Citrus Sinensis ID: 005579

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690
MAMKPPTNIWIRRQQCPCGDWKCYIKYEGDDQASTSSQQEKTETTSSLLSSEVVFTPYVGQIFKSDDEAFEYYSNFARKNGFSIRKARSTESQNLGIYRRDFVCYRSGFNQPRKKANVEHPRDRKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHELLEDDQVRMLPAYRKIQEADQERILLLSKAGFPVNRIVKVLELEKGVQPGQLPFIEKDVRNFVRTCKKTVQENDALLTEKRENDTLELLEACKNMAERDVDFVYDYTTDENEKVENIAWSFGDSIRAYTLFGDVVTFDTSYRSITYGLLLGVWFGMDNHGKAIFFGCVLLQDESTHSFAWALQTFVRFMRGRHPQTILTDIDLGLRDSIARELPNTKHVVCIWHILSKLSSWFSSLLGSQYEEFKAEFDMLCRLESVEDFEHQWNHFVARFGLVSDKHVALLFSYRAFWLFSYIRGYFLARMMTVEFSQSVDTFFKKILSEQTCLQVFFEQVCAAAFGNSTREGVQYVHIKTCMPIEEHARSILTPYAFRVLQHEIVLSTQYATTEMTNGSYLVRHYKKMDGEYLVIWIPEDEQIHCSCKEFEHSGILCRHSLRVLVVKNYFQLPEKYLLLRWRLENSLVTMEGPNPQSSSDECAQAFHSLAAALLTESMISKERFSYVHKELTGLLDHVRNMPETNEFVVNMPAHNASD
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccHHHHHHHHHHHHHHcccEEEEccEEccccccEEEEEEEEEcccccccccccccccccccccccccccEEEEEEEEEEcccEEEEEEEEccccccccccccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHccccccccccccccccHHHHHccccccccHHHHHHHHccHHHHHHHHHHHccccccEEEEEccccccccHHcEEccccccHHHHHHcccEEEEEccccccccccEEEEEEEEcccccEEEEEEEccccccccHHHHHHHHHHHHHccccccEEEccccHHHHHHHHHHcccccccccHHHHHHHHHHcccccccccHHHHHHHHHHHHccccHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHcHHHHHHHHHHHHHHHcccEEEEcccEEEEEEEEEEccEEEEEEcccccEEEEEEEcccccccccHHHHHHHHHccccccccccHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccccccccccccccc
ccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccEEEccHHHHHHHHHHHHHHcccEEEEEcEEcccccEEEEEEEEEccccccccccccccccccccccccccccEEEEEEEEEEccccEEEEEEEEcccccccccHHHHHcccccccccHHHHHHHHHHHHccccHHHHHHHHHHHcccccccccccHHHHHHHHHHcccHHHccHHHHHHccccHHHHHHHHHHHHHHHcccEEEEEEEcccccEEEEEEEcccHHHHHHHcccEEEEEccEEcccccccEEEEEEEcccccEEEEEHHHHccccHHHHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHEEccccccEEEEEEEEcccccEEEEEcccccEEEEEcHHEEccccHHHHHHHHHHHccccccccHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccc
mamkpptniwirrqqcpcgdwkcyikyegddqastssqqektettssllssevvftpyvgqifksDDEAFEYYSNFARKNGFSIRKARStesqnlgiyrrdfvcyrsgfnqprkkanvehprdrksvrcgcdaklyLTKEIVDGVTQWYVSQFSnvhnhelleddqvRMLPAYRKIQEADQERILLLSkagfpvnrIVKVLelekgvqpgqlpfieKDVRNFVRTCKKTVQENDALLTEKRENDTLELLEACKNMAERDVDFVYdyttdenekVENIAWSFGDSIRAYTLFGdvvtfdtsyrSITYGLLLGVWfgmdnhgkAIFFGCVLLQDESTHSFAWALQTFVRFmrgrhpqtiltdidLGLRDSIarelpntkhVVCIWHILSKLSSWFSSLLGSQYEEFKAEFDMLCRLESVEDFEHQWNHFVARFGLVSDKHVALLFSYRAFWLFSYIRGYFLARMMTVEFSQSVDTFFKKILSEQTCLQVFFEQVCAAAfgnstregvQYVHIKTCMPIEEHARSILTPYAFRVLQHEIVLSTQYATTEMTNGSYLVRHYKKmdgeylviwipedeqihcsckefehsgilcrhsLRVLVVKNYFQLPEKYLLLRWRLENSlvtmegpnpqsssdECAQAFHSLAAALLTESMISKERFSYVHKELTGLLDhvrnmpetnefvvnmpahnasd
mamkpptniwirrqqcpCGDWKCYIKYEGddqastssqqektettssllssevvFTPYVGQIFKSDDEAFEYYSNFarkngfsirkarstesqnlgiyrrDFVCYRSgfnqprkkanvehprdrksvrcgcdaKLYLTKEIVDGVTQWYVSQFSNVHNHELLEDDQVRMLPAYRKIQEADQERILLLSKAGFPVNRIVKVLElekgvqpgqlpfiekdvRNFVRTCKKTvqendalltekrendTLELLEACKNMAERDVDFVYDYTTDENEKVENIAWSFGDSIRAYTLFGDVVTFDTSYRSITYGLLLGVWFGMDNHGKAIFFGCVLLQDESTHSFAWALQTFVRFMRGRHPQTILTDIDLGLRDSIARELPNTKHVVCIWHILSKLSSWFSSLLGSQYEEFKAEFDMLCRLESVEDFEHQWNHFVARFGLVSDKHVALLFSYRAFWLFSYIRGYFLARMMTVEFSQSVDTFFKKILSEQTCLQVFFEQVCAAAFGNSTREGVQYVHIKTCMPIEEHARSILTPYAFRVLQHEIVLSTqyattemtnGSYLVRHYKKMDGEYLVIWIPEDEQIHCSCKEFEHSGILCRHSLRVLVVKNYFQLPEKYLLLRWRLENSLVTMEGPNPQSSSDECAQAFHSLAAALLTESMISKERFSYVHKELTGLLDHVRNMPETNEFVVNMPAHNASD
MAMKPPTNIWIRRQQCPCGDWKCYIKYEGDDQAstssqqektettssllsseVVFTPYVGQIFKSDDEAFEYYSNFARKNGFSIRKARSTESQNLGIYRRDFVCYRSGFNQPRKKANVEHPRDRKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHELLEDDQVRMLPAYRKIQEADQERILLLSKAGFPVNRIVKVLELEKGVQPGQLPFIEKDVRNFVRTCKKTVQENDALLTEKRENDTLELLEACKNMAERDVDFVYDYTTDENEKVENIAWSFGDSIRAYTLFGDVVTFDTSYRSITYGLLLGVWFGMDNHGKAIFFGCVLLQDESTHSFAWALQTFVRFMRGRHPQTILTDIDLGLRDSIARELPNTKHVVCIWHIlsklsswfssllgsQYEEFKAEFDMLCRLESVEDFEHQWNHFVARFGLVSDKHVALLFSYRAFWLFSYIRGYFLARMMTVEFSQSVDTFFKKILSEQTCLQVFFEQVCAAAFGNSTREGVQYVHIKTCMPIEEHARSILTPYAFRVLQHEIVLSTQYATTEMTNGSYLVRHYKKMDGEYLVIWIPEDEQIHCSCKEFEHSGILCRHSLRVLVVKNYFQLPEKYLLLRWRLENSLVTMEGPNPQSSSDECAQAFHSLAAALLTESMISKERFSYVHKELTGLLDHVRNMPETNEFVVNMPAHNASD
*******NIWIRRQQCPCGDWKCYIKYE**********************SEVVFTPYVGQIFKSDDEAFEYYSNFARKNGFSIRKAR**ESQNLGIYRRDFVCYRSGF****************SVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHELLEDDQVRMLPAYRKIQEADQERILLLSKAGFPVNRIVKVLELEKGVQPGQLPFIEKDVRNFVRTCKKTVQENDALLTEKRENDTLELLEACKNMAERDVDFVYDYTTDENEKVENIAWSFGDSIRAYTLFGDVVTFDTSYRSITYGLLLGVWFGMDNHGKAIFFGCVLLQDESTHSFAWALQTFVRFMRGRHPQTILTDIDLGLRDSIARELPNTKHVVCIWHILSKLSSWFSSLLGSQYEEFKAEFDMLCRLESVEDFEHQWNHFVARFGLVSDKHVALLFSYRAFWLFSYIRGYFLARMMTVEFSQSVDTFFKKILSEQTCLQVFFEQVCAAAFGNSTREGVQYVHIKTCMPIEEHARSILTPYAFRVLQHEIVLSTQYATTEMTNGSYLVRHYKKMDGEYLVIWIPEDEQIHCSCKEFEHSGILCRHSLRVLVVKNYFQLPEKYLLLRWRLENSLVT**************QAFHSLAAALLTESMISKERFSYVHKELTGLLDHVRNM*****************
*****************************************************VFTPYVGQIFKSDDEAFEYYSNFARKNGFSIRKARSTESQNLGIYRRDFVCYRSGF****************SVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHELLEDDQVRMLPAYRKIQEADQERILLLSKAGFPVNRIVKVLELEKGVQPGQLPFIEKDVRNFVRTCKKTVQENDALLTEKRENDTLELLEACKNMAERDVDFVYDYTTDENEKVENIAWSFGDSIRAYTLFGDVVTFDTSYRSITYGLLLGVWFGMDNHGKAIFFGCVLLQDESTHSFAWALQTFVRFMRGRHPQTILTDIDLGLRDSIARELPNTKHVVCIWHILSKLSSWFSSLLGSQYEEFKAEFDMLCRLESVEDFEHQWNHFVARFGLVSDKHVALLFSYRAFWLFSYIRGYFLARMMTVEFSQSVDTFFKKILSEQTCLQVFFEQVCAAAFGNSTREGVQYVHIKTCMPIEEHARSILTPYAFRVLQHEIVLSTQYATTEMTNGSYLVRHYKKMDGEYLVIWIPEDEQIHCSCKEFEHSGILCRHSLRVLVVKNYFQLPEKYLLLRWRLENS***************CAQAFHSLAAALLTESMISKERFSYVHKELTGLL***********************
MAMKPPTNIWIRRQQCPCGDWKCYIKYEG*******************LSSEVVFTPYVGQIFKSDDEAFEYYSNFARKNGFSIRKARSTESQNLGIYRRDFVCYRSGFNQP**************VRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHELLEDDQVRMLPAYRKIQEADQERILLLSKAGFPVNRIVKVLELEKGVQPGQLPFIEKDVRNFVRTCKKTVQENDALLTEKRENDTLELLEACKNMAERDVDFVYDYTTDENEKVENIAWSFGDSIRAYTLFGDVVTFDTSYRSITYGLLLGVWFGMDNHGKAIFFGCVLLQDESTHSFAWALQTFVRFMRGRHPQTILTDIDLGLRDSIARELPNTKHVVCIWHILSKLSSWFSSLLGSQYEEFKAEFDMLCRLESVEDFEHQWNHFVARFGLVSDKHVALLFSYRAFWLFSYIRGYFLARMMTVEFSQSVDTFFKKILSEQTCLQVFFEQVCAAAFGNSTREGVQYVHIKTCMPIEEHARSILTPYAFRVLQHEIVLSTQYATTEMTNGSYLVRHYKKMDGEYLVIWIPEDEQIHCSCKEFEHSGILCRHSLRVLVVKNYFQLPEKYLLLRWRLENSLVTM***********CAQAFHSLAAALLTESMISKERFSYVHKELTGLLDHVRNMPETNEFVVNMPAHNASD
****PPTNI**RRQQC*C**********************************VVFTPYVGQIFKSDDEAFEYYSNFARKNGFSIRKARSTESQNLGIYRRDFVCYRSG******************VRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHELLEDDQVRMLPAYRKIQEADQERILLLSKAGFPVNRIVKVLELEKGVQPGQLPFIEKDVRNFVRTCKKTVQENDALLTEKRENDTLELLEACKNMAERDVDFVYDYTTDENEKVENIAWSFGDSIRAYTLFGDVVTFDTSYRSITYGLLLGVWFGMDNHGKAIFFGCVLLQDESTHSFAWALQTFVRFMRGRHPQTILTDIDLGLRDSIARELPNTKHVVCIWHILSKLSSWFSSLLGSQYEEFKAEFDMLCRLESVEDFEHQWNHFVARFGLVSDKHVALLFSYRAFWLFSYIRGYFLARMMTVEFSQSVDTFFKKILSEQTCLQVFFEQVCAAAFGNSTREGVQYVHIKTCMPIEEHARSILTPYAFRVLQHEIVLSTQYATTEMTNGSYLVRHYKKMDGEYLVIWIPEDEQIHCSCKEFEHSGILCRHSLRVLVVKNYFQLPEKYLLLRWRLENSLV*******QSSSDECAQAFHSLAAALLTESMISKERFSYVHKELTGLLDHVRNMPETN*************
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MAMKPPTNIWIRRQQCPCGDWKCYIKYEGDDQASTSSQQEKTETTSSLLSSEVVFTPYVGQIFKSDDEAFEYYSNFARKNGFSIRKARSTESQNLGIYRRDFVCYRSGFNQPRKKANVEHPRDRKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHELLEDDQVRMLPAYRKIQEADQERILLLSKAGFPVNRIVKVLELEKGVQPGQLPFIEKDVRNFVRTCKKTVQENDALLTEKRENDTLELLEACKNMAERDVDFVYDYTTDENEKVENIAWSFGDSIRAYTLFGDVVTFDTSYRSITYGLLLGVWFGMDNHGKAIFFGCVLLQDESTHSFAWALQTFVRFMRGRHPQTILTDIDLGLRDSIARELPNTKHVVCIWHILSKLSSWFSSLLGSQYEEFKAEFDMLCRLESVEDFEHQWNHFVARFGLVSDKHVALLFSYRAFWLFSYIRGYFLARMMTVEFSQSVDTFFKKILSEQTCLQVFFEQVCAAAFGNSTREGVQYVHIKTCMPIEEHARSILTPYAFRVLQHEIVLSTQYATTEMTNGSYLVRHYKKMDGEYLVIWIPEDEQIHCSCKEFEHSGILCRHSLRVLVVKNYFQLPEKYLLLRWRLENSLVTMEGPNPQSSSDECAQAFHSLAAALLTESMISKERFSYVHKELTGLLDHVRNMPETNEFVVNMPAHNASD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query690 2.2.26 [Sep-21-2011]
Q9LKR4685 Putative protein FAR1-REL yes no 0.978 0.985 0.702 0.0
Q9SY66680 Protein FAR1-RELATED SEQU no no 0.910 0.923 0.436 1e-158
Q9SZL8788 Protein FAR1-RELATED SEQU no no 0.784 0.686 0.317 5e-69
Q9SWG3 827 Protein FAR-RED IMPAIRED no no 0.886 0.740 0.266 2e-59
Q9ZVC9 851 Protein FAR1-RELATED SEQU no no 0.862 0.699 0.259 7e-56
Q9LIE5 839 Protein FAR-RED ELONGATED no no 0.740 0.609 0.259 2e-55
Q9M8J3764 Protein FAR1-RELATED SEQU no no 0.762 0.688 0.256 1e-49
Q6NQJ7 732 Protein FAR1-RELATED SEQU no no 0.763 0.719 0.270 3e-49
Q3E7I5788 Protein FAR1-RELATED SEQU no no 0.753 0.659 0.263 8e-49
Q3EBQ3 807 Protein FAR1-RELATED SEQU no no 0.776 0.664 0.25 1e-44
>sp|Q9LKR4|FRS10_ARATH Putative protein FAR1-RELATED SEQUENCE 10 OS=Arabidopsis thaliana GN=FRS10 PE=2 SV=2 Back     alignment and function desciption
 Score = 1014 bits (2621), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 479/682 (70%), Positives = 555/682 (81%), Gaps = 7/682 (1%)

Query: 1   MAMKPPTNIWIRRQQCPCGDWKCYIKYEGDDQASTSSQQEKTETTSSLLSSEVVFTPYVG 60
           MA+KP  NIWIRRQQCPCGDWKCYI+ E D+   T S+ E T T +S    + VFTPYVG
Sbjct: 1   MALKPLNNIWIRRQQCPCGDWKCYIRLEEDESTITKSEIESTPTPTS--QYDTVFTPYVG 58

Query: 61  QIFKSDDEAFEYYSNFARKNGFSIRKARSTESQNLGIYRRDFVCYRSGFNQPRKKANVEH 120
           QIF +DDEAFEYYS FARK+GFSIRKARSTESQNLG+YRRDFVCYRSGFNQPRKKANVEH
Sbjct: 59  QIFTTDDEAFEYYSTFARKSGFSIRKARSTESQNLGVYRRDFVCYRSGFNQPRKKANVEH 118

Query: 121 PRDRKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHELLEDDQVRMLPAYRKIQEAD 180
           PR+RKSVRCGCD KLYLTKE+VDGV+ WYVSQFSNVHNHELLEDDQVR+LPAYRKIQ++D
Sbjct: 119 PRERKSVRCGCDGKLYLTKEVVDGVSHWYVSQFSNVHNHELLEDDQVRLLPAYRKIQQSD 178

Query: 181 QERILLLSKAGFPVNRIVKVLELEKGVQPGQLPFIEKDVRNFVRTCKKTVQENDALLTEK 240
           QERILLLSKAGFPVNRIVK+LELEKGV  GQLPFIEKDVRNFVR CKK+VQENDA +TEK
Sbjct: 179 QERILLLSKAGFPVNRIVKLLELEKGVVSGQLPFIEKDVRNFVRACKKSVQENDAFMTEK 238

Query: 241 RENDTLELLEACKNMAERDVDFVYDYTTDENEKVENIAWSFGDSIRAYTLFGDVVTFDTS 300
           RE+DTLELLE CK +AERD+DFVYD T+DEN+KVENIAW++GDS+R Y+LFGDVV FDTS
Sbjct: 239 RESDTLELLECCKGLAERDMDFVYDCTSDENQKVENIAWAYGDSVRGYSLFGDVVVFDTS 298

Query: 301 YRSITYGLLLGVWFGMDNHGKAIFFGCVLLQDESTHSFAWALQTFVRFMRGRHPQTILTD 360
           YRS+ YGLLLGV+FG+DN+GKA+  GCVLLQDES  SF WALQTFVRFMRGRHPQTILTD
Sbjct: 299 YRSVPYGLLLGVFFGIDNNGKAMLLGCVLLQDESCRSFTWALQTFVRFMRGRHPQTILTD 358

Query: 361 IDLGLRDSIARELPNTKHVVCIWHILSKLSSWFSSLLGSQYEEFKAEFDMLCRLESVEDF 420
           ID GL+D+I RE+PNT HVV + HI+SKL+SWFS  LGS YEEF+A FDMLCR  +V++F
Sbjct: 359 IDTGLKDAIGREMPNTNHVVFMSHIVSKLASWFSQTLGSHYEEFRAGFDMLCRAGNVDEF 418

Query: 421 EHQWNHFVARFGLVSDKHVALLFSYRAFWLFSYIRGYFLARMMTVEFSQSVDTFFKKILS 480
           E QW+  V RFGLV D+H ALL+S RA WL   IR +F+A+ MT EF+ S+D+F K+++ 
Sbjct: 419 EQQWDLLVTRFGLVPDRHAALLYSCRASWLPCCIREHFVAQTMTSEFNLSIDSFLKRVVD 478

Query: 481 EQTCLQVFFE----QVCAAA-FGNSTREGVQYVHIKTCMPIEEHARSILTPYAFRVLQHE 535
             TC+Q+  E    QV AAA           Y  +KTCMP+E+HAR ILTPYAF VLQ+E
Sbjct: 479 GATCMQLLLEESALQVSAAASLAKQILPRFTYPSLKTCMPMEDHARGILTPYAFSVLQNE 538

Query: 536 IVLSTQYATTEMTNGSYLVRHYKKMDGEYLVIWIPEDEQIHCSCKEFEHSGILCRHSLRV 595
           +VLS QYA  EM NG ++V HYKKM+GE  VIW PE+E+I CSCKEFEHSGILCRH+LRV
Sbjct: 539 MVLSVQYAVAEMANGPFIVHHYKKMEGECCVIWNPENEEIQCSCKEFEHSGILCRHTLRV 598

Query: 596 LVVKNYFQLPEKYLLLRWRLENSLVTMEGPNPQSSSDECAQAFHSLAAALLTESMISKER 655
           L VKN F +PE+Y LLRWR E+  V  E  N Q   D+ AQ FHSL   LLTESMISK+R
Sbjct: 599 LTVKNCFHIPEQYFLLRWRQESPHVATENQNGQGIGDDSAQTFHSLTETLLTESMISKDR 658

Query: 656 FSYVHKELTGLLDHVRNMPETN 677
             Y ++EL+ L+D VRN    N
Sbjct: 659 LDYANQELSLLIDRVRNTAPAN 680

Arabidopsis thaliana (taxid: 3702)
>sp|Q9SY66|FRS11_ARATH Protein FAR1-RELATED SEQUENCE 11 OS=Arabidopsis thaliana GN=FRS11 PE=2 SV=1 Back     alignment and function description
>sp|Q9SZL8|FRS5_ARATH Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1 Back     alignment and function description
>sp|Q9SWG3|FAR1_ARATH Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana GN=FAR1 PE=1 SV=1 Back     alignment and function description
>sp|Q9ZVC9|FRS3_ARATH Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana GN=FRS3 PE=2 SV=2 Back     alignment and function description
>sp|Q9LIE5|FHY3_ARATH Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana GN=FHY3 PE=1 SV=1 Back     alignment and function description
>sp|Q9M8J3|FRS7_ARATH Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=FRS7 PE=2 SV=1 Back     alignment and function description
>sp|Q6NQJ7|FRS4_ARATH Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis thaliana GN=FRS4 PE=2 SV=2 Back     alignment and function description
>sp|Q3E7I5|FRS12_ARATH Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana GN=FRS12 PE=2 SV=1 Back     alignment and function description
>sp|Q3EBQ3|FRS2_ARATH Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=FRS2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query690
359485832 1736 PREDICTED: putative pentatricopeptide re 1.0 0.397 0.830 0.0
296085025 1355 unnamed protein product [Vitis vinifera] 0.995 0.507 0.834 0.0
147860681692 hypothetical protein VITISV_044035 [Viti 1.0 0.997 0.829 0.0
224131862686 predicted protein [Populus trichocarpa] 0.991 0.997 0.804 0.0
255578719651 conserved hypothetical protein [Ricinus 0.940 0.996 0.769 0.0
22327146685 putative protein FAR1-related sequence 1 0.978 0.985 0.702 0.0
9502168694 contains simlarity to Arabidopsis thalia 0.978 0.972 0.691 0.0
297736710690 unnamed protein product [Vitis vinifera] 0.966 0.966 0.663 0.0
225469065 843 PREDICTED: putative protein FAR1-RELATED 0.968 0.792 0.659 0.0
356532357691 PREDICTED: putative protein FAR1-RELATED 0.992 0.991 0.647 0.0
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein At5g09950 [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1220 bits (3156), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 574/691 (83%), Positives = 631/691 (91%), Gaps = 1/691 (0%)

Query: 1    MAMKPPTNIWIRRQQCPCGDWKCYIKYEGDDQASTSSQQEKTETTSSLLSSEVVFTPYVG 60
            MAMKP  NIWIRRQQCPCGDWKCYIKYEGDDQ S +SQ  K+ET+SS L+SEVVFTPYVG
Sbjct: 1045 MAMKPSNNIWIRRQQCPCGDWKCYIKYEGDDQTSANSQLVKSETSSSSLASEVVFTPYVG 1104

Query: 61   QIFKSDDEAFEYYSNFARKNGFSIRKARSTESQNLGIYRRDFVCYRSGFNQPRKKANVEH 120
            QIFKSDDEAFEYYSNFARKNGFSIRKARSTESQNLGIYRRDFVCYRSGFNQPRKKANVEH
Sbjct: 1105 QIFKSDDEAFEYYSNFARKNGFSIRKARSTESQNLGIYRRDFVCYRSGFNQPRKKANVEH 1164

Query: 121  PRDRKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHELLEDDQVRMLPAYRKIQEAD 180
            PRDRKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHELLEDDQVR+LPAYRKIQEAD
Sbjct: 1165 PRDRKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHELLEDDQVRLLPAYRKIQEAD 1224

Query: 181  QERILLLSKAGFPVNRIVKVLELEKGVQPGQLPFIEKDVRNFVRTCKKTVQENDALLTEK 240
            QERILLLSKAGFPVNRIV+VLE EKGVQPGQLPFIEKDVRNFVRTCKKTVQENDALLTEK
Sbjct: 1225 QERILLLSKAGFPVNRIVRVLETEKGVQPGQLPFIEKDVRNFVRTCKKTVQENDALLTEK 1284

Query: 241  RENDTLELLEACKNMAERDVDFVYDYTTDENEKVENIAWSFGDSIRAYTLFGDVVTFDTS 300
            RENDTLELLE CK ++ERD DFVYD+T D N+KVENIAWS+G+S+ AY++FGDVV FDT+
Sbjct: 1285 RENDTLELLETCKALSERDPDFVYDFTMDPNDKVENIAWSYGNSVHAYSVFGDVVAFDTT 1344

Query: 301  YRSITYGLLLGVWFGMDNHGKAIFFGCVLLQDESTHSFAWALQTFVRFMRGRHPQTILTD 360
            YRSITYGLLLGVWFG+DNHGKAIFFGCVLLQDE++ SFAWALQTFVRFMRGR PQTILTD
Sbjct: 1345 YRSITYGLLLGVWFGIDNHGKAIFFGCVLLQDETSQSFAWALQTFVRFMRGRRPQTILTD 1404

Query: 361  IDLGLRDSIARELPNTKHVVCIWHILSKLSSWFSSLLGSQYEEFKAEFDMLCRLESVEDF 420
            ID GLRD+I  ELPNTKHV+C+WHILSKLSSWFS  LG QY +FK++FD+LCRLES+EDF
Sbjct: 1405 IDSGLRDAITSELPNTKHVICLWHILSKLSSWFSLPLGPQYMDFKSQFDILCRLESIEDF 1464

Query: 421  EHQWNHFVARFGLVSDKHVALLFSYRAFWLFSYIRGYFLARMMTVEFSQSVDTFFKKILS 480
            EHQW+H VA+FGLVSDKH+ LLFSYRA W FS IRGYFLARMMT E+S+S+D FFK+ILS
Sbjct: 1465 EHQWHHLVAQFGLVSDKHIGLLFSYRASWPFSCIRGYFLARMMTSEYSKSLDMFFKRILS 1524

Query: 481  EQTCLQVFFEQV-CAAAFGNSTREGVQYVHIKTCMPIEEHARSILTPYAFRVLQHEIVLS 539
             QTCLQ FFEQV  AA++ N TRE +QY+HIKTCMPIEEHA+SILTPYAF VLQHEIVLS
Sbjct: 1525 AQTCLQAFFEQVGVAASWANQTRENMQYMHIKTCMPIEEHAQSILTPYAFNVLQHEIVLS 1584

Query: 540  TQYATTEMTNGSYLVRHYKKMDGEYLVIWIPEDEQIHCSCKEFEHSGILCRHSLRVLVVK 599
             QYAT EM NGSYLVRHYK +DG  LVIW+PE+EQIHCSCKEFEHSG+LCRHSLR+LVVK
Sbjct: 1585 MQYATREMANGSYLVRHYKTVDGGCLVIWMPEEEQIHCSCKEFEHSGLLCRHSLRLLVVK 1644

Query: 600  NYFQLPEKYLLLRWRLENSLVTMEGPNPQSSSDECAQAFHSLAAALLTESMISKERFSYV 659
            NYFQLP+KY  LRWR E+SL+TM+  N QS+SDEC+QAFHSLAA LLTES++SKERF+YV
Sbjct: 1645 NYFQLPDKYFPLRWRKESSLITMDDHNTQSNSDECSQAFHSLAATLLTESLVSKERFNYV 1704

Query: 660  HKELTGLLDHVRNMPETNEFVVNMPAHNASD 690
            HKELTGLLDHVRNMP  +E  +NM  +N  +
Sbjct: 1705 HKELTGLLDHVRNMPVVDEVSLNMAPNNVDE 1735

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|296085025|emb|CBI28440.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147860681|emb|CAN79288.1| hypothetical protein VITISV_044035 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224131862|ref|XP_002321197.1| predicted protein [Populus trichocarpa] gi|222861970|gb|EEE99512.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255578719|ref|XP_002530218.1| conserved hypothetical protein [Ricinus communis] gi|223530265|gb|EEF32165.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|22327146|ref|NP_198205.2| putative protein FAR1-related sequence 10 [Arabidopsis thaliana] gi|257051024|sp|Q9LKR4.2|FRS10_ARATH RecName: Full=Putative protein FAR1-RELATED SEQUENCE 10 gi|332006428|gb|AED93811.1| putative protein FAR1-related sequence 10 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|9502168|gb|AAF88018.1| contains simlarity to Arabidopsis thaliana far-red impaired response protein (GB:AAD51282.1) [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297736710|emb|CBI25746.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225469065|ref|XP_002268022.1| PREDICTED: putative protein FAR1-RELATED SEQUENCE 10-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356532357|ref|XP_003534740.1| PREDICTED: putative protein FAR1-RELATED SEQUENCE 10-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query690
TAIR|locus:2182778685 FRS10 "FAR1-related sequence 1 0.978 0.985 0.678 4.1e-255
TAIR|locus:2012828680 FRS11 "FAR1-related sequence 1 0.878 0.891 0.439 6.5e-138
TAIR|locus:2121060788 FRS5 "FAR1-related sequence 5" 0.802 0.703 0.315 5.8e-66
TAIR|locus:2129665 827 FAR1 "FAR-RED IMPAIRED RESPONS 0.885 0.738 0.268 3.2e-58
TAIR|locus:2059304 851 FRS3 "FAR1-related sequence 3" 0.646 0.524 0.281 1e-56
TAIR|locus:2014639 732 FRS4 "FAR1-related sequence 4" 0.652 0.614 0.271 7.8e-53
TAIR|locus:2090394 839 FHY3 "far-red elongated hypoco 0.647 0.532 0.254 8.9e-52
TAIR|locus:2082420764 FRS7 "FAR1-related sequence 7" 0.613 0.553 0.272 1.3e-46
TAIR|locus:2144930788 FRS12 "FAR1-related sequence 1 0.520 0.455 0.279 1.2e-45
TAIR|locus:2062606 807 FRS2 "FAR1-related sequence 2" 0.563 0.482 0.252 1.4e-42
TAIR|locus:2182778 FRS10 "FAR1-related sequence 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2456 (869.6 bits), Expect = 4.1e-255, P = 4.1e-255
 Identities = 463/682 (67%), Positives = 534/682 (78%)

Query:     1 MAMKPPTNIWIRRQQCPCGDWKCYIKYEGDDQAXXXXXXXXXXXXXXXXXXXVVFTPYVG 60
             MA+KP  NIWIRRQQCPCGDWKCYI+ E D+                      VFTPYVG
Sbjct:     1 MALKPLNNIWIRRQQCPCGDWKCYIRLEEDESTITKSEIESTPTPTSQYDT--VFTPYVG 58

Query:    61 QIFKSDDEAFEYYSNFARKNGFSIRKARSTESQNLGIYRRDFVCYRSGFNQPRKKANVEH 120
             QIF +DDEAFEYYS FARK+GFSIRKARSTESQNLG+YRRDFVCYRSGFNQPRKKANVEH
Sbjct:    59 QIFTTDDEAFEYYSTFARKSGFSIRKARSTESQNLGVYRRDFVCYRSGFNQPRKKANVEH 118

Query:   121 PRDRKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHELLEDDQVRMLPAYRKIQEAD 180
             PR+RKSVRCGCD KLYLTKE+VDGV+ WYVSQFSNVHNHELLEDDQVR+LPAYRKIQ++D
Sbjct:   119 PRERKSVRCGCDGKLYLTKEVVDGVSHWYVSQFSNVHNHELLEDDQVRLLPAYRKIQQSD 178

Query:   181 QERILLLSKAGFPVNRIVKVLELEKGVQPGQLPFIEKDVRNFVRTCKKTVQENDALLTEK 240
             QERILLLSKAGFPVNRIVK+LELEKGV  GQLPFIEKDVRNFVR CKK+VQENDA +TEK
Sbjct:   179 QERILLLSKAGFPVNRIVKLLELEKGVVSGQLPFIEKDVRNFVRACKKSVQENDAFMTEK 238

Query:   241 RENDTLELLEACKNMAERDVDFVYDYTTDENEKVENIAWSFGDSIRAYTLFGDVVTFDTS 300
             RE+DTLELLE CK +AERD+DFVYD T+DEN+KVENIAW++GDS+R Y+LFGDVV FDTS
Sbjct:   239 RESDTLELLECCKGLAERDMDFVYDCTSDENQKVENIAWAYGDSVRGYSLFGDVVVFDTS 298

Query:   301 YRSITYGLLLGVWFGMDNHGKAIFFGCVLLQDESTHSFAWALQTFVRFMRGRHPQTILTD 360
             YRS+ YGLLLGV+FG+DN+GKA+  GCVLLQDES  SF WALQTFVRFMRGRHPQTILTD
Sbjct:   299 YRSVPYGLLLGVFFGIDNNGKAMLLGCVLLQDESCRSFTWALQTFVRFMRGRHPQTILTD 358

Query:   361 IDLGLRDSIARELPNTKHVVCIWHIXXXXXXXXXXXXXXQYEEFKAEFDMLCRLESVEDF 420
             ID GL+D+I RE+PNT HVV + HI               YEEF+A FDMLCR  +V++F
Sbjct:   359 IDTGLKDAIGREMPNTNHVVFMSHIVSKLASWFSQTLGSHYEEFRAGFDMLCRAGNVDEF 418

Query:   421 EHQWNHFVARFGLVSDKHVALLFSYRAFWLFSYIRGYFLARMMTVEFSQSVDTFFKKILS 480
             E QW+  V RFGLV D+H ALL+S RA WL   IR +F+A+ MT EF+ S+D+F K+++ 
Sbjct:   419 EQQWDLLVTRFGLVPDRHAALLYSCRASWLPCCIREHFVAQTMTSEFNLSIDSFLKRVVD 478

Query:   481 EQTCLQVFFE----QVCAAA-FGNSTREGVQYVHIKTCMPIEEHARSILTPYAFRVLQHE 535
               TC+Q+  E    QV AAA           Y  +KTCMP+E+HAR ILTPYAF VLQ+E
Sbjct:   479 GATCMQLLLEESALQVSAAASLAKQILPRFTYPSLKTCMPMEDHARGILTPYAFSVLQNE 538

Query:   536 IVLSTQYATTEMTNGSYLVRHYKKMDGEYLVIWIPEDEQIHCSCKEFEHSGILCRHSLRV 595
             +VLS QYA  EM NG ++V HYKKM+GE  VIW PE+E+I CSCKEFEHSGILCRH+LRV
Sbjct:   539 MVLSVQYAVAEMANGPFIVHHYKKMEGECCVIWNPENEEIQCSCKEFEHSGILCRHTLRV 598

Query:   596 LVVKNYFQLPEKYLLLRWRLENSLVTMEGPNPQSSSDECAQAFHSLAAALLTESMISKER 655
             L VKN F +PE+Y LLRWR E+  V  E  N Q   D+ AQ FHSL   LLTESMISK+R
Sbjct:   599 LTVKNCFHIPEQYFLLRWRQESPHVATENQNGQGIGDDSAQTFHSLTETLLTESMISKDR 658

Query:   656 FSYVHKELTGLLDHVRNMPETN 677
               Y ++EL+ L+D VRN    N
Sbjct:   659 LDYANQELSLLIDRVRNTAPAN 680
GO:0005634 "nucleus" evidence=ISM
GO:0008270 "zinc ion binding" evidence=IEA
GO:0009639 "response to red or far red light" evidence=ISS
TAIR|locus:2012828 FRS11 "FAR1-related sequence 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121060 FRS5 "FAR1-related sequence 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2129665 FAR1 "FAR-RED IMPAIRED RESPONSE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2059304 FRS3 "FAR1-related sequence 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014639 FRS4 "FAR1-related sequence 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090394 FHY3 "far-red elongated hypocotyls 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082420 FRS7 "FAR1-related sequence 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2144930 FRS12 "FAR1-related sequence 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2062606 FRS2 "FAR1-related sequence 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LKR4FRS10_ARATHNo assigned EC number0.70230.97820.9854yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query690
PLN03097 846 PLN03097, FHY3, Protein FAR-RED ELONGATED HYPOCOTY 4e-69
pfam0310190 pfam03101, FAR1, FAR1 DNA-binding domain 2e-24
pfam1055188 pfam10551, MULE, MULE transposase domain 1e-20
pfam0443438 pfam04434, SWIM, SWIM zinc finger 1e-05
smart0057528 smart00575, ZnF_PMZ, plant mutator transposase zin 4e-05
>gnl|CDD|178645 PLN03097, FHY3, Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional Back     alignment and domain information 
 Score =  241 bits (617), Expect = 4e-69
 Identities = 177/662 (26%), Positives = 311/662 (46%), Gaps = 85/662 (12%)

Query: 57  PYVGQIFKSDDEAFEYYSNFARKNGFS--IRKARSTESQNLGIYRRDFVCYRSG------ 108
           P  G  F+S  EA+ +Y  +AR  GF+  I+ +R +++    I  + F C R G      
Sbjct: 74  PLSGMEFESHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAK-FACSRYGTKREYD 132

Query: 109 --FNQPRKKANVEHPRD----RKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHELL 162
             FN+PR +   + P +    R   +  C A +++ K   DG  +W +  F   HNHELL
Sbjct: 133 KSFNRPRARQTKQDPENGTGRRSCAKTDCKASMHV-KRRPDG--KWVIHSFVKEHNHELL 189

Query: 163 E----DDQVRMLPAYRKIQEADQERILLL---SKAGFPVNRIVKVLELEKGVQPGQLPFI 215
                 +Q R + A    Q A+ + ++ L   SK+ F   R +       G++ G     
Sbjct: 190 PAQAVSEQTRKMYAAMARQFAEYKNVVGLKNDSKSSFDKGRNL-------GLEAG----- 237

Query: 216 EKDVRNFVRTCKKTVQENDALLTEKRENDTLELLEACKNMAERDVDFVYDYTTDENEKVE 275
                                       DT  LL+    M   + +F Y     E+++++
Sbjct: 238 ----------------------------DTKILLDFFTQMQNMNSNFFYAVDLGEDQRLK 269

Query: 276 NIAWSFGDSIRAYTLFGDVVTFDTSYRSITYGLLLGVWFGMDNHGKAIFFGCVLLQDEST 335
           N+ W    S   Y  F DVV+FDT+Y    Y + L ++ G++ H + +  GC L+ DES 
Sbjct: 270 NLFWVDAKSRHDYGNFSDVVSFDTTYVRNKYKMPLALFVGVNQHYQFMLLGCALISDESA 329

Query: 336 HSFAWALQTFVRFMRGRHPQTILTDIDLGLRDSIARELPNTKHVVCIWHILSKLSSWFSS 395
            +++W +QT++R M G+ P+ I+TD D  ++  I+   PN  H   +WHIL K+S     
Sbjct: 330 ATYSWLMQTWLRAMGGQAPKVIITDQDKAMKSVISEVFPNAHHCFFLWHILGKVSENLGQ 389

Query: 396 LLGSQYEEFKAEFDM-LCRLESVEDFEHQWNHFVARFGLVSDKHVALLFSYRAFWLFSYI 454
           ++  Q+E F A+F+  + R  + E+F  +W   + RF L  D+ +  L+  R  W+ +Y+
Sbjct: 390 VI-KQHENFMAKFEKCIYRSWTEEEFGKRWWKILDRFELKEDEWMQSLYEDRKQWVPTYM 448

Query: 455 RGYFLARMMTVEFSQSVDTFFKKILSEQTCLQVFFEQVCA--------AAFGNSTREGVQ 506
           R  FLA M TV+ S+S++ FF K + ++T +Q F +Q            A  +S     Q
Sbjct: 449 RDAFLAGMSTVQRSESINAFFDKYVHKKTTVQEFVKQYETILQDRYEEEAKADSDTWNKQ 508

Query: 507 YVHIKTCMPIEEHARSILTPYAFRVLQHE----IVLSTQYATTEMTNGSYLVRHYKKMDG 562
              +K+  P+E+    + T   F+  Q E    +    +  + + T+ ++ V+ ++K + 
Sbjct: 509 PA-LKSPSPLEKSVSGVYTHAVFKKFQVEVLGAVACHPKMESQDETSITFRVQDFEK-NQ 566

Query: 563 EYLVIWIPEDEQIHCSCKEFEHSGILCRHSLRVLVVKNYFQLPEKYLLLRWRLENSLVTM 622
           ++ V W     ++ C C+ FE+ G LCRH+L VL +     +P +Y+L RW  +     +
Sbjct: 567 DFTVTWNQTKLEVSCICRLFEYKGYLCRHALVVLQMCQLSAIPSQYILKRWTKDAKSRHL 626

Query: 623 EGPNPQSSSDECAQAFHSL---AAALLTESMISKERFSYVHKELTGLLDHVRNMPETNEF 679
            G   +       Q ++ L   A  L  E+ +S+E ++   + L     +  +M  +N+ 
Sbjct: 627 LGEESEQVQSR-VQRYNDLCQRALKLSEEASLSQESYNIAFRALEEAFGNCISMNNSNKS 685

Query: 680 VV 681
           +V
Sbjct: 686 LV 687

Length = 846
>gnl|CDD|217369 pfam03101, FAR1, FAR1 DNA-binding domain Back     alignment and domain information
>gnl|CDD|220806 pfam10551, MULE, MULE transposase domain Back     alignment and domain information
>gnl|CDD|218087 pfam04434, SWIM, SWIM zinc finger Back     alignment and domain information
>gnl|CDD|128845 smart00575, ZnF_PMZ, plant mutator transposase zinc finger Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 690
PLN03097 846 FHY3 Protein FAR-RED ELONGATED HYPOCOTYL 3; Provis 100.0
PF1055193 MULE: MULE transposase domain; InterPro: IPR018289 99.86
PF0310191 FAR1: FAR1 DNA-binding domain; InterPro: IPR004330 99.8
PF00872381 Transposase_mut: Transposase, Mutator family; Inte 99.75
PF08731111 AFT: Transcription factor AFT; InterPro: IPR014842 99.35
COG3328379 Transposase and inactivated derivatives [DNA repli 99.28
smart0057528 ZnF_PMZ plant mutator transposase zinc finger. 98.91
PF0310867 DBD_Tnp_Mut: MuDR family transposase; InterPro: IP 98.45
PF0443440 SWIM: SWIM zinc finger; InterPro: IPR007527 Zinc f 98.27
PF01610249 DDE_Tnp_ISL3: Transposase; InterPro: IPR002560 Aut 96.77
PF06782470 UPF0236: Uncharacterised protein family (UPF0236); 94.74
PF0310660 WRKY: WRKY DNA -binding domain; InterPro: IPR00365 94.28
PF13610140 DDE_Tnp_IS240: DDE domain 93.4
PF00665120 rve: Integrase core domain; InterPro: IPR001584 In 88.83
smart0077459 WRKY DNA binding domain. The WRKY domain is a DNA 85.84
PF04937153 DUF659: Protein of unknown function (DUF 659); Int 82.22
>PLN03097 FHY3 Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional Back     alignment and domain information 
Probab=100.00  E-value=4.7e-125  Score=1064.45  Aligned_cols=590  Identities=26%  Similarity=0.497  Sum_probs=514.8

Q ss_pred             cCCCCCCCCCCCCccCCHHHHHHHHHHHHhhcCcEEEEeeeeecCCC-eeEEEEEeeccccccccCcCC-C---------
Q 005579           49 LSSEVVFTPYVGQIFKSDDEAFEYYSNFARKNGFSIRKARSTESQNL-GIYRRDFVCYRSGFNQPRKKA-N---------  117 (690)
Q Consensus        49 ~~~~~~~~P~vG~~F~S~eea~~fy~~yA~~~GF~vr~~~s~~~~~~-~~~~~~~~C~r~G~~~~~~~~-~---------  117 (690)
                      .+.+...+|.+||+|+|+|||++||+.||+.+||+||+.++++++.+ +++.++|+|+|+|+++.+.+. +         
T Consensus        66 ~~~~~~~~P~vGMeF~S~eeA~~FYn~YA~~~GFsVRi~~srrsk~~~~ii~r~fvCsreG~~~~~~~~~~~~~~~~~k~  145 (846)
T PLN03097         66 FKEDTNLEPLSGMEFESHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSFNRPRARQTKQ  145 (846)
T ss_pred             ccCCCCccCcCCCeECCHHHHHHHHHHHHhhcCceEEeeceeccCCCCcEEEEEEEEcCCCCCccccccccccccccccc
Confidence            45677889999999999999999999999999999999999887754 788999999999987543210 0         


Q ss_pred             --CCCCCCCCcccccccceeEEEEeeecCcccEEEEEeecCcCCCCCCCcccccccccccCCHHHHHHHHHHhhcCCChh
Q 005579          118 --VEHPRDRKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHELLEDDQVRMLPAYRKIQEADQERILLLSKAGFPVN  195 (690)
Q Consensus       118 --~~~~r~r~s~r~gCpa~i~i~~~~~~~~~~w~V~~~~~~HNH~l~~~~~~~~l~s~R~l~~~~~~~i~~l~~~gi~~~  195 (690)
                        ...+++|+.+||||||+|+|++.   ..|+|+|+.|+.+|||||.++..+         +              +.++
T Consensus       146 ~~~~~~~rR~~tRtGC~A~m~Vk~~---~~gkW~V~~fv~eHNH~L~p~~~~---------~--------------~~~r  199 (846)
T PLN03097        146 DPENGTGRRSCAKTDCKASMHVKRR---PDGKWVIHSFVKEHNHELLPAQAV---------S--------------EQTR  199 (846)
T ss_pred             CcccccccccccCCCCceEEEEEEc---CCCeEEEEEEecCCCCCCCCcccc---------c--------------hhhh
Confidence              01123456789999999999875   458999999999999999876432         1              1233


Q ss_pred             HHHHHHHHhcCCCCCCCCcccccchhhHHHhhhhhhhhhhhhhhcccchHHHHHHHHHhhhcCCCCeEEEEeecCcccee
Q 005579          196 RIVKVLELEKGVQPGQLPFIEKDVRNFVRTCKKTVQENDALLTEKRENDTLELLEACKNMAERDVDFVYDYTTDENEKVE  275 (690)
Q Consensus       196 ~I~~~l~~~~g~~~~~~~~t~~Di~N~~~~~rk~~~~~~~~~~~~~~~d~~~ll~~~~~~~~~np~~~~~~~~d~~~~~~  275 (690)
                      +++..+....+ ...+++.+..|..|...+.|+.         .+..+|++.|++||+++|.+||+|+|++++|++|+++
T Consensus       200 ~~~~~~~~~~~-~~~~v~~~~~d~~~~~~~~r~~---------~~~~gD~~~ll~yf~~~q~~nP~Ffy~~qlDe~~~l~  269 (846)
T PLN03097        200 KMYAAMARQFA-EYKNVVGLKNDSKSSFDKGRNL---------GLEAGDTKILLDFFTQMQNMNSNFFYAVDLGEDQRLK  269 (846)
T ss_pred             hhHHHHHhhhh-ccccccccchhhcchhhHHHhh---------hcccchHHHHHHHHHHHHhhCCCceEEEEEccCCCee
Confidence            34444443333 2456777788888877665543         2367899999999999999999999999999999999


Q ss_pred             eeeecccccHHHHhhcCCEEEEcccccccccCceeeeEEEEeccCceEEEEEeeccCCCcchHHHHHHHHHHHhcCCCCe
Q 005579          276 NIAWSFGDSIRAYTLFGDVVTFDTSYRSITYGLLLGVWFGMDNHGKAIFFGCVLLQDESTHSFAWALQTFVRFMRGRHPQ  355 (690)
Q Consensus       276 ~if~~~~~~~~~~~~f~dvl~~D~Ty~tn~y~~pl~~~~gvd~~~~~~~~~~al~~~Et~es~~w~l~~f~~~~~~~~p~  355 (690)
                      +|||+|+.++.+|.+|||||+||+||+||+|++||++|+|||||+++++|||||+.+|+.+||.|+|++|+++|++++|+
T Consensus       270 niFWaD~~sr~~Y~~FGDvV~fDTTY~tN~y~~Pfa~FvGvNhH~qtvlfGcaLl~dEt~eSf~WLf~tfl~aM~gk~P~  349 (846)
T PLN03097        270 NLFWVDAKSRHDYGNFSDVVSFDTTYVRNKYKMPLALFVGVNQHYQFMLLGCALISDESAATYSWLMQTWLRAMGGQAPK  349 (846)
T ss_pred             eEEeccHHHHHHHHhcCCEEEEeceeeccccCcEEEEEEEecCCCCeEEEEEEEcccCchhhHHHHHHHHHHHhCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecccchHHHHHHHhhCCCCceecccchhhhhhhhhhhcccccchhhHHHHHhhh-cCCCCHHHHHHHHHHHHhhcCCc
Q 005579          356 TILTDIDLGLRDSIARELPNTKHVVCIWHILSKLSSWFSSLLGSQYEEFKAEFDML-CRLESVEDFEHQWNHFVARFGLV  434 (690)
Q Consensus       356 ~iitD~~~~l~~Ai~~vfP~a~h~lC~~Hi~~n~~~~~~~~~~~~~~~~~~~~~~l-~~~~t~~eFe~~w~~l~~~~~~~  434 (690)
                      +||||+|.+|++||++|||+|.|++|.|||++|+.++++... ...+.|..+|+.| +.+.+++||+..|..|+++|+|+
T Consensus       350 tIiTDqd~am~~AI~~VfP~t~Hr~C~wHI~~~~~e~L~~~~-~~~~~f~~~f~~cv~~s~t~eEFE~~W~~mi~ky~L~  428 (846)
T PLN03097        350 VIITDQDKAMKSVISEVFPNAHHCFFLWHILGKVSENLGQVI-KQHENFMAKFEKCIYRSWTEEEFGKRWWKILDRFELK  428 (846)
T ss_pred             eEEecCCHHHHHHHHHHCCCceehhhHHHHHHHHHHHhhHHh-hhhhHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccc
Confidence            999999999999999999999999999999999999998754 3457899999885 56899999999999999999999


Q ss_pred             ccHHHHHHHHhhhhhhhhhcccccccccccccCCcchHHHHhhhcCCCCCHHHHHHHHHH-h--hhchhhhcc----ccc
Q 005579          435 SDKHVALLFSYRAFWLFSYIRGYFLARMMTVEFSQSVDTFFKKILSEQTCLQVFFEQVCA-A--AFGNSTREG----VQY  507 (690)
Q Consensus       435 ~~~~l~~~~~~r~~W~~~y~~~~~~~g~~t~~~~Es~n~~lk~~~~~~~~l~~f~~~~~~-~--~~~~~~~~~----~~~  507 (690)
                      +++||+.||+.|++||++|+++.|++||.||+++||+|++|+++++++++|..|+++|+. +  .+.++.+.+    ...
T Consensus       429 ~n~WL~~LY~~RekWapaY~k~~F~agm~sTqRSES~Ns~fk~yv~~~tsL~~Fv~qye~~l~~~~ekE~~aD~~s~~~~  508 (846)
T PLN03097        429 EDEWMQSLYEDRKQWVPTYMRDAFLAGMSTVQRSESINAFFDKYVHKKTTVQEFVKQYETILQDRYEEEAKADSDTWNKQ  508 (846)
T ss_pred             ccHHHHHHHHhHhhhhHHHhcccccCCcccccccccHHHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCC
Confidence            999999999999999999999999999999999999999999999999999999999998 2  233333332    345


Q ss_pred             eeecccChHHHHHHhhchHHHHHHHHHHHHHhhcceEEEee-CC---eEEEEEEEeeCCcEEEEEecCCceEEeecCCcc
Q 005579          508 VHIKTCMPIEEHARSILTPYAFRVLQHEIVLSTQYATTEMT-NG---SYLVRHYKKMDGEYLVIWIPEDEQIHCSCKEFE  583 (690)
Q Consensus       508 ~~~~~~~pie~~~~~vyT~~~f~~~q~el~~s~~~~v~~~~-~~---~y~V~~~~~~~~~~~V~~~~~~~~~~CsC~~fe  583 (690)
                      +.+++++|||+||+.+|||.||++||+|+..+..|.+.... +|   +|.|....+ ++.|.|.+++..+.++|+|++||
T Consensus       509 P~l~t~~piEkQAs~iYT~~iF~kFQ~El~~~~~~~~~~~~~dg~~~~y~V~~~~~-~~~~~V~~d~~~~~v~CsC~kFE  587 (846)
T PLN03097        509 PALKSPSPLEKSVSGVYTHAVFKKFQVEVLGAVACHPKMESQDETSITFRVQDFEK-NQDFTVTWNQTKLEVSCICRLFE  587 (846)
T ss_pred             cccccccHHHHHHHHHhHHHHHHHHHHHHHHhhheEEeeeccCCceEEEEEEEecC-CCcEEEEEecCCCeEEeeccCee
Confidence            68899999999999999999999999999999999876543 33   688876554 56899999999999999999999


Q ss_pred             ccCccchhHHHHHhhcCcccCCCcchhhhhccccCCcccCCCCC--CCCchHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 005579          584 HSGILCRHSLRVLVVKNYFQLPEKYLLLRWRLENSLVTMEGPNP--QSSSDECAQAFHSLAAALLTESMISKERFSYVHK  661 (690)
Q Consensus       584 ~~GipC~Hil~Vl~~~~i~~iP~~yil~RWtk~a~~~~~~~~~~--~~~~~~r~~~l~~~~~~~~~~a~~s~e~~~~~~~  661 (690)
                      +.||||+|||+||.++||.+||++|||+||||+|+.....+...  ..+...||+.|++.+.+++.+|+.|.|.|..|++
T Consensus       588 ~~GILCrHaLkVL~~~~v~~IP~~YILkRWTKdAK~~~~~~~~~~~~~~~~~Ryn~L~r~a~kla~~as~S~E~y~~a~~  667 (846)
T PLN03097        588 YKGYLCRHALVVLQMCQLSAIPSQYILKRWTKDAKSRHLLGEESEQVQSRVQRYNDLCQRALKLSEEASLSQESYNIAFR  667 (846)
T ss_pred             cCccchhhHHHHHhhcCcccCchhhhhhhchhhhhhcccCccccccccchhhHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            99999999999999999999999999999999999876544322  2345679999999999999999999999999999


Q ss_pred             HHHHHHHhhccCCcc
Q 005579          662 ELTGLLDHVRNMPET  676 (690)
Q Consensus       662 ~l~~l~~~i~~~~~~  676 (690)
                      +|++++++++.|.-+
T Consensus       668 ~L~e~~~~~~~~~n~  682 (846)
T PLN03097        668 ALEEAFGNCISMNNS  682 (846)
T ss_pred             HHHHHHHHHHHhhcc
Confidence            999999999887443

>PF10551 MULE: MULE transposase domain; InterPro: IPR018289 This entry represents a domain found in Mutator-like elements (MULE)-encoded tranposases, some of which also contain a zinc-finger motif [, ] Back     alignment and domain information
>PF03101 FAR1: FAR1 DNA-binding domain; InterPro: IPR004330 Phytochrome A is the primary photoreceptor for mediating various far-red light-induced responses in higher plants Back     alignment and domain information
>PF00872 Transposase_mut: Transposase, Mutator family; InterPro: IPR001207 Autonomous mobile genetic elements such as transposon or insertion sequences (IS) encode an enzyme, transposase, that is required for excising and inserting the mobile element Back     alignment and domain information
>PF08731 AFT: Transcription factor AFT; InterPro: IPR014842 AFT (activator of iron transcription) is an iron regulated transcriptional activator that regulates the expression of genes involved in iron homeostasis Back     alignment and domain information
>COG3328 Transposase and inactivated derivatives [DNA replication, recombination, and repair] Back     alignment and domain information
>smart00575 ZnF_PMZ plant mutator transposase zinc finger Back     alignment and domain information
>PF03108 DBD_Tnp_Mut: MuDR family transposase; InterPro: IPR004332 The plant MuDR transposase domain is present in plant proteins that are presumed to be the transposases for Mutator transposable elements [, ] Back     alignment and domain information
>PF04434 SWIM: SWIM zinc finger; InterPro: IPR007527 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>PF01610 DDE_Tnp_ISL3: Transposase; InterPro: IPR002560 Autonomous mobile genetic elements such as transposon or insertion sequences (IS) encode an enzyme, transposase, that is required for excising and inserting the mobile element Back     alignment and domain information
>PF06782 UPF0236: Uncharacterised protein family (UPF0236); InterPro: IPR009620 This is a group of proteins of unknown function Back     alignment and domain information
>PF03106 WRKY: WRKY DNA -binding domain; InterPro: IPR003657 The WRKY domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger- like motif Back     alignment and domain information
>PF13610 DDE_Tnp_IS240: DDE domain Back     alignment and domain information
>PF00665 rve: Integrase core domain; InterPro: IPR001584 Integrase comprises three domains capable of folding independently and whose three-dimensional structures are known Back     alignment and domain information
>smart00774 WRKY DNA binding domain Back     alignment and domain information
>PF04937 DUF659: Protein of unknown function (DUF 659); InterPro: IPR007021 These are transposase-like proteins with no known function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query690
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 68.0 bits (165), Expect = 7e-12
 Identities = 87/635 (13%), Positives = 179/635 (28%), Gaps = 160/635 (25%)

Query: 98  YRRDFVCY------RSGFNQPRKKANVEH----PRDRKSVR----CGCDAKLYLTKEIVD 143
           +  +F C       +S       K  ++H                     +  + ++ V+
Sbjct: 29  FVDNFDCKDVQDMPKSIL----SKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVE 84

Query: 144 GVTQ----WYVSQFSNVHNHELLEDDQVRMLPAYRKIQEADQERILLLSKAGFPVNRIVK 199
            V +    + +S          +     RM    R     D +   + +K  + V+R+  
Sbjct: 85  EVLRINYKFLMSPIKTEQRQPSMM---TRMYIEQRDRLYNDNQ---VFAK--YNVSRLQP 136

Query: 200 VLELEKGVQPGQLPFIEKDVRNFV----RTCKKTVQENDALLTEKRE------------- 242
            L+L + +   +L    +  +N +        KT    D  L+ K +             
Sbjct: 137 YLKLRQALL--EL----RPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLK 190

Query: 243 --NDTLELLEACKNMAERDVDFVYDYTTDENEKVENIAWSFGDSIRAYTLFGDVVTFDTS 300
             N    +LE  + +    +D  +   +D +  ++    S    +R   L          
Sbjct: 191 NCNSPETVLEMLQKLL-YQIDPNWTSRSDHSSNIKLRIHSIQAELR--RLL-----KSKP 242

Query: 301 YRSITYGLLL--GVWFGMD-NHGKAIFFGC-VLL--QDESTHSFAWALQTFVRFMRGRHP 354
           Y +    LL+   V    +     A    C +LL  + +        +  F+      H 
Sbjct: 243 YEN---CLLVLLNVQ---NAKAWNAFNLSCKILLTTRFKQ-------VTDFLSAATTTHI 289

Query: 355 QTILTDIDLGLRDSIARELPNTKHVVCIWHILSKLSSWFSSLLGSQYEEFKAEFDMLCRL 414
              L    + L     + L               L  +          E          +
Sbjct: 290 --SLDHHSMTLTPDEVKSL---------------LLKYLDCRPQDLPREVLTTNPRRLSI 332

Query: 415 --ESVEDFEHQWNHF----VARFGLVSDKHVALLFSYRAFWLFSYIRGYFLARMMTVEFS 468
             ES+ D    W+++      +   + +  + +L            R  F    ++V F 
Sbjct: 333 IAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPA-------EYRKMF--DRLSV-FP 382

Query: 469 QSVDTFFKKILSEQTCLQVFFEQVCAAAFGNSTREGVQYVHIKTCMPIEEHARSILT--P 526
            S       I      L +         + +  +  V  V +        H  S++   P
Sbjct: 383 PSA-----HI-PTIL-LSLI--------WFDVIKSDVMVV-VNKL-----HKYSLVEKQP 421

Query: 527 YAFRVLQHEIVLSTQYATTEMTNG-SYLVRHY---KKMDGEYLVIWIPEDEQIHCSCKEF 582
               +    I L  +            +V HY   K  D + L+     D+        +
Sbjct: 422 KESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIP-PYLDQYF------Y 474

Query: 583 EHSGILCRHSLRVLVVKNYFQLPEKYLLLRWRLENSLVTMEGPNPQSSSDECAQAFHSLA 642
            H G    H   +   +        +L  R+ LE  +      +  ++ +      ++L 
Sbjct: 475 SHIG---HHLKNIEHPERMTLFRMVFLDFRF-LEQKIR-----HDSTAWNASGSILNTLQ 525

Query: 643 AALLTESMISKERFSYVHKELTGLLDHVRNMPETN 677
                +  I      Y  + +  +LD +    E N
Sbjct: 526 QLKFYKPYICDNDPKY-ERLVNAILDFLPK-IEEN 558
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query690
d1wj2a_71 WRKY DNA-binding protein 4 {Thale cress (Arabidops 91.78
>d1wj2a_ g.79.1.1 (A:) WRKY DNA-binding protein 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: Small proteins
fold: WRKY DNA-binding domain
superfamily: WRKY DNA-binding domain
family: WRKY DNA-binding domain
domain: WRKY DNA-binding protein 4
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.78  E-value=0.13  Score=25.29  Aligned_cols=57  Identities=21%  Similarity=0.360  Sum_probs=36.6

Q ss_pred             CCEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCC
Q ss_conf             93899800122179806999986235665456767877788889842125553458889556481109999860676799
Q 005579           81 GFSIRKARSTESQNLGIYRRDFVCYRSGFNQPRKKANVEHPRDRKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHE  160 (690)
Q Consensus        81 GF~ir~~~s~~~~~~~~~~~~~~C~r~G~~~~~~~~~~~~~r~~~s~r~gCpa~i~i~~~~~~~~~~w~V~~~~~~HNH~  160 (690)
                      ||.-|+--.+.-++...-|-+|.|+.                      -||+|+=.|.+..  .++.-.++....+|||+
T Consensus        13 Gy~WRKYGQK~ikgs~~pRsYYrCt~----------------------~~C~a~K~Vqr~~--~d~~~~~vtY~G~H~h~   68 (71)
T d1wj2a_          13 GYRWRKYGQKVVKGNPYPRSYYKCTT----------------------PGCGVRKHVERAA--TDPKAVVTTYEGKHNHD   68 (71)
T ss_dssp             SSCBCCCEEECCTTCSSCEEEEEEEC----------------------SSCEEEEEEEEET--TTTSEEEEEEESCCSSC
T ss_pred             CCEECCCCCEECCCCCCCEEEEECCC----------------------CCCCCCCEEEEEC--CCCCEEEEEEEEEECCC
T ss_conf             75724237600259987108978451----------------------4798744288876--99999999983570898


Q ss_pred             C
Q ss_conf             9
Q 005579          161 L  161 (690)
Q Consensus       161 l  161 (690)
                      +
T Consensus        69 ~   69 (71)
T d1wj2a_          69 L   69 (71)
T ss_dssp             C
T ss_pred             C
T ss_conf             8