             HHHHHHHHCCCHHHHHHHHHHCCCCCCCC--CCCCCCCCCC------CCC-C--CCCCCCCCCCCC---CC--CCCCCCC
T ss_conf             79999999589999999999589998864--8999841334------322-2--222222222222---22--2222222


Q ss_pred             CCHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCC-CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             9908879997199999999997092111028999-980999999819967999987509998665456999781999999
Q 005556          149 GNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLI  227 (691)
Q Consensus       149 G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpL~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~A~  227 (691)
                      |.+|++.++..++.++++.+++.++++.  .++. |.||||+|+..|+.+++++|+. +.+.   +.++.+|.||||+|+
T Consensus        68 ~~~~l~~~~~~~~~~~~~~~l~~~~~~n--~~~~~~~t~L~~A~~~~~~~i~~~L~~-~~~~---~~~d~~G~TpL~~A~  141 (156)
T d1bd8a_          68 GTSPVHDAARTGFLDTLKVLVEHGADVN--VPDGTGALPIHLAVQEGHTAVVSFLAA-ESDL---HRRDARGLTPLELAL  141 (156)
T ss_dssp             SCCHHHHHHHTTCHHHHHHHHHTTCCSC--CCCTTSCCHHHHHHHHTCHHHHHHHHT-TSCT---TCCCTTSCCHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCEEECCCCCCCCCCCCCCCCC-CCCC---CCCCCCCCCHHHHHH
T ss_conf             2222222222222222222222212211--236778722212222332222111122-2566---466899999999999


Q ss_pred             HCCCHHHHHHHHHH
Q ss_conf             82949999999970
Q 005556          228 KANLYDVALNLLKN  241 (691)
Q Consensus       228 ~~g~~~iv~~Ll~~  241 (691)
                      ..|+.++++.|+++
T Consensus       142 ~~g~~~iv~~Ll~h  155 (156)
T d1bd8a_         142 QRGAQDLVDILQGH  155 (156)
T ss_dssp             HSCCHHHHHHHHTT
T ss_pred             HCCCHHHHHHHHHH
T ss_conf             85989999999966

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.4e-26  Score=163.48  Aligned_cols=153  Identities=20%  Similarity=0.213  Sum_probs=90.6

Q ss_pred             HHHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             99999999099999999982090111002678988650000001100222488898999999862588878664246799
Q 005556           69 LELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGG  148 (691)
Q Consensus        69 ~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~  148 (691)
                      ++||.|+..|+.+.|+.|++.+.+ ++.+  +..|.||||+      |+ .|  +.++++.|++.+   .+  ++.++..
T Consensus         3 ~~Lh~Aa~~g~~~~v~~Ll~~g~d-~n~~--d~~g~TpL~~------A~-~~--~~ei~~~Ll~~~---a~--~~~~~~~   65 (156)
T d1ihba_           3 NELASAAARGDLEQLTSLLQNNVN-VNAQ--NGFGRTALQV------MK-LG--NPEIARRLLLRG---AN--PDLKDRT   65 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHTTSCCC-TTCC--CTTSCCHHHH------CC-SS--CHHHHHHHHHTT---CC--TTCCCTT
T ss_pred             HHHHHHHHCCCHHHHHHHHHCCCC-CCCC--CCCCCCCCCC------CC-CC--CCCCCCCCCCCC---CC--CCCCCCC
T ss_conf             899999986799999999987879-6746--7744532122------22-22--222222222222---22--2121235


Q ss_pred             CCHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCC-CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             9908879997199999999997092111028999-980999999819967999987509998665456999781999999
Q 005556          149 GNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLI  227 (691)
Q Consensus       149 G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpL~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~A~  227 (691)
                      |.++|+.++..|+.+.++.+++.+.+..  ..+. |.+|+|+|+..++.+++++|+++++...  ..++.+|.||||+|+
T Consensus        66 ~~~~l~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~--~~~d~~g~TpL~~A~  141 (156)
T d1ihba_          66 GFAVIHDAARAGFLDTLQTLLEFQADVN--IEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNV--GHRNHKGDTACDLAR  141 (156)
T ss_dssp             SCCHHHHHHHHTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCT--TCCCTTSCCHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCHHHHHH
T ss_conf             7532223322222222222211222222--356443211223333221222222221220112--245899989999999


Q ss_pred             HCCCHHHHHHHHHHC
Q ss_conf             829499999999709
Q 005556          228 KANLYDVALNLLKNH  242 (691)
Q Consensus       228 ~~g~~~iv~~Ll~~~  242 (691)
                      ..++.+++++|+++|
T Consensus       142 ~~~~~~iv~~Ll~~G  156 (156)
T d1ihba_         142 LYGRNEVVSLMQANG  156 (156)
T ss_dssp             HTTCHHHHHHHHHTC
T ss_pred             HCCCHHHHHHHHHCC
T ss_conf             839899999999667

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.2e-25  Score=156.70  Aligned_cols=153  Identities=19%  Similarity=0.211  Sum_probs=113.4

Q ss_pred             HHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCC-CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHC
Q ss_conf             08879997199999999997092111028999-98099999981996799998750999866545699978199999982
Q 005556          151 TVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKA  229 (691)
Q Consensus       151 TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpL~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~A~~~  229 (691)
                      +|||+||..|+.++++.|+++++++.  .+|. |.||||+|+ .|+.+++++|++.+.+..   ..+.+|.++++.++..
T Consensus         3 ~~Lh~Aa~~g~~~~v~~Ll~~g~d~n--~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~~---~~~~~~~~~l~~~~~~   76 (156)
T d1ihba_           3 NELASAAARGDLEQLTSLLQNNVNVN--AQNGFGRTALQVMK-LGNPEIARRLLLRGANPD---LKDRTGFAVIHDAARA   76 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHTTSCCCTT--CCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHH
T ss_pred             HHHHHHHHCCCHHHHHHHHHCCCCCC--CCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCC
T ss_conf             89999998679999999998787967--46774453212222-222222222222222221---2123575322233222


Q ss_pred             CCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             94999999997099975577999998899871998545687310234434214531112557899999889988888766
Q 005556          230 NLYDVALNLLKNHPEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTT  309 (691)
Q Consensus       230 g~~~iv~~Ll~~~~~l~~~~d~~~tpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~  309 (691)
                      +..+.+..|++.+.+.... +                                                           
T Consensus        77 ~~~~~~~~l~~~~~~~~~~-~-----------------------------------------------------------   96 (156)
T d1ihba_          77 GFLDTLQTLLEFQADVNIE-D-----------------------------------------------------------   96 (156)
T ss_dssp             TCHHHHHHHHHTTCCTTCC-C-----------------------------------------------------------
T ss_pred             CCCCCCCCCCCCCCCCCCC-C-----------------------------------------------------------
T ss_conf             2222222221122222235-6-----------------------------------------------------------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHH
Q ss_conf             68888888889864211247884016999999854488999999999987762021006777189999981949999999
Q 005556          310 NGHSKKSIPYGSTQQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEF  389 (691)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~L  389 (691)
                                                                                ..|.+|+|.|+..|+.++++.|
T Consensus        97 ----------------------------------------------------------~~~~~~l~~a~~~~~~~~~~~L  118 (156)
T d1ihba_          97 ----------------------------------------------------------NEGNLPLHLAAKEGHLRVVEFL  118 (156)
T ss_dssp             ----------------------------------------------------------TTSCCHHHHHHHTTCHHHHHHH
T ss_pred             ----------------------------------------------------------CCCCCCCCCCCCCCCCCCCCCC
T ss_conf             ----------------------------------------------------------4432112233332212222222


Q ss_pred             HHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCC
Q ss_conf             99778210112369972999999619933889876089
Q 005556          390 IMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVN  427 (691)
Q Consensus       390 l~~~~~~~~~~d~~G~t~Lh~Av~~~~~~iv~~Ll~~~  427 (691)
                      +++++...+.+|..|+||||+|+++++.+++++|+++|
T Consensus       119 l~~~~~~~~~~d~~g~TpL~~A~~~~~~~iv~~Ll~~G  156 (156)
T d1ihba_         119 VKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG  156 (156)
T ss_dssp             HHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC
T ss_conf             21220112245899989999999839899999999667

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.2e-24  Score=152.52  Aligned_cols=88  Identities=17%  Similarity=0.209  Sum_probs=42.8

Q ss_pred             HHHHHHHCCCHHHHHHHHHCCCHHHHCCCCC-CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCC
Q ss_conf             8879997199999999997092111028999-980999999819967999987509998665456999781999999829
Q 005556          152 VLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKAN  230 (691)
Q Consensus       152 pLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpL~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~A~~~g  230 (691)
                      .||.||..|+.++|+.|++.++... +..|. |.||||+|+ .|+.+++++|++.+.+.+.   .+..|.+|++.++..+
T Consensus         5 ~L~~Aa~~g~~~~vk~lL~~~~~~~-n~~d~~g~t~L~~A~-~~~~~~v~~Ll~~~~~~~~---~~~~~~~~l~~~~~~~   79 (156)
T d1bd8a_           5 RLSGAAARGDVQEVRRLLHRELVHP-DALNRFGKTALQVMM-FGSTAIALELLKQGASPNV---QDTSGTSPVHDAARTG   79 (156)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCCCT-TCCCTTSCCHHHHSC-TTCHHHHHHHHHTTCCTTC---CCTTSCCHHHHHHHTT
T ss_pred             HHHHHHHCCCHHHHHHHHHHCCCCC-CCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCC
T ss_conf             9999999589999999999589998-864899984133432-2222222222222222222---2222222222222222


Q ss_pred             CHHHHHHHHHHCCC
Q ss_conf             49999999970999
Q 005556          231 LYDVALNLLKNHPE  244 (691)
Q Consensus       231 ~~~iv~~Ll~~~~~  244 (691)
                      +.++++.+++++++
T Consensus        80 ~~~~~~~~l~~~~~   93 (156)
T d1bd8a_          80 FLDTLKVLVEHGAD   93 (156)
T ss_dssp             CHHHHHHHHHTTCC
T ss_pred             CCCCCCCCCCCCCC
T ss_conf             22222222222122

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=4.1e-24  Score=149.57  Aligned_cols=148  Identities=15%  Similarity=0.109  Sum_probs=78.6

Q ss_pred             HHHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             99999999099999999982090111002678988650000001100222488898999999862588878664246799
Q 005556           69 LELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGG  148 (691)
Q Consensus        69 ~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~  148 (691)
                      |||+.|++.|+.+.|+.|++.+++..    .+..|.||||+      |+..+  +.++++.++...   ..  ....+..
T Consensus         4 t~L~~Aa~~g~~~~v~~LL~~ga~~~----~~~~g~t~L~~------a~~~~--~~~~~~~~~~~~---~~--~~~~~~~   66 (153)
T d1awcb_           4 KKLLEAARAGQDDEVRILMANGAPFT----TDWLGTSPLHL------AAQYG--HFSTTEVLLRAG---VS--RDARTKV   66 (153)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHHTCCCC----CCTTCCCHHHH------HHHHT--CHHHHHHHHTTT---CC--TTCCCTT
T ss_pred             HHHHHHHHCCCHHHHHHHHHCCCCCC----CCCCCCCCCCC------CCCCC--CCCCCCCCCCCC---CC--CCCCCCC
T ss_conf             79999998789999999998699834----24478753334------32322--222222222222---22--2212222


Q ss_pred             CCHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCC-CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             9908879997199999999997092111028999-980999999819967999987509998665456999781999999
Q 005556          149 GNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLI  227 (691)
Q Consensus       149 G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpL~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~A~  227 (691)
                      +.++++.++...+.++++++...+.+..  .++. |.||||+|+..|+.+++++|++.+++.+   .++.+|.||||+|+
T Consensus        67 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~---~~d~~g~Tpl~~A~  141 (153)
T d1awcb_          67 DRTPLHMAASEGHANIVEVLLKHGADVN--AKDMLKMTALHWATEHNHQEVVELLIKYGADVH---TQSKFCKTAFDISI  141 (153)
T ss_dssp             CCCHHHHHHHHTCHHHHHHHHTTTCCTT--CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHH
T ss_pred             CCCCCCCCCCCCCCEEEECCCCCCCCCC--CCCCCCCHHHHHHHHCCHHHEEEECCCCCCCCC---CCCCCCCCHHHHHH
T ss_conf             3332322223311012212224687612--322467347776643022241231143446772---66898999999999


Q ss_pred             HCCCHHHHHHH
Q ss_conf             82949999999
Q 005556          228 KANLYDVALNL  238 (691)
Q Consensus       228 ~~g~~~iv~~L  238 (691)
                      .+|+.+++++|
T Consensus       142 ~~g~~eiv~lL  152 (153)
T d1awcb_         142 DNGNEDLAEIL  152 (153)
T ss_dssp             HTTCHHHHHHH
T ss_pred             HCCCHHHHHHC
T ss_conf             85999999867

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=4.9e-24  Score=149.13  Aligned_cols=88  Identities=25%  Similarity=0.221  Sum_probs=48.7

Q ss_pred             CHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCC-CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             908879997199999999997092111028999-9809999998199679999875099986654569997819999998
Q 005556          150 NTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIK  228 (691)
Q Consensus       150 ~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpL~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~A~~  228 (691)
                      .||||.||+.|+.+++++|++.+++..   .+. |.||||+|+..++.++++.++........   ....+.++++.++.
T Consensus         3 ~t~L~~Aa~~g~~~~v~~LL~~ga~~~---~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   76 (153)
T d1awcb_           3 GKKLLEAARAGQDDEVRILMANGAPFT---TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA---RTKVDRTPLHMAAS   76 (153)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHTCCCC---CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC---CCTTCCCHHHHHHH
T ss_pred             CHHHHHHHHCCCHHHHHHHHHCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCC
T ss_conf             979999998789999999998699834---244787533343232222222222222222221---22223332322223


Q ss_pred             CCCHHHHHHHHHHCC
Q ss_conf             294999999997099
Q 005556          229 ANLYDVALNLLKNHP  243 (691)
Q Consensus       229 ~g~~~iv~~Ll~~~~  243 (691)
                      ..+.+.++.++..+.
T Consensus        77 ~~~~~~~~~l~~~~~   91 (153)
T d1awcb_          77 EGHANIVEVLLKHGA   91 (153)
T ss_dssp             HTCHHHHHHHHTTTC
T ss_pred             CCCCEEEECCCCCCC
T ss_conf             311012212224687

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=2.9e-25  Score=156.07  Aligned_cols=182  Identities=14%  Similarity=0.094  Sum_probs=110.5

Q ss_pred             CCCCCCCHHHHCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCH---HHHHHHHHCCCHH
Q ss_conf             7898865000000110022248889899999986258887866424679999088799971999---9999999709211
Q 005556           99 FLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNL---KASKILVKHKHEL  175 (691)
Q Consensus        99 ~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~---~ivk~Ll~~~~~l  175 (691)
                      +|..|+||||+      ||..|  +.++|+.|++.|   .+  ++.+|..|+||||.||..++.   ..++.+++...+.
T Consensus       103 ~D~~G~T~LH~------Aa~~g--~~~~v~~Ll~~g---ad--~~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~~  169 (301)
T d1sw6a_         103 VDEHGNTPLHW------LTSIA--NLELVKHLVKHG---SN--RLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPC  169 (301)
T ss_dssp             CSTTCCCHHHH------HHHTT--CHHHHHHHHHTT---CC--TTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGG
T ss_pred             CCCCCCCHHHH------HHHCC--CHHHHHHHHHCC---CC--CCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf             68999888999------99867--999999999878---99--7767764351777742202202466699999997645


Q ss_pred             HHCCCCC-CCCHHHHHHHCCC----HHHH--------HHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHC
Q ss_conf             1028999-9809999998199----6799--------9987509998665456999781999999829499999999709
Q 005556          176 LIKQTNQ-NSLPVHLAALFGH----KDTF--------EYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNH  242 (691)
Q Consensus       176 ~~~~~n~-G~TpL~~Aa~~g~----~~iv--------~~Ll~~~~~~~~~~~~~~~G~t~Lh~A~~~g~~~iv~~Ll~~~  242 (691)
                      . ...|. |.||||.++..+.    ....        .++.........  .....+.++++.+...........+    
T Consensus       170 ~-~~~d~~g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~----  242 (301)
T d1sw6a_         170 L-ILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQ--SGTNEKESKPNDKNGERKDSILENL----  242 (301)
T ss_dssp             G-GEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEE--EC----------------CHHHHHC----
T ss_pred             H-HHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHH--CCCCCCCCHHHHHHHCCHHHHHHHH----
T ss_conf             5-51345327787999998375541899999899999999865872000--0245664046898860148899998----


Q ss_pred             CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99755779999988998719985456873102344342145311125578999998899888887666888888888986
Q 005556          243 PEIVHDIDSQKMALDSLALKPYAFESGSRLGCLEGFIYKCIPVTKQLSQTNDNPNVAGDTENGIGTTNGHSKKSIPYGST  322 (691)
Q Consensus       243 ~~l~~~~d~~~tpLh~Aa~~~~~f~s~~~l~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (691)
                                                                                                      
T Consensus       243 --------------------------------------------------------------------------------  242 (301)
T d1sw6a_         243 --------------------------------------------------------------------------------  242 (301)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
T ss_conf             --------------------------------------------------------------------------------


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCC
Q ss_conf             42112478840169999998544889999999999877620210067771899999819499999999977821011236
Q 005556          323 QQITTYDAKWPCFKAIYAEKLTHMRTVEIVRFICENVIWTNRANRNKLKGALFTATRLGIPEFVNEFIMAYNYSALLLNS  402 (691)
Q Consensus       323 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~  402 (691)
                                                  .+.......  ++..+ ..|+||||+|++.|+.++|+.|++.+++ ++.+|+
T Consensus       243 ----------------------------~~~~~~~~~--in~~D-~~G~TpLh~A~~~g~~~iv~~Ll~~GAd-~~~~n~  290 (301)
T d1sw6a_         243 ----------------------------DLKWIIANM--LNAQD-SNGDTCLNIAARLGNISIVDALLDYGAD-PFIANK  290 (301)
T ss_dssp             ----------------------------SHHHHHHHT--TTCCC-TTSCCHHHHHHHHCCHHHHHHHHHTTCC-TTCCCT
T ss_pred             ----------------------------HHHHHHHCC--CCCCC-CCCCCHHHHHHHCCCHHHHHHHHHCCCC-CCCCCC
T ss_conf             ----------------------------667788607--66878-9998899999986879999999987999-999899


Q ss_pred             CCCCHHHHHH
Q ss_conf             9972999999
Q 005556          403 QNHGIFELAV  412 (691)
Q Consensus       403 ~G~t~Lh~Av  412 (691)
                      .|+||||+|+
T Consensus       291 ~G~Tpl~~A~  300 (301)
T d1sw6a_         291 SGLRPVDFGA  300 (301)
T ss_dssp             TSCCGGGGTC
T ss_pred             CCCCHHHHCC
T ss_conf             9999999737

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=6.2e-23  Score=142.94  Aligned_cols=117  Identities=17%  Similarity=0.175  Sum_probs=55.4

Q ss_pred             HHHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             99999999099999999982090111002678988650000001100222488898999999862588878664246799
Q 005556           69 LELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGG  148 (691)
Q Consensus        69 ~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~  148 (691)
                      +.||.|+..|+.+.++.|++.+.+ ++.+  +..|.||||.      |+ .|  +.++++.|++.+   .+  ++.++..
T Consensus         5 ~~L~~Aa~~G~~~~v~~Ll~~gad-~n~~--~~~g~t~l~~------a~-~g--~~~~v~~Ll~~g---a~--~~~~~~~   67 (125)
T d1bi7b_           5 DWLATAAARGRVEEVRALLEAGAN-PNAP--NSYGRRPIQV------MM-MG--SARVAELLLLHG---AE--PNCADPA   67 (125)
T ss_dssp             THHHHHHHHTCHHHHHHHHTTTCC-TTCC--CSSSCCTTTS------SC-TT--CHHHHHHHHTTT---CC--CCCCCTT
T ss_pred             HHHHHHHHCCCHHHHHHHHHCCCC-CCCC--CCCCCCCCCC------CC-CC--CCCCCCCCCCCC---CC--CCCCCCC
T ss_conf             599999987799999999985974-1332--2212222222------22-22--222222122222---22--2222222


Q ss_pred             CC-HHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCC-CCCHHHHHHHCCCHHHHHHHHH
Q ss_conf             99-08879997199999999997092111028999-9809999998199679999875
Q 005556          149 GN-TVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLE  204 (691)
Q Consensus       149 G~-TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpL~~Aa~~g~~~iv~~Ll~  204 (691)
                      |. ||||+|++.|+.+++++|++.+.++.  .+|. |.||||+|+.+|+.+++++|+.
T Consensus        68 ~~~~~L~~A~~~g~~~~v~~Ll~~ga~~~--~~d~~G~T~l~~A~~~g~~~~v~~Lls  123 (125)
T d1bi7b_          68 TLTRPVHDAAREGFLDTLVVLHRAGARLD--VRDAWGRLPVDLAEELGHRDVARYLRA  123 (125)
T ss_dssp             TCCCHHHHHHHHTCHHHHHHHHHHTCCSS--CCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCHHHHHHHCCCHHHHHHHHH
T ss_conf             22222222223222222222212222233--245789899999998687999999995

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=3.8e-22  Score=138.51  Aligned_cols=128  Identities=23%  Similarity=0.333  Sum_probs=96.5

Q ss_pred             CCHHHHHHHHCCCHHHHHHHHHCCHHHHHC---CCCCCCCCCHHHHCCCCCCHHCC---CCCCHHHHHHHHHCCCCCCCC
Q ss_conf             219999999909999999998209011100---26789886500000011002224---888989999998625888786
Q 005556           67 RHLELYRMIQMNDWQSVDGFVQSNTDILKE---HNFLGRSLTIFHLIMGLLVDVET---DDEATDLIDKLAQSTDVDISE  140 (691)
Q Consensus        67 ~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~---~~~~~~g~T~Lh~~~~l~~Aa~~---g~~~~~iv~~Ll~~~~~~~~~  140 (691)
                      ....|+.|+..++...+..++..+.+....   ...+..|+||||+      |+..   |  +.+++++|++.|   .+ 
T Consensus         6 ~l~~L~~Av~~~dl~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~------A~~~~~~~--~~~iv~~Ll~~g---ad-   73 (154)
T d1dcqa1           6 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHL------AVRSVDRT--SLHIVDFLVQNS---GN-   73 (154)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHH------HHHHCCTT--THHHHHHHHHHC---SC-
T ss_pred             HHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH------HHHHCCCC--CHHHHHHHHHCC---CC-
T ss_conf             9999999999588999999998699867777754578999826999------99832899--899999999749---97-


Q ss_pred             CCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCC-CCCHHHHHHHCCCHHHHHHHHHCCCCC
Q ss_conf             642467999908879997199999999997092111028999-980999999819967999987509998
Q 005556          141 TLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFGHKDTFEYLLEETPGR  209 (691)
Q Consensus       141 ~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpL~~Aa~~g~~~iv~~Ll~~~~~~  209 (691)
                       ++.+|..|+||||+||..|+.+++++|++.++++.  .+|. |.||||+|+..|+.+++++|++.....
T Consensus        74 -in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~gad~~--~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~~~  140 (154)
T d1dcqa1          74 -LDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIE--IANESGETPLDIAKRLKHEHCEELLTQALSGR  140 (154)
T ss_dssp             -TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred             -HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCC
T ss_conf             -33313121010001111233332212213575502--44789999999999939999999999938897

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.87  E-value=1.3e-21  Score=135.45  Aligned_cols=134  Identities=15%  Similarity=0.058  Sum_probs=109.8

Q ss_pred             CCCHHHHCCCCCCHHCCCCCCHHHHHHHHHCCCCCCC-CCCCCCCCCCCHHHHHHHHC---CCHHHHHHHHHCCCHHHHC
Q ss_conf             8650000001100222488898999999862588878-66424679999088799971---9999999999709211102
Q 005556          103 SLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDIS-ETLSCKDGGGNTVLSLCAIR---GNLKASKILVKHKHELLIK  178 (691)
Q Consensus       103 g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~-~~l~~~d~~G~TpLh~Aa~~---G~~~ivk~Ll~~~~~l~~~  178 (691)
                      +.++||.   |+.|++.+  +...+..++..+..... ......+..|+||||+|++.   |+.+++++|++.++++.  
T Consensus         3 ~~~~l~~---L~~Av~~~--dl~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin--   75 (154)
T d1dcqa1           3 TAAKLHS---LCEAVKTR--DIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLD--   75 (154)
T ss_dssp             HHHHHHH---HHHHHHTT--CHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTT--
T ss_pred             CHHHHHH---HHHHHHHC--CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHH--
T ss_conf             7089999---99999958--8999999998699867777754578999826999998328998999999997499733--


Q ss_pred             CCCC-CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCC
Q ss_conf             8999-9809999998199679999875099986654569997819999998294999999997099975
Q 005556          179 QTNQ-NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLKNHPEIV  246 (691)
Q Consensus       179 ~~n~-G~TpL~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~l~  246 (691)
                      .+|. |.||||+||..|+.+++++|++++++...   ++.+|.||||+|+..|+.++++.|++......
T Consensus        76 ~~d~~g~TpLh~A~~~~~~~~v~~Ll~~gad~~~---~d~~g~tpL~~A~~~~~~~i~~~L~~~~~~~~  141 (154)
T d1dcqa1          76 KQTGKGSTALHYCCLTDNAECLKLLLRGKASIEI---ANESGETPLDIAKRLKHEHCEELLTQALSGRF  141 (154)
T ss_dssp             CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC---CCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCC
T ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCC
T ss_conf             3131210100011112333322122135755024---47899999999999399999999999388977

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=9.4e-22  Score=136.29  Aligned_cols=120  Identities=18%  Similarity=0.099  Sum_probs=105.6

Q ss_pred             CCCCHHHHCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCC
Q ss_conf             88650000001100222488898999999862588878664246799990887999719999999999709211102899
Q 005556          102 RSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTN  181 (691)
Q Consensus       102 ~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n  181 (691)
                      .+.++||+      |+..|  +.++|+.|++.|   .+  ++.+|..|.||||.|+ .|+.+++++|++.++++.  .++
T Consensus         2 p~~~~L~~------Aa~~G--~~~~v~~Ll~~g---ad--~n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~~--~~~   65 (125)
T d1bi7b_           2 PSADWLAT------AAARG--RVEEVRALLEAG---AN--PNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPN--CAD   65 (125)
T ss_dssp             CSTTHHHH------HHHHT--CHHHHHHHHTTT---CC--TTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCC--CCC
T ss_pred             CCHHHHHH------HHHCC--CHHHHHHHHHCC---CC--CCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCC--CCC
T ss_conf             87059999------99877--999999999859---74--1332221222222222-222222221222222222--222


Q ss_pred             C--CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH
Q ss_conf             9--9809999998199679999875099986654569997819999998294999999997
Q 005556          182 Q--NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDLIKANLYDVALNLLK  240 (691)
Q Consensus       182 ~--G~TpL~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~A~~~g~~~iv~~Ll~  240 (691)
                      .  +.||||+|+..|+.+++++|++.+.+.+   .++.+|.||||+|+.+|+.+++++|+.
T Consensus        66 ~~~~~~~L~~A~~~g~~~~v~~Ll~~ga~~~---~~d~~G~T~l~~A~~~g~~~~v~~Lls  123 (125)
T d1bi7b_          66 PATLTRPVHDAAREGFLDTLVVLHRAGARLD---VRDAWGRLPVDLAEELGHRDVARYLRA  123 (125)
T ss_dssp             TTTCCCHHHHHHHHTCHHHHHHHHHHTCCSS---CCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCHHHHHHHCCCHHHHHHHHH
T ss_conf             2222222222223222222222212222233---245789899999998687999999995

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=2.5e-22  Score=139.49  Aligned_cols=115  Identities=16%  Similarity=0.139  Sum_probs=57.1

Q ss_pred             HHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCC-CCCHHHHHHHCC
Q ss_conf             2224888989999998625888786642467999908879997199999999997092111028999-980999999819
Q 005556          116 DVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLAALFG  194 (691)
Q Consensus       116 Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpL~~Aa~~g  194 (691)
                      ||..|  +.++|+.|++.|   .+  ++.+|..|+||||+|+..|+.+++++|++.+.+..  .+|. |+||||+|+.+|
T Consensus         8 A~~~G--~~~~v~~Ll~~g---~d--~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~--~~d~~g~tpLh~A~~~g   78 (130)
T d1ycsb1           8 SSLEG--EFDLVQRIIYEV---DD--PSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVN--AADSDGWTPLHCAASCN   78 (130)
T ss_dssp             HHHHT--CHHHHHHHTSTT---SS--CCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTT--CCCTTCCCHHHHHHHTT
T ss_pred             HHHCC--CHHHHHHHHHCC---CC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCHHH
T ss_conf             99939--999999999869---97--56100211111122222222222222222222222--21236764222321026


Q ss_pred             CHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH--HHCCCHHHHHHHHHH
Q ss_conf             96799998750999866545699978199999--982949999999970
Q 005556          195 HKDTFEYLLEETPGRVENFYCGGDGGRLLSDL--IKANLYDVALNLLKN  241 (691)
Q Consensus       195 ~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~A--~~~g~~~iv~~Ll~~  241 (691)
                      +.+++++|++++++....  ...+|.|+++.+  ...|+.+++++|+..
T Consensus        79 ~~~~v~~Ll~~ga~v~~~--~~~~~~~~~~~~~a~~~g~~eiv~~L~~~  125 (130)
T d1ycsb1          79 NVQVCKFLVESGAAVFAM--TYSDMQTAADKCEEMEEGYTQCSQFLYGV  125 (130)
T ss_dssp             CHHHHHHHHHTTCCTTCC--CSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCCC--CCCCCCCHHHHHHHHHCCHHHHHHHHHHH
T ss_conf             889999999869986646--68999889999999986829999999867

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.6e-21  Score=135.05  Aligned_cols=120  Identities=18%  Similarity=0.160  Sum_probs=95.7

Q ss_pred             HHHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             99999999099999999982090111002678988650000001100222488898999999862588878664246799
Q 005556           69 LELYRMIQMNDWQSVDGFVQSNTDILKEHNFLGRSLTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGG  148 (691)
Q Consensus        69 ~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~  148 (691)
                      +.|+.|+..|+.+.++.+++.+.+ ++.+  +.+|.||||+      |+..|  +.++++.|++.+   .+  ++.+|.+
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~~g~d-~n~~--d~~g~t~Lh~------A~~~~--~~~~~~~ll~~g---~~--~~~~d~~   66 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIYEVDD-PSLP--NDEGITALHN------AVCAG--HTEIVKFLVQFG---VN--VNAADSD   66 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTSTTSS-CCCC--CTTSCCHHHH------HHHHT--CHHHHHHHHHHT---CC--TTCCCTT
T ss_pred             HHHHHHHHCCCHHHHHHHHHCCCC-CCCC--CCCCCCCCCC------CCCCC--CCCCCCCCCCCC---CC--CCCCCCC
T ss_conf             999999993999999999986997-5610--0211111122------22222--222222222222---22--2221236


Q ss_pred             CCHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCC-CCCHHHHH--HHCCCHHHHHHHHHC
Q ss_conf             9908879997199999999997092111028999-98099999--981996799998750
Q 005556          149 GNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-NSLPVHLA--ALFGHKDTFEYLLEE  205 (691)
Q Consensus       149 G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-G~TpL~~A--a~~g~~~iv~~Ll~~  205 (691)
                      |+||||+|+..|+.+++++|+++++++. ...+. |.||++++  +..|+.+++++|++.
T Consensus        67 g~tpLh~A~~~g~~~~v~~Ll~~ga~v~-~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~~  125 (130)
T d1ycsb1          67 GWTPLHCAASCNNVQVCKFLVESGAAVF-AMTYSDMQTAADKCEEMEEGYTQCSQFLYGV  125 (130)
T ss_dssp             CCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHCCCCCC-CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHH
T ss_conf             7642223210268899999998699866-4668999889999999986829999999867

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.85  E-value=6.2e-23  Score=142.94  Aligned_cols=105  Identities=18%  Similarity=0.212  Sum_probs=53.4

Q ss_pred             CCHHHHCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCC-
Q ss_conf             6500000011002224888989999998625888786642467999908879997199999999997092111028999-
Q 005556          104 LTIFHLIMGLLVDVETDDEATDLIDKLAQSTDVDISETLSCKDGGGNTVLSLCAIRGNLKASKILVKHKHELLIKQTNQ-  182 (691)
Q Consensus       104 ~T~Lh~~~~l~~Aa~~g~~~~~iv~~Ll~~~~~~~~~~l~~~d~~G~TpLh~Aa~~G~~~ivk~Ll~~~~~l~~~~~n~-  182 (691)
                      +|||++      |+..|  +.++|+.|++.|   .+  ++.+|..|+||||+|+..|+.+++++|++.++++.  .+|. 
T Consensus         3 ~tpL~~------A~~~g--~~~~v~~Ll~~g---~d--~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din--~~d~~   67 (118)
T d1myoa_           3 DKEFMW------ALKNG--DLDEVKDYVAKG---ED--VNRTLEGGRKPLHYAADCGQLEILEFLLLKGADIN--APDKH   67 (118)
T ss_dssp             HHHHHH------HHHTT--CHHHHHHHHTTT---CC--CCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTT--CCSSS
T ss_pred             CHHHHH------HHHCC--CHHHHHHHHHHH---HC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE--ECCCC
T ss_conf             728999------99877--999999999842---01--22322222222222222222222222334320233--10123


Q ss_pred             CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             98099999981996799998750999866545699978199999
Q 005556          183 NSLPVHLAALFGHKDTFEYLLEETPGRVENFYCGGDGGRLLSDL  226 (691)
Q Consensus       183 G~TpL~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~G~t~Lh~A  226 (691)
                      |+||||+|+.+|+.+++++|++.+.+.+   .+|.+|.||||+|
T Consensus        68 g~tpLh~A~~~~~~~~v~~Ll~~Gad~~---~~d~~G~t~l~~a  108 (118)
T d1myoa_          68 HITPLLSAVYEGHVSCVKLLLSKGADKT---VKGPDGLTALEAT  108 (118)
T ss_dssp             CSCHHHHHHTTTCCHHHHHHHTTCCCSS---SSSSSTCCCCCTC
T ss_pred             CCCCHHHHHHCCCHHHHHHHHCCCCCCE---EECCCCCCHHHHH
T ss_conf             3210223320473243243310200000---0389999999998

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.83  E-value=1.4e-21  Score=135.33  Aligned_cols=73  Identities=14%  Similarity=0.085  Sum_probs=28.2

Q ss_pred             CHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             71899999819499999999977821011236997299999961993388987608976654444458998242331
Q 005556          371 KGALFTATRLGIPEFVNEFIMAYNYSALLLNSQNHGIFELAVLHRREKVFNLIHGVNSSYFSISLEDKSGNNILHLT  447 (691)
Q Consensus       371 ~tpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~D~~G~TpLHlA  447 (691)
                      +||||+|+..|+.++++++++.+++ ++.+|..|+||||+|+.+++.+++++|++.|   ++++.+|++|+||||+|
T Consensus        36 ~t~lh~A~~~~~~~~~~~ll~~g~d-in~~d~~g~tpLh~A~~~~~~~~v~~Ll~~G---ad~~~~d~~G~t~l~~a  108 (118)
T d1myoa_          36 RKPLHYAADCGQLEILEFLLLKGAD-INAPDKHHITPLLSAVYEGHVSCVKLLLSKG---ADKTVKGPDGLTALEAT  108 (118)
T ss_dssp             CCTTHHHHHHSTTTHHHHHHHSSCT-TTCCSSSCSCHHHHHHTTTCCHHHHHHHTTC---CCSSSSSSSTCCCCCTC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCE-EEECCCCCCCCHHHHHHCCCHHHHHHHHCCC---CCCEEECCCCCCHHHHH
T ss_conf             2222222222222222223343202-3310123321022332047324324331020---00000389999999998