Citrus Sinensis ID: 005679

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680---
MEFEELREVVENIELVDGHAHNIVSLDSSFPFIQSFSEATGPALSYAPYSLSFKRNLKNIAELYGCDSSLQAVEEYRRAAGLQSICSICFEAANISAVLIDDGLKLDKKHGLDWHKSLVPFVGRILRIERLAEEILDQASPDGSIWTLDVFIETFLKQLRSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGVKDFASKDDMHQIYLKKSDAFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLSTRWRIPWQKQEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPNLWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPNRLL
ccHHHHHHHHcccccccccccccccccccccHHHHcccccccccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHccHHHHHHHHHHHccccEEEEEccccccccccHHHHHHHcccccEEEEEHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccEEEEEEEEEcccccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHccccEEEEccccccccccccccccccHHHHHccccccccEEEEEcccccHHHHHHHHHHcccEEEEcccccccccHHHHHHHHHHHHHccccccEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHcccccccEEEEEEEccccccccccccHHHHHHHHHHccccEEEcccccccccccccccccccccccEEEEccccccccccccccEEEEEEEEEccccccccccHHHHHHHHHHHHHHHcccEEEEEEcEEEEEEEEccccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccc
ccHHHHHHHHHccccHHccccHHccccccccHHHHHHHcccHHHHcccccHHHHHHHHHHHHHHcccccHHHHHHHHHHccHHHHHHHHHHHcccEEEEEcccccHccccccHHHHHcccHHHHEHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEccccccccccHHHHHHHHHHHHHcccccEcccccHHHHHHHHHHHHHHHccccEEEEccccccccccccccHHHHHHHHHHcccccccEEEEEcccccHHHHHHHHHHcccEEEEHHHHccHccHHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHccccEEEEEEEEEccEEEEEEEEcHHHHHHHHHccccHHHHHHHHHHcccccccccccccccccEEEccccccEEEcccccccEEEEEEEEcccccccccccHHHHHHHHHHHHHHcccEEEEccccEEEEEEEcccccccccEccccccccccccccccHHHHHHHHHHHHHcccEEEEcccccccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHcccEEEEccccccccccEEEcccccccccccHHHHHHHHHHHHHHHHHHHHccccccccc
MEFEELREVVENIelvdghahnivsldssfpfiqsfseatgpalsyapyslSFKRNLKNIAELYGCDSSLQAVEEYRRAAGLQSICSICFEAANISAVLiddglkldkkhgldwhkslvpfvgRILRIERLAEEIldqaspdgsiwTLDVFIETFLKQLRSAANKIVGLKSIAAYRsgleinphvtkkdaeeglaedlrsgkpvritnkSLIDYIFISSLEvaqfldlplqihtgfgdkdldlrlsnplHLRAILEDKRFSKCRFVLLhasypfskeasylAYVYPQVYLDFGLAIPKLSVQGMISSIKELLelaptkkvmfstdayaspetyfLGAKRAREVVFSVLRDTcidedlsvGEAIEVAKDIFALNAAQFYKINlgvkdfaskddmHQIYLkksdafesDVSLIRVIWVDasgqhrcrvvpvkrFNDIVTKYGVGLTFACMgmtsavdgpadgtnlsgtgeirlmpdlstrwripwqkQEEMIMAdmhlkpgepweycprEALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLRegkeewvpidftpycstaaydavSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLatfvpnlwqngenvfmasdssskhgmssVGEKFMAGVLHHLSSILAftapvpnrll
MEFEELREVVENIELVDGHAHNIVSLDSSFPFIQSFSEATGPALSYAPYSLSFKRNLKNIAELYGCDSSLQAVEEYRRAAGLQSICSICFEAANISAVLIDDGLKLDKKHGLDWHKSLVPFVGRILRIERLAEEILdqaspdgsIWTLDVFIETFLKQLRSAANKIVGLKSIAAyrsgleinphvtkkdaeeglaedlrsgkpvritNKSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGVKDFASKDDMHQIYLKKSDAFESDVSLIRVIWVdasgqhrcrvvpvkrfndIVTKYGVGLTFACMGMTSAVDGPADGTNLSGtgeirlmpdlstrWRIPWQKQEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATfvpnlwqngENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSilaftapvpnrll
MEFEELREVVENIELVDGHAHNIVSLDSSFPFIQSFSEATGPALSYAPYSLSFKRNLKNIAELYGCDSSLQAVEEYRRAAGLQSICSICFEAANISAVLIDDGLKLDKKHGLDWHKSLVPFVGRILRIERLAEEILDQASPDGSIWTLDVFIETFLKQLRSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGVKDFASKDDMHQIYLKKSDAFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLSTRWRIPWQKQEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPNLWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPNRLL
*******EVVENIELVDGHAHNIVSLDSSFPFIQSFSEATGPALSYAPYSLSFKRNLKNIAELYGCDSSLQAVEEYRRAAGLQSICSICFEAANISAVLIDDGLKLDKKHGLDWHKSLVPFVGRILRIERLAEEILDQASPDGSIWTLDVFIETFLKQLRSAANKIVGLKSIAAYRSGLEINPH******************PVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGVKDFASKDDMHQIYLKKSDAFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLSTRWRIPWQKQEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPNLWQNGENVFM***************KFMAGVLHHLSSILAFTA*******
***EELREVVENIELVDGHAHNIVSLDSSFPFIQSFSEATGPALSYAPYSLSFKRNLKNIAELYGCDSSLQAVEEYRRAAGLQSICSICFEAANISAVLIDDGLKLDKKHGLDWHKSLVPFVGRILRIERLAEEILDQASPDGSIWTLDVFIETFLKQLRSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGVKDFASKDD***I*L***DAFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLSTRWRIPWQKQEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPNLWQNGENVFMASDS****GMSSVGEKFMAGVLHHLSSILAFTAPVPNRLL
MEFEELREVVENIELVDGHAHNIVSLDSSFPFIQSFSEATGPALSYAPYSLSFKRNLKNIAELYGCDSSLQAVEEYRRAAGLQSICSICFEAANISAVLIDDGLKLDKKHGLDWHKSLVPFVGRILRIERLAEEILDQASPDGSIWTLDVFIETFLKQLRSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGVKDFASKDDMHQIYLKKSDAFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLSTRWRIPWQKQEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPNLWQNGENVFMAS********SSVGEKFMAGVLHHLSSILAFTAPVPNRLL
*EFEELREVVENIELVDGHAHNIVSLDSSFPFIQSFSEATGPALSYAPYSLSFKRNLKNIAELYGCDSSLQAVEEYRRAAGLQSICSICFEAANISAVLIDDGLKLDKKHGLDWHKSLVPFVGRILRIERLAEEILDQASPDGSIWTLDVFIETFLKQLRSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGVKDFASKDDMHQIYLKKSDAFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLSTRWRIPWQKQEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPNLWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPNRLL
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MEFEELREVVENIELVDGHAHNIVSLDSSFPFIQSFSEATGPALSYAPYSLSFKRNLKNIAELYGCDSSLQAVEEYRRAAGLQSICSICFEAANISAVLIDDGLKLDKKHGLDWHKSLVPFVGRILRIERLAEEILDQASPDGSIWTLDVFIETFLKQLRSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGVKDFASKDDMHQIYLKKSDAFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLSTRWRIPWQKQEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPNLWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPNRLL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query683 2.2.26 [Sep-21-2011]
P38094 865 Protein fluG OS=Emericell yes no 0.957 0.756 0.312 1e-84
P21154 446 Glutamine synthetase OS=M yes no 0.374 0.573 0.283 1e-23
Q86B00 499 Type-1 glutamine syntheta no no 0.412 0.565 0.262 1e-23
O59648 446 Glutamine synthetase OS=M yes no 0.371 0.569 0.275 4e-23
Q60182 454 Glutamine synthetase OS=M yes no 0.386 0.581 0.279 4e-22
O58097 443 Glutamine synthetase OS=P yes no 0.374 0.577 0.270 4e-22
P43386 456 Glutamine synthetase OS=H yes no 0.373 0.559 0.284 6e-22
Q05907 439 Glutamine synthetase OS=P yes no 0.367 0.571 0.276 2e-21
P45627 445 Glutamine synthetase OS=L N/A no 0.389 0.597 0.272 3e-20
O27612 442 Glutamine synthetase OS=M yes no 0.370 0.572 0.273 4e-20
>sp|P38094|FLUG_EMENI Protein fluG OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=fluG PE=1 SV=1 Back     alignment and function desciption
 Score =  315 bits (806), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 225/721 (31%), Positives = 354/721 (49%), Gaps = 67/721 (9%)

Query: 6   LREVVENIELVDGHAHNIVSLDSS-----FPFIQSFSEATGPALSYAPYSLSFKRNLKNI 60
           LR +++   L+D HAHN++S  ++     +PF Q  SEA G AL+ AP +LSF R    +
Sbjct: 7   LRHLIQTHPLIDNHAHNLLSQSAACKYAKYPFEQIISEAQGVALANAPSTLSFHRAASQL 66

Query: 61  AELYGCDSS----LQAVEEYRRAAGLQSICSICFEAANISAVLIDDGLKLDKKHGLDWHK 116
           A LY   SS    ++A  +       + +   C E   +  +L+DD L  +     DWH 
Sbjct: 67  ATLYQSSSSDWDSVRAARDQSVQRDYEGLIRKCLEGTQV--LLLDDLLTENDVELFDWHD 124

Query: 117 SLV-PFVGRILRIERLAEEILDQASPDGSI-------WTLDVFIETFLKQLRS------A 162
                   RI+RIE LA  +L Q    G +              E+F +   +      A
Sbjct: 125 RFTASATKRIVRIEALAASVLSQIVHGGPVPQDSSDLSAFQTLWESFSRNFSALVSDAIA 184

Query: 163 ANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRS------GKPVRITNKSLIDYIF 216
              +VG KS+  YR+GL++ P    +D E  +    R+        P R+ +K L D++ 
Sbjct: 185 DPAVVGFKSVICYRTGLDVQP-TDDRDTERLIRSFARTISQAAVSTP-RVEDKPLNDWLV 242

Query: 217 ISSLEVAQFLDL-----PLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHAS 271
             +L + +   +     PLQ+HTG GD D++L  SNP HL++++   ++ +  FVLLH+S
Sbjct: 243 RQTLNLLKAAKVTQPNKPLQLHTGLGDNDINLLKSNPAHLQSLI--AQYPEVDFVLLHSS 300

Query: 272 YPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPE 331
           YP+++EA YLA VYP VYLD G   P +S     S ++E LE+ P+ ++++STD +  PE
Sbjct: 301 YPYTREAGYLACVYPNVYLDLGEVFPMVSRDAQESILRESLEIVPSTRLLWSTDGHFFPE 360

Query: 332 TYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGVKDFASKD 391
           T++L  ++ R+ +  V  D   + D ++ +A++ A DI   N+ + Y++N      A+  
Sbjct: 361 TFWLANRQFRDALEKVFVDYVQNGDYTIEQAMQAAADILFHNSNRLYELNEQPPS-AALS 419

Query: 392 DMHQIY--LKKSDAFESDVSL---IRVIW---VDASGQHRCRVVPVKRFNDIVTK---YG 440
             HQ    +  +D  E  +     ++ +W   +D +   R R+ PV  F  IV K    G
Sbjct: 420 SGHQTVSRISSTDLLEKFIRSNPGVKYVWTQFIDYTATVRVRMFPVMEFAKIVRKQRRLG 479

Query: 441 VGL-TFACMGMTSAVDGPADGTNLSGTGEIRLMPDLST-RWRIPWQKQEEMIMADMHLKP 498
           + + TF  +     V G       S TG+  L+PDLST    +    +   +M     + 
Sbjct: 480 ISMATFWMLQDDEVVGG-------STTGQFYLIPDLSTLSPNVGIDSKSATVMTWWKSEQ 532

Query: 499 GEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVL--REGKEEWVP--IDFTP 554
           GE  E CPR  L  ++  LK+EF +    GFEIE   LK       G+E+W P   + + 
Sbjct: 533 GESLEECPRTNLLNINNKLKDEFGIQATCGFEIEVVFLKPTTDPSTGEEDWAPSVTNHSW 592

Query: 555 YCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTR 614
              T     + P+ +E+   L S+ I ++Q HAE+  GQFE  L       A D LI +R
Sbjct: 593 SQMTRETRRMLPLLEEIAETLASIGIHLQQFHAESAPGQFEFILPPDNPVAAVDTLIKSR 652

Query: 615 EVLRAVARKHGLLATFVPNLWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAF 674
           +V+  +  KHGL AT  P  + +      AS +      S+  E F+AGVL H  ++LAF
Sbjct: 653 QVIANIVEKHGLRATLYPRPYPSAAGT--ASHAHVSISPSTKEESFLAGVLQHYPAVLAF 710

Query: 675 T 675
           T
Sbjct: 711 T 711
May function as a GSI-related enzyme in synthesizing a small diffusible factor that acts as an extracellular signal directing asexual sporulation and perhaps other aspects of colony growth. May be involved in brlA activation (an early transcriptional regulator for conidiation specific gene).
Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321)
>sp|P21154|GLNA_METVO Glutamine synthetase OS=Methanococcus voltae GN=glnA PE=3 SV=1 Back     alignment and function description
>sp|Q86B00|GLNA1_DICDI Type-1 glutamine synthetase 1 OS=Dictyostelium discoideum GN=glnA1 PE=3 SV=1 Back     alignment and function description
>sp|O59648|GLNA_METMP Glutamine synthetase OS=Methanococcus maripaludis (strain S2 / LL) GN=glnA PE=3 SV=1 Back     alignment and function description
>sp|Q60182|GLNA_METJA Glutamine synthetase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=glnA PE=3 SV=1 Back     alignment and function description
>sp|O58097|GLNA_PYRHO Glutamine synthetase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=glnA PE=3 SV=1 Back     alignment and function description
>sp|P43386|GLNA_HALVD Glutamine synthetase OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=glnA PE=3 SV=2 Back     alignment and function description
>sp|Q05907|GLNA_PYRFU Glutamine synthetase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=glnA PE=3 SV=2 Back     alignment and function description
>sp|P45627|GLNA_LACDE Glutamine synthetase OS=Lactobacillus delbrueckii subsp. bulgaricus GN=glnA PE=3 SV=1 Back     alignment and function description
>sp|O27612|GLNA_METTH Glutamine synthetase OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=glnA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query683
225441137 843 PREDICTED: protein fluG-like [Vitis vini 0.994 0.805 0.707 0.0
297739992 840 unnamed protein product [Vitis vinifera] 0.989 0.804 0.697 0.0
394987256 843 glutamine synthetase [Camellia sinensis] 0.994 0.805 0.684 0.0
224069607 830 predicted protein [Populus trichocarpa] 0.978 0.804 0.697 0.0
449451064 841 PREDICTED: protein fluG-like [Cucumis sa 0.995 0.808 0.674 0.0
255556828 784 Protein fluG, putative [Ricinus communis 0.991 0.863 0.683 0.0
297816616 853 hypothetical protein ARALYDRAFT_485693 [ 0.995 0.797 0.644 0.0
145339441 852 glutamate-ammonia ligase-like protein [A 0.995 0.798 0.641 0.0
6630738 845 nodulin / glutamate-ammonia ligase-like 0.995 0.804 0.638 0.0
357146455 842 PREDICTED: protein fluG-like isoform 1 [ 0.992 0.805 0.618 0.0
>gi|225441137|ref|XP_002266164.1| PREDICTED: protein fluG-like [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1036 bits (2680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 492/695 (70%), Positives = 580/695 (83%), Gaps = 16/695 (2%)

Query: 2   EFEELREVVENIELVDGHAHNIVSLDSSFPFIQSFSEATGPALSYAPYSLSFKRNLKNIA 61
           ++ ELRE VE +ELVD HAHNIV+LDS+FPFI  FSEA G ALSYA +SL FKR+L+ IA
Sbjct: 3   KYAELREAVEKVELVDAHAHNIVALDSAFPFIGCFSEANGDALSYATHSLCFKRSLREIA 62

Query: 62  ELYGCDSSLQAVEEYRRAAGLQSICSICFEAANISAVLIDDGLKLDKKHGLDWHKSLVPF 121
           ELYG + SL  VEEYRR +GLQSI S CF+AA I+A+LIDDG+  DKKH + WH++  P 
Sbjct: 63  ELYGSEVSLSGVEEYRRCSGLQSITSTCFKAARITAILIDDGIDFDKKHDIQWHRNFTPI 122

Query: 122 VGRILRIERLAEEILDQASPDGSIWTLDVFIETFLKQLRSAANKIVGLKSIAAYRSGLEI 181
           VGRILRIE LAE+ILD+ +PDGS WTLDVF   F+ +L+S A+ I GLKSIAAYRSGLEI
Sbjct: 123 VGRILRIEHLAEKILDEEAPDGSPWTLDVFTAIFVGKLKSVADGISGLKSIAAYRSGLEI 182

Query: 182 NPHVTKKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDL 241
           N +V+++DAEEGLAE L +GKPVRITNK+ IDYIF  SLEVA   DLP+Q+HTGFGD+DL
Sbjct: 183 NTNVSRQDAEEGLAEVLYAGKPVRITNKNFIDYIFTRSLEVALCFDLPMQLHTGFGDRDL 242

Query: 242 DLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSV 301
           DLRL+NPLHLR +LEDKRFSKCR VLLHASYPFSKEASYLA VYPQVYLDFGLAIPKLS 
Sbjct: 243 DLRLANPLHLRTLLEDKRFSKCRIVLLHASYPFSKEASYLASVYPQVYLDFGLAIPKLST 302

Query: 302 QGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGE 361
            GMISS+KELLELAP KKVMFSTD YA PET++LGAK+AREVVF+VLRD CID DLS+ E
Sbjct: 303 HGMISSVKELLELAPIKKVMFSTDGYAFPETFYLGAKKAREVVFTVLRDACIDGDLSIPE 362

Query: 362 AIEVAKDIFALNAAQFYKINLGVKDFASKDDMHQIYLK-KSDAFESDVSLIRVIWVDASG 420
           A+E A+DIFA NA QFYK+N+ +K    K+ +    +   +++ ++D++L+R+IWVDASG
Sbjct: 363 AVEAAEDIFAKNAIQFYKLNVAMKSIDLKNAICPKLMSIGNNSSQNDITLVRIIWVDASG 422

Query: 421 QHRCRVVPVKRFNDIVTKYGVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLSTRWR 480
           Q RCRVVP +RF D+V K GVGLTFACMGM+SA+DGPADGTNLSG GE RL+PDLST+ R
Sbjct: 423 QQRCRVVPARRFYDVVLKNGVGLTFACMGMSSAIDGPADGTNLSGVGETRLVPDLSTKCR 482

Query: 481 IPWQKQEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVL 540
           IPW KQEEM++ADMHLKPG+PWEYCPREALR++S++LK+EFNLVLNAGFE+EFYLLK +L
Sbjct: 483 IPWAKQEEMVLADMHLKPGKPWEYCPREALRRISKVLKDEFNLVLNAGFEVEFYLLKRIL 542

Query: 541 REGKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGH 600
           REGKEEWVP D TPYCST+A+DA SP+F EVLA L SLN+ VEQLHAEAGKGQFEIALGH
Sbjct: 543 REGKEEWVPFDSTPYCSTSAFDAASPIFHEVLAALQSLNVPVEQLHAEAGKGQFEIALGH 602

Query: 601 TVAAKAADNLIFTREVLRAVARKHGLLATFVP---------------NLWQNGENVFMAS 645
           TV + +ADNLIFT EV++A AR+HGLLATFVP               +LW+NGENVFMAS
Sbjct: 603 TVCSCSADNLIFTHEVIKACARRHGLLATFVPKYTLDDIGSGSHVHISLWENGENVFMAS 662

Query: 646 DSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPN 680
              S +G+S VGE+FMAGVLHHL SILAFTAPVPN
Sbjct: 663 GQGSHYGISKVGEEFMAGVLHHLPSILAFTAPVPN 697

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297739992|emb|CBI30174.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|394987256|gb|AFN42875.1| glutamine synthetase [Camellia sinensis] Back     alignment and taxonomy information
>gi|224069607|ref|XP_002326385.1| predicted protein [Populus trichocarpa] gi|222833578|gb|EEE72055.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449451064|ref|XP_004143282.1| PREDICTED: protein fluG-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255556828|ref|XP_002519447.1| Protein fluG, putative [Ricinus communis] gi|223541310|gb|EEF42861.1| Protein fluG, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297816616|ref|XP_002876191.1| hypothetical protein ARALYDRAFT_485693 [Arabidopsis lyrata subsp. lyrata] gi|297322029|gb|EFH52450.1| hypothetical protein ARALYDRAFT_485693 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|145339441|ref|NP_190886.4| glutamate-ammonia ligase-like protein [Arabidopsis thaliana] gi|332645524|gb|AEE79045.1| glutamate-ammonia ligase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|6630738|emb|CAB64221.1| nodulin / glutamate-ammonia ligase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|357146455|ref|XP_003573998.1| PREDICTED: protein fluG-like isoform 1 [Brachypodium distachyon] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query683
TAIR|locus:2101983 852 NodGS "nodulin/glutamine synth 0.994 0.796 0.643 3.5e-242
ASPGD|ASPL0000074483 865 fluG [Emericella nidulans (tax 0.732 0.578 0.327 6.4e-85
DICTYBASE|DDB_G0280191440 DDB_G0280191 "amidohydrolase 2 0.254 0.395 0.449 1e-53
DICTYBASE|DDB_G0276835 499 glnA1 "glutamate-ammonia ligas 0.423 0.579 0.261 6.2e-21
TIGR_CMR|CHY_0712 443 CHY_0712 "glutamine synthetase 0.357 0.550 0.292 5.2e-19
TIGR_CMR|BA_3833 444 BA_3833 "glutamine synthetase, 0.332 0.511 0.287 1.3e-15
DICTYBASE|DDB_G0295755 521 glnA2 "glutamine synthetase ty 0.389 0.510 0.272 1.6e-15
TIGR_CMR|CHY_0704 442 CHY_0704 "glutamine synthetase 0.319 0.493 0.269 9.9e-15
ZFIN|ZDB-GENE-060312-26 668 lgsn "lengsin, lens protein wi 0.442 0.452 0.247 2.5e-14
TIGR_CMR|SPO_1825 433 SPO_1825 "glutamine synthetase 0.373 0.588 0.275 1.6e-13
TAIR|locus:2101983 NodGS "nodulin/glutamine synthase-like protein" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2334 (826.7 bits), Expect = 3.5e-242, P = 3.5e-242
 Identities = 455/707 (64%), Positives = 560/707 (79%)

Query:     1 MEFEELREVVENIELVDGHAHNIVSLDSSFPFIQSFSEATGPALSYAPYSLSFKRNLKNI 60
             MEF EL+E +E IELVD HAHNIVSLDSSFPFI +FSEA G AL++AP+SLSFKRNL+ I
Sbjct:     1 MEFSELKEAIEKIELVDAHAHNIVSLDSSFPFIGTFSEAAGDALTFAPHSLSFKRNLREI 60

Query:    61 AELYGCDSSLQAVEEYRRAAGLQSICSICFEAANISAVLIDDGLKLDKKHGLDWHKSLVP 120
             A+LYG + SL+AVEE+R+ +GL S  S CF+ A ISA+LIDDGLKLDKKH ++WH++ VP
Sbjct:    61 AQLYGTEVSLEAVEEHRKTSGLDSFTSKCFKEARISALLIDDGLKLDKKHDIEWHRNFVP 120

Query:   121 FVGRILRIERLAEEILDQASPDG----------SIWTLDVFIETFLKQLRSAANKIVGLK 170
             FVGR+LRIE LAE+IL++  P G           +W LD F +TF+++L S   +IV LK
Sbjct:   121 FVGRVLRIETLAEQILEEECPGGYFYGSESTEPPVWDLDSFTKTFVERLNSLVPEIVALK 180

Query:   171 SIAAYRSGLEINPHVTKKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPL 230
             +IAAYRSGL+I+ +V+K+ AE GL E LR+GKPVRI NK LIDYI   SLEVA   DLPL
Sbjct:   181 TIAAYRSGLDIDTYVSKEVAENGLVEVLRAGKPVRIGNKGLIDYILTISLEVAVRRDLPL 240

Query:   231 QIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYL 290
             QIHTGFGDKDLDLRLSNPLHLR +LEDKRF KCR VLLHA+YPFSKEAS+L+ VYPQVYL
Sbjct:   241 QIHTGFGDKDLDLRLSNPLHLRTLLEDKRFGKCRIVLLHAAYPFSKEASFLSSVYPQVYL 300

Query:   291 DFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRD 350
             DFGLA+PKLSV GM+SS+KELL+LA  KKVMFSTD YASPETY+LGAK+AREV+F VL D
Sbjct:   301 DFGLAVPKLSVHGMVSSVKELLDLASIKKVMFSTDGYASPETYYLGAKKAREVIFLVLSD 360

Query:   351 TCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGVKDFASKDDM--HQIYLKKSDAFESDV 408
              C   DLS+ EAI+ AKDIF+ N+  FYK+N+   D +S  ++   ++ +K+ D  E   
Sbjct:   361 ACASGDLSLMEAIDAAKDIFSRNSIGFYKLNIDT-DSSSPQNIISPKLKIKEPDVQEDSS 419

Query:   409 SLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACMGMTSAVDGPADGTNLSGTGE 468
             S +R+IWVD SGQ RCR V  +RFN  V K GVGLTFA MGMTS  DGPA+ + L+G GE
Sbjct:   420 SFVRIIWVDTSGQQRCRAVQAQRFNRSVKKNGVGLTFASMGMTSFTDGPAEESKLTGVGE 479

Query:   469 IRLMPDLSTRWRIPWQKQEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAG 528
             IRL+PDLST+  IPW KQE M++ADM LKPGE W YCPRE LR+V+++LK+EF+LV+NAG
Sbjct:   480 IRLVPDLSTKQTIPWTKQESMVLADMQLKPGEAWGYCPRETLRRVAKVLKDEFDLVMNAG 539

Query:   529 FEIEFYLLKSVLREGKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAE 588
             FE EFYLLK+V+REGKEE++P DF PYC+T+++DA SP+F +++  L SLNI VEQ HAE
Sbjct:   540 FENEFYLLKNVVREGKEEYMPFDFGPYCATSSFDAASPIFHDIVPALESLNIEVEQFHAE 599

Query:   589 AGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVP---------------N 633
             +GKGQFE++LGHT+A+ AADNL++TREV+R+VARK GLLATFVP               +
Sbjct:   600 SGKGQFEVSLGHTIASHAADNLVYTREVIRSVARKQGLLATFVPKYDYCDIGSGSHVHLS 659

Query:   634 LWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPN 680
             LW+NGENVF AS++SS HG+SSVGE+FMAGVL HL SILA  AP+PN
Sbjct:   660 LWKNGENVFPASNNSSSHGISSVGEEFMAGVLFHLPSILAIIAPLPN 706
GO:0003824 "catalytic activity" evidence=IEA
GO:0004356 "glutamate-ammonia ligase activity" evidence=IEA;ISS;IDA
GO:0005737 "cytoplasm" evidence=ISM
GO:0006542 "glutamine biosynthetic process" evidence=IEA
GO:0006807 "nitrogen compound metabolic process" evidence=IEA
GO:0008152 "metabolic process" evidence=IEA
GO:0009399 "nitrogen fixation" evidence=ISS
GO:0009737 "response to abscisic acid stimulus" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
GO:0008017 "microtubule binding" evidence=IPI
GO:0009617 "response to bacterium" evidence=IEP
GO:0010311 "lateral root formation" evidence=IMP
GO:0043015 "gamma-tubulin binding" evidence=IDA
GO:0043621 "protein self-association" evidence=IDA
GO:0048829 "root cap development" evidence=IMP
GO:0002679 "respiratory burst involved in defense response" evidence=RCA
GO:0006569 "tryptophan catabolic process" evidence=RCA
GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA
GO:0010200 "response to chitin" evidence=RCA
ASPGD|ASPL0000074483 fluG [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0280191 DDB_G0280191 "amidohydrolase 2 family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0276835 glnA1 "glutamate-ammonia ligase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_0712 CHY_0712 "glutamine synthetase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|BA_3833 BA_3833 "glutamine synthetase, type I" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0295755 glnA2 "glutamine synthetase type I" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_0704 CHY_0704 "glutamine synthetase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060312-26 lgsn "lengsin, lens protein with glutamine synthetase domain" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_1825 SPO_1825 "glutamine synthetase family protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer4.1.1LOW CONFIDENCE prediction!
4th Layer4.1.1.45LOW CONFIDENCE prediction!
3rd Layer3.5.2LOW CONFIDENCE prediction!
3rd Layer6.3.1.2LOW CONFIDENCE prediction!
3rd Layer6.3.1LOW CONFIDENCE prediction!
3rd Layer3.5.2.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00280245
hypothetical protein (831 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query683
COG0174 443 COG0174, GlnA, Glutamine synthetase [Amino acid tr 2e-55
pfam00120259 pfam00120, Gln-synt_C, Glutamine synthetase, catal 5e-44
TIGR03105 435 TIGR03105, gln_synth_III, glutamine synthetase, ty 2e-33
TIGR00653 459 TIGR00653, GlnA, glutamine synthetase, type I 3e-32
pfam04909272 pfam04909, Amidohydro_2, Amidohydrolase 1e-21
COG2159293 COG2159, COG2159, Predicted metal-dependent hydrol 3e-15
COG3968 724 COG3968, COG3968, Uncharacterized protein related 6e-07
PRK09469 469 PRK09469, glnA, glutamine synthetase; Provisional 1e-04
>gnl|CDD|223252 COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism] Back     alignment and domain information 
 Score =  195 bits (498), Expect = 2e-55
 Identities = 80/299 (26%), Positives = 131/299 (43%), Gaps = 27/299 (9%)

Query: 399 KKSDAFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACMGMTSAVDGPA 458
                 E+ V  + + + D +G  R + +P ++   +            +   S++ G  
Sbjct: 6   VLKLLKENGVKFVDLRFTDLNGVLRGKTIPAEKPVSV---LAQLFEGGVVFDGSSIAG-F 61

Query: 459 DGTNLSGTGEIRLMPDLSTRWRIPWQKQEE-MIMADMHLKPGEPWEYCPREALRKVSRLL 517
           +G       ++ L PDLST    PW++     ++ D++   G P+   PR  L++    L
Sbjct: 62  EGIG---ESDMVLKPDLSTLVVDPWREGPTARVLCDVYDPDGTPYPRDPRSVLKRALARL 118

Query: 518 KEEFNLVLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHS 577
           K+E       G E+EF+L         +   P D   Y   A  D      ++++  L +
Sbjct: 119 KDEGLAPAVVGPELEFFLFDRD-GRDPDGGRPADKGGYFDVAPLDEAEDFRRDIVEALEA 177

Query: 578 LNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVP----- 632
             I +E +H E   GQFEI L    A KAAD ++  + V++ VA KHGL ATF+P     
Sbjct: 178 AGIEIEAIHHEVAPGQFEINLRFDDALKAADQIVIFKYVVKEVAEKHGLTATFMPKPFFG 237

Query: 633 ----------NLW-QNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPN 680
                     +LW ++G N+F   D     G+S     F+ G+L H  ++ A TAP  N
Sbjct: 238 DNGSGMHVHQSLWDKDGGNLFA--DEDGYAGLSETALHFIGGILKHAPALTAITAPTVN 294

Length = 443
>gnl|CDD|215731 pfam00120, Gln-synt_C, Glutamine synthetase, catalytic domain Back     alignment and domain information
>gnl|CDD|234109 TIGR03105, gln_synth_III, glutamine synthetase, type III Back     alignment and domain information
>gnl|CDD|233073 TIGR00653, GlnA, glutamine synthetase, type I Back     alignment and domain information
>gnl|CDD|218322 pfam04909, Amidohydro_2, Amidohydrolase Back     alignment and domain information
>gnl|CDD|225070 COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only] Back     alignment and domain information
>gnl|CDD|226477 COG3968, COG3968, Uncharacterized protein related to glutamine synthetase [General function prediction only] Back     alignment and domain information
>gnl|CDD|181884 PRK09469, glnA, glutamine synthetase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 683
TIGR00653 460 GlnA glutamine synthetase, type I. Alternate name: 100.0
COG0174 443 GlnA Glutamine synthetase [Amino acid transport an 100.0
PRK09469 469 glnA glutamine synthetase; Provisional 100.0
TIGR03105 435 gln_synth_III glutamine synthetase, type III. This 100.0
PRK02925466 glucuronate isomerase; Reviewed 100.0
COG1904463 UxaC Glucuronate isomerase [Carbohydrate transport 100.0
PF02614462 UxaC: Glucuronate isomerase; InterPro: IPR003766 U 100.0
PLN02284354 glutamine synthetase 100.0
PLN03036432 glutamine synthetase; Provisional 100.0
PF00120259 Gln-synt_C: Glutamine synthetase, catalytic domain 100.0
COG2159293 Predicted metal-dependent hydrolase of the TIM-bar 99.89
KOG0683380 consensus Glutamine synthetase [Amino acid transpo 99.83
PF04909273 Amidohydro_2: Amidohydrolase; InterPro: IPR006992 99.74
PF0395184 Gln-synt_N: Glutamine synthetase, beta-Grasp domai 99.39
cd01311263 PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC) 99.38
COG3618279 Predicted metal-dependent hydrolase of the TIM-bar 99.21
cd01310251 TatD_DNAse TatD like proteins; E.coli TatD is a cy 99.07
COG3968 724 Uncharacterized protein related to glutamine synth 99.04
TIGR00010252 hydrolase, TatD family. Several genomes have multi 98.66
KOG4245297 consensus Predicted metal-dependent hydrolase of t 97.98
PRK10812265 putative DNAse; Provisional 97.95
cd00530293 PTE Phosphotriesterase (PTE) catalyzes the hydroly 97.93
COG0418344 PyrC Dihydroorotase [Nucleotide transport and meta 97.84
PRK11449258 putative deoxyribonuclease YjjV; Provisional 97.84
PF01026255 TatD_DNase: TatD related DNase The Pfam entry find 97.69
COG0084256 TatD Mg-dependent DNase [DNA replication, recombin 97.59
PRK09875292 putative hydrolase; Provisional 97.41
cd01294335 DHOase Dihydroorotase (DHOase) catalyzes the rever 97.31
PRK10425258 DNase TatD; Provisional 97.23
COG1099254 Predicted metal-dependent hydrolases with the TIM- 97.14
TIGR02050 287 gshA_cyan_rel uncharacterized enzyme. This family 96.51
PRK05451345 dihydroorotase; Provisional 96.44
PRK13516 373 gamma-glutamyl:cysteine ligase; Provisional 96.42
PRK13517 373 carboxylate-amine ligase; Provisional 96.41
PF02126308 PTE: Phosphotriesterase family; InterPro: IPR00155 96.31
cd01292275 metallo-dependent_hydrolases Superfamily of metall 96.3
PLN02599364 dihydroorotase 95.98
TIGR00856341 pyrC_dimer dihydroorotase, homodimeric type. This 95.68
PRK13515 371 carboxylate-amine ligase; Provisional 95.66
PLN02611 482 glutamate--cysteine ligase 95.14
COG1831285 Predicted metal-dependent hydrolase (urease superf 95.1
COG2355313 Zn-dependent dipeptidase, microsomal dipeptidase h 94.93
PRK13518 357 carboxylate-amine ligase; Provisional 94.53
TIGR01436 446 glu_cys_lig_pln glutamate--cysteine ligase, plant 93.89
TIGR02048 376 gshA_cyano glutamate--cysteine ligase, cyanobacter 93.81
cd01297415 D-aminoacylase D-aminoacylases (N-acyl-D-Amino aci 93.68
cd01302337 Cyclic_amidohydrolases Cyclic amidohydrolases, inc 93.56
KOG3020296 consensus TatD-related DNase [Replication, recombi 93.54
cd01314447 D-HYD D-hydantoinases (D-HYD) also called dihydrop 93.08
PF04107 288 GCS2: Glutamate-cysteine ligase family 2(GCS2); In 92.19
KOG2902344 consensus Dihydroorotase [Nucleotide transport and 92.06
TIGR01975389 isoAsp_dipep isoaspartyl dipeptidase IadA. The L-i 91.95
cd01301309 rDP_like renal dipeptidase (rDP), best studied in 91.74
PF01244320 Peptidase_M19: Membrane dipeptidase (Peptidase fam 91.03
PRK09357423 pyrC dihydroorotase; Validated 89.5
COG2170 369 Uncharacterized conserved protein [Function unknow 89.12
cd01307338 Met_dep_hydrolase_B Metallo-dependent hydrolases, 89.1
PLN02942486 dihydropyrimidinase 88.47
cd01309359 Met_dep_hydrolase_C Metallo-dependent hydrolases, 88.25
TIGR03444 390 gshA_related glutamate--cysteine ligase family pro 87.68
COG1735316 Php Predicted metal-dependent hydrolase with the T 87.37
PLN02795505 allantoinase 86.84
cd01315447 L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinas 84.89
TIGR00857411 pyrC_multi dihydroorotase, multifunctional complex 84.28
PRK07369418 dihydroorotase; Provisional 82.11
cd01299342 Met_dep_hydrolase_A Metallo-dependent hydrolases, 80.41
>TIGR00653 GlnA glutamine synthetase, type I Back     alignment and domain information 
Probab=100.00  E-value=2.1e-60  Score=525.66  Aligned_cols=271  Identities=28%  Similarity=0.438  Sum_probs=238.0

Q ss_pred             hhhccCCceEEEEEEecCCCCceeEEEechhhhHHHhhcCccccccccccccccCCCCCCCCCCCCccEEEEeecCCcee
Q 005679          401 SDAFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLSTRWR  480 (683)
Q Consensus       401 ~~~~~~~i~~V~~~~~D~~G~~R~k~vp~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~~~~~~~~gd~~l~PD~~Tl~~  480 (683)
                      ..+++++|+||+++|+|++|++|+|.||+++|.+.+.++|++++.+++.      +.    ...+.+|++++||++|+++
T Consensus         5 ~~l~~~~i~~v~~~~~Dl~G~~rgk~vp~~~~~~~~~~~G~~~~~~~~~------~~----~~~~~~D~~l~PD~~Tl~~   74 (460)
T TIGR00653         5 KLIKEENVKFVDLRFTDIKGKPQHVEIPASALDKEAFEEGIMFDGSSIR------GF----QGIEESDMLLKPDPSTAVI   74 (460)
T ss_pred             HHHHhCCCcEEEEEEECCCCCEeeEEEeHHHhhHHHhcCCeeccccccc------cc----ccCCCCcEEEeccCCccee
Confidence            3456689999999999999999999999999975334689988876541      11    0135679999999999999


Q ss_pred             ccCCC-CcceEEEEeecC-CCCcCCCChHHHHHHHHHHHHHhcCCeeeeeeeeEEEEEeecccC----------------
Q 005679          481 IPWQK-QEEMIMADMHLK-PGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLRE----------------  542 (683)
Q Consensus       481 ~pw~~-~~a~v~~d~~~~-~g~p~~~cPR~~L~r~~~~~~~~~G~~~~~g~E~EF~l~~~~~~~----------------  542 (683)
                      +||.+ ++++|+||+++. ||+|++.|||++|+|++++++++.|+++++|+|+|||||+.....                
T Consensus        75 ~pw~~~~~a~v~~d~~~~~dg~p~~~~PR~~L~r~~~~l~~~~G~~~~~g~E~EF~l~~~~~~~~~~~~~~~~~~~~~~~  154 (460)
T TIGR00653        75 DPWRAEKTLRVICDVYEPFTGEPYERDPRSIAKRAEEYLKSGIGDTAYFGPEPEFFLFDSVEFGSLANGSFYEVDSEEGR  154 (460)
T ss_pred             ccCCCCCcEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHhCCCCceeEEcceEEEEEecCccCcccccceeeecccccc
Confidence            99965 589999999998 999999999999999999998678999999999999999852211                


Q ss_pred             -----CCCCcccCCCCCcccCCcccchHHHHHHHHHHHHhCCCceeEeeccCCCCceEEecCcChHHHHHHHHHHHHHHH
Q 005679          543 -----GKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVL  617 (683)
Q Consensus       543 -----~~~~~~p~~~~~~~~~~~~~~~~~~~~ei~~~l~~~Gi~ve~~h~E~~pGQ~Ei~l~~~~~l~aaD~~~~~k~~i  617 (683)
                           +...+.|.+.++||+..+++...+++++|++.|+++||+|+++|+|+|||||||++.|.++|+|||+++++|++|
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gi~v~~~~~E~gpGQ~Ei~l~~~~~l~aAD~~~~~k~~i  234 (460)
T TIGR00653       155 WNEESGNRGYKPRDKGGYFPVAPTDTAVDIRREMVLYLEQLGFDVEVHHHEVATGQHEIDFKFDTLLKTADDIQTYKYVV  234 (460)
T ss_pred             ccccCCcCCCcccCCccccCCCCcccHHHHHHHHHHHHHHcCCCceeeecCcCCCceeEecCCCCHHHHHHHHHHHHHHH
Confidence                 112345666666888888889999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCeEEeeec---------------ccCCCCcccccCCCCCCCCCcHHHHHHHHHHHHHHHHhHhhhcCCCCCC
Q 005679          618 RAVARKHGLLATFVPN---------------LWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPNRL  682 (683)
Q Consensus       618 k~vA~~~G~~ATFmpK---------------l~~~g~N~f~~~~~~~~~~lS~~~~~fiaGiL~h~~al~a~~~Pt~NSY  682 (683)
                      |+||++||+.||||||               ||++|+|+|.  +++++.+||+++++||||||+|++++++|++||+|||
T Consensus       235 k~vA~~~G~~ATFmpKP~~~~~GSG~H~H~Sl~d~g~n~F~--d~~~~~~lS~~~~~fiaGiL~h~~~l~a~~~PtvNSY  312 (460)
T TIGR00653       235 KNVARKHGKTATFMPKPLFGDNGSGMHCHQSLWKDGENLFA--GEEGYAGLSETALYYIGGILKHAKALAAFTNPTVNSY  312 (460)
T ss_pred             HHHHHHhCCEEEEecccCCCCCcCceeEEECccCCCeeccC--CCCCCcccCHHHHHHHHHHHHHHHHhhhHhcCCCcch
Confidence            9999999999999999               7888999998  4445567999999999999999999999999999999


Q ss_pred             C
Q 005679          683 L  683 (683)
Q Consensus       683 ~  683 (683)
                      +
T Consensus       313 k  313 (460)
T TIGR00653       313 K  313 (460)
T ss_pred             h
Confidence            6

Alternate name: glutamate--ammonia ligase. This model represents the dodecameric form, which can be subdivided into 1-alpha and 1-beta forms. The phylogeny of the 1-alpha and 1-beta forms appears polyphyletic. E. coli, Synechocystis PCC6803, Aquifex aeolicus, and the crenarcheon Sulfolobus acidocaldarius have form 1-beta, while Bacillus subtilis, Thermotoga maritima, and various euryarchaea has form 1-alpha. The 1-beta dodecamer from the crenarcheon Sulfolobus acidocaldarius differs from that in E. coli in that it is not regulated by adenylylation.
>COG0174 GlnA Glutamine synthetase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK09469 glnA glutamine synthetase; Provisional Back     alignment and domain information
>TIGR03105 gln_synth_III glutamine synthetase, type III Back     alignment and domain information
>PRK02925 glucuronate isomerase; Reviewed Back     alignment and domain information
>COG1904 UxaC Glucuronate isomerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02614 UxaC: Glucuronate isomerase; InterPro: IPR003766 Uronate isomerase (also known as glucuronate isomerase) catalyses the reaction D-glucuronate to D-fructuronate and also converts D-galacturonate to D-tagaturonate [] Back     alignment and domain information
>PLN02284 glutamine synthetase Back     alignment and domain information
>PLN03036 glutamine synthetase; Provisional Back     alignment and domain information
>PF00120 Gln-synt_C: Glutamine synthetase, catalytic domain; InterPro: IPR008146 Glutamine synthetase (6 Back     alignment and domain information
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only] Back     alignment and domain information
>KOG0683 consensus Glutamine synthetase [Amino acid transport and metabolism] Back     alignment and domain information
>PF04909 Amidohydro_2: Amidohydrolase; InterPro: IPR006992 These proteins are related to the metal-dependent hydrolase superfamily [] Back     alignment and domain information
>PF03951 Gln-synt_N: Glutamine synthetase, beta-Grasp domain; InterPro: IPR008147 Glutamine synthetase (6 Back     alignment and domain information
>cd01311 PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC) hydrolase hydrolyzes PDC to yield 4-oxalomesaconic acid (OMA) or its tautomer, 4-carboxy-2-hydroxymuconic acid (CHM) Back     alignment and domain information
>COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only] Back     alignment and domain information
>cd01310 TatD_DNAse TatD like proteins; E Back     alignment and domain information
>COG3968 Uncharacterized protein related to glutamine synthetase [General function prediction only] Back     alignment and domain information
>TIGR00010 hydrolase, TatD family Back     alignment and domain information
>KOG4245 consensus Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only] Back     alignment and domain information
>PRK10812 putative DNAse; Provisional Back     alignment and domain information
>cd00530 PTE Phosphotriesterase (PTE) catalyzes the hydrolysis of organophosphate nerve agents, including the chemical warfare agents VX, soman, and sarin as well as the insecticide paraoxon Back     alignment and domain information
>COG0418 PyrC Dihydroorotase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK11449 putative deoxyribonuclease YjjV; Provisional Back     alignment and domain information
>PF01026 TatD_DNase: TatD related DNase The Pfam entry finds members not in the Prosite definition Back     alignment and domain information
>COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair] Back     alignment and domain information
>PRK09875 putative hydrolase; Provisional Back     alignment and domain information
>cd01294 DHOase Dihydroorotase (DHOase) catalyzes the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in the pyrimidine biosynthesis Back     alignment and domain information
>PRK10425 DNase TatD; Provisional Back     alignment and domain information
>COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold [General function prediction only] Back     alignment and domain information
>TIGR02050 gshA_cyan_rel uncharacterized enzyme Back     alignment and domain information
>PRK05451 dihydroorotase; Provisional Back     alignment and domain information
>PRK13516 gamma-glutamyl:cysteine ligase; Provisional Back     alignment and domain information
>PRK13517 carboxylate-amine ligase; Provisional Back     alignment and domain information
>PF02126 PTE: Phosphotriesterase family; InterPro: IPR001559 Synonym(s): Paraoxonase, A-esterase, Aryltriphosphatase, Phosphotriesterase, Paraoxon hydrolase Bacteria such as Brevundimonas diminuta (Pseudomonas diminuta) harbour a plasmid that carries the gene for Aryldialkylphosphatase (3 Back     alignment and domain information
>cd01292 metallo-dependent_hydrolases Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site Back     alignment and domain information
>PLN02599 dihydroorotase Back     alignment and domain information
>TIGR00856 pyrC_dimer dihydroorotase, homodimeric type Back     alignment and domain information
>PRK13515 carboxylate-amine ligase; Provisional Back     alignment and domain information
>PLN02611 glutamate--cysteine ligase Back     alignment and domain information
>COG1831 Predicted metal-dependent hydrolase (urease superfamily) [General function prediction only] Back     alignment and domain information
>COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog [Amino acid transport and metabolism] Back     alignment and domain information
>PRK13518 carboxylate-amine ligase; Provisional Back     alignment and domain information
>TIGR01436 glu_cys_lig_pln glutamate--cysteine ligase, plant type Back     alignment and domain information
>TIGR02048 gshA_cyano glutamate--cysteine ligase, cyanobacterial, putative Back     alignment and domain information
>cd01297 D-aminoacylase D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics Back     alignment and domain information
>cd01302 Cyclic_amidohydrolases Cyclic amidohydrolases, including hydantoinase, dihydropyrimidinase, allantoinase, and dihydroorotase, are involved in the metabolism of pyrimidines and purines, sharing the property of hydrolyzing the cyclic amide bond of each substrate to the corresponding N-carbamyl amino acids Back     alignment and domain information
>KOG3020 consensus TatD-related DNase [Replication, recombination and repair] Back     alignment and domain information
>cd01314 D-HYD D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin Back     alignment and domain information
>PF04107 GCS2: Glutamate-cysteine ligase family 2(GCS2); InterPro: IPR006336 Also known as gamma-glutamylcysteine synthetase and gamma-ECS (6 Back     alignment and domain information
>KOG2902 consensus Dihydroorotase [Nucleotide transport and metabolism] Back     alignment and domain information
>TIGR01975 isoAsp_dipep isoaspartyl dipeptidase IadA Back     alignment and domain information
>cd01301 rDP_like renal dipeptidase (rDP), best studied in mammals and also called membrane or microsomal dipeptidase, is a membrane-bound glycoprotein hydrolyzing dipeptides and is involved in hydrolytic metabolism of penem and carbapenem beta-lactam antibiotics Back     alignment and domain information
>PF01244 Peptidase_M19: Membrane dipeptidase (Peptidase family M19); InterPro: IPR008257 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PRK09357 pyrC dihydroorotase; Validated Back     alignment and domain information
>COG2170 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>cd01307 Met_dep_hydrolase_B Metallo-dependent hydrolases, subgroup B is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site Back     alignment and domain information
>PLN02942 dihydropyrimidinase Back     alignment and domain information
>cd01309 Met_dep_hydrolase_C Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site Back     alignment and domain information
>TIGR03444 gshA_related glutamate--cysteine ligase family protein Back     alignment and domain information
>COG1735 Php Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only] Back     alignment and domain information
>PLN02795 allantoinase Back     alignment and domain information
>cd01315 L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology) Back     alignment and domain information
>TIGR00857 pyrC_multi dihydroorotase, multifunctional complex type Back     alignment and domain information
>PRK07369 dihydroorotase; Provisional Back     alignment and domain information
>cd01299 Met_dep_hydrolase_A Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query683
2qpx_A376 Crystal Structure Of Putative Metal-Dependent Hydro 9e-28
4hpp_A 443 Crystal Structure Of Novel Glutamine Synthase Homol 6e-13
3ng0_A 473 Crystal Structure Of Glutamine Synthetase From Syne 2e-12
2bvc_A 486 Crystal Structure Of Mycobacterium Tuberculosis Glu 1e-08
1hto_A 477 Crystallographic Structure Of A Relaxed Glutamine S 1e-08
1f52_A 468 Crystal Structure Of Glutamine Synthetase From Salm 2e-06
2gls_A 469 Refined Atomic Model Of Glutamine Synthetase At 3.5 2e-06
>pdb|2QPX|A Chain A, Crystal Structure Of Putative Metal-Dependent Hydrolase (Yp_805737.1) From Lactobacillus Casei Atcc 334 At 1.40 A Resolution Length = 376 Back     alignment and structure 
Iteration: 1

 Score =  122 bits (305), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 171/355 (48%), Gaps = 34/355 (9%)
Query: 4   EELREVVENIELVDGHAHNIV-----SLDSSFPFIQSFSEATGPALSYAPYSLSFKRNLK 58
           ++L E V+ + L+D H H ++     + D     + + ++   P L+     L++   L 
Sbjct: 3   DDLSEFVDQVPLLDHHCHFLIDGKVPNRDDRLAQVSTEADKDYP-LADTKNRLAYHGFLA 61
Query: 59  NIAELYGCDSS--LQAVEEYRRAAGLQSICSICFEAANISAVLIDDGLKLDKK-HGLDWH 115
            +A+ +  D++  L A  +     G  +     F   +   +LID G   D     LD  
Sbjct: 62  -LAKEFALDANNPLAAXND----PGYATYNHRIFGHFHFKELLIDTGFVPDDPILDLDQT 116
Query: 116 KSLVPF-VGRILRIERLAEEILDQASPDGSIWTLDVFIETFLKQLRSA-ANKIVGLKSIA 173
             LV   V  I R+E  AE+   +     + W      + F   ++ A A+  VG  SIA
Sbjct: 117 AELVGIPVKAIYRLETHAEDFXLEHDNFAAWW------QAFSNDVKQAKAHGFVGFXSIA 170
Query: 174 AYRSGLEINPHVTKKDAEEGLAEDLRSGKPVRITNKSLIDYIF--ISSLEVAQFLDLPLQ 231
           AYR GL + P V   +A  G      SG+  R+T+K LIDY    ++   +AQ  D PLQ
Sbjct: 171 AYRVGLHLEP-VNVIEAAAGFDTWKHSGEK-RLTSKPLIDYXLYHVAPFIIAQ--DXPLQ 226
Query: 232 IHTGFGDKDLDLRLSNPLHLRAILEDKRFSK--CRFVLLHASYPFSKEASYLAYVYPQVY 289
            H G+GD D D  L NPL  R  L  K F+K   + VLLH  YP+ +EA YLA V+P +Y
Sbjct: 227 FHVGYGDADTDXYLGNPLLXRDYL--KAFTKKGLKVVLLHC-YPYHREAGYLASVFPNLY 283
Query: 290 LDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVV 344
            D  L +  L   G      E +ELAP  +++F++DA   PE Y L A++ ++ +
Sbjct: 284 FDISL-LDNLGPSGASRVFNEAVELAPYTRILFASDASTYPEXYGLAARQFKQAL 337
>pdb|4HPP|A Chain A, Crystal Structure Of Novel Glutamine Synthase Homolog Length = 443 Back     alignment and structure
>pdb|3NG0|A Chain A, Crystal Structure Of Glutamine Synthetase From Synechocystis Sp. Pcc 6803 Length = 473 Back     alignment and structure
>pdb|2BVC|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Glutamine Synthetase In Complex With A Transition State Mimic Length = 486 Back     alignment and structure
>pdb|1HTO|A Chain A, Crystallographic Structure Of A Relaxed Glutamine Synthetase From Mycobacterium Tuberculosis Length = 477 Back     alignment and structure
>pdb|1F52|A Chain A, Crystal Structure Of Glutamine Synthetase From Salmonella Typhimurium Co-Crystallized With Adp Length = 468 Back     alignment and structure
>pdb|2GLS|A Chain A, Refined Atomic Model Of Glutamine Synthetase At 3.5 Angstroms Resolution Length = 469 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query683
2qpx_A376 Predicted metal-dependent hydrolase of the TIM-BA; 1e-106
3qaj_A 444 Glutamine synthetase; AMP-PCP, ACP, ligase; HET: G 3e-36
2j9i_A 421 Glutamate-ammonia ligase domain-containing protein 2e-35
2bvc_A 486 Glutamine synthetase 1; ligase, transition state m 1e-28
3ng0_A 473 Glutamine synthetase; GSI, nitrogen metabolism, sy 2e-27
1f52_A 468 Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 3e-27
3o6x_A 729 Glutamine synthetase; type III, beta barrel,dodeca 1e-19
2d3a_A356 Glutamine synthetase; ligase; HET: P3S ADP; 2.63A 1e-18
2ojw_A384 Glutamine synthetase; amino-acid biosynthesis, lig 6e-17
3fky_A370 Glutamine synthetase; beta-grAsp, catalytic domain 1e-16
3irs_A291 Uncharacterized protein BB4693; structural genomic 9e-15
3cjp_A272 Predicted amidohydrolase, dihydroorotase family; s 1e-12
2qee_A437 BH0493 protein; amidohydrolase, structural genomic 3e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-05
3ovg_A363 Amidohydrolase; structural genomics, PSI-2, protei 2e-05
3ij6_A312 Uncharacterized metal-dependent hydrolase; structu 2e-05
>2qpx_A Predicted metal-dependent hydrolase of the TIM-BA; YP_805737.1, putative metal-dependent hydrolase; HET: KCX MSE; 1.40A {Lactobacillus casei} Length = 376 Back     alignment and structure
 Score =  327 bits (838), Expect = e-106
 Identities = 109/389 (28%), Positives = 172/389 (44%), Gaps = 23/389 (5%)

Query: 4   EELREVVENIELVDGHAHNIVSLD---SSFPFIQSFSEATGP-ALSYAPYSLSFKRNLKN 59
           ++L E V+ + L+D H H ++            Q  +EA     L+     L++   L  
Sbjct: 3   DDLSEFVDQVPLLDHHCHFLIDGKVPNRDDRLAQVSTEADKDYPLADTKNRLAYHGFLA- 61

Query: 60  IAELYGCDSSLQAVEEYRRAAGLQSICSICFEAANISAVLIDDGLKLDKK-HGLDWHKSL 118
           +A+ +  D+            G  +     F   +   +LID G   D     LD    L
Sbjct: 62  LAKEFALDA--NNPLAAMNDPGYATYNHRIFGHFHFKELLIDTGFVPDDPILDLDQTAEL 119

Query: 119 VPF-VGRILRIERLAEEILDQASPDGSIWTLDVFIETFLKQLRSA-ANKIVGLKSIAAYR 176
           V   V  I R+E  AE+ + +            + + F   ++ A A+  VG KSIAAYR
Sbjct: 120 VGIPVKAIYRLETHAEDFMLEHDN------FAAWWQAFSNDVKQAKAHGFVGFKSIAAYR 173

Query: 177 SGLEINPHVTKKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGF 236
            GL + P V   +A  G      SG+  R+T+K LIDY+           D+PLQ H G+
Sbjct: 174 VGLHLEP-VNVIEAAAGFDTWKHSGEK-RLTSKPLIDYMLYHVAPFIIAQDMPLQFHVGY 231

Query: 237 GDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAI 296
           GD D D+ L NPL +R  L+       + VLLH  YP+ +EA YLA V+P +Y D  L +
Sbjct: 232 GDADTDMYLGNPLLMRDYLKAFTKKGLKVVLLHC-YPYHREAGYLASVFPNLYFDISL-L 289

Query: 297 PKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDED 356
             L   G      E +ELAP  +++F++DA   PE Y L A++ ++ + +          
Sbjct: 290 DNLGPSGASRVFNEAVELAPYTRILFASDASTYPEMYGLAARQFKQALVAHFNQ---LPF 346

Query: 357 LSVGEAIEVAKDIFALNAAQFYKINLGVK 385
           + + +       I    +A+ Y     ++
Sbjct: 347 VDLAQKKAWINAICWQTSAKLYHQERELR 375
>2j9i_A Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus} Length = 421 Back     alignment and structure
>2bvc_A Glutamine synthetase 1; ligase, transition state mimic; HET: P3S ADP; 2.1A {Mycobacterium tuberculosis} SCOP: d.15.9.1 d.128.1.1 PDB: 2wgs_A* 2whi_A* 3zxr_A* 3zxv_A* 1hto_A* 1htq_A* Length = 486 Back     alignment and structure
>3ng0_A Glutamine synthetase; GSI, nitrogen metabolism, synec ligase; HET: ANP; 2.80A {Synechocystis SP} Length = 473 Back     alignment and structure
>1f52_A Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 2.49A {Salmonella typhimurium} SCOP: d.15.9.1 d.128.1.1 PDB: 1f1h_A* 1fpy_A* 1lgr_A* 2lgs_A* 2gls_A Length = 468 Back     alignment and structure
>3o6x_A Glutamine synthetase; type III, beta barrel,dodecamer, ligas; HET: P3S ADP; 3.50A {Bacteroides fragilis} Length = 729 Back     alignment and structure
>2d3a_A Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea mays} PDB: 2d3b_A* 2d3c_A* Length = 356 Back     alignment and structure
>2ojw_A Glutamine synthetase; amino-acid biosynthesis, ligase, structural GENO structural genomics consortium, SGC; HET: ADP; 2.05A {Homo sapiens} PDB: 2qc8_A* 2uu7_A Length = 384 Back     alignment and structure
>3fky_A Glutamine synthetase; beta-grAsp, catalytic domain, acetylation, cytoplasm, ligase, UBL conjugation; HET: FLC; 2.95A {Saccharomyces cerevisiae} Length = 370 Back     alignment and structure
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A Length = 291 Back     alignment and structure
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824} Length = 272 Back     alignment and structure
>2qee_A BH0493 protein; amidohydrolase, structural genomics, PSI-2, protein structure initiative; 1.65A {Bacillus halodurans c-125} PDB: 3hka_A* 2q6e_A 3hk5_A* 3hk7_A* 3hk8_A* 3hk9_A* 2q08_A* 2pnk_A* Length = 437 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A* Length = 363 Back     alignment and structure
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus} Length = 312 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query683
3qaj_A 444 Glutamine synthetase; AMP-PCP, ACP, ligase; HET: G 100.0
4hpp_A 443 Probable glutamine synthetase; glutamine synthase 100.0
3ng0_A 473 Glutamine synthetase; GSI, nitrogen metabolism, sy 100.0
2qpx_A376 Predicted metal-dependent hydrolase of the TIM-BA; 100.0
4acf_A 486 Glutamine synthetase 1; ligase, nucleotide-binding 100.0
1f52_A 468 Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 100.0
1j5s_A463 Uronate isomerase; TM0064, structural genomics, JC 100.0
3iac_A473 Glucuronate isomerase; IDP02065, structural genom 100.0
2q01_A497 Uronate isomerase; structural genomics, protein st 100.0
2j9i_A 421 Glutamate-ammonia ligase domain-containing protein 100.0
2ojw_A384 Glutamine synthetase; amino-acid biosynthesis, lig 100.0
3fky_A370 Glutamine synthetase; beta-grAsp, catalytic domain 100.0
2d3a_A356 Glutamine synthetase; ligase; HET: P3S ADP; 2.63A 100.0
2qee_A437 BH0493 protein; amidohydrolase, structural genomic 100.0
3o6x_A 729 Glutamine synthetase; type III, beta barrel,dodeca 100.0
3irs_A291 Uncharacterized protein BB4693; structural genomic 99.69
3ij6_A312 Uncharacterized metal-dependent hydrolase; structu 99.61
4do7_A303 Amidohydrolase 2; enzyme function initiative, EFI, 99.6
4inf_A373 Metal-dependent hydrolase; amidohydrolase, metal b 99.54
3cjp_A272 Predicted amidohydrolase, dihydroorotase family; s 99.53
4d9a_A303 2-pyrone-4,6-dicarbaxylate hydrolase; structural g 99.52
2ffi_A288 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; 99.5
3nur_A357 Amidohydrolase; TIM barrel; 1.75A {Staphylococcus 99.5
4i6k_A294 Amidohydrolase family protein; enzyme function ini 99.48
2dvt_A327 Thermophilic reversible gamma-resorcylate decarbo; 99.45
2f6k_A307 Metal-dependent hydrolase; metal dependent hydroly 99.45
2wm1_A336 2-amino-3-carboxymuconate-6-semialdehyde decarboxy 99.38
2hbv_A334 2-amino-3-carboxymuconate 6-semialdehyde decarbox; 99.36
2gwg_A350 4-oxalomesaconate hydratase; TIM-barrel like prote 99.31
4dzi_A423 Putative TIM-barrel metal-dependent hydrolase; ami 99.29
2gzx_A265 Putative TATD related DNAse; deoxyribonuclease, NE 99.28
1j6o_A268 TATD-related deoxyribonuclease; structural genomic 99.26
1yix_A265 Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW 99.12
1zzm_A259 Putative deoxyribonuclease YJJV; hydrolaze, zinc, 98.9
1xwy_A264 DNAse TATD, deoxyribonuclease TATD; TIM barrael, z 98.85
2y1h_A272 Putative deoxyribonuclease tatdn3; hydrolase; 2.50 98.77
1bf6_A291 Phosphotriesterase homology protein; hypothetical 98.49
2xio_A301 Putative deoxyribonuclease tatdn1; hydrolase; 1.19 98.46
3rcm_A287 TATD family hydrolase; HET: CIT; 2.05A {Pseudomona 98.39
2vc7_A314 Aryldialkylphosphatase; phosphotriesterase, promis 98.29
3ovg_A363 Amidohydrolase; structural genomics, PSI-2, protei 98.26
3gg7_A254 Uncharacterized metalloprotein; structural genomic 98.17
3pnz_A330 Phosphotriesterase family protein; amidohydrolase 98.12
3k2g_A364 Resiniferatoxin-binding, phosphotriesterase- relat 98.11
3gtx_A339 Organophosphorus hydrolase; mutant, amidohydrolase 98.04
2ob3_A330 Parathion hydrolase; metalloenzyme, TIM barrel, ne 98.0
3guw_A261 Uncharacterized protein AF_1765; alpha-beta protei 97.95
3rhg_A365 Putative phophotriesterase; hydrolase, amidohydrol 97.95
3tn4_A360 Phosphotriesterase; lactonase, hydrolase; HET: KCX 97.83
3ipw_A325 Hydrolase TATD family protein; niaid, ssgcid, seat 97.51
2z26_A347 Dihydroorotase, dhoase; TIM barrel, hydrolase; HET 96.57
3e2v_A401 3'-5'-exonuclease; structural genomics, hydrolase, 96.57
2i5g_A325 Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, stru 95.82
2gwd_A 449 Glutamate cysteine ligase; disulfide bridges, glut 93.38
3ly0_A364 Dipeptidase AC. metallo peptidase. merops family M 93.27
3id7_A400 Dipeptidase; streptomyces coelicolor A3(2), hydrol 91.82
2vun_A386 Enamidase; nicotinate degradation, binuclear metal 91.73
3b40_A417 PVDM, probable dipeptidase; structural genomics, h 90.87
3neh_A318 Renal dipeptidase family protein; structural genom 90.85
2rag_A417 Dipeptidase; aminohydrolase, structural genomics, 90.7
3pnu_A359 Dihydroorotase; TIM barrel, zinc binding, hydrolas 90.48
1itu_A369 Renal dipeptidase; glycoprotein, membrane-bound, z 90.35
1r8g_A 372 Hypothetical protein YBDK; structural genomics, un 90.05
2z00_A426 Dihydroorotase; zinc binding protein, hydrolase, m 87.71
3gnh_A403 L-lysine, L-arginine carboxypeptidase CC2672; N-me 86.81
3hm7_A448 Allantoinase; metallo-dependent hydrolase, protein 86.43
2ics_A379 Adenine deaminase; TIM barrel, binuclear zinc, ade 81.94
>4hpp_A Probable glutamine synthetase; glutamine synthase homolog, glutamate, polyamine, ligase; HET: GLU; 2.50A {Pseudomonas aeruginosa} Back     alignment and structure
>3ng0_A Glutamine synthetase; GSI, nitrogen metabolism, synec ligase; HET: ANP; 2.80A {Synechocystis SP} Back     alignment and structure
>2qpx_A Predicted metal-dependent hydrolase of the TIM-BA; YP_805737.1, putative metal-dependent hydrolase; HET: KCX MSE; 1.40A {Lactobacillus casei} Back     alignment and structure
>4acf_A Glutamine synthetase 1; ligase, nucleotide-binding, TRI-substituted IMID TAUT state, RV2220, GLNA1; HET: 46B P3S; 2.00A {Mycobacterium tuberculosis} PDB: 2wgs_A* 2whi_A* 3zxr_A* 3zxv_A* 2bvc_A* 1hto_A* 1htq_A* Back     alignment and structure
>1f52_A Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 2.49A {Salmonella typhimurium} SCOP: d.15.9.1 d.128.1.1 PDB: 1f1h_A* 1fpy_A* 1lgr_A* 2lgs_A* 2gls_A Back     alignment and structure
>1j5s_A Uronate isomerase; TM0064, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 2.85A {Thermotoga maritima} SCOP: c.1.9.8 Back     alignment and structure
>3iac_A Glucuronate isomerase; IDP02065, structural genom center for structural genomics of infectious diseases, CSGI; 2.22A {Salmonella typhimurium} SCOP: c.1.9.0 Back     alignment and structure
>2q01_A Uronate isomerase; structural genomics, protein structure initiative NEW YORK SGX research center for structural genomics, nysgx; 2.34A {Caulobacter crescentus} Back     alignment and structure
>2j9i_A Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus} Back     alignment and structure
>2ojw_A Glutamine synthetase; amino-acid biosynthesis, ligase, structural GENO structural genomics consortium, SGC; HET: ADP; 2.05A {Homo sapiens} PDB: 2qc8_A* 2uu7_A Back     alignment and structure
>3fky_A Glutamine synthetase; beta-grAsp, catalytic domain, acetylation, cytoplasm, ligase, UBL conjugation; HET: FLC; 2.95A {Saccharomyces cerevisiae} Back     alignment and structure
>2d3a_A Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea mays} PDB: 2d3b_A* 2d3c_A* Back     alignment and structure
>2qee_A BH0493 protein; amidohydrolase, structural genomics, PSI-2, protein structure initiative; 1.65A {Bacillus halodurans c-125} PDB: 3hka_A* 2q6e_A 3hk5_A* 3hk7_A* 3hk8_A* 3hk9_A* 2q08_A* 2pnk_A* Back     alignment and structure
>3o6x_A Glutamine synthetase; type III, beta barrel,dodecamer, ligas; HET: P3S ADP; 3.50A {Bacteroides fragilis} Back     alignment and structure
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A Back     alignment and structure
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus} Back     alignment and structure
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A Back     alignment and structure
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A* Back     alignment and structure
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824} Back     alignment and structure
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15 Back     alignment and structure
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus} Back     alignment and structure
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii} Back     alignment and structure
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A* Back     alignment and structure
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15 Back     alignment and structure
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens} Back     alignment and structure
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A Back     alignment and structure
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15 Back     alignment and structure
>4dzi_A Putative TIM-barrel metal-dependent hydrolase; amidohydrolase, bimetal binding site, enzyme FUNC initiative, EFI; HET: SO4; 1.60A {Mycobacterium avium subsp} Back     alignment and structure
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp} Back     alignment and structure
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12 Back     alignment and structure
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12 Back     alignment and structure
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12 Back     alignment and structure
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12 Back     alignment and structure
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens} Back     alignment and structure
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3 Back     alignment and structure
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens} Back     alignment and structure
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida} Back     alignment and structure
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A* Back     alignment and structure
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A* Back     alignment and structure
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0 Back     alignment and structure
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0 Back     alignment and structure
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2} Back     alignment and structure
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A* Back     alignment and structure
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ... Back     alignment and structure
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304} Back     alignment and structure
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis} Back     alignment and structure
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A* Back     alignment and structure
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1} Back     alignment and structure
>2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A* Back     alignment and structure
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae} Back     alignment and structure
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa} Back     alignment and structure
>2gwd_A Glutamate cysteine ligase; disulfide bridges, glutathione biosynthesis, beta-hairpin, R regulation; HET: GLU; 2.09A {Brassica juncea} PDB: 2gwc_A* Back     alignment and structure
>3ly0_A Dipeptidase AC. metallo peptidase. merops family M19; structural genomics, nysgrc, target 9523C, phosphinate inhibitor, PSI-2; HET: LY0; 1.40A {Rhodobacter sphaeroides} PDB: 3fdg_A Back     alignment and structure
>3id7_A Dipeptidase; streptomyces coelicolor A3(2), hydrolase; 1.30A {Streptomyces coelicolor} PDB: 3isi_X* 3itc_A* 3k5x_A* 3s2j_A* 3s2l_A* 3s2m_A* 3s2n_A* Back     alignment and structure
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri} Back     alignment and structure
>3b40_A PVDM, probable dipeptidase; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.00A {Pseudomonas aeruginosa} Back     alignment and structure
>3neh_A Renal dipeptidase family protein; structural genomics, nysgrc, dipeptide L-Leu-D-Ala, PSI-2, P structure initiative; HET: L3A; 1.64A {Listeria monocytogenes} PDB: 3lu2_A Back     alignment and structure
>2rag_A Dipeptidase; aminohydrolase, structural genomics, NYSGXRC, target 9257A, protein structure initiative; 2.00A {Caulobacter crescentus} Back     alignment and structure
>3pnu_A Dihydroorotase; TIM barrel, zinc binding, hydrolase, structu genomics, center for structural genomics of infectious DISE csgid; HET: KCX; 2.40A {Campylobacter jejuni subsp} Back     alignment and structure
>1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease BET lactamase, cilastatin, complex (hydrolase-inhibitor), hydro; HET: NAG CIL; 2.00A {Homo sapiens} SCOP: c.1.9.7 PDB: 1itq_A* Back     alignment and structure
>1r8g_A Hypothetical protein YBDK; structural genomics, unknown function, carboxylate-amine ligase, structure 2 function project, S2F; 2.15A {Escherichia coli} SCOP: d.128.1.3 PDB: 1tt4_A Back     alignment and structure
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus} Back     alignment and structure
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans} Back     alignment and structure
>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 683
d2qeec1415 c.1.9.8 (C:2-416) Uncharacterized protein BH0493 { 4e-43
d1j5sa_451 c.1.9.8 (A:) Uronate isomerase TM0064 {Thermotoga 1e-33
d1f52a2 368 d.128.1.1 (A:101-468) Glutamine synthetase, C-term 3e-22
d2bvca2 374 d.128.1.1 (A:105-478) Glutamine synthetase, C-term 7e-16
d1bf6a_291 c.1.9.3 (A:) Phosphotriesterase homology protein { 1e-05
d1f52a1100 d.15.9.1 (A:1-100) Glutamine synthetase, N-termina 5e-05
d2bvca1100 d.15.9.1 (A:5-104) Glutamine synthetase, N-termina 7e-04
>d2qeec1 c.1.9.8 (C:2-416) Uncharacterized protein BH0493 {Bacillus halodurans [TaxId: 86665]} Length = 415 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Uronate isomerase-like
domain: Uncharacterized protein BH0493
species: Bacillus halodurans [TaxId: 86665]

 Score =  158 bits (401), Expect = 4e-43
 Identities = 61/436 (13%), Positives = 120/436 (27%), Gaps = 89/436 (20%)

Query: 4   EELREVVENIELVDGHAHNIVSLDSSFPF--------------------IQSFSEATGPA 43
           E+++  V N  + D H H                                 S       +
Sbjct: 10  EKVKNAVNNQPVTDMHTHLFSPNFGEILLWDIDELLTYHYLVAEVMRWTDVSIEAFWAMS 69

Query: 44  LSY-------------APYSLSFKRNLKNIAELYG--CDSSLQAVEEYRRAAGLQSICSI 88
                           +P S + +  L  +  L        LQ   EY      +     
Sbjct: 70  KREQADLIWEELFIKRSPVSEACRGVLTCLQGLGLDPATRDLQVYREYFAKKTSEEQVDT 129

Query: 89  CFEAANISAVLIDDGLKLDKKHGLDWHKSLV-----PFVGRILRIERLAEEILDQASPDG 143
             + AN+S V++ +    D     +    L            LR++ L  E         
Sbjct: 130 VLQLANVSDVVMTNDPFDD----NERISWLEGKQPDSRFHAALRLDPLLNEYEQTK---- 181

Query: 144 SIWTLDVFIETFLKQLRSAANKIVGLKSIAAYRSGLE-----INPHVTKKDAEEGLAEDL 198
                       L+      N      SI   +  L      ++P           +   
Sbjct: 182 ----------HRLRDWGYKVNDEWNEGSIQEVKRFLTDWIERMDPVYMAVSLPPTFSFPE 231

Query: 199 RSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTG--------FGDKDLDLRLSNPLH 250
            S         +    I    L VA+  ++P  +  G         GD    +  ++   
Sbjct: 232 ES---------NRGRIIRDCLLPVAEKHNIPFAMMIGVKKRVHPALGDAGDFVGKASMDG 282

Query: 251 LRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKE 310
           +  +L    +   +F++   S     E   LA  +  + +  G      + + +    + 
Sbjct: 283 VEHLLR--EYPNNKFLVTMLSRENQHELVVLARKFSNLMIF-GCWWFMNNPEIINEMTRM 339

Query: 311 LLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCID-----EDLSVGEAIEV 365
            +E+  T  +   +DA    +        ++ ++  VL D   D      +++  E    
Sbjct: 340 RMEMLGTSFIPQHSDARVLEQLI-YKWHHSKSIIAEVLIDKYDDILQAGWEVTEEEIKRD 398

Query: 366 AKDIFALNAAQFYKIN 381
             D+F+ N  +F   N
Sbjct: 399 VADLFSRNFWRFVGRN 414
>d1j5sa_ c.1.9.8 (A:) Uronate isomerase TM0064 {Thermotoga maritima [TaxId: 2336]} Length = 451 Back     information, alignment and structure
>d1f52a2 d.128.1.1 (A:101-468) Glutamine synthetase, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} Length = 368 Back     information, alignment and structure
>d2bvca2 d.128.1.1 (A:105-478) Glutamine synthetase, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 374 Back     information, alignment and structure
>d1bf6a_ c.1.9.3 (A:) Phosphotriesterase homology protein {Escherichia coli [TaxId: 562]} Length = 291 Back     information, alignment and structure
>d1f52a1 d.15.9.1 (A:1-100) Glutamine synthetase, N-terminal domain {Salmonella typhimurium [TaxId: 90371]} Length = 100 Back     information, alignment and structure
>d2bvca1 d.15.9.1 (A:5-104) Glutamine synthetase, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 100 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query683
d1j5sa_451 Uronate isomerase TM0064 {Thermotoga maritima [Tax 100.0
d2qeec1415 Uncharacterized protein BH0493 {Bacillus haloduran 100.0
d1f52a2 368 Glutamine synthetase, C-terminal domain {Salmonell 100.0
d2bvca2 374 Glutamine synthetase, C-terminal domain {Mycobacte 100.0
d1f52a1100 Glutamine synthetase, N-terminal domain {Salmonell 99.69
d2bvca1100 Glutamine synthetase, N-terminal domain {Mycobacte 99.67
d2dvta1325 Thermophilic reversible gamma-resorcylate decarbox 99.59
d2f6ka1306 Putative amidohydrolase LP2961 {Lactobacillus plan 99.58
d2gwga1342 4-oxalomesaconate hydratase LigJ {Rhodopseudomonas 99.35
d2hbva1331 2-amino-3-carboxymuconate 6-semialdehyde decarboxy 99.32
d2ffia1271 Putative 2-pyrone-4,6-dicarboxylic acid hydrolase 99.03
d1bf6a_291 Phosphotriesterase homology protein {Escherichia c 98.67
d1i0da_331 Phosphotriesterase (parathion hydrolase, PTE) {Pse 98.3
d1yixa1265 Putative deoxyribonuclease YcfH {Escherichia coli 97.94
d1zzma1259 Putative deoxyribonuclease YjjV {Escherichia coli 97.78
d1j6oa_260 Hypothetical protein TM0667 {Thermotoga maritima [ 97.56
d1xwya1260 Deoxyribonuclease TatD (MttC) {Escherichia coli [T 97.37
d1r8ga_ 368 Carboxylate-amine ligase YbdK {Escherichia coli [T 94.07
d1itua_369 Renal dipeptidase {Human (Homo sapiens) [TaxId: 96 91.75
d1xrta2310 Two-domain dihydroorotase {Aquifex aeolicus [TaxId 90.59
d2ftwa2334 Dihydropyrimidine amidohydrolase Pyd2 {Dictyosteli 80.35
>d1j5sa_ c.1.9.8 (A:) Uronate isomerase TM0064 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Uronate isomerase-like
domain: Uronate isomerase TM0064
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=5.2e-57  Score=496.37  Aligned_cols=363  Identities=15%  Similarity=0.109  Sum_probs=300.6

Q ss_pred             HHHHHHhccCCcccccCCCcccCC-CCc-------------------------chhhccccccCCC----C-CCCCc---
Q 005679            4 EELREVVENIELVDGHAHNIVSLD-SSF-------------------------PFIQSFSEATGPA----L-SYAPY---   49 (683)
Q Consensus         4 ~~l~~~i~~~p~iD~H~H~~~~~~-~~~-------------------------~~~~~~~ea~~~~----~-~~~~~---   49 (683)
                      .+|++.|+++||||+|||.....- .+.                         |.+.++++++...    . +.++.   
T Consensus        16 ~~Ly~~i~~~PIiD~H~Hl~p~~~~e~~~F~~i~~l~~~~DHY~~r~mr~~Gi~e~~itg~a~~~ekf~~~a~~~~~~~g   95 (451)
T d1j5sa_          16 VRLFNEVKDLPIVDPHNHLDAKDIVENKPWNDIWEVEGATDHYVWELMRRCGVSEEYITGSRSNKEKWLALAKVFPRFVG   95 (451)
T ss_dssp             HHHHHHHTTSCEEESCCCCCHHHHHHTCCCSCHHHHHTTTCHHHHHHHHHTTCCGGGTTSSSCHHHHHHHHHHHGGGGTT
T ss_pred             HHHHHHHhCCCEeCCCCCCCHHHHhhcCCCCCHHHHhccccHHHHHHHHHCCCCHHHccCCCCHHHHHHHHHHHhHHhcC
Confidence            478999999999999999654421 012                         3444444332210    0 12222   


Q ss_pred             chhHHHHHHHHHHHhCCCC-----CHHHHHHHHHHcChhhHHHHHHhhCCcEEEEEecCCCCCCCCChHHHhhhcC----
Q 005679           50 SLSFKRNLKNIAELYGCDS-----SLQAVEEYRRAAGLQSICSICFEAANISAVLIDDGLKLDKKHGLDWHKSLVP----  120 (683)
Q Consensus        50 ~l~~~~~~~~l~~~fg~~~-----~~~~i~~~~~~l~~~~~~r~ll~~~~v~~~~~d~g~~~d~~~~~~~h~~~~~----  120 (683)
                      +-.+.|++++|+++|||+.     ||++||+++|+..+++++|.||+++||+++||    |+||+++++||+.+..    
T Consensus        96 nP~~~w~~~el~~~fgi~~~l~~~~a~~i~~~~n~~l~~~~~r~ll~~~~Ve~v~t----Tddp~D~L~~h~~~~~~~~~  171 (451)
T d1j5sa_          96 NPTYEWIHLDLWRRFNIKKVISEETAEEIWEETKKKLPEMTPQKLLRDMKVEILCT----TDDPVSTLEHHRKAKEAVEG  171 (451)
T ss_dssp             SHHHHHHHHHHHHHSCCCCCCSHHHHHHHHHHHHHHSTTCCHHHHHHHTTEEEEEC----CBCTTCCCHHHHHHHHHCCS
T ss_pred             ChhHHHHHHHHHHHcCCCCCCChhhHHHHHHHHHHHhccccHHHHHHHhchheeec----cCCCCCchHHHHHhhcCCCC
Confidence            2235779999999999986     89999999999656789999999999999999    7888999999998754    


Q ss_pred             -------CCCeEEecchHHH-HHHHhhCC--CCCcccHHHHHHHHHHHHHhhcccceeeeeeeccccCCCCCCC--CCHH
Q 005679          121 -------FVGRILRIERLAE-EILDQASP--DGSIWTLDVFIETFLKQLRSAANKIVGLKSIAAYRSGLEINPH--VTKK  188 (683)
Q Consensus       121 -------~~~~i~rie~~~~-~~~~~~~~--~~~~~~~~~~~~al~~~l~~~~~~~vgfksi~~y~~gl~~~~~--~~~~  188 (683)
                             |||+++.|+...+ +++.++..  +..+.++++|++++++|++++     +.|++.||+||++..+.  .+.+
T Consensus       172 ~rv~p~fRpD~~l~i~~~~f~~~~~~L~~~~g~~i~s~~~~~~aL~~r~~~f-----~~~G~~asdhGl~~~~~~~~~~~  246 (451)
T d1j5sa_         172 VTILPTWRPDRAMNVDKEGWREYVEKMGERYGEDTSTLDGFLNALWKSHEHF-----KEHGCVASDHALLEPSVYYVDEN  246 (451)
T ss_dssp             CEEECCBCCHHHHCTTSTTHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHH-----HTTTCCEEEEEESSCCCCCCCHH
T ss_pred             ceEecccchHhhhcccchhHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHH-----hcCceEEeccCccccccccCCHH
Confidence                   6777777776554 77777753  456889999999999999875     45666789999998876  6899


Q ss_pred             HHHHHHHHHHhcCCCCccCchhhhhHHHHHHHHHHhhCCCcEEEecCCC-------------CCCCCCCCCCccc---hH
Q 005679          189 DAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGFG-------------DKDLDLRLSNPLH---LR  252 (683)
Q Consensus       189 ea~~~~~~~l~~~~~~~~~~~~l~d~~~~~l~e~a~e~glpvq~H~G~G-------------d~~~~~~~~~p~~---L~  252 (683)
                      +++++|++.++++.....+.+.+..+++..+.++|.++|||||+|+|++             |.|.|.....+..   |.
T Consensus       247 ~~~~if~k~~~g~~~s~~e~~~~~~~ll~~l~~~~~~~g~~mQlH~G~~Rn~n~~~~~~~G~d~G~D~~~~~~~~~~~l~  326 (451)
T d1j5sa_         247 RARAVHEKAFSGEKLTQDEINDYKAFMMVQFGKMNQETNWVTQLHIGALRDYRDSLFKTLGPDSGGDISTNFLRIAEGLR  326 (451)
T ss_dssp             HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECEECSCSHHHHHHTCSSSSCCEECSCCCHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCcceeeecccccccchHHHHhcCCCCccccccchHHHHHHHH
Confidence            9999999999876666777788999999999999999999999999995             5666654444432   33


Q ss_pred             HHHhhcCCCCceEEEecCCCCcHHHHHHHHhhCCeeEeccccccCCccHHHHHHHHHHHHhhCCCCcEE-EecCCCCCcc
Q 005679          253 AILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVM-FSTDAYASPE  331 (683)
Q Consensus       253 ~l~~~~~~P~l~~vl~H~g~p~~~e~~~la~~~pnVy~d~s~~~~~~~~~g~~~~l~~~le~~~~~kil-fgSD~~~~Pe  331 (683)
                      .++.. .+|+.|+|+.|.++|+.+++++||++|||||+|.+|||++ +++||++++++++|++|++|++ |+||+|+||+
T Consensus       327 ~~L~~-~~~~~k~vL~~l~~~~~~e~a~la~~f~nv~~g~~wwf~d-~~~gm~~~l~~~~e~~~~sk~vg~~TDsr~f~s  404 (451)
T d1j5sa_         327 YFLNE-FDGKLKIVLYVLDPTHLPTISTIARAFPNVYVGAPWWFND-SPFGMEMHLKYLASVDLLYNLAGMVTDSRKLLS  404 (451)
T ss_dssp             HHHHH-STTTSCEEEEESSGGGHHHHHHHHHHCTTEEECCCCSTTC-SHHHHHHHHHHHHTTSCGGGCCCCCCCCSSTTH
T ss_pred             HHHHh-cCCCCCEEEEeCCcccHHHHHHHHhcCCcceECCeeeEeC-cHHHHHHHHHHHHHhcCccceeeeecCcchhch
Confidence            33332 6799999999999999999999999999999999999975 6999999999999999999998 9999999998


Q ss_pred             chhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHh
Q 005679          332 TYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFY  378 (683)
Q Consensus       332 ~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~I~~~NA~rly  378 (683)
                       +|+++++|||+||++|+++|++|++|.++|++++++|||+||+++|
T Consensus       405 -~~~rh~~fRril~~~L~~~V~~G~~~~~~a~~i~~dI~y~Na~~~y  450 (451)
T d1j5sa_         405 -FGSRTEMFRRVLSNVVGEMVEKGQIPIKEARELVKHVSYDGPKALF  450 (451)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHH
T ss_pred             -hHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHhc
Confidence             5789999999999999999999999999999999999999999998
>d2qeec1 c.1.9.8 (C:2-416) Uncharacterized protein BH0493 {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure
>d1f52a2 d.128.1.1 (A:101-468) Glutamine synthetase, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2bvca2 d.128.1.1 (A:105-478) Glutamine synthetase, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1f52a1 d.15.9.1 (A:1-100) Glutamine synthetase, N-terminal domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2bvca1 d.15.9.1 (A:5-104) Glutamine synthetase, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2dvta1 c.1.9.15 (A:1-325) Thermophilic reversible gamma-resorcylate decarboxylase {Rhizobium sp. MTP-10005 [TaxId: 267998]} Back     information, alignment and structure
>d2f6ka1 c.1.9.15 (A:2-307) Putative amidohydrolase LP2961 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d2gwga1 c.1.9.15 (A:1-342) 4-oxalomesaconate hydratase LigJ {Rhodopseudomonas palustris [TaxId: 1076]} Back     information, alignment and structure
>d2hbva1 c.1.9.15 (A:3-333) 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD {Pseudomonas fluorescens [TaxId: 294]} Back     information, alignment and structure
>d2ffia1 c.1.9.15 (A:10-280) Putative 2-pyrone-4,6-dicarboxylic acid hydrolase PP1699 {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1bf6a_ c.1.9.3 (A:) Phosphotriesterase homology protein {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1i0da_ c.1.9.3 (A:) Phosphotriesterase (parathion hydrolase, PTE) {Pseudomonas diminuta [TaxId: 293]} Back     information, alignment and structure
>d1yixa1 c.1.9.12 (A:1-265) Putative deoxyribonuclease YcfH {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1zzma1 c.1.9.12 (A:1-259) Putative deoxyribonuclease YjjV {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1j6oa_ c.1.9.12 (A:) Hypothetical protein TM0667 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1xwya1 c.1.9.12 (A:1-260) Deoxyribonuclease TatD (MttC) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1r8ga_ d.128.1.3 (A:) Carboxylate-amine ligase YbdK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1itua_ c.1.9.7 (A:) Renal dipeptidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xrta2 c.1.9.6 (A:56-365) Two-domain dihydroorotase {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d2ftwa2 c.1.9.6 (A:60-393) Dihydropyrimidine amidohydrolase Pyd2 {Dictyostelium discoideum [TaxId: 44689]} Back     information, alignment and structure