Citrus Sinensis ID: 005690
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 683 | 2.2.26 [Sep-21-2011] | |||||||
| P48981 | 731 | Beta-galactosidase OS=Mal | N/A | no | 0.979 | 0.915 | 0.794 | 0.0 | |
| P48980 | 835 | Beta-galactosidase OS=Sol | N/A | no | 0.976 | 0.798 | 0.744 | 0.0 | |
| Q9SCV0 | 728 | Beta-galactosidase 12 OS= | yes | no | 0.976 | 0.916 | 0.724 | 0.0 | |
| P45582 | 832 | Beta-galactosidase OS=Asp | N/A | no | 0.970 | 0.796 | 0.737 | 0.0 | |
| Q9SCW1 | 847 | Beta-galactosidase 1 OS=A | no | no | 0.976 | 0.787 | 0.725 | 0.0 | |
| Q9LFA6 | 727 | Beta-galactosidase 2 OS=A | no | no | 0.978 | 0.918 | 0.699 | 0.0 | |
| Q9SCV8 | 724 | Beta-galactosidase 4 OS=A | no | no | 0.976 | 0.921 | 0.704 | 0.0 | |
| Q8W0A1 | 827 | Beta-galactosidase 2 OS=O | yes | no | 0.972 | 0.802 | 0.697 | 0.0 | |
| Q6Z6K4 | 729 | Beta-galactosidase 4 OS=O | no | no | 0.969 | 0.908 | 0.694 | 0.0 | |
| A2X2H7 | 729 | Beta-galactosidase 4 OS=O | N/A | no | 0.969 | 0.908 | 0.692 | 0.0 |
| >sp|P48981|BGAL_MALDO Beta-galactosidase OS=Malus domestica PE=1 SV=1 | Back alignment and function desciption |
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Score = 1125 bits (2909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/671 (79%), Positives = 599/671 (89%), Gaps = 2/671 (0%)
Query: 14 QMWPDLIQKAKDGGLDVIQTYVFWNGHEPTQGNYYFQDRYDLVRFIKLVQQAGLYVHLRI 73
+MWPDLIQKAKDGGLDVIQTYVFWNGHEP+ GNYYF++RYDLV+FIKLVQQ GL+V+LRI
Sbjct: 55 EMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGNYYFEERYDLVKFIKLVQQEGLFVNLRI 114
Query: 74 GPYVCAEWNYGGFPVWLKYVPGIEFRTDNGPFKAAMHKFTEKIVSMMKAEKLFQTQGGPI 133
GPYVCAEWN+GGFPVWLKYVPGI FRTDN PFKAAM KFTEKIVSMMKAEKLFQTQGGPI
Sbjct: 115 GPYVCAEWNFGGFPVWLKYVPGIAFRTDNEPFKAAMQKFTEKIVSMMKAEKLFQTQGGPI 174
Query: 134 ILSQIENEFGPVEWDIGAPGKAYAKWAAQMAVGLNTGVPWVMCKQDDAPDPVINTCNGFY 193
ILSQIENEFGPVEW+IGAPGKAY KWAAQMAVGL+TGVPW+MCKQ+DAPDPVI+TCNGFY
Sbjct: 175 ILSQIENEFGPVEWEIGAPGKAYTKWAAQMAVGLDTGVPWIMCKQEDAPDPVIDTCNGFY 234
Query: 194 CEKFVPNQNYKPKMWTEAWTGWFTEFGSAVPTRPAEDLVFSVARFIQSGGSFINYYMYHG 253
CE F PN++YKPKMWTE WTGW+TEFG AVPTRPAED+ FSVARFIQSGGSF+NYYMYHG
Sbjct: 235 CENFKPNKDYKPKMWTEVWTGWYTEFGGAVPTRPAEDVAFSVARFIQSGGSFLNYYMYHG 294
Query: 254 GTNFGRTSGG-FVATSYDYDAPIDEYGLLNEPKWGHLRDLHKAIKLCEPALVSVDPTVKS 312
GTNFGRT+GG F+ATSYDYDAP+DEYGL EPKWGHLRDLHKAIK CE ALVSVDP+V
Sbjct: 295 GTNFGRTAGGPFMATSYDYDAPLDEYGLPREPKWGHLRDLHKAIKSCESALVSVDPSVTK 354
Query: 313 LGKNQEAHVFNSKSGKCAAFLANYDTTFSAKVSFGNAQYDLPPWSISVLPDCKTAVFNTA 372
LG NQEAHVF S+S CAAFLANYD +S KVSFG QYDLPPWSIS+LPDCKT V+NTA
Sbjct: 355 LGSNQEAHVFKSES-DCAAFLANYDAKYSVKVSFGGGQYDLPPWSISILPDCKTEVYNTA 413
Query: 373 RVGVQSSQKKFVPVINAFSWQSYIEETASSTDDNTFTKDGLWEQVYLTADASDYLWYMTD 432
+VG QSSQ + PV + F WQS+IEET SS + +T T DGL+EQ+ +T D +DYLWYMTD
Sbjct: 414 KVGSQSSQVQMTPVHSGFPWQSFIEETTSSDETDTTTLDGLYEQINITRDTTDYLWYMTD 473
Query: 433 VNIDSNEGFLKNGQDPLLTIWSAGHALQVFINGQLSGTVYGSLENPKLTFSKNVKLRPGV 492
+ I S+E FLKNG+ PLLTI+SAGHAL VFINGQLSGTVYGSLENPKL+FS+NV LR G+
Sbjct: 474 ITIGSDEAFLKNGKSPLLTIFSAGHALNVFINGQLSGTVYGSLENPKLSFSQNVNLRSGI 533
Query: 493 NKISLLSTSVGLPNVGTHFEKWNAGVLGPVTLKGLNEGTRDISKQKWTYKIGLKGEALSL 552
NK++LLS SVGLPNVGTHFE WNAGVLGP+TLKGLN GT D+S KWTYK GLKGEAL L
Sbjct: 534 NKLALLSISVGLPNVGTHFETWNAGVLGPITLKGLNSGTWDMSGWKWTYKTGLKGEALGL 593
Query: 553 HTVSGSSSVEWAQGASLAQKQPMTWYKTTFNVPPGNDPLALDMGAMGKGMVWINGQSIGR 612
HTV+GSSSVEW +G S+A+KQP+TWYK TFN PPG+ PLALDMG+MGKG +WINGQS+GR
Sbjct: 594 HTVTGSSSVEWVEGPSMAEKQPLTWYKATFNAPPGDAPLALDMGSMGKGQIWINGQSVGR 653
Query: 613 HWPGYIGNGNCGGCNYAGTYTEKKCRTYCGKPSQRWYHVPRSWLKPSGNLLVVFEEWGGE 672
HWPGYI G+CG C+YAGTY +KKCRT+CG+PSQRWYH+PRSWL P+GNLLVVFEEWGG+
Sbjct: 654 HWPGYIARGSCGDCSYAGTYDDKKCRTHCGEPSQRWYHIPRSWLTPTGNLLVVFEEWGGD 713
Query: 673 PHWISLLKRTT 683
P ISL++R T
Sbjct: 714 PSRISLVERGT 724
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Involved in cell wall degradation. Degrades polysaccharides containing beta-(1-->4)-linked galactans, acting as an exo-(1-->4)-beta-D-galactanase. Malus domestica (taxid: 3750) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 3 |
| >sp|P48980|BGAL_SOLLC Beta-galactosidase OS=Solanum lycopersicum PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9SCV0|BGA12_ARATH Beta-galactosidase 12 OS=Arabidopsis thaliana GN=BGAL12 PE=2 SV=1 | Back alignment and function description |
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| >sp|P45582|BGAL_ASPOF Beta-galactosidase OS=Asparagus officinalis PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9SCW1|BGAL1_ARATH Beta-galactosidase 1 OS=Arabidopsis thaliana GN=BGAL1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9LFA6|BGAL2_ARATH Beta-galactosidase 2 OS=Arabidopsis thaliana GN=BGAL2 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q9SCV8|BGAL4_ARATH Beta-galactosidase 4 OS=Arabidopsis thaliana GN=BGAL4 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q8W0A1|BGAL2_ORYSJ Beta-galactosidase 2 OS=Oryza sativa subsp. japonica GN=Os01g0580200 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q6Z6K4|BGAL4_ORYSJ Beta-galactosidase 4 OS=Oryza sativa subsp. japonica GN=Os02g0219200 PE=2 SV=1 | Back alignment and function description |
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| >sp|A2X2H7|BGAL4_ORYSI Beta-galactosidase 4 OS=Oryza sativa subsp. indica GN=OsI_006270 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 683 | ||||||
| 20384648 | 737 | beta-galactosidase [Citrus sinensis] | 0.980 | 0.909 | 0.989 | 0.0 | |
| 255546097 | 840 | beta-galactosidase, putative [Ricinus co | 0.979 | 0.796 | 0.816 | 0.0 | |
| 224087947 | 838 | predicted protein [Populus trichocarpa] | 0.979 | 0.798 | 0.798 | 0.0 | |
| 165906266 | 836 | beta-galactosidase [Prunus salicina] | 0.979 | 0.800 | 0.798 | 0.0 | |
| 157313306 | 836 | beta-galactosidase protein 1 [Prunus per | 0.979 | 0.800 | 0.801 | 0.0 | |
| 448278449 | 725 | beta-galactosidase 101 [Malus x domestic | 0.978 | 0.921 | 0.786 | 0.0 | |
| 12583687 | 731 | beta-D-galactosidase [Pyrus pyrifolia] | 0.979 | 0.915 | 0.795 | 0.0 | |
| 61162199 | 725 | beta-D-galactosidase [Pyrus pyrifolia] | 0.976 | 0.92 | 0.790 | 0.0 | |
| 1352078 | 731 | RecName: Full=Beta-galactosidase; AltNam | 0.979 | 0.915 | 0.794 | 0.0 | |
| 356564794 | 839 | PREDICTED: beta-galactosidase-like [Glyc | 0.979 | 0.797 | 0.788 | 0.0 |
| >gi|20384648|gb|AAK31801.1| beta-galactosidase [Citrus sinensis] | Back alignment and taxonomy information |
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Score = 1376 bits (3562), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 663/670 (98%), Positives = 665/670 (99%)
Query: 14 QMWPDLIQKAKDGGLDVIQTYVFWNGHEPTQGNYYFQDRYDLVRFIKLVQQAGLYVHLRI 73
+MWPDLIQKAKDGGLDVIQTYVFWNGHEPTQGNYYFQDRYDLVRFIKLVQQAGLYVHLRI
Sbjct: 68 EMWPDLIQKAKDGGLDVIQTYVFWNGHEPTQGNYYFQDRYDLVRFIKLVQQAGLYVHLRI 127
Query: 74 GPYVCAEWNYGGFPVWLKYVPGIEFRTDNGPFKAAMHKFTEKIVSMMKAEKLFQTQGGPI 133
GPYVCAEWNYGGFPVWLKYVPGIEFRTDNGPFKAAMHKFTEKIVSMMKAEKLFQTQGGPI
Sbjct: 128 GPYVCAEWNYGGFPVWLKYVPGIEFRTDNGPFKAAMHKFTEKIVSMMKAEKLFQTQGGPI 187
Query: 134 ILSQIENEFGPVEWDIGAPGKAYAKWAAQMAVGLNTGVPWVMCKQDDAPDPVINTCNGFY 193
ILSQIENEFGPVEWDIGAPGKAYAKWAAQMAVGLNTGVPWVMCKQDDAPDPVINTCNGFY
Sbjct: 188 ILSQIENEFGPVEWDIGAPGKAYAKWAAQMAVGLNTGVPWVMCKQDDAPDPVINTCNGFY 247
Query: 194 CEKFVPNQNYKPKMWTEAWTGWFTEFGSAVPTRPAEDLVFSVARFIQSGGSFINYYMYHG 253
CEKFVPNQNYKPKMWTEAWTGWFTEFGSAVPTRPAEDLVFSVARFIQSGGSFINYYMYHG
Sbjct: 248 CEKFVPNQNYKPKMWTEAWTGWFTEFGSAVPTRPAEDLVFSVARFIQSGGSFINYYMYHG 307
Query: 254 GTNFGRTSGGFVATSYDYDAPIDEYGLLNEPKWGHLRDLHKAIKLCEPALVSVDPTVKSL 313
GTNFGRTSGGFVATSYDYDAPIDEYGLLNEPKWGHLR LHKAIKLCEPALVSVDPTVKSL
Sbjct: 308 GTNFGRTSGGFVATSYDYDAPIDEYGLLNEPKWGHLRGLHKAIKLCEPALVSVDPTVKSL 367
Query: 314 GKNQEAHVFNSKSGKCAAFLANYDTTFSAKVSFGNAQYDLPPWSISVLPDCKTAVFNTAR 373
G+NQEAHVFNS SGKCAAFLANYDTTFSAKVSFGNAQYDLPPWSISVLPDCKTAVFNTAR
Sbjct: 368 GENQEAHVFNSISGKCAAFLANYDTTFSAKVSFGNAQYDLPPWSISVLPDCKTAVFNTAR 427
Query: 374 VGVQSSQKKFVPVINAFSWQSYIEETASSTDDNTFTKDGLWEQVYLTADASDYLWYMTDV 433
VGVQSSQKKFVPVINAFSWQSYIEETASSTDDNTFTKDGLWEQVYLTADASDYLWYMTDV
Sbjct: 428 VGVQSSQKKFVPVINAFSWQSYIEETASSTDDNTFTKDGLWEQVYLTADASDYLWYMTDV 487
Query: 434 NIDSNEGFLKNGQDPLLTIWSAGHALQVFINGQLSGTVYGSLENPKLTFSKNVKLRPGVN 493
NI SNEGFLKNGQDPLLTIWSAGHALQVFINGQLSGTVYGSLENPKLTFSKNVKLR GVN
Sbjct: 488 NIGSNEGFLKNGQDPLLTIWSAGHALQVFINGQLSGTVYGSLENPKLTFSKNVKLRAGVN 547
Query: 494 KISLLSTSVGLPNVGTHFEKWNAGVLGPVTLKGLNEGTRDISKQKWTYKIGLKGEALSLH 553
KISLLSTSVGLPNVGTHFEKWNAGVLGPVTLKGLNEGTRDISKQKWTYKIGLKGEALSLH
Sbjct: 548 KISLLSTSVGLPNVGTHFEKWNAGVLGPVTLKGLNEGTRDISKQKWTYKIGLKGEALSLH 607
Query: 554 TVSGSSSVEWAQGASLAQKQPMTWYKTTFNVPPGNDPLALDMGAMGKGMVWINGQSIGRH 613
TVSGSSSVEWAQGASLAQKQPMTWYKTTFNVPPGNDPLALDMGAMGKGMVWINGQSIGRH
Sbjct: 608 TVSGSSSVEWAQGASLAQKQPMTWYKTTFNVPPGNDPLALDMGAMGKGMVWINGQSIGRH 667
Query: 614 WPGYIGNGNCGGCNYAGTYTEKKCRTYCGKPSQRWYHVPRSWLKPSGNLLVVFEEWGGEP 673
WPGYIGNGNCGGCNYAGTYTEKKCRTYCGKPSQRWYHVPRS LKPSGNLLVVFEEWGGEP
Sbjct: 668 WPGYIGNGNCGGCNYAGTYTEKKCRTYCGKPSQRWYHVPRSRLKPSGNLLVVFEEWGGEP 727
Query: 674 HWISLLKRTT 683
HWISLLKRTT
Sbjct: 728 HWISLLKRTT 737
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Source: Citrus sinensis Species: Citrus sinensis Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255546097|ref|XP_002514108.1| beta-galactosidase, putative [Ricinus communis] gi|223546564|gb|EEF48062.1| beta-galactosidase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|224087947|ref|XP_002308268.1| predicted protein [Populus trichocarpa] gi|222854244|gb|EEE91791.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|165906266|gb|ABY71826.1| beta-galactosidase [Prunus salicina] | Back alignment and taxonomy information |
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| >gi|157313306|gb|ABV32546.1| beta-galactosidase protein 1 [Prunus persica] | Back alignment and taxonomy information |
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| >gi|448278449|gb|AGE44111.1| beta-galactosidase 101 [Malus x domestica] | Back alignment and taxonomy information |
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| >gi|12583687|dbj|BAB21492.1| beta-D-galactosidase [Pyrus pyrifolia] | Back alignment and taxonomy information |
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| >gi|61162199|dbj|BAD91081.1| beta-D-galactosidase [Pyrus pyrifolia] | Back alignment and taxonomy information |
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| >gi|1352078|sp|P48981.1|BGAL_MALDO RecName: Full=Beta-galactosidase; AltName: Full=Acid beta-galactosidase; Short=Lactase; AltName: Full=Exo-(1-->4)-beta-D-galactanase; Flags: Precursor gi|507278|gb|AAA62324.1| b-galactosidase-related protein; putative [Malus x domestica] | Back alignment and taxonomy information |
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| >gi|356564794|ref|XP_003550633.1| PREDICTED: beta-galactosidase-like [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 683 | ||||||
| TAIR|locus:2091496 | 847 | BGAL1 "beta galactosidase 1" [ | 0.976 | 0.787 | 0.716 | 7.8e-284 | |
| TAIR|locus:2120830 | 728 | BGAL12 "beta-galactosidase 12" | 0.976 | 0.916 | 0.713 | 1.3e-281 | |
| TAIR|locus:2085131 | 727 | BGAL2 "beta-galactosidase 2" [ | 0.978 | 0.918 | 0.684 | 2.7e-274 | |
| TAIR|locus:2170282 | 724 | BGAL4 "beta-galactosidase 4" [ | 0.976 | 0.921 | 0.690 | 5.5e-267 | |
| TAIR|locus:2115310 | 856 | BGAL3 "beta-galactosidase 3" [ | 0.976 | 0.779 | 0.622 | 2.8e-247 | |
| TAIR|locus:2028265 | 732 | BGAL5 "beta-galactosidase 5" [ | 0.978 | 0.912 | 0.623 | 1.2e-239 | |
| TAIR|locus:2056623 | 852 | BGAL8 "beta-galactosidase 8" [ | 0.970 | 0.778 | 0.567 | 1.7e-215 | |
| TAIR|locus:2163951 | 741 | BGAL10 "beta-galactosidase 10" | 0.970 | 0.894 | 0.530 | 7e-196 | |
| TAIR|locus:2180439 | 826 | BGAL7 "beta-galactosidase 7" [ | 0.964 | 0.797 | 0.480 | 9.1e-171 | |
| TAIR|locus:2031417 | 815 | BGAL16 "beta-galactosidase 16" | 0.859 | 0.720 | 0.501 | 3.8e-168 |
| TAIR|locus:2091496 BGAL1 "beta galactosidase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2727 (965.0 bits), Expect = 7.8e-284, P = 7.8e-284
Identities = 481/671 (71%), Positives = 565/671 (84%)
Query: 14 QMWPDLIQKAKDGGLDVIQTYVFWNGHEPTQGNYYFQDRYDLVRFIKLVQQAGLYVHLRI 73
+MWPDLI+KAK+GGLDVIQTYVFWNGHEP+ G YYF+ YDLV+F+KLVQQ+GLY+HLRI
Sbjct: 63 EMWPDLIRKAKEGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFVKLVQQSGLYLHLRI 122
Query: 74 GPYVCAEWNYGGFPVWLKYVPGIEFRTDNGPFKAAMHKFTEKIVSMMKAEKLFQTQGGPI 133
GPYVCAEWN+GGFPVWLKY+PGI FRTDNGPFKA M +FT KIV+MMKAE+LF++QGGPI
Sbjct: 123 GPYVCAEWNFGGFPVWLKYIPGISFRTDNGPFKAQMQRFTTKIVNMMKAERLFESQGGPI 182
Query: 134 ILSQIENEFGPVEWDIGAPGKAYAKWAAQMAVGLNTGVPWVMCKQDDAPDPVINTCNGFY 193
ILSQIENE+GP+E+++GAPG++Y WAA+MAVGL TGVPWVMCKQDDAPDP+IN CNGFY
Sbjct: 183 ILSQIENEYGPMEYELGAPGRSYTNWAAKMAVGLGTGVPWVMCKQDDAPDPIINACNGFY 242
Query: 194 CEKFVPNQNYKPKMWTEAWTGWFTEFGSAVPTRPAEDLVFSVARFIQSGGSFINYYMYHG 253
C+ F PN+ YKPKMWTEAWTGWFT+FG VP RPAED+ FSVARFIQ GGSFINYYMYHG
Sbjct: 243 CDYFSPNKAYKPKMWTEAWTGWFTKFGGPVPYRPAEDMAFSVARFIQKGGSFINYYMYHG 302
Query: 254 GTNFGRTSGG-FVATSYDYDAPIDEYGLLNEPKWGHLRDLHKAIKLCEPALVSVDPTVKS 312
GTNFGRT+GG F+ATSYDYDAP+DEYGL +PKWGHL+DLH+AIKLCEPALVS +PT
Sbjct: 303 GTNFGRTAGGPFIATSYDYDAPLDEYGLERQPKWGHLKDLHRAIKLCEPALVSGEPTRMP 362
Query: 313 LGKNQEAHVFNSKSGKCAAFLANYDTTFSAKVSFGNAQYDLPPWSISVLPDCKTAVFNTA 372
LG QEAHV+ SKSG C+AFLANY+ AKVSFGN Y+LPPWSIS+LPDCK V+NTA
Sbjct: 363 LGNYQEAHVYKSKSGACSAFLANYNPKSYAKVSFGNNHYNLPPWSISILPDCKNTVYNTA 422
Query: 373 RVGVQSSQKKFV--PVINAFSWQSYIEETASSTDDNTFTKDGLWEQVYLTADASDYLWYM 430
RVG Q+S+ K V PV SWQ+Y E+ ++ D++ FT GL EQ+ T D SDYLWYM
Sbjct: 423 RVGAQTSRMKMVRVPVHGGLSWQAYNEDPSTYIDES-FTMVGLVEQINTTRDTSDYLWYM 481
Query: 431 TDVNIDSNEGFLKNGQDPLLTIWSAGHALQVFINGQLSGTVYGSLENPKLTFSKNVKLRP 490
TDV +D+NEGFL+NG P LT+ SAGHA+ VFINGQLSG+ YGSL++PKLTF K V LR
Sbjct: 482 TDVKVDANEGFLRNGDLPTLTVLSAGHAMHVFINGQLSGSAYGSLDSPKLTFRKGVNLRA 541
Query: 491 GVNKISLLSTSVGLPNVGTHFEKWNAGVLGPVTLKGLNEGTRDISKQKWTYKIGLKGEAL 550
G NKI++LS +VGLPNVG HFE WNAGVLGPV+L GLN G RD+S QKWTYK+GLKGE+L
Sbjct: 542 GFNKIAILSIAVGLPNVGPHFETWNAGVLGPVSLNGLNGGRRDLSWQKWTYKVGLKGESL 601
Query: 551 SLHTVSGSSSVEWAQGASLAQKQPMTWYKTTFNVPPGNDPLALDMGAMGKGMVWINGQSI 610
SLH++SGSSSVEWA+GA +AQKQP+TWYKTTF+ P G+ PLA+DMG+MGKG +WINGQS+
Sbjct: 602 SLHSLSGSSSVEWAEGAFVAQKQPLTWYKTTFSAPAGDSPLAVDMGSMGKGQIWINGQSL 661
Query: 611 GRHWPXXXXXXXXXXXXXXXTYTEKKCRTYCGKPSQRWYHVPRSWLKPSGNLLVVFEEWG 670
GRHWP T+ E KC CG+ SQRWYHVPRSWLKPSGNLLVVFEEWG
Sbjct: 662 GRHWPAYKAVGSCSECSYTGTFREDKCLRNCGEASQRWYHVPRSWLKPSGNLLVVFEEWG 721
Query: 671 GEPHWISLLKR 681
G+P+ I+L++R
Sbjct: 722 GDPNGITLVRR 732
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| TAIR|locus:2120830 BGAL12 "beta-galactosidase 12" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2085131 BGAL2 "beta-galactosidase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2170282 BGAL4 "beta-galactosidase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2115310 BGAL3 "beta-galactosidase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2028265 BGAL5 "beta-galactosidase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2056623 BGAL8 "beta-galactosidase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2163951 BGAL10 "beta-galactosidase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2180439 BGAL7 "beta-galactosidase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2031417 BGAL16 "beta-galactosidase 16" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P45582 | BGAL_ASPOF | 3, ., 2, ., 1, ., 2, 3 | 0.7373 | 0.9707 | 0.7968 | N/A | no |
| Q00662 | BGAL_DIACA | 3, ., 2, ., 1, ., 2, 3 | 0.6835 | 0.9751 | 0.9110 | N/A | no |
| A2X2H7 | BGAL4_ORYSI | 3, ., 2, ., 1, ., 2, 3 | 0.6929 | 0.9692 | 0.9080 | N/A | no |
| Q9SCV8 | BGAL4_ARATH | 3, ., 2, ., 1, ., 2, 3 | 0.7040 | 0.9765 | 0.9212 | no | no |
| Q9SCV0 | BGA12_ARATH | 3, ., 2, ., 1, ., 2, 3 | 0.7242 | 0.9765 | 0.9162 | yes | no |
| Q8W0A1 | BGAL2_ORYSJ | 3, ., 2, ., 1, ., 2, 3 | 0.6970 | 0.9721 | 0.8029 | yes | no |
| Q54MV6 | BGAL2_DICDI | 3, ., 2, ., 1, ., 2, 3 | 0.3588 | 0.9341 | 0.8383 | yes | no |
| P48981 | BGAL_MALDO | 3, ., 2, ., 1, ., 2, 3 | 0.7943 | 0.9795 | 0.9151 | N/A | no |
| P48980 | BGAL_SOLLC | 3, ., 2, ., 1, ., 2, 3 | 0.7443 | 0.9765 | 0.7988 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.2.1.23 | 0.979 |
| 3rd Layer | 3.2.1 | 0.983 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | fgenesh4_pm.C_LG_VI000400 | beta-galactosidase (838 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
 | POPTRKOR1 | • | 0.435 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 683 | |||
| PLN03059 | 840 | PLN03059, PLN03059, beta-galactosidase; Provisiona | 0.0 | |
| pfam01301 | 318 | pfam01301, Glyco_hydro_35, Glycosyl hydrolases fam | 1e-147 | |
| COG1874 | 673 | COG1874, LacA, Beta-galactosidase [Carbohydrate tr | 1e-13 |
| >gnl|CDD|166698 PLN03059, PLN03059, beta-galactosidase; Provisional | Back alignment and domain information |
|---|
Score = 1246 bits (3224), Expect = 0.0
Identities = 548/671 (81%), Positives = 605/671 (90%), Gaps = 2/671 (0%)
Query: 14 QMWPDLIQKAKDGGLDVIQTYVFWNGHEPTQGNYYFQDRYDLVRFIKLVQQAGLYVHLRI 73
+MWPDLIQKAKDGGLDVIQTYVFWNGHEP+ GNYYF+DRYDLV+FIK+VQ AGLYVHLRI
Sbjct: 59 EMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGNYYFEDRYDLVKFIKVVQAAGLYVHLRI 118
Query: 74 GPYVCAEWNYGGFPVWLKYVPGIEFRTDNGPFKAAMHKFTEKIVSMMKAEKLFQTQGGPI 133
GPY+CAEWN+GGFPVWLKYVPGIEFRTDNGPFKAAM KFTEKIV MMK+EKLF+ QGGPI
Sbjct: 119 GPYICAEWNFGGFPVWLKYVPGIEFRTDNGPFKAAMQKFTEKIVDMMKSEKLFEPQGGPI 178
Query: 134 ILSQIENEFGPVEWDIGAPGKAYAKWAAQMAVGLNTGVPWVMCKQDDAPDPVINTCNGFY 193
ILSQIENE+GPVEW+IGAPGKAY KWAA MAV L TGVPWVMCKQ+DAPDPVI+TCNGFY
Sbjct: 179 ILSQIENEYGPVEWEIGAPGKAYTKWAADMAVKLGTGVPWVMCKQEDAPDPVIDTCNGFY 238
Query: 194 CEKFVPNQNYKPKMWTEAWTGWFTEFGSAVPTRPAEDLVFSVARFIQSGGSFINYYMYHG 253
CE F PN++YKPKMWTEAWTGW+TEFG AVP RPAEDL FSVARFIQ+GGSFINYYMYHG
Sbjct: 239 CENFKPNKDYKPKMWTEAWTGWYTEFGGAVPNRPAEDLAFSVARFIQNGGSFINYYMYHG 298
Query: 254 GTNFGRTSGG-FVATSYDYDAPIDEYGLLNEPKWGHLRDLHKAIKLCEPALVSVDPTVKS 312
GTNFGRT+GG F+ATSYDYDAP+DEYGL EPKWGHLRDLHKAIKLCEPALVSVDPTV S
Sbjct: 299 GTNFGRTAGGPFIATSYDYDAPLDEYGLPREPKWGHLRDLHKAIKLCEPALVSVDPTVTS 358
Query: 313 LGKNQEAHVFNSKSGKCAAFLANYDTTFSAKVSFGNAQYDLPPWSISVLPDCKTAVFNTA 372
LG NQEAHVF SKS CAAFLANYDT +S KV+FGN QYDLPPWS+S+LPDCKTAVFNTA
Sbjct: 359 LGSNQEAHVFKSKSA-CAAFLANYDTKYSVKVTFGNGQYDLPPWSVSILPDCKTAVFNTA 417
Query: 373 RVGVQSSQKKFVPVINAFSWQSYIEETASSTDDNTFTKDGLWEQVYLTADASDYLWYMTD 432
R+G QSSQ K PV + FSWQSY EETAS+ D+T T DGLWEQ+ +T DA+DYLWYMT+
Sbjct: 418 RLGAQSSQMKMNPVGSTFSWQSYNEETASAYTDDTTTMDGLWEQINVTRDATDYLWYMTE 477
Query: 433 VNIDSNEGFLKNGQDPLLTIWSAGHALQVFINGQLSGTVYGSLENPKLTFSKNVKLRPGV 492
V+ID +EGFLK GQ P+LTI+SAGHAL VFINGQL+GTVYG L NPKLTFS+NVKL G+
Sbjct: 478 VHIDPDEGFLKTGQYPVLTIFSAGHALHVFINGQLAGTVYGELSNPKLTFSQNVKLTVGI 537
Query: 493 NKISLLSTSVGLPNVGTHFEKWNAGVLGPVTLKGLNEGTRDISKQKWTYKIGLKGEALSL 552
NKISLLS +VGLPNVG HFE WNAGVLGPVTLKGLNEGTRD+S KW+YKIGLKGEALSL
Sbjct: 538 NKISLLSVAVGLPNVGLHFETWNAGVLGPVTLKGLNEGTRDLSGWKWSYKIGLKGEALSL 597
Query: 553 HTVSGSSSVEWAQGASLAQKQPMTWYKTTFNVPPGNDPLALDMGAMGKGMVWINGQSIGR 612
HT++GSSSVEW +G+ LAQKQP+TWYKTTF+ P GNDPLALDM +MGKG +WINGQSIGR
Sbjct: 598 HTITGSSSVEWVEGSLLAQKQPLTWYKTTFDAPGGNDPLALDMSSMGKGQIWINGQSIGR 657
Query: 613 HWPGYIGNGNCGGCNYAGTYTEKKCRTYCGKPSQRWYHVPRSWLKPSGNLLVVFEEWGGE 672
HWP Y +G+C GCNYAGT+ +KKCRT CG+PSQRWYHVPRSWLKPSGNLL+VFEEWGG
Sbjct: 658 HWPAYTAHGSCNGCNYAGTFDDKKCRTNCGEPSQRWYHVPRSWLKPSGNLLIVFEEWGGN 717
Query: 673 PHWISLLKRTT 683
P ISL+KRTT
Sbjct: 718 PAGISLVKRTT 728
|
Length = 840 |
| >gnl|CDD|216423 pfam01301, Glyco_hydro_35, Glycosyl hydrolases family 35 | Back alignment and domain information |
|---|
| >gnl|CDD|224786 COG1874, LacA, Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 683 | |||
| PLN03059 | 840 | beta-galactosidase; Provisional | 100.0 | |
| KOG0496 | 649 | consensus Beta-galactosidase [Carbohydrate transpo | 100.0 | |
| PF01301 | 319 | Glyco_hydro_35: Glycosyl hydrolases family 35; Int | 100.0 | |
| COG1874 | 673 | LacA Beta-galactosidase [Carbohydrate transport an | 100.0 | |
| PF02449 | 374 | Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 | 99.84 | |
| PF13364 | 111 | BetaGal_dom4_5: Beta-galactosidase jelly roll doma | 99.0 | |
| PF13364 | 111 | BetaGal_dom4_5: Beta-galactosidase jelly roll doma | 98.68 | |
| PF00150 | 281 | Cellulase: Cellulase (glycosyl hydrolase family 5) | 98.49 | |
| PF02836 | 298 | Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM | 98.22 | |
| PF02837 | 167 | Glyco_hydro_2_N: Glycosyl hydrolases family 2, sug | 98.15 | |
| PRK10150 | 604 | beta-D-glucuronidase; Provisional | 98.02 | |
| smart00633 | 254 | Glyco_10 Glycosyl hydrolase family 10. | 97.99 | |
| TIGR03356 | 427 | BGL beta-galactosidase. | 97.61 | |
| PRK10340 | 1021 | ebgA cryptic beta-D-galactosidase subunit alpha; R | 97.54 | |
| PLN02161 | 531 | beta-amylase | 97.5 | |
| PRK09525 | 1027 | lacZ beta-D-galactosidase; Reviewed | 97.41 | |
| PLN00197 | 573 | beta-amylase; Provisional | 97.4 | |
| PLN02803 | 548 | beta-amylase | 97.35 | |
| PLN02705 | 681 | beta-amylase | 97.35 | |
| PLN02801 | 517 | beta-amylase | 97.34 | |
| PF01373 | 402 | Glyco_hydro_14: Glycosyl hydrolase family 14; Inte | 97.28 | |
| PLN02905 | 702 | beta-amylase | 97.25 | |
| COG3693 | 345 | XynA Beta-1,4-xylanase [Carbohydrate transport and | 97.12 | |
| PF03198 | 314 | Glyco_hydro_72: Glucanosyltransferase; InterPro: I | 97.02 | |
| COG3250 | 808 | LacZ Beta-galactosidase/beta-glucuronidase [Carboh | 96.99 | |
| PF13204 | 289 | DUF4038: Protein of unknown function (DUF4038); PD | 96.48 | |
| PRK10150 | 604 | beta-D-glucuronidase; Provisional | 96.42 | |
| PF02837 | 167 | Glyco_hydro_2_N: Glycosyl hydrolases family 2, sug | 96.3 | |
| PF00232 | 455 | Glyco_hydro_1: Glycosyl hydrolase family 1; InterP | 96.28 | |
| COG2730 | 407 | BglC Endoglucanase [Carbohydrate transport and met | 96.15 | |
| PF07745 | 332 | Glyco_hydro_53: Glycosyl hydrolase family 53; Inte | 96.14 | |
| PF00331 | 320 | Glyco_hydro_10: Glycosyl hydrolase family 10; Inte | 96.06 | |
| PF14488 | 166 | DUF4434: Domain of unknown function (DUF4434) | 96.02 | |
| PLN02998 | 497 | beta-glucosidase | 95.99 | |
| PRK09852 | 474 | cryptic 6-phospho-beta-glucosidase; Provisional | 95.97 | |
| PLN02814 | 504 | beta-glucosidase | 95.92 | |
| PRK10340 | 1021 | ebgA cryptic beta-D-galactosidase subunit alpha; R | 95.8 | |
| PRK15014 | 477 | 6-phospho-beta-glucosidase BglA; Provisional | 95.77 | |
| PRK13511 | 469 | 6-phospho-beta-galactosidase; Provisional | 95.62 | |
| PRK09593 | 478 | arb 6-phospho-beta-glucosidase; Reviewed | 95.62 | |
| TIGR01233 | 467 | lacG 6-phospho-beta-galactosidase. This enzyme is | 95.59 | |
| PLN02849 | 503 | beta-glucosidase | 95.58 | |
| PRK09589 | 476 | celA 6-phospho-beta-glucosidase; Reviewed | 95.47 | |
| PRK09525 | 1027 | lacZ beta-D-galactosidase; Reviewed | 95.34 | |
| COG3867 | 403 | Arabinogalactan endo-1,4-beta-galactosidase [Carbo | 94.97 | |
| PF14871 | 132 | GHL6: Hypothetical glycosyl hydrolase 6 | 94.37 | |
| PF02638 | 311 | DUF187: Glycosyl hydrolase like GH101; InterPro: I | 93.88 | |
| COG2723 | 460 | BglB Beta-glucosidase/6-phospho-beta-glucosidase/b | 93.31 | |
| TIGR01515 | 613 | branching_enzym alpha-1,4-glucan:alpha-1,4-glucan | 92.02 | |
| smart00642 | 166 | Aamy Alpha-amylase domain. | 91.91 | |
| TIGR00542 | 279 | hxl6Piso_put hexulose-6-phosphate isomerase, putat | 90.96 | |
| PRK09936 | 296 | hypothetical protein; Provisional | 90.35 | |
| PRK05402 | 726 | glycogen branching enzyme; Provisional | 89.55 | |
| PLN02447 | 758 | 1,4-alpha-glucan-branching enzyme | 88.92 | |
| PRK14706 | 639 | glycogen branching enzyme; Provisional | 88.5 | |
| PRK12568 | 730 | glycogen branching enzyme; Provisional | 86.48 | |
| PRK01060 | 281 | endonuclease IV; Provisional | 85.76 | |
| PF14307 | 345 | Glyco_tran_WbsX: Glycosyltransferase WbsX | 85.58 | |
| PRK09441 | 479 | cytoplasmic alpha-amylase; Reviewed | 85.5 | |
| COG1649 | 418 | Uncharacterized protein conserved in bacteria [Fun | 85.11 | |
| PRK13210 | 284 | putative L-xylulose 5-phosphate 3-epimerase; Revie | 84.92 | |
| smart00812 | 384 | Alpha_L_fucos Alpha-L-fucosidase. O-Glycosyl hydro | 84.43 | |
| PRK14705 | 1224 | glycogen branching enzyme; Provisional | 84.02 | |
| PRK12313 | 633 | glycogen branching enzyme; Provisional | 83.64 | |
| PF00128 | 316 | Alpha-amylase: Alpha amylase, catalytic domain; In | 83.41 | |
| PF13200 | 316 | DUF4015: Putative glycosyl hydrolase domain | 82.63 | |
| TIGR02402 | 542 | trehalose_TreZ malto-oligosyltrehalose trehalohydr | 80.36 | |
| PLN02960 | 897 | alpha-amylase | 80.04 |
| >PLN03059 beta-galactosidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-185 Score=1576.15 Aligned_cols=679 Identities=81% Similarity=1.418 Sum_probs=630.5
Q ss_pred CcceecccCCCCcccHHHHHHHHHHCCCCEEEEcccCCccCCcCCeeeeccchhHHHHHHHHHHcCcEEEeecCceeccc
Q 005690 1 MGSFYFSFFFIWLQMWPDLIQKAKDGGLDVIQTYVFWNGHEPTQGNYYFQDRYDLVRFIKLVQQAGLYVHLRIGPYVCAE 80 (683)
Q Consensus 1 ~~e~~~~~~r~~~~~W~d~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~dF~G~~dl~~fl~~a~~~GL~VilrpGPyi~aE 80 (683)
.|||| |||++|++|+|||+||||+|+|||+||||||+|||+||+|||+|++||++||++|+|+|||||||||||||||
T Consensus 48 sG~iH--Y~R~~p~~W~d~L~k~Ka~GlNtV~tYV~Wn~HEp~~G~~dF~G~~DL~~Fl~la~e~GLyvilRpGPYIcAE 125 (840)
T PLN03059 48 SGSIH--YPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGNYYFEDRYDLVKFIKVVQAAGLYVHLRIGPYICAE 125 (840)
T ss_pred EeCcc--cCcCCHHHHHHHHHHHHHcCCCeEEEEecccccCCCCCeeeccchHHHHHHHHHHHHcCCEEEecCCcceeee
Confidence 48998 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCccccccCCeEeecCChhhHHHHHHHHHHHHHHHhhcccccccCCceEeccccccCCCccccCCCCcHHHHHHH
Q 005690 81 WNYGGFPVWLKYVPGIEFRTDNGPFKAAMHKFTEKIVSMMKAEKLFQTQGGPIILSQIENEFGPVEWDIGAPGKAYAKWA 160 (683)
Q Consensus 81 w~~GG~P~WL~~~p~~~~Rt~~~~y~~~~~~~~~~l~~~l~~~~~~~~~gGpII~~QiENEyg~~~~~~~~~~~~y~~~l 160 (683)
|++||||.||+++|+|++||+|++|+++|++|+++|+++|+++++++++||||||+|||||||++...++.+|++||+||
T Consensus 126 w~~GGlP~WL~~~~~i~~Rs~d~~fl~~v~~~~~~l~~~l~~~~l~~~~GGPIImvQIENEYGs~~~~~~~~d~~Yl~~l 205 (840)
T PLN03059 126 WNFGGFPVWLKYVPGIEFRTDNGPFKAAMQKFTEKIVDMMKSEKLFEPQGGPIILSQIENEYGPVEWEIGAPGKAYTKWA 205 (840)
T ss_pred ecCCCCchhhhcCCCcccccCCHHHHHHHHHHHHHHHHHHhhcceeecCCCcEEEEEecccccceecccCcchHHHHHHH
Confidence 99999999999999999999999999999999999999998889999999999999999999998777777899999999
Q ss_pred HHHHhhCCCCcceeeecCCCCCCccccCCCCccccccCCCCCCCCceeeeccccccCccCCCCCCCChHHHHHHHHHHHH
Q 005690 161 AQMAVGLNTGVPWVMCKQDDAPDPVINTCNGFYCEKFVPNQNYKPKMWTEAWTGWFTEFGSAVPTRPAEDLVFSVARFIQ 240 (683)
Q Consensus 161 ~~~~~~~g~~vp~~~~~~~~~~~~~~~t~~g~~~~~~~~~~p~~P~~~~E~~~Gwf~~wG~~~~~~~~~~~~~~~~~~l~ 240 (683)
+++++++|++|||+||++.++++++++||||.+|+.|.+.++.+|+|+||||+|||++||++++.|+++|++.+++++|+
T Consensus 206 ~~~~~~~Gi~VPl~t~dg~~~~~~v~~t~Ng~~~~~f~~~~~~~P~m~tE~w~GWf~~wG~~~~~r~~~d~a~~~~~~l~ 285 (840)
T PLN03059 206 ADMAVKLGTGVPWVMCKQEDAPDPVIDTCNGFYCENFKPNKDYKPKMWTEAWTGWYTEFGGAVPNRPAEDLAFSVARFIQ 285 (840)
T ss_pred HHHHHHcCCCcceEECCCCCCCccceecCCCchhhhcccCCCCCCcEEeccCchhHhhcCCCCCcCCHHHHHHHHHHHHH
Confidence 99999999999999999988888899999999999998887889999999999999999999999999999999999999
Q ss_pred cCCeeeeeeeeccCCCCCCCCCC-CcccccCCCCCcCccCCCCchhHHHHHHHHHHHHhhcCCCCCCCCccccCCCCcce
Q 005690 241 SGGSFINYYMYHGGTNFGRTSGG-FVATSYDYDAPIDEYGLLNEPKWGHLRDLHKAIKLCEPALVSVDPTVKSLGKNQEA 319 (683)
Q Consensus 241 ~g~s~~n~YM~hGGTNfG~~~g~-~~~tSYDy~Apl~E~G~~~t~Ky~~lr~l~~~~~~~~~~l~~~~p~~~~~~~~~~~ 319 (683)
+|+|++||||||||||||||+|+ +++|||||||||+|+|++++|||.+||++|++++.+++.++..+|....+|+.+++
T Consensus 286 ~g~S~~N~YMfhGGTNFG~~~Ga~~~~TSYDYdAPL~E~G~~t~pKy~~lr~l~~~~~~~~~~l~~~~p~~~~lg~~~ea 365 (840)
T PLN03059 286 NGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLPREPKWGHLRDLHKAIKLCEPALVSVDPTVTSLGSNQEA 365 (840)
T ss_pred cCCeeEEeeeccCcCCcccccCCCccccccccCCccccccCcchhHHHHHHHHHHHHHhcCccccCCCCceeccCCceeE
Confidence 99998899999999999999998 59999999999999999966799999999999999988888888877789999999
Q ss_pred eEeccCCCccceeecccCCccceeEeecCccccCCCcceeecCCcccccccccccccccccceeeecccccccccccccc
Q 005690 320 HVFNSKSGKCAAFLANYDTTFSAKVSFGNAQYDLPPWSISVLPDCKTAVFNTARVGVQSSQKKFVPVINAFSWQSYIEET 399 (683)
Q Consensus 320 ~~~~~~~~~~~~fl~n~~~~~~~~v~~~~~~~~~~~~~v~il~~~~~~~~~t~~v~~~~~~~~~~~~~~~~~~~~~~e~~ 399 (683)
.+|.... .|++|+.|++.+...+|.|++++|.+|+|||||||||+.++|+|+++..|++.+.+++....+.|++++|++
T Consensus 366 ~~y~~~~-~caaFl~n~~~~~~~~v~f~g~~y~lp~~Svsilpd~~~~lfnta~v~~q~~~~~~~~~~~~~~w~~~~e~~ 444 (840)
T PLN03059 366 HVFKSKS-ACAAFLANYDTKYSVKVTFGNGQYDLPPWSVSILPDCKTAVFNTARLGAQSSQMKMNPVGSTFSWQSYNEET 444 (840)
T ss_pred EEccCcc-chhhheeccCCCCceeEEECCcccccCccceeecccccceeeeccccccccceeecccccccccceeecccc
Confidence 9998766 799999999989999999999999999999999999999999999998887666555554457899999984
Q ss_pred -cCCCCCCCcccCchhhhhcccCCCcceEEEEEEecCCCCcccccCCCCCceEecCcceEEEEEECCEEEEEEEcccCCC
Q 005690 400 -ASSTDDNTFTKDGLWEQVYLTADASDYLWYMTDVNIDSNEGFLKNGQDPLLTIWSAGHALQVFINGQLSGTVYGSLENP 478 (683)
Q Consensus 400 -~~~~~~~~~~~~~~~Eql~~t~d~~Gyl~Yrt~i~~~~~~~~~~~g~~~~L~i~~~~d~a~vfvng~~~G~~~~~~~~~ 478 (683)
+...+ .+++.++++||+++|+|.+||+||||+|..+.++..++++.+++|+|.+++|++||||||+++|+.+++....
T Consensus 445 ~~~~~~-~~~~~e~l~e~~n~t~d~~dYlwY~t~i~~~~~~~~~~~~~~~~L~v~~~~d~~~vFVNg~~~Gt~~~~~~~~ 523 (840)
T PLN03059 445 ASAYTD-DTTTMDGLWEQINVTRDATDYLWYMTEVHIDPDEGFLKTGQYPVLTIFSAGHALHVFINGQLAGTVYGELSNP 523 (840)
T ss_pred cccccC-CCcchhhHHHhhcccCCCCceEEEEEEEeecCCccccccCCCceEEEcccCcEEEEEECCEEEEEEEeecCCc
Confidence 43333 3788899999999999999999999999886655445667788999999999999999999999999987777
Q ss_pred eeEEeeeeecCCCccEEEEEEecCCcccccccccccccceeccEEEccccCcceecccCeeEEEecCccccccccccCCC
Q 005690 479 KLTFSKNVKLRPGVNKISLLSTSVGLPNVGTHFEKWNAGVLGPVTLKGLNEGTRDISKQKWTYKIGLKGEALSLHTVSGS 558 (683)
Q Consensus 479 ~~~~~~~~~l~~g~~~L~ILven~Gr~NyG~~~~~~~kGI~g~V~l~g~~~g~~~L~~~~W~~~~~l~ge~~~~~~~~~~ 558 (683)
.++++.+++++.|.|+|+||||||||+|||++|+++.|||+|+|+|+|.+.+..+|++|.|.|+++|.||.++++..++.
T Consensus 524 ~~~~~~~v~l~~g~n~L~iLse~vG~~NyG~~le~~~kGI~g~V~i~g~~~g~~dls~~~W~y~lgL~GE~~~i~~~~~~ 603 (840)
T PLN03059 524 KLTFSQNVKLTVGINKISLLSVAVGLPNVGLHFETWNAGVLGPVTLKGLNEGTRDLSGWKWSYKIGLKGEALSLHTITGS 603 (840)
T ss_pred ceEEecccccCCCceEEEEEEEeCCCCccCcccccccccccccEEEecccCCceecccCccccccCccceeccccccCCC
Confidence 88998888899999999999999999999999999999999999999988888899999999999999999999987656
Q ss_pred CCccccccCccCCCCCceEEEEEEECCCCCCCeEEecCCCceEEEEEcCccccccccCCCCCCCCCCCCCCCcccccccc
Q 005690 559 SSVEWAQGASLAQKQPMTWYKTTFNVPPGNDPLALDMGAMGKGMVWINGQSIGRHWPGYIGNGNCGGCNYAGTYTEKKCR 638 (683)
Q Consensus 559 ~~~~w~~~~~~~~~~~~~fYk~~F~~~~~~d~~~Ld~~g~gKG~vwVNG~nlGRYW~~~~~~G~~~~~~~~g~~~~~~~~ 638 (683)
.+++|++.+..+..+||+|||++|++|++.|||||||++||||+|||||+||||||+.+...++|+.|+|+|.|++.||+
T Consensus 604 ~~~~W~~~~~~~~~~p~twYK~~Fd~p~g~Dpv~LDm~gmGKG~aWVNG~nIGRYW~~~a~~~gC~~c~y~g~~~~~kc~ 683 (840)
T PLN03059 604 SSVEWVEGSLLAQKQPLTWYKTTFDAPGGNDPLALDMSSMGKGQIWINGQSIGRHWPAYTAHGSCNGCNYAGTFDDKKCR 683 (840)
T ss_pred CCccccccccccCCCCceEEEEEEeCCCCCCCEEEecccCCCeeEEECCcccccccccccccCCCccccccccccchhhh
Confidence 67889776544445679999999999999999999999999999999999999999752224678999999999999999
Q ss_pred cCCCCCeeeEeecCcccccCCCcEEEEEEecCCCCccEEEEEEeC
Q 005690 639 TYCGKPSQRWYHVPRSWLKPSGNLLVVFEEWGGEPHWISLLKRTT 683 (683)
Q Consensus 639 ~~~g~PqqtlYhVP~~~Lk~g~N~IvvfEe~g~~p~~i~l~~~~~ 683 (683)
||||+|||||||||++|||+|+|+||||||+|++|..|+|+++++
T Consensus 684 ~~cggP~q~lYHVPr~~Lk~g~N~lViFEe~gg~p~~I~~~~~~~ 728 (840)
T PLN03059 684 TNCGEPSQRWYHVPRSWLKPSGNLLIVFEEWGGNPAGISLVKRTT 728 (840)
T ss_pred ccCCCceeEEEeCcHHHhccCCceEEEEEecCCCCCceEEEEeec
Confidence 999999999999999999999999999999999999999999864
|
|
| >KOG0496 consensus Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >COG1874 LacA Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF13364 BetaGal_dom4_5: Beta-galactosidase jelly roll domain; PDB: 1TG7_A 1XC6_A 3OGS_A 3OGV_A 3OGR_A 3OG2_A | Back alignment and domain information |
|---|
| >PF13364 BetaGal_dom4_5: Beta-galactosidase jelly roll domain; PDB: 1TG7_A 1XC6_A 3OGS_A 3OGV_A 3OGR_A 3OG2_A | Back alignment and domain information |
|---|
| >PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF02837 Glyco_hydro_2_N: Glycosyl hydrolases family 2, sugar binding domain; InterPro: IPR006104 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PRK10150 beta-D-glucuronidase; Provisional | Back alignment and domain information |
|---|
| >smart00633 Glyco_10 Glycosyl hydrolase family 10 | Back alignment and domain information |
|---|
| >TIGR03356 BGL beta-galactosidase | Back alignment and domain information |
|---|
| >PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed | Back alignment and domain information |
|---|
| >PLN02161 beta-amylase | Back alignment and domain information |
|---|
| >PRK09525 lacZ beta-D-galactosidase; Reviewed | Back alignment and domain information |
|---|
| >PLN00197 beta-amylase; Provisional | Back alignment and domain information |
|---|
| >PLN02803 beta-amylase | Back alignment and domain information |
|---|
| >PLN02705 beta-amylase | Back alignment and domain information |
|---|
| >PLN02801 beta-amylase | Back alignment and domain information |
|---|
| >PF01373 Glyco_hydro_14: Glycosyl hydrolase family 14; InterPro: IPR001554 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PLN02905 beta-amylase | Back alignment and domain information |
|---|
| >COG3693 XynA Beta-1,4-xylanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane | Back alignment and domain information |
|---|
| >COG3250 LacZ Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF13204 DUF4038: Protein of unknown function (DUF4038); PDB: 3KZS_D | Back alignment and domain information |
|---|
| >PRK10150 beta-D-glucuronidase; Provisional | Back alignment and domain information |
|---|
| >PF02837 Glyco_hydro_2_N: Glycosyl hydrolases family 2, sugar binding domain; InterPro: IPR006104 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >COG2730 BglC Endoglucanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF14488 DUF4434: Domain of unknown function (DUF4434) | Back alignment and domain information |
|---|
| >PLN02998 beta-glucosidase | Back alignment and domain information |
|---|
| >PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional | Back alignment and domain information |
|---|
| >PLN02814 beta-glucosidase | Back alignment and domain information |
|---|
| >PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed | Back alignment and domain information |
|---|
| >PRK15014 6-phospho-beta-glucosidase BglA; Provisional | Back alignment and domain information |
|---|
| >PRK13511 6-phospho-beta-galactosidase; Provisional | Back alignment and domain information |
|---|
| >PRK09593 arb 6-phospho-beta-glucosidase; Reviewed | Back alignment and domain information |
|---|
| >TIGR01233 lacG 6-phospho-beta-galactosidase | Back alignment and domain information |
|---|
| >PLN02849 beta-glucosidase | Back alignment and domain information |
|---|
| >PRK09589 celA 6-phospho-beta-glucosidase; Reviewed | Back alignment and domain information |
|---|
| >PRK09525 lacZ beta-D-galactosidase; Reviewed | Back alignment and domain information |
|---|
| >COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF14871 GHL6: Hypothetical glycosyl hydrolase 6 | Back alignment and domain information |
|---|
| >PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function | Back alignment and domain information |
|---|
| >COG2723 BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase | Back alignment and domain information |
|---|
| >smart00642 Aamy Alpha-amylase domain | Back alignment and domain information |
|---|
| >TIGR00542 hxl6Piso_put hexulose-6-phosphate isomerase, putative | Back alignment and domain information |
|---|
| >PRK09936 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK05402 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
| >PLN02447 1,4-alpha-glucan-branching enzyme | Back alignment and domain information |
|---|
| >PRK14706 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
| >PRK12568 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
| >PRK01060 endonuclease IV; Provisional | Back alignment and domain information |
|---|
| >PF14307 Glyco_tran_WbsX: Glycosyltransferase WbsX | Back alignment and domain information |
|---|
| >PRK09441 cytoplasmic alpha-amylase; Reviewed | Back alignment and domain information |
|---|
| >COG1649 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PRK13210 putative L-xylulose 5-phosphate 3-epimerase; Reviewed | Back alignment and domain information |
|---|
| >smart00812 Alpha_L_fucos Alpha-L-fucosidase | Back alignment and domain information |
|---|
| >PRK14705 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
| >PRK12313 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
| >PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF13200 DUF4015: Putative glycosyl hydrolase domain | Back alignment and domain information |
|---|
| >TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase | Back alignment and domain information |
|---|
| >PLN02960 alpha-amylase | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 683 | ||||
| 3d3a_A | 612 | Crystal Structure Of A Beta-Galactosidase From Bact | 1e-34 | ||
| 3thc_A | 654 | Crystal Structure Of Human Beta-Galactosidase In Co | 2e-33 | ||
| 4e8c_A | 595 | Crystal Structure Of Streptococcal Beta-Galactosida | 6e-30 | ||
| 4e8c_A | 595 | Crystal Structure Of Streptococcal Beta-Galactosida | 2e-06 | ||
| 1tg7_A | 971 | Native Structure Of Beta-Galactosidase From Penicil | 8e-20 | ||
| 3og2_A | 1003 | Native Crystal Structure Of Trichoderma Reesei Beta | 4e-18 |
| >pdb|3D3A|A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron Length = 612 | Back alignment and structure |
|
| >pdb|3THC|A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose Length = 654 | Back alignment and structure |
| >pdb|4E8C|A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose Length = 595 | Back alignment and structure |
| >pdb|4E8C|A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose Length = 595 | Back alignment and structure |
| >pdb|1TG7|A Chain A, Native Structure Of Beta-Galactosidase From Penicillium Sp. Length = 971 | Back alignment and structure |
| >pdb|3OG2|A Chain A, Native Crystal Structure Of Trichoderma Reesei Beta-Galactosidase Length = 1003 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* Length = 1003 | Back alignment and structure |
|---|
Score = 448 bits (1153), Expect = e-145
Identities = 137/777 (17%), Positives = 236/777 (30%), Gaps = 125/777 (16%)
Query: 14 QMWPDLIQKAKDGGLDVIQTYVFWNGHEPTQGNYYFQDRYDLVRFIKLVQQAGLYVHLRI 73
++ D+ K K G + + YV W E G + + L F + +AG+Y+ R
Sbjct: 56 SLYLDVFHKIKALGFNTVSFYVDWALLEGKPGRFRADGIFSLEPFFEAATKAGIYLLARP 115
Query: 74 GPYVCAEWNYGGFPVWLKYVPGIEFRTDNGPFKAAMHKFTEKIVSMMKAEKLFQTQGGPI 133
GPY+ AE + GGFP WL+ V G + RTD + A + I S++ K T GGP+
Sbjct: 116 GPYINAEVSGGGFPGWLQRVKG-KLRTDAPDYLHATDNYVAHIASIIA--KAQITNGGPV 172
Query: 134 ILSQIENEFGPVEWDIGAPGKAYAKWAAQMAVGLNTGVPWVMC----KQDDAPDPVINTC 189
IL Q ENE+ + P K Y ++ A VP + AP + +
Sbjct: 173 ILYQPENEYSGAAEGVLFPNKPYMQYVIDQARNAGIIVPLINNDAFPGGTGAPGTGLGSV 232
Query: 190 NGFYCEKFVPN-------------------------QNYKPKMWTEAWTGWFTEFGSAVP 224
+ + + + P E G F FG
Sbjct: 233 DIYGHDGYPLGFDCAHPSAWPDNGLPTTWRQDHLNISPSTPFSLVEFQGGAFDPFGGWGF 292
Query: 225 TRPAEDLVFSVARFIQ-----SGGSFINYYMYHGGTNFGRTSGGFVATSYDYDAPIDEYG 279
+ + + R +G + N YM GGTN+G TSYDY A I E
Sbjct: 293 EQCSALVNHEFERVFYKNNMAAGVTIFNIYMTFGGTNWGNLGHPGGYTSYDYGASIREDR 352
Query: 280 LLNEPKWGHLRDLHKAIKLCEPALVSVDP--TVKSLGKNQEAHVFNSKSGKCAAFLANY- 336
++ K+ L+ + +K+ + + T +Q + + + F
Sbjct: 353 RIDREKYSELKLQGQFLKVSPGYITATPENATQGVYSDSQNIVITPLLAKESGDFFVVRH 412
Query: 337 -------DTTFSAKVSFGNAQYDLPPWSISVLPDCKTAVFNTARVGVQSSQKKFVPVINA 389
+++ K+ +P S+ + + + V +
Sbjct: 413 ANYSSTDTASYTVKLPTSAGDLTIPQLGGSLTLTGRDSKIHVTDYPVGKFTLLYSTA-EI 471
Query: 390 FSWQSYIEET----------------ASSTDDNTFTKDGLWEQVYLTADASDYLWYMTDV 433
F+W + E+T + + K E +T + L +
Sbjct: 472 FTWNEFAEKTVLVLYGGAQELHEFAVKNPFGSSKTAKAKKIEGSNVTIHTTSNLTVVLQW 531
Query: 434 NIDSNEGFLKNGQDPLLTIWSAGHALQVFINGQLSGTVYGSLENPKLTFSKNVK------ 487
S ++ G + + A + L G+ S L +V
Sbjct: 532 TASSARQVVQLGSLVIYMVDRN-SAYN-YWVPTLPGSGKQSAYGSSLMNPDSVIINGGYL 589
Query: 488 LRPGVNKISLLSTSVGLPNVGTHFEKWNA-GVLGPVTLKGLNEGTRDISKQKWTYKIGLK 546
+R K + LS NV T E + + + G G W ++
Sbjct: 590 IRSVAIKGNALSVQ-ADFNVTTPLEIIGIPKGISKLAVNGKELGYSVSELGDWIAHPAIE 648
Query: 547 GEALSLHTVSGSSSVEWAQGASLAQKQP-------------------------------- 574
+ + + + ++W + SL + +
Sbjct: 649 IPHVQVPEL---TKLKWYKVDSLPEIRSNYDDSRWPLANLRTSNNTYAPLKTPVSLYGSD 705
Query: 575 ------MTWYKTTFNVPPGNDPLALDM--GAMGKGMVWINGQSIGRHWPGYIGNGN---- 622
++ F L L G+ VW+N + IG + G+
Sbjct: 706 YGFHAGTLLFRGRFTARTARQQLFLSTQGGSAFASSVWLNDRFIGS-FTGFDAASAANSS 764
Query: 623 --CGGCNYAGTYTEKKCRTYCGKPSQRWYHVPRSWLKPSGNLLVVFEEWGGEPHWIS 677
Y G + W S P G L G IS
Sbjct: 765 YTLDRLVRGRRYILTVVVDSTGLD-ENWTTGDDSMKAPRGILDYALTSSSGANVSIS 820
|
| >3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* Length = 1003 | Back alignment and structure |
|---|
| >1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* Length = 971 | Back alignment and structure |
|---|
| >1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* Length = 971 | Back alignment and structure |
|---|
| >4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A Length = 595 | Back alignment and structure |
|---|
| >3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} Length = 612 | Back alignment and structure |
|---|
| >3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} Length = 612 | Back alignment and structure |
|---|
| >3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* Length = 654 | Back alignment and structure |
|---|
| >3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* Length = 654 | Back alignment and structure |
|---|
| >3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} Length = 552 | Back alignment and structure |
|---|
| >3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* Length = 675 | Back alignment and structure |
|---|
| >1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Length = 645 | Back alignment and structure |
|---|
| >3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} Length = 692 | Back alignment and structure |
|---|
| >3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} Length = 667 | Back alignment and structure |
|---|
| >3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} Length = 801 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 683 | |||
| 4e8d_A | 595 | Glycosyl hydrolase, family 35; TIM barrel, beta-pr | 100.0 | |
| 3thd_A | 654 | Beta-galactosidase; TIM-barrel domain, glycosyl hy | 100.0 | |
| 3d3a_A | 612 | Beta-galactosidase; protein structure initiative I | 100.0 | |
| 1tg7_A | 971 | Beta-galactosidase; TIM barrel domain, glycoside h | 100.0 | |
| 3og2_A | 1003 | Beta-galactosidase; TIM barrel domain, glycoside h | 100.0 | |
| 3u7v_A | 552 | Beta-galactosidase; structural genomics, PSI-biolo | 99.97 | |
| 1vem_A | 516 | Beta-amylase; beta-alpha-barrels, optimum PH, hydr | 99.88 | |
| 3tty_A | 675 | Beta-GAL, beta-galactosidase; TIM barrel, glycosid | 99.86 | |
| 1kwg_A | 645 | Beta-galactosidase; TIM barrel, glycoside hydrolas | 99.86 | |
| 3pzg_A | 383 | Mannan endo-1,4-beta-mannosidase. glycosyl hydrol | 99.55 | |
| 2osx_A | 481 | Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel | 99.44 | |
| 1rh9_A | 373 | Endo-beta-mannanase; endo-beta-mannase, retaining, | 99.35 | |
| 1yq2_A | 1024 | Beta-galactosidase; glycosyl hydrolase family 2, T | 99.26 | |
| 1uuq_A | 440 | Mannosyl-oligosaccharide glucosidase; hydrolase, m | 99.14 | |
| 1qnr_A | 344 | Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt | 99.04 | |
| 3cmg_A | 667 | Putative beta-galactosidase; structural genomics, | 98.98 | |
| 4hty_A | 359 | Cellulase; (alpha/beta)8 barrel, family 5 endogluc | 98.89 | |
| 3fn9_A | 692 | Putative beta-galactosidase; structural genomics, | 98.81 | |
| 3hn3_A | 613 | Beta-G1, beta-glucuronidase; lysosomal enzyme, aci | 98.76 | |
| 1xyz_A | 347 | 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola | 98.75 | |
| 3gm8_A | 801 | Glycoside hydrolase family 2, candidate beta-GLYC; | 98.75 | |
| 1bqc_A | 302 | Protein (beta-mannanase); glycosyl hydrolase, fami | 98.71 | |
| 3cui_A | 315 | EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine | 98.71 | |
| 1nq6_A | 302 | XYS1; glycoside hydrolase family 10, xylanase, xyl | 98.71 | |
| 1ece_A | 358 | Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. | 98.68 | |
| 2dep_A | 356 | Xylanase B, thermostable celloxylanase; glycosidas | 98.67 | |
| 1n82_A | 331 | Xylanase, intra-cellular xylanase; hydrolase; 1.45 | 98.66 | |
| 1vjz_A | 341 | Endoglucanase; TM1752, structural genomics, JCSG, | 98.64 | |
| 2c0h_A | 353 | Mannan endo-1,4-beta-mannosidase; hydrolase, signa | 98.63 | |
| 1ceo_A | 343 | Cellulase CELC; glycosyl hydrolase, family A/5 of | 98.61 | |
| 2uwf_A | 356 | Endoxylanase, alkaline active endoxylanase; hydrol | 98.61 | |
| 3n9k_A | 399 | Glucan 1,3-beta-glucosidase; aromatic entranceway/ | 98.6 | |
| 1i1w_A | 303 | Endo-1,4-beta-xylanase; xylan degradation, hydrola | 98.59 | |
| 1v0l_A | 313 | Endo-1,4-beta-xylanase A; glycoside hydrolase fami | 98.57 | |
| 1h4p_A | 408 | Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca | 98.55 | |
| 1ta3_B | 303 | Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), | 98.54 | |
| 1us2_A | 530 | Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca | 98.53 | |
| 2w61_A | 555 | GAS2P, glycolipid-anchored surface protein 2; glyc | 98.53 | |
| 1ur1_A | 378 | Endoxylanase; hydrolase, family 10, glycoside hydr | 98.52 | |
| 2d1z_A | 436 | Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en | 98.51 | |
| 3nco_A | 320 | Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 | 98.49 | |
| 1edg_A | 380 | Endoglucanase A; family A, cellulases, xylanases, | 98.48 | |
| 3aof_A | 317 | Endoglucanase; glycosyl hydrolase family 5, cellul | 98.48 | |
| 1hjs_A | 332 | Beta-1,4-galactanase; 4-galactanases, family 53 gl | 98.47 | |
| 4awe_A | 387 | Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana | 98.47 | |
| 1r85_A | 379 | Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A | 98.43 | |
| 3vup_A | 351 | Beta-1,4-mannanase; TIM barrel, digestive fluid, H | 98.41 | |
| 2jep_A | 395 | Xyloglucanase; family 5, plant cell WALL, hydrolas | 98.41 | |
| 1vff_A | 423 | Beta-glucosidase; glycosyl hydrolase, membrane-bou | 98.37 | |
| 3civ_A | 343 | Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. | 98.36 | |
| 1h1n_A | 305 | Endo type cellulase ENGI; hydrolase, glycosyl hydr | 98.36 | |
| 3ndz_A | 345 | Endoglucanase D; cellotriose, xylanase, carbohydra | 98.34 | |
| 1w32_A | 348 | Endo-1,4-beta-xylanase A precursor; mutant, calciu | 98.34 | |
| 3lpf_A | 605 | Beta-glucuronidase; alpha/beta barrel, sugar-bindi | 98.32 | |
| 3pzt_A | 327 | Endoglucanase; alpha/beta barrel, glycosyl hydrola | 98.3 | |
| 3icg_A | 515 | Endoglucanase D; cellulase, xylanase, carbohydrate | 98.29 | |
| 3ayr_A | 376 | Endoglucanase; TIM barrel, hydrolase, carbohydrate | 98.29 | |
| 3l55_A | 353 | B-1,4-endoglucanase/cellulase; putative beta-1,4-e | 98.29 | |
| 1tvn_A | 293 | Cellulase, endoglucanase G; glycoside hydrolase, C | 98.27 | |
| 1egz_A | 291 | Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL | 98.24 | |
| 3qho_A | 458 | Endoglucanase, 458AA long hypothetical endo-1,4-be | 98.23 | |
| 1qox_A | 449 | Beta-glucosidase; hydrolase, cellulose degradation | 98.19 | |
| 2o9p_A | 454 | Beta-glucosidase B; family 1 glycoside hydrolase; | 98.17 | |
| 2j78_A | 468 | Beta-glucosidase A; family 1, hydrolase, inhibitor | 98.12 | |
| 2je8_A | 848 | Beta-mannosidase; glycoside hydrolase, hydrolase; | 98.11 | |
| 1jz7_A | 1023 | Lactase, beta-galactosidase, LACZ; TIM barrel (alp | 98.1 | |
| 3bga_A | 1010 | Beta-galactosidase; NYSGXRC, protein structure ini | 98.1 | |
| 3jug_A | 345 | Beta-mannanase; TIM-barrel, glycosidase, hydrolase | 98.1 | |
| 7a3h_A | 303 | Endoglucanase; hydrolase, cellulose degradation, g | 98.1 | |
| 3qr3_A | 340 | Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A | 98.08 | |
| 1wcg_A | 464 | Thioglucosidase, myrosinase; aphid, beta-glucosida | 98.06 | |
| 2whl_A | 294 | Beta-mannanase, baman5; glycoside hydrolase, hydro | 98.04 | |
| 3ahx_A | 453 | Beta-glucosidase A; cellulases, glycosyl hydrolase | 98.04 | |
| 2e9l_A | 469 | Cytosolic beta-glucosidase; novel cytosolic neutra | 98.04 | |
| 4ekj_A | 500 | Beta-xylosidase; TIM-barrel fold, hemicellulase, h | 98.0 | |
| 3oba_A | 1032 | Beta-galactosidase; TIM barrel, tetramer, GH2, gly | 97.99 | |
| 2y8k_A | 491 | Arabinoxylanase, carbohydrate binding family 6; hy | 97.99 | |
| 1fob_A | 334 | Beta-1,4-galactanase; B/A barrel, glycosyl hydrola | 97.98 | |
| 3fj0_A | 465 | Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase | 97.97 | |
| 3apg_A | 473 | Beta-glucosidase; TIM barrel, hydrolase, sugar bin | 97.94 | |
| 1v08_A | 512 | Beta-glucosidase; glycoside hydrolase, dimboa-gluc | 97.94 | |
| 1qvb_A | 481 | Beta-glycosidase; TIM-barrel, thermostable, hydrol | 97.88 | |
| 3emz_A | 331 | Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 ba | 97.88 | |
| 1e4m_M | 501 | Myrosinase MA1; hydrolase, family 1 glycosyl hydro | 97.87 | |
| 1e4i_A | 447 | Beta-glucosidase; hydrolase, family 1 glycosyl hyd | 97.84 | |
| 2dga_A | 565 | Beta-glucosidase; alpha/beta barrel, hydrolase; 1. | 97.84 | |
| 1ug6_A | 431 | Beta-glycosidase; glucosidase, atomic resolution, | 97.83 | |
| 3ahy_A | 473 | Beta-glucosidase; cellulases, glycosyl hydrolase, | 97.82 | |
| 2e3z_A | 465 | Beta-glucosidase; TIM barrel, glycoside hydrolase | 97.82 | |
| 2xhy_A | 479 | BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, | 97.8 | |
| 1v02_A | 565 | Dhurrinase, dhurrinase-1; beta-glucosidase, dhurri | 97.79 | |
| 1wdp_A | 495 | Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.2 | 97.77 | |
| 1cbg_A | 490 | Cyanogenic beta-glucosidase; hydrolase (O-glycosyl | 97.77 | |
| 2cks_A | 306 | Endoglucanase E-5; carbohydrate metabolism, polysa | 97.76 | |
| 1pbg_A | 468 | PGAL, 6-phospho-beta-D-galactosidase; hydrolase (g | 97.76 | |
| 1fa2_A | 498 | Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.3 | 97.73 | |
| 2xfr_A | 535 | Beta-amylase; hydrolase, carbohydrate metabolism, | 97.73 | |
| 2jf7_A | 532 | Strictosidine-O-beta-D-glucosidase; alkaloid, hydr | 97.72 | |
| 1ur4_A | 399 | Galactanase; hydrolase, beta-1, glycoside hydrolas | 97.68 | |
| 1wky_A | 464 | Endo-beta-1,4-mannanase; TIM barrel, catalytic dom | 97.58 | |
| 1g01_A | 364 | Endoglucanase; alpha/beta barrel, TIM barrel, hydr | 97.49 | |
| 3niy_A | 341 | Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 | 97.49 | |
| 4f8x_A | 335 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 97.48 | |
| 1uhv_A | 500 | Beta-xylosidase; family 39 glycoside hydrolase, xy | 97.45 | |
| 1w91_A | 503 | Beta-xylosidase; MAD, seMet, tetramer, hydrolase; | 97.44 | |
| 1gnx_A | 479 | Beta-glucosidase; hydrolase, glycosyltransferase, | 97.37 | |
| 3u7b_A | 327 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 97.37 | |
| 2vzs_A | 1032 | CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, | 97.32 | |
| 4b3l_A | 479 | Beta-glucosidase; hydrolase, glycosidase, carbohyd | 97.12 | |
| 3gnp_A | 488 | OS03G0212800 protein; beta-alpha barrel, glycosida | 97.08 | |
| 2nt0_A | 497 | Glucosylceramidase; cerezyme, glucocerebrosidase, | 97.04 | |
| 3f5l_A | 481 | Beta-glucosidase; beta-alpha-barrels, glycosidase, | 97.0 | |
| 3gyc_A | 393 | Putative glycoside hydrolase; YP_001304622.1, stru | 97.0 | |
| 4hz8_A | 444 | Beta-glucosidase; BGLB,BGL, hydrolase, glycosid ba | 96.95 | |
| 3fn9_A | 692 | Putative beta-galactosidase; structural genomics, | 96.9 | |
| 3lpf_A | 605 | Beta-glucuronidase; alpha/beta barrel, sugar-bindi | 96.87 | |
| 3gm8_A | 801 | Glycoside hydrolase family 2, candidate beta-GLYC; | 96.83 | |
| 4h41_A | 340 | Putative alpha-L-fucosidase; hydrolase, carbohydra | 96.83 | |
| 3hn3_A | 613 | Beta-G1, beta-glucuronidase; lysosomal enzyme, aci | 96.67 | |
| 3ro8_A | 341 | Endo-1,4-beta-xylanase; glycosyl hydrolase family | 96.65 | |
| 3kzs_A | 463 | Glycosyl hydrolase family 5; structural genomics, | 96.63 | |
| 3cmg_A | 667 | Putative beta-galactosidase; structural genomics, | 96.58 | |
| 3ta9_A | 458 | Glycoside hydrolase family 1; TIM barrel, glucosid | 96.43 | |
| 3bga_A | 1010 | Beta-galactosidase; NYSGXRC, protein structure ini | 96.23 | |
| 4atd_A | 513 | Raucaffricine-O-beta-D-glucosidase; alkaloid, hydr | 96.11 | |
| 3vii_A | 487 | Beta-glucosidase; cellulases, glycosyl hydrolase, | 96.06 | |
| 2y24_A | 383 | Xylanase; hydrolase, GH5 family, aldotetraouronic | 96.06 | |
| 3ptm_A | 505 | Beta-glucosidase OS4BGlu12; beta-alpha barrel, gly | 96.0 | |
| 3qom_A | 481 | 6-phospho-beta-glucosidase; structural genomics, P | 95.9 | |
| 1yq2_A | 1024 | Beta-galactosidase; glycosyl hydrolase family 2, T | 95.81 | |
| 3kl0_A | 401 | Glucuronoxylanase XYNC; alpha beta barrel, (beta/a | 95.62 | |
| 1jz7_A | 1023 | Lactase, beta-galactosidase, LACZ; TIM barrel (alp | 95.58 | |
| 2je8_A | 848 | Beta-mannosidase; glycoside hydrolase, hydrolase; | 95.47 | |
| 2vzs_A | 1032 | CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, | 95.37 | |
| 3oba_A | 1032 | Beta-galactosidase; TIM barrel, tetramer, GH2, gly | 95.28 | |
| 4dde_A | 480 | 6-phospho-beta-glucosidase; structural genomics, P | 95.12 | |
| 2w5f_A | 540 | Endo-1,4-beta-xylanase Y; cellulosome, glycosidase | 95.0 | |
| 3clw_A | 507 | Conserved exported protein; structural genomics, u | 94.37 | |
| 4a3y_A | 540 | Raucaffricine-O-beta-D-glucosidase; hydrolase, alk | 94.24 | |
| 2wnw_A | 447 | Activated by transcription factor SSRB; hydrolase, | 93.18 | |
| 3og2_A | 1003 | Beta-galactosidase; TIM barrel domain, glycoside h | 91.55 | |
| 1tg7_A | 971 | Beta-galactosidase; TIM barrel domain, glycoside h | 90.41 | |
| 3k1d_A | 722 | 1,4-alpha-glucan-branching enzyme; mycobacterium t | 89.97 | |
| 4ha4_A | 489 | Beta-galactosidase; TIM barrel, beta-glycosidase, | 89.84 | |
| 1uwi_A | 489 | Beta-galactosidase; hydrolase, beta-glycosidase, g | 89.4 | |
| 3ngf_A | 269 | AP endonuclease, family 2; structural genomics, se | 89.05 | |
| 3zr5_A | 656 | Galactocerebrosidase; hydrolase, GALC, glycosyl hy | 88.89 | |
| 3zss_A | 695 | Putative glucanohydrolase PEP1A; alpha-glucan bios | 87.1 | |
| 2yfo_A | 720 | Alpha-galactosidase-sucrose kinase agask; hydrolas | 84.85 | |
| 1ea9_C | 583 | Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A | 84.42 | |
| 1gcy_A | 527 | Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b | 83.95 | |
| 1ua7_A | 422 | Alpha-amylase; beta-alpha-barrels, acarbose, greek | 83.33 | |
| 4ad1_A | 380 | Glycosyl hydrolase family 71; glycoside hydrolase | 82.16 | |
| 2zxd_A | 455 | Alpha-L-fucosidase, putative; TIM barrel, hydrolas | 82.03 | |
| 3edf_A | 601 | FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c | 82.01 | |
| 3cqj_A | 295 | L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barre | 81.11 | |
| 3mi6_A | 745 | Alpha-galactosidase; NESG, structural genomics, PS | 80.64 | |
| 1qtw_A | 285 | Endonuclease IV; DNA repair enzyme, TIM barrel, tr | 80.58 | |
| 4gqr_A | 496 | Pancreatic alpha-amylase; glycosyl hydrolase, diab | 80.56 |
| >4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-136 Score=1153.53 Aligned_cols=534 Identities=28% Similarity=0.520 Sum_probs=439.3
Q ss_pred cceecccCCCCcccHHHHHHHHHHCCCCEEEEcccCCccCCcCCeeeeccchhHHHHHHHHHHcCcEEEeecCceecccc
Q 005690 2 GSFYFSFFFIWLQMWPDLIQKAKDGGLDVIQTYVFWNGHEPTQGNYYFQDRYDLVRFIKLVQQAGLYVHLRIGPYVCAEW 81 (683)
Q Consensus 2 ~e~~~~~~r~~~~~W~d~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~dF~G~~dl~~fl~~a~~~GL~VilrpGPyi~aEw 81 (683)
||+| |+|.+|++|+|+|+||||+|+|+|++|||||+|||+||+|||+|++||++||++|+++||+|||||||||||||
T Consensus 22 G~~H--y~r~p~~~W~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~dL~~fl~~a~~~Gl~VilrpGPYi~aEw 99 (595)
T 4e8d_A 22 GAIH--YFRVPPEDWYHSLYNLKALGFNTVETYVAWNLHEPCEGEFHFEGDLDLEKFLQIAQDLGLYAIVRPSPFICAEW 99 (595)
T ss_dssp EEEC--GGGSCGGGHHHHHHHHHHTTCCEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHHHTTCEEEEECCSCCCTTB
T ss_pred EEeC--hhhCCHHHHHHHHHHHHHcCCCEEEEeccHHHcCCCCCeecccchhhHHHHHHHHHHcCCEEEEecCCceeccc
Confidence 7888 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCeEeecCChhhHHHHHHHHHHHHHHHhhcccccccCCceEeccccccCCCccccCCCCcHHHHHHHH
Q 005690 82 NYGGFPVWLKYVPGIEFRTDNGPFKAAMHKFTEKIVSMMKAEKLFQTQGGPIILSQIENEFGPVEWDIGAPGKAYAKWAA 161 (683)
Q Consensus 82 ~~GG~P~WL~~~p~~~~Rt~~~~y~~~~~~~~~~l~~~l~~~~~~~~~gGpII~~QiENEyg~~~~~~~~~~~~y~~~l~ 161 (683)
++||+|+||+++| +++|++||.|++++++|+++|+++++ ++++++||||||+|||||||+++ |+++||+||+
T Consensus 100 ~~GG~P~WL~~~p-~~lRt~~p~y~~~~~~~~~~l~~~l~--~~~~~~GgpVI~~QvENEyG~~~-----~~~~Y~~~l~ 171 (595)
T 4e8d_A 100 EFGGLPAWLLTKN-MRIRSSDPAYIEAVGRYYDQLLPRLV--PRLLDNGGNILMMQVENEYGSYG-----EDKAYLRAIR 171 (595)
T ss_dssp GGGGCCGGGGGSS-SCSSSSCHHHHHHHHHHHHHHGGGTG--GGBGGGTSCEEEEESSSSGGGTC-----CCHHHHHHHH
T ss_pred CCCcCChhhccCC-ceeccCCHHHHHHHHHHHHHHHHHHH--HHhcccCCCEEEEEccccccccC-----CcHHHHHHHH
Confidence 9999999999998 88999999999999999999999999 88999999999999999999872 6999999999
Q ss_pred HHHhhCCCCcceeeecCCC-------CC--CccccCCC-Cccc-ccc------CCCCCCC-CceeeeccccccCccCCCC
Q 005690 162 QMAVGLNTGVPWVMCKQDD-------AP--DPVINTCN-GFYC-EKF------VPNQNYK-PKMWTEAWTGWFTEFGSAV 223 (683)
Q Consensus 162 ~~~~~~g~~vp~~~~~~~~-------~~--~~~~~t~~-g~~~-~~~------~~~~p~~-P~~~~E~~~Gwf~~wG~~~ 223 (683)
++++++|++|||+||++.. +. +++++||| |.+| +.| .+.+|++ |+|++|||+||||+||+++
T Consensus 172 ~~~~~~Gi~vpl~t~d~~~~~~~~~G~~~~~~~~~t~nfg~~~~~~~~~~~~~~~~~p~~~P~~~~Ef~~Gwfd~WG~~~ 251 (595)
T 4e8d_A 172 QLMEECGVTCPLFTSDGPWRATLKAGTLIEEDLFVTGNFGSKAPYNFSQMQEFFDEHGKKWPLMCMEFWDGWFNRWKEPI 251 (595)
T ss_dssp HHHHHTTCCSCEEEEECSSHHHHHHHCCGGGTCEEEEEESSCHHHHHHHHHHHHHHTTCCCCCEEEEEECSCCCBTTSCC
T ss_pred HHHHHcCCcEEEEEccCcchhcccCCccCCCCeEEEeeCCCchhHhHHHHHHhhhcCCCCCCeEEEeeccccccccCCCC
Confidence 9999999999999999853 22 56889998 6667 443 2445888 9999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCeeeeeeeeccCCCCCCCCCC--------CcccccCCCCCcCccCCCCchhHHHHHHHHHH
Q 005690 224 PTRPAEDLVFSVARFIQSGGSFINYYMYHGGTNFGRTSGG--------FVATSYDYDAPIDEYGLLNEPKWGHLRDLHKA 295 (683)
Q Consensus 224 ~~~~~~~~~~~~~~~l~~g~s~~n~YM~hGGTNfG~~~g~--------~~~tSYDy~Apl~E~G~~~t~Ky~~lr~l~~~ 295 (683)
++|++++++..++++|++| + +||||||||||||+|+|+ .++|||||||||+|+|++ ||||.+||+++..
T Consensus 252 ~~~~~~~~~~~~~~~l~~g-s-~N~YM~hGGTNfG~~~Ga~~~~~~~~p~~TSYDYdApi~E~G~~-t~Ky~~lr~~i~~ 328 (595)
T 4e8d_A 252 ITRDPKELADAVREVLEQG-S-INLYMFHGGTNFGFMNGCSARGTLDLPQVTSYDYDALLDEEGNP-TAKYLAVKKMMAT 328 (595)
T ss_dssp CCCCHHHHHHHHHHHHHHS-E-EEEEEEECCBCCTTCBCEEEETTEEEEBCSBCCTTCSBCTTSCB-CHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcC-C-ceEEecccccCcccccCCCCCCCCCCCCCCccCCCCccCcCCCc-cHHHHHHHHHHHH
Confidence 9999999999999999999 5 899999999999999986 247999999999999999 6999999998764
Q ss_pred HHhhcCCCCCCCCccccCCCCcceeEeccCCCccceeecccCCccceeEeecCccccCCCcceeecCCcccccccccccc
Q 005690 296 IKLCEPALVSVDPTVKSLGKNQEAHVFNSKSGKCAAFLANYDTTFSAKVSFGNAQYDLPPWSISVLPDCKTAVFNTARVG 375 (683)
Q Consensus 296 ~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~fl~n~~~~~~~~v~~~~~~~~~~~~~v~il~~~~~~~~~t~~v~ 375 (683)
+. .+ ++..+|...+ +..| .+|.+.. .++ |+++++..
T Consensus 329 ~~--~~-~p~~~P~~~~------~~~~-------------------~~v~l~~--------~~~--------L~~~l~~l 364 (595)
T 4e8d_A 329 HF--SE-YPQLEPLYKE------SMEL-------------------DAIPLVE--------KVS--------LFETLDSL 364 (595)
T ss_dssp HC--TT-SCCCCCCCCC------BCCE-------------------EEEEEEE--------EEE--------HHHHHHHH
T ss_pred hC--CC-CCCCCCCCCc------cccc-------------------ceEEecc--------ccc--------HHHhhhhc
Confidence 41 11 1111122111 1111 1111111 111 22222110
Q ss_pred cccccceeeecccccccccccccccCCCCCCCcccCchhhhhcccCCCcceEEEEEEecCCCCcccccCCCCCceEecCc
Q 005690 376 VQSSQKKFVPVINAFSWQSYIEETASSTDDNTFTKDGLWEQVYLTADASDYLWYMTDVNIDSNEGFLKNGQDPLLTIWSA 455 (683)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~Eql~~t~d~~Gyl~Yrt~i~~~~~~~~~~~g~~~~L~i~~~ 455 (683)
.+|..+ . .|+ +||+|+| .+||+||||++..... ...|++.++
T Consensus 365 -------~~~~~s---------------~-~P~----~mE~lgq---~~GyvlY~t~i~~~~~--------~~~L~~~~~ 406 (595)
T 4e8d_A 365 -------SSPVES---------------L-YPQ----KMEELGQ---SYGYLLYRTETNWDAE--------EERLRIIDG 406 (595)
T ss_dssp -------CCCEEE---------------S-SCC----BTGGGTC---CSSEEEEEEEEECSSS--------SEEEEEEEE
T ss_pred -------CCcccc---------------C-CCC----CHHHcCC---CcCeEEEEeccCCCCC--------CceeecCCC
Confidence 011111 0 133 3999976 9999999999975322 247999999
Q ss_pred ceEEEEEECCEEEEEEEcccCCCeeEEeeeeecCCCc-cEEEEEEecCCcccccccc--cccccceeccEEEccccCcce
Q 005690 456 GHALQVFINGQLSGTVYGSLENPKLTFSKNVKLRPGV-NKISLLSTSVGLPNVGTHF--EKWNAGVLGPVTLKGLNEGTR 532 (683)
Q Consensus 456 ~d~a~vfvng~~~G~~~~~~~~~~~~~~~~~~l~~g~-~~L~ILven~Gr~NyG~~~--~~~~kGI~g~V~l~g~~~g~~ 532 (683)
+|||+|||||+++|++++.....++.+ +...+. ++|+||||||||+|||+.| .+++|||+|+|+|++.
T Consensus 407 ~Dra~Vfvdg~~~g~l~r~~~~~~i~~----~~~~~~~~~L~ILVEN~GRvNyG~~~~~~~~~KGi~g~V~l~~~----- 477 (595)
T 4e8d_A 407 RDRAQLYVDGQWVKTQYQTEIGEDIFY----QGKKKGLSRLDILIENMGRVNYGHKFLADTQRKGIRTGVCKDLH----- 477 (595)
T ss_dssp ESEEEEEETTEEEEEEEGGGTTSCEEE----CCCSSSEEEEEEEEECCCCCCSGGGTTCGGGSCEEEEEEEETTE-----
T ss_pred ceEEEEEECCEEEEEEEcccCcceEEe----ecCCCCCCEEEEEEEcCCCcccCcccCcCCCCCCCCCCeEECCE-----
Confidence 999999999999999998654344433 223344 7999999999999999988 5799999999999987
Q ss_pred ecccCeeEEEecCccccccccccCCCCCccccccCccCCCCCceEEEEEEECCCCCCCeEEecCCCceEEEEEcCccccc
Q 005690 533 DISKQKWTYKIGLKGEALSLHTVSGSSSVEWAQGASLAQKQPMTWYKTTFNVPPGNDPLALDMGAMGKGMVWINGQSIGR 612 (683)
Q Consensus 533 ~L~~~~W~~~~~l~ge~~~~~~~~~~~~~~w~~~~~~~~~~~~~fYk~~F~~~~~~d~~~Ld~~g~gKG~vwVNG~nlGR 612 (683)
.|++|+ .|+++|+.- ..++|..... ..+|+||+++|++++..|+ ||||+||+||+|||||+||||
T Consensus 478 ~l~~W~-~~~L~l~~~----------~~~~~~~~~~---~~~P~fy~g~f~~~~~~DT-fLd~~gwgKG~v~VNG~nLGR 542 (595)
T 4e8d_A 478 FLLNWK-HYPLPLDNP----------EKIDFSKGWT---QGQPAFYAYDFTVEEPKDT-YLDLSEFGKGVAFVNGQNLGR 542 (595)
T ss_dssp ECCCEE-EEEECCCCG----------GGCCTTSCCC---TTSCEEEEEEEEESSCCBE-EEECTTCCEEEEEETTEEEEE
T ss_pred EcCCcE-EEeeccchh----------hhcccccccC---CCCCeEEEEEEEcCCCCCE-EEeCCCCceEEEEECCeeeec
Confidence 677544 488988641 1223332211 2457999999999877774 999999999999999999999
Q ss_pred cccCCCCCCCCCCCCCCCcccccccccCCCCCeeeEeecCcccccCCCcEEEEEEecCCCCccEEEEEE
Q 005690 613 HWPGYIGNGNCGGCNYAGTYTEKKCRTYCGKPSQRWYHVPRSWLKPSGNLLVVFEEWGGEPHWISLLKR 681 (683)
Q Consensus 613 YW~~~~~~G~~~~~~~~g~~~~~~~~~~~g~PqqtlYhVP~~~Lk~g~N~IvvfEe~g~~p~~i~l~~~ 681 (683)
||+ +| |||||| ||++|||+|+|+|||||+++....+|+|+++
T Consensus 543 YW~----~G----------------------PQ~tLY-vP~~~Lk~G~NeIvvfEl~~~~~~~i~~~~~ 584 (595)
T 4e8d_A 543 FWN----VG----------------------PTLSLY-IPHSYLKEGANRIIIFETEGQYKEEIHLTRK 584 (595)
T ss_dssp EET----TC----------------------SBCEEE-ECGGGSCSEEEEEEEEESSSCCCSEEEEESS
T ss_pred ccC----CC----------------------CeEEEE-ecHHHhCcCCceEEEEEecCCCCceEEeecc
Confidence 996 79 999999 9999999999999999999877788998764
|
| >3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* | Back alignment and structure |
|---|
| >3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
| >1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* | Back alignment and structure |
|---|
| >3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* | Back alignment and structure |
|---|
| >3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} | Back alignment and structure |
|---|
| >1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A | Back alignment and structure |
|---|
| >3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* | Back alignment and structure |
|---|
| >1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* | Back alignment and structure |
|---|
| >3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* | Back alignment and structure |
|---|
| >2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* | Back alignment and structure |
|---|
| >1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 | Back alignment and structure |
|---|
| >1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* | Back alignment and structure |
|---|
| >1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* | Back alignment and structure |
|---|
| >3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} | Back alignment and structure |
|---|
| >4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* | Back alignment and structure |
|---|
| >3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} | Back alignment and structure |
|---|
| >3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* | Back alignment and structure |
|---|
| >1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} | Back alignment and structure |
|---|
| >1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* | Back alignment and structure |
|---|
| >3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* | Back alignment and structure |
|---|
| >1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A | Back alignment and structure |
|---|
| >2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} | Back alignment and structure |
|---|
| >1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A | Back alignment and structure |
|---|
| >1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A | Back alignment and structure |
|---|
| >2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* | Back alignment and structure |
|---|
| >3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A | Back alignment and structure |
|---|
| >1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A | Back alignment and structure |
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| >1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A | Back alignment and structure |
|---|
| >1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A | Back alignment and structure |
|---|
| >2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* | Back alignment and structure |
|---|
| >1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* | Back alignment and structure |
|---|
| >2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A | Back alignment and structure |
|---|
| >3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* | Back alignment and structure |
|---|
| >1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* | Back alignment and structure |
|---|
| >1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* | Back alignment and structure |
|---|
| >4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} | Back alignment and structure |
|---|
| >1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A | Back alignment and structure |
|---|
| >3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} | Back alignment and structure |
|---|
| >2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* | Back alignment and structure |
|---|
| >1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4 | Back alignment and structure |
|---|
| >3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} | Back alignment and structure |
|---|
| >1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A | Back alignment and structure |
|---|
| >3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* | Back alignment and structure |
|---|
| >1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A | Back alignment and structure |
|---|
| >3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A | Back alignment and structure |
|---|
| >3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A | Back alignment and structure |
|---|
| >3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* | Back alignment and structure |
|---|
| >1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* | Back alignment and structure |
|---|
| >1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* | Back alignment and structure |
|---|
| >1qox_A Beta-glucosidase; hydrolase, cellulose degradation; 2.7A {Bacillus circulans} SCOP: c.1.8.4 | Back alignment and structure |
|---|
| >2o9p_A Beta-glucosidase B; family 1 glycoside hydrolase; 2.10A {Paenibacillus polymyxa} PDB: 2o9t_A* 2z1s_A* 2jie_A* 2o9r_A* | Back alignment and structure |
|---|
| >2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase, polysaccharide degradation, transition state mimic, carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A* 1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A* 2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A* 2j7f_A* 2j7g_A* 2j7h_A* ... | Back alignment and structure |
|---|
| >2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A* | Back alignment and structure |
|---|
| >1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... | Back alignment and structure |
|---|
| >3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A | Back alignment and structure |
|---|
| >3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} | Back alignment and structure |
|---|
| >7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A | Back alignment and structure |
|---|
| >3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} | Back alignment and structure |
|---|
| >1wcg_A Thioglucosidase, myrosinase; aphid, beta-glucosidase, insect, beta-barrel, hydrolase, glycosidase; 1.10A {Brevicoryne brassicae} SCOP: c.1.8.4 | Back alignment and structure |
|---|
| >2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A | Back alignment and structure |
|---|
| >3ahx_A Beta-glucosidase A; cellulases, glycosyl hydrolase, manganese enhancement, hydro; HET: 7PE; 1.90A {Clostridium cellulovorans} | Back alignment and structure |
|---|
| >2e9l_A Cytosolic beta-glucosidase; novel cytosolic neutral beta-glycosylceramidase, hydrolase; HET: BGC PLM OLA; 1.60A {Homo sapiens} PDB: 2e9m_A* 2zox_A* 2jfe_X* | Back alignment and structure |
|---|
| >4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} | Back alignment and structure |
|---|
| >3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A | Back alignment and structure |
|---|
| >2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} | Back alignment and structure |
|---|
| >1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A | Back alignment and structure |
|---|
| >3apg_A Beta-glucosidase; TIM barrel, hydrolase, sugar binding, hydrolysis; 2.35A {Pyrococcus furiosus} | Back alignment and structure |
|---|
| >1v08_A Beta-glucosidase; glycoside hydrolase, dimboa-glucoside, inhibitor, PEST defense, family GH1, hydrolase, chloroplast, transit peptide, 3D-structure; HET: NTZ; 1.9A {Zea mays} SCOP: c.1.8.4 PDB: 1e4l_A* 1e4n_A* 1e56_A* 1e55_A* 1e1e_A 1e1f_A* 1h49_A* 1hxj_A | Back alignment and structure |
|---|
| >1qvb_A Beta-glycosidase; TIM-barrel, thermostable, hydrolase; 2.40A {Thermosphaera aggregans} SCOP: c.1.8.4 | Back alignment and structure |
|---|
| >3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A* | Back alignment and structure |
|---|
| >1e4m_M Myrosinase MA1; hydrolase, family 1 glycosyl hydrolase, glucosinolate, TIM B; HET: NAG FUC BMA MAN; 1.2A {Sinapis alba} SCOP: c.1.8.4 PDB: 1e6q_M* 1e6s_M* 1e6x_M* 1e70_M* 1e71_M* 1e72_M* 1e73_M* 1w9b_M* 1w9d_M* 2wxd_M* 1dwa_M* 1dwf_M* 1dwg_M* 1dwh_M* 1dwi_M* 1dwj_M* 1myr_A* | Back alignment and structure |
|---|
| >1e4i_A Beta-glucosidase; hydrolase, family 1 glycosyl hydrolase, covalent enzyme-GLYC intermediate, alpha/beta barrel; HET: G2F NFG; 2.00A {Bacillus polymyxa} SCOP: c.1.8.4 PDB: 1tr1_A 1bgg_A* 1bga_A 1uyq_A* | Back alignment and structure |
|---|
| >2dga_A Beta-glucosidase; alpha/beta barrel, hydrolase; 1.80A {Triticum aestivum} PDB: 3aiq_A* 3air_A* 3ais_A* 3aiu_A 3aiv_A* 3aiw_A* | Back alignment and structure |
|---|
| >1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A | Back alignment and structure |
|---|
| >3ahy_A Beta-glucosidase; cellulases, glycosyl hydrolase, manganese enhancement, hydro; 1.63A {Trichoderma reesei} | Back alignment and structure |
|---|
| >2e3z_A Beta-glucosidase; TIM barrel, glycoside hydrolase family 1, CLAN GH-A, structural genomics, NPPSFA; 1.50A {Phanerochaete chrysosporium} PDB: 2e40_A* | Back alignment and structure |
|---|
| >2xhy_A BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, glycosidase; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
| >1v02_A Dhurrinase, dhurrinase-1; beta-glucosidase, dhurrin hydrolysis, PEST defense, family GH1, hydrolase; 1.9A {Sorghum bicolor} SCOP: c.1.8.4 PDB: 1v02_E 1v03_A* | Back alignment and structure |
|---|
| >1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A* | Back alignment and structure |
|---|
| >1cbg_A Cyanogenic beta-glucosidase; hydrolase (O-glycosyl); 2.15A {Trifolium repens} SCOP: c.1.8.4 | Back alignment and structure |
|---|
| >2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* | Back alignment and structure |
|---|
| >1pbg_A PGAL, 6-phospho-beta-D-galactosidase; hydrolase (glycosyl hydrolase); 2.30A {Lactococcus lactis} SCOP: c.1.8.4 PDB: 3pbg_A 2pbg_A 4pbg_A* | Back alignment and structure |
|---|
| >1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1 | Back alignment and structure |
|---|
| >2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A* | Back alignment and structure |
|---|
| >2jf7_A Strictosidine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.48A {Rauvolfia serpentina} PDB: 2jf6_A | Back alignment and structure |
|---|
| >1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* | Back alignment and structure |
|---|
| >1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 | Back alignment and structure |
|---|
| >1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* | Back alignment and structure |
|---|
| >3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A | Back alignment and structure |
|---|
| >4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens} | Back alignment and structure |
|---|
| >1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A | Back alignment and structure |
|---|
| >1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* | Back alignment and structure |
|---|
| >1gnx_A Beta-glucosidase; hydrolase, glycosyltransferase, family 1 of glycosyl hydrolase; HET: SUC; 1.68A {Streptomyces SP} SCOP: c.1.8.4 PDB: 1gon_A | Back alignment and structure |
|---|
| >3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum} | Back alignment and structure |
|---|
| >2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A* | Back alignment and structure |
|---|
| >4b3l_A Beta-glucosidase; hydrolase, glycosidase, carbohydrate-active enzyme; 2.51A {Streptococcus pyogenes} PDB: 4b3k_A | Back alignment and structure |
|---|
| >3gnp_A OS03G0212800 protein; beta-alpha barrel, glycosidase, hydrolase; HET: SOG; 1.80A {Oryza sativa subsp} PDB: 3gno_A* 3gnr_A* | Back alignment and structure |
|---|
| >2nt0_A Glucosylceramidase; cerezyme, glucocerebrosidase, glucosylceramide, hydrolysis, disease, hydrolase; HET: NAG; 1.79A {Homo sapiens} SCOP: b.71.1.2 c.1.8.3 PDB: 1y7v_A* 2f61_A* 2j25_A* 2nsx_A* 1ogs_A* 2nt1_A* 3gxd_A* 3gxf_A* 3gxi_A* 3gxm_A* 3rik_A* 3ril_A* 2v3f_A* 2v3e_A* 2v3d_A* 2vt0_A* 2wcg_A* 2xwd_A* 2xwe_A* 2wkl_A* ... | Back alignment and structure |
|---|
| >3f5l_A Beta-glucosidase; beta-alpha-barrels, glycosidase, hydrolase; HET: LB2 MES; 1.37A {Oryza sativa japonica group} PDB: 3aht_A* 3ahv_A* 3f5i_A* 3f5j_A* 3f5k_A* 3f4v_A* 2rgm_A* 2rgl_A* 3scr_A* 3scs_A* 3scp_A* 3scq_A* 3scu_A* 3scn_A* 3sco_A* 3sct_A* 3scv_A* 3scw_A* | Back alignment and structure |
|---|
| >3gyc_A Putative glycoside hydrolase; YP_001304622.1, structural GEN joint center for structural genomics, JCSG; HET: MSE; 1.85A {Parabacteroides distasonis atcc 8503} | Back alignment and structure |
|---|
| >4hz8_A Beta-glucosidase; BGLB,BGL, hydrolase, glycosid barrel, carbohydrate/sugar binding; HET: BGC; 1.14A {Uncultured bacterium} PDB: 4hz7_A* 4hz6_A* 3fj0_A* 3cmj_A 3fiz_A* 3fiy_A* | Back alignment and structure |
|---|
| >3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} | Back alignment and structure |
|---|
| >3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A | Back alignment and structure |
|---|
| >3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} | Back alignment and structure |
|---|
| >4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* | Back alignment and structure |
|---|
| >3ro8_A Endo-1,4-beta-xylanase; glycosyl hydrolase family 10, GH10, (beta/alpha)8 fold, XYLA hydrolase; 1.34A {Paenibacillus SP} PDB: 3rdk_A 4e4p_A | Back alignment and structure |
|---|
| >3kzs_A Glycosyl hydrolase family 5; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 2.10A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} | Back alignment and structure |
|---|
| >3ta9_A Glycoside hydrolase family 1; TIM barrel, glucosidase; 3.00A {Halothermothrix orenii} | Back alignment and structure |
|---|
| >3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A | Back alignment and structure |
|---|
| >4atd_A Raucaffricine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.10A {Rauvolfia serpentina} PDB: 4a3y_A 3u5u_A 3u57_A 3u5y_A* | Back alignment and structure |
|---|
| >3vii_A Beta-glucosidase; cellulases, glycosyl hydrolase, hydrolase; HET: BTB; 0.97A {Neotermes koshunensis} PDB: 3ahz_A* 3vif_A* 3vih_A 3vig_A* 3vim_A* 3ai0_A* 3vin_A* 3vio_A* 3vip_A* 3vij_A* 3vik_A* 3vil_A* | Back alignment and structure |
|---|
| >2y24_A Xylanase; hydrolase, GH5 family, aldotetraouronic acid; HET: XYP GCV PG4 PGE; 1.39A {Erwinia chrysanthemi} PDB: 1nof_A* | Back alignment and structure |
|---|
| >3ptm_A Beta-glucosidase OS4BGlu12; beta-alpha barrel, glycosidase, hydrolase; HET: G2F; 2.40A {Oryza sativa} PDB: 3ptk_A* 3ptq_A* | Back alignment and structure |
|---|
| >3qom_A 6-phospho-beta-glucosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycoside hydrolase, hydrolase; HET: BGC; 1.50A {Lactobacillus plantarum} SCOP: c.1.8.0 PDB: 4gze_A | Back alignment and structure |
|---|
| >1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 | Back alignment and structure |
|---|
| >3kl0_A Glucuronoxylanase XYNC; alpha beta barrel, (beta/alpha)8 barrel (beta/alpha)8 + beta motif family, hydrolase; HET: TAR HIS; 1.64A {Bacillus subtilis} PDB: 3gtn_A* 3kl3_A* 3kl5_A* | Back alignment and structure |
|---|
| >1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... | Back alignment and structure |
|---|
| >2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A* | Back alignment and structure |
|---|
| >2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A* | Back alignment and structure |
|---|
| >3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A | Back alignment and structure |
|---|
| >2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A* | Back alignment and structure |
|---|
| >3clw_A Conserved exported protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Bacteroides fragilis} | Back alignment and structure |
|---|
| >4a3y_A Raucaffricine-O-beta-D-glucosidase; hydrolase, alkaloid; 2.15A {Rauvolfia serpentina} PDB: 3u5u_A 3u57_A 3u5y_A* | Back alignment and structure |
|---|
| >2wnw_A Activated by transcription factor SSRB; hydrolase, salmonella typhimurium, O-glycosyl hydrolase family 30; 2.00A {Salmonella enterica subsp} | Back alignment and structure |
|---|
| >3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* | Back alignment and structure |
|---|
| >1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* | Back alignment and structure |
|---|
| >3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >4ha4_A Beta-galactosidase; TIM barrel, beta-glycosidase, hydrolase; HET: GOL PG6; 1.37A {Acidilobus saccharovorans} PDB: 4ha3_A* 1uws_A* 1uwr_A* 1uwq_A* 1uwt_A* 1uwu_A* 2ceq_A* 2cer_A* 4eam_A 4ean_A | Back alignment and structure |
|---|
| >1uwi_A Beta-galactosidase; hydrolase, beta-glycosidase, glycosidase; 2.55A {Sulfolobus solfataricus} SCOP: c.1.8.4 PDB: 1gow_A | Back alignment and structure |
|---|
| >3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0 | Back alignment and structure |
|---|
| >3zr5_A Galactocerebrosidase; hydrolase, GALC, glycosyl hydrolase, krabbe disease, TIM BAR lectin domain; HET: NAG; 2.10A {Mus musculus} PDB: 3zr6_A* | Back alignment and structure |
|---|
| >3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* | Back alignment and structure |
|---|
| >2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* | Back alignment and structure |
|---|
| >1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
| >1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* | Back alignment and structure |
|---|
| >1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A | Back alignment and structure |
|---|
| >4ad1_A Glycosyl hydrolase family 71; glycoside hydrolase GH99, CAZY, enzyme-carbohydra interaction, mannose glycosidase inhibition; 1.90A {Bacteroides xylanisolvens} PDB: 4ad2_A* 4ad3_A* 4ad4_A* 4ad5_A* | Back alignment and structure |
|---|
| >2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A* | Back alignment and structure |
|---|
| >3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A | Back alignment and structure |
|---|
| >3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A | Back alignment and structure |
|---|
| >3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} | Back alignment and structure |
|---|
| >1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A* | Back alignment and structure |
|---|
| >4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ... | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 683 | ||||
| d1tg7a5 | 354 | c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-ter | 3e-86 | |
| d1kwga2 | 393 | c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus t | 5e-11 | |
| d1hjsa_ | 332 | c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heter | 0.001 |
| >d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} Length = 354 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Glycosyl hydrolases family 35 catalytic domain domain: Beta-galactosidase LacA, N-terminal domain species: Penicillium sp. [TaxId: 5081]
Score = 272 bits (697), Expect = 3e-86
Identities = 83/322 (25%), Positives = 125/322 (38%), Gaps = 38/322 (11%)
Query: 12 WLQMWPDLIQKAKDGGLDVIQTYVFWNGHEPTQGNYYFQDRYDLVRFIKLVQQAGLYVHL 71
++ D+ +K K G + + YV W E G+Y + +DL F ++AG+Y+
Sbjct: 34 VASLYIDIFEKVKALGFNCVSFYVDWALLEGNPGHYSAEGIFDLQPFFDAAKEAGIYLLA 93
Query: 72 RIGPYVCAEWNYGGFPVWLKYVPGIEFRTDNGPFKAAMHKFTEKIVSMMKAEKLFQTQGG 131
R GPY+ AE + GGFP WL+ V GI RT + + A + I + + ++ T GG
Sbjct: 94 RPGPYINAEVSGGGFPGWLQRVDGI-LRTSDEAYLKATDNYASNIAATIAKAQI--TNGG 150
Query: 132 PIILSQIENEFG-PVEWDIGAPGKAYAKWAAQMAVGLNTGVPWVMC----KQDDAPDPVI 186
PIIL Q ENE+ G P +Y ++ A VP++ +AP
Sbjct: 151 PIILYQPENEYSGACCGYNGFPDGSYMQYIEDHARDAGIVVPFISNDAWAAGHNAPGTGA 210
Query: 187 NTCNGFYC-------------------------EKFVPNQNYKPKMWTEAWTGWFTEFGS 221
+ + P E G F +G
Sbjct: 211 GAVDIYGHDSYPLGFDCANPSTWPSGNLPTYFHTSHEQQSPSTPYSLVEFQGGAFDPWGG 270
Query: 222 AVPTRPAEDLVFSVARFIQ-----SGGSFINYYMYHGGTNFGRTSGGFVATSYDYDAPID 276
+ A L R G +F+N YM GGTN+G TSYDY + I
Sbjct: 271 VGFAKCAALLNHEFERVFYKNDFSFGVAFLNLYMIFGGTNWGNLGHPGGYTSYDYGSAIS 330
Query: 277 EYGLLNEPKWGHLRDLHKAIKL 298
E + K+ L+ L K+
Sbjct: 331 ESRNITREKYSELKLLGNFAKV 352
|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Length = 393 | Back information, alignment and structure |
|---|
| >d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} Length = 332 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 683 | |||
| d1tg7a5 | 354 | Beta-galactosidase LacA, N-terminal domain {Penici | 100.0 | |
| d1kwga2 | 393 | A4 beta-galactosidase {Thermus thermophilus [TaxId | 99.62 | |
| d1tg7a3 | 163 | Beta-galactosidase LacA, domains 4 and 5 {Penicill | 99.59 | |
| d1rh9a1 | 370 | Beta-mannanase {Tomato (Lycopersicon esculentum) [ | 99.25 | |
| d2vzsa5 | 339 | Exochitosanase CsxA {Amycolatopsis orientalis [Tax | 99.22 | |
| d2pb1a1 | 394 | Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) | 98.9 | |
| d1uuqa_ | 410 | Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | 98.88 | |
| d1tg7a2 | 182 | Beta-galactosidase LacA, domains 4 and 5 {Penicill | 98.79 | |
| d1vema2 | 417 | Bacterial beta-amylase {Bacillus cereus [TaxId: 13 | 98.78 | |
| d1ceoa_ | 340 | Endoglucanase CelC {Clostridium thermocellum [TaxI | 98.76 | |
| d1bhga3 | 304 | beta-Glucuronidase, domain 3 {Human (Homo sapiens) | 98.72 | |
| d1qnra_ | 344 | Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | 98.68 | |
| d1h4pa_ | 408 | Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom | 98.59 | |
| d1uhva2 | 346 | Beta-D-xylosidase, catalytic domain {Thermoanaerob | 98.57 | |
| d1jz8a5 | 292 | beta-Galactosidase, domain 3 {Escherichia coli [Ta | 98.51 | |
| d1hjsa_ | 332 | Beta-1,4-galactanase {Thielavia heterothallica, ak | 98.49 | |
| d2c0ha1 | 350 | endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed | 98.42 | |
| d1vjza_ | 325 | Endoglucanase homologue TM1752 {Thermotoga maritim | 98.4 | |
| d1foba_ | 334 | Beta-1,4-galactanase {Fungus (Aspergillus aculeatu | 98.4 | |
| d1bqca_ | 302 | Beta-mannanase {Thermomonospora fusca [TaxId: 2021 | 98.4 | |
| d1wkya2 | 297 | Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 | 98.36 | |
| d1h1na_ | 305 | Endocellulase EngI {Thermoascus aurantiacus [TaxId | 98.34 | |
| d1ur4a_ | 387 | Beta-1,4-galactanase {Bacillus licheniformis [TaxI | 98.27 | |
| d1ecea_ | 358 | Endocellulase E1 {Acidothermus cellulolyticus [Tax | 98.23 | |
| d1vbua1 | 324 | Xylanase {Thermotoga maritima [TaxId: 2336]} | 98.18 | |
| d1fh9a_ | 312 | Xylanase A, catalytic core {Cellulomonas fimi [Tax | 98.08 | |
| d7a3ha_ | 300 | Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId | 97.95 | |
| d1yq2a5 | 297 | beta-Galactosidase, domain 3 {Arthrobacter sp. c2- | 97.87 | |
| d2je8a5 | 348 | Five-domain beta-mannosidase, domain 3 {Bacteroide | 97.82 | |
| d1v0la_ | 302 | Xylanase A, catalytic core {Streptomyces lividans | 97.79 | |
| d1ta3b_ | 301 | Xylanase A, catalytic core {Emericella nidulans (A | 97.73 | |
| d1egza_ | 291 | Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: | 97.72 | |
| d1edga_ | 380 | Endoglucanase CelA {Clostridium cellulolyticum [Ta | 97.69 | |
| d1tvna1 | 293 | Endoglucanase Cel5a {Pseudoalteromonas haloplankti | 97.64 | |
| d1b1ya_ | 500 | beta-Amylase {Barley (Hordeum vulgare) [TaxId: 451 | 97.6 | |
| d1n82a_ | 330 | Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId | 97.57 | |
| d1fa2a_ | 498 | beta-Amylase {Sweet potato (Ipomoea batatas) [TaxI | 97.54 | |
| d1nq6a_ | 302 | Xylanase A, catalytic core {Streptomyces halstedii | 97.53 | |
| d1bhga2 | 204 | beta-Glucuronidase {Human (Homo sapiens) [TaxId: 9 | 97.52 | |
| d1jz8a3 | 207 | beta-Galactosidase {Escherichia coli [TaxId: 562]} | 97.4 | |
| d1xyza_ | 320 | Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 | 97.39 | |
| d1ur1a_ | 350 | Xylanase {Cellvibrio mixtus [TaxId: 39650]} | 97.37 | |
| d1i1wa_ | 303 | Xylanase A, catalytic core {Thermoascus aurantiacu | 97.33 | |
| d1us3a2 | 364 | Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] | 97.3 | |
| d2vzsa4 | 184 | Exochitosanase CsxA {Amycolatopsis orientalis [Tax | 97.29 | |
| d1yq2a3 | 216 | beta-Galactosidase {Arthrobacter sp. c2-2 [TaxId: | 97.28 | |
| d1ug6a_ | 426 | Beta-glucosidase A {Thermus thermophilus [TaxId: 2 | 97.19 | |
| d1wdpa1 | 490 | beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} | 97.15 | |
| d1vffa1 | 423 | Beta-glucosidase A {Archaeon Pyrococcus horikoshii | 97.1 | |
| d2j78a1 | 443 | Beta-glucosidase A {Thermotoga maritima [TaxId: 23 | 97.08 | |
| d2je8a4 | 192 | Beta-mannosidase {Bacteroides thetaiotaomicron [Ta | 97.05 | |
| d1gnxa_ | 464 | Beta-glucosidase A {Streptomyces sp. [TaxId: 1931] | 97.03 | |
| d1e4ia_ | 447 | Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406 | 96.86 | |
| d1r85a_ | 371 | Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: | 96.81 | |
| d1nofa2 | 277 | Glycosyl hydrolase family 5 xylanase, catalytic do | 96.78 | |
| d1qoxa_ | 449 | Beta-glucosidase A {Bacillus circulans, subsp. alk | 96.74 | |
| d1cbga_ | 490 | Plant beta-glucosidase (myrosinase) {Creeping whit | 96.64 | |
| d1g01a_ | 357 | Alkaline cellulase K catalytic domain {Bacillus sp | 96.59 | |
| d1wcga1 | 462 | Thioglucosidase {Cabbage aphid (Brevicoryne brassi | 96.58 | |
| d2vzsa4 | 184 | Exochitosanase CsxA {Amycolatopsis orientalis [Tax | 96.53 | |
| d1v02a_ | 484 | Plant beta-glucosidase (myrosinase) {Sorghum bicol | 96.25 | |
| d1tg7a2 | 182 | Beta-galactosidase LacA, domains 4 and 5 {Penicill | 96.17 | |
| d1pbga_ | 468 | 6-phospho-beta-D-galactosidase, PGAL {Lactococcus | 96.16 | |
| d1e4mm_ | 499 | Plant beta-glucosidase (myrosinase) {White mustard | 96.05 | |
| d1w32a_ | 346 | Xylanase A, catalytic core {Pseudomonas fluorescen | 96.01 | |
| d1yq2a3 | 216 | beta-Galactosidase {Arthrobacter sp. c2-2 [TaxId: | 95.5 | |
| d1bhga2 | 204 | beta-Glucuronidase {Human (Homo sapiens) [TaxId: 9 | 94.96 | |
| d1jz8a3 | 207 | beta-Galactosidase {Escherichia coli [TaxId: 562]} | 94.92 | |
| d1uwsa_ | 489 | beta-Glycosidase {Archaeon Sulfolobus solfataricus | 94.17 | |
| d2je8a4 | 192 | Beta-mannosidase {Bacteroides thetaiotaomicron [Ta | 94.17 | |
| d1qvba_ | 481 | beta-Glycosidase {Archaeon Thermosphaera aggregans | 93.09 | |
| d1zy9a2 | 348 | Alpha-galactosidase GalA catalytic domain {Thermot | 91.69 | |
| d1ud2a2 | 390 | Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta | 91.54 | |
| d2d3na2 | 394 | Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: | 90.56 | |
| d1gcya2 | 357 | G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase | 90.52 | |
| d1mxga2 | 361 | Bacterial alpha-amylase {Archaeon Pyrococcus woese | 90.28 | |
| d1qhoa4 | 407 | Cyclodextrin glycosyltransferase {Bacillus stearot | 90.05 | |
| d1hvxa2 | 393 | Bacterial alpha-amylase {Bacillus stearothermophil | 89.95 | |
| d1ua7a2 | 344 | Bacterial alpha-amylase {Bacillus subtilis [TaxId: | 88.73 | |
| d1ht6a2 | 347 | Plant alpha-amylase {Barley (Hordeum vulgare), AMY | 88.11 | |
| d1bf2a3 | 475 | Isoamylase, central domain {Pseudomonas amyloderam | 87.77 | |
| d1m53a2 | 478 | Isomaltulose synthase PalI {Klebsiella sp., lx3 [T | 87.57 | |
| d2guya2 | 381 | Fungal alpha-amylases {Aspergillus oryzae, Taka-am | 86.12 | |
| d1uoka2 | 479 | Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 | 85.98 | |
| d1h3ga3 | 422 | Cyclomaltodextrinase, central domain {Flavobacteri | 85.78 | |
| d1wzaa2 | 409 | Bacterial alpha-amylase {Halothermothrix orenii [T | 85.14 | |
| d2aaaa2 | 381 | Fungal alpha-amylases {Aspergillus niger, acid amy | 85.12 | |
| d1wzla3 | 382 | Maltogenic amylase, central domain {Thermoactinomy | 84.97 | |
| d1m7xa3 | 396 | 1,4-alpha-glucan branching enzyme, central domain | 84.89 | |
| d1gjwa2 | 572 | Maltosyltransferase {Thermotoga maritima [TaxId: 2 | 84.71 | |
| d1g94a2 | 354 | Bacterial alpha-amylase {Pseudoalteromonas halopla | 84.67 | |
| d1lwha2 | 391 | 4-alpha-glucanotransferase {Thermotoga maritima [T | 83.92 | |
| d1e43a2 | 393 | Bacterial alpha-amylase {Chimera (Bacillus amyloli | 83.6 | |
| d1jaea2 | 378 | Animal alpha-amylase {Yellow mealworm (Tenebrio mo | 83.18 | |
| d3bmva4 | 406 | Cyclodextrin glycosyltransferase {Thermoanaerobact | 83.1 | |
| d1nkga2 | 171 | Rhamnogalacturonase B, RhgB, C-terminal domain {As | 82.71 | |
| d1ea9c3 | 382 | Maltogenic amylase, central domain {Bacillus sp., | 81.93 | |
| d1j0ha3 | 382 | Neopullulanase, central domain {Bacillus stearothe | 81.37 |
| >d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Glycosyl hydrolases family 35 catalytic domain domain: Beta-galactosidase LacA, N-terminal domain species: Penicillium sp. [TaxId: 5081]
Probab=100.00 E-value=2.5e-65 Score=549.74 Aligned_cols=292 Identities=30% Similarity=0.460 Sum_probs=248.8
Q ss_pred cceecccCCCC-cccHHHHHHHHHHCCCCEEEEcccCCccCCcCCeeeeccchhHHHHHHHHHHcCcEEEeecCceeccc
Q 005690 2 GSFYFSFFFIW-LQMWPDLIQKAKDGGLDVIQTYVFWNGHEPTQGNYYFQDRYDLVRFIKLVQQAGLYVHLRIGPYVCAE 80 (683)
Q Consensus 2 ~e~~~~~~r~~-~~~W~d~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~dF~G~~dl~~fl~~a~~~GL~VilrpGPyi~aE 80 (683)
||+| |||.+ |++|+|+|++||++|+|+|++||||+.|||+||+|||+|.+||++||++|+|+||+||||||||+|+|
T Consensus 25 ~~~h--~~r~~~~~~w~~~l~~mk~~G~n~vr~~~~W~~~ep~~g~~df~~~~~l~~~l~~a~~~Gl~vil~~g~~~~~~ 102 (354)
T d1tg7a5 25 GEVH--PYRLPVASLYIDIFEKVKALGFNCVSFYVDWALLEGNPGHYSAEGIFDLQPFFDAAKEAGIYLLARPGPYINAE 102 (354)
T ss_dssp EECC--GGGSCCGGGHHHHHHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHHHHHHHHTCEEEEECCSCCCTT
T ss_pred EecC--CCCCCCHHHHHHHHHHHHHcCCCEEEEecchhccCCCCCcccccchhhHHHHHHHHHHcCCEEEEcCCCCcCcc
Confidence 6777 77875 79999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCccccccCCeEeecCChhhHHHHHHHHHHHHHHHhhcccccccCCceEeccccccCCCccc-cCCCCcHHHHHH
Q 005690 81 WNYGGFPVWLKYVPGIEFRTDNGPFKAAMHKFTEKIVSMMKAEKLFQTQGGPIILSQIENEFGPVEW-DIGAPGKAYAKW 159 (683)
Q Consensus 81 w~~GG~P~WL~~~p~~~~Rt~~~~y~~~~~~~~~~l~~~l~~~~~~~~~gGpII~~QiENEyg~~~~-~~~~~~~~y~~~ 159 (683)
|.+||+|.|+...+.. +|+++|.|++++++|+++|+++++ +++++|+|||||+|||||||.+.. ..+.++++|++|
T Consensus 103 w~~~~~p~~~~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~n~~~ii~wqi~NE~g~~~~~~~~~~~~~~~~~ 179 (354)
T d1tg7a5 103 VSGGGFPGWLQRVDGI-LRTSDEAYLKATDNYASNIAATIA--KAQITNGGPIILYQPENEYSGACCGYNGFPDGSYMQY 179 (354)
T ss_dssp BGGGGCCGGGGGCSSC-TTSSCHHHHHHHHHHHHHHHHHHH--HTBGGGTSSEEEECCSSCCCCBCTTCCCCSCHHHHHH
T ss_pred cccCCCCcccccCCCc-ccCCCHHHHHHHHHHHHHHHHHHH--HHHhccCCCceEEEeccccCccccccccchHHHHHHH
Confidence 9999999999987764 899999999999999999999999 778899999999999999997643 234578999999
Q ss_pred HHHHHhhCCCCcceeeecCCCC----CCccccCC---------CCccccc----------------cCCCCCCCCceeee
Q 005690 160 AAQMAVGLNTGVPWVMCKQDDA----PDPVINTC---------NGFYCEK----------------FVPNQNYKPKMWTE 210 (683)
Q Consensus 160 l~~~~~~~g~~vp~~~~~~~~~----~~~~~~t~---------~g~~~~~----------------~~~~~p~~P~~~~E 210 (683)
|++++++.++++|+++++.+.. +..++..+ ..+.|.. +...+|.+|.+++|
T Consensus 180 l~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~d~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~~~E 259 (354)
T d1tg7a5 180 IEDHARDAGIVVPFISNDAWAAGHNAPGTGAGAVDIYGHDSYPLGFDCANPSTWPSGNLPTYFHTSHEQQSPSTPYSLVE 259 (354)
T ss_dssp HHHHHHHTTCCSCBBCCBSSSSCTTCTTSCTTCCSBCEEEECTTCSCCSCTTCCCTTCSCCCHHHHHHHHCTTSCCEEEE
T ss_pred HHhhhhccCcccceEeccchhhccCCCCcccccccccccccCCCccccCCcccccccccchHHHHHHhhcCCccceeeec
Confidence 9999999999999999876421 11111111 1112211 11236899999999
Q ss_pred ccccccCccCCCCCCCChHHHHHHHHH-----HHHcCCeeeeeeeeccCCCCCCCCCCCcccccCCCCCcCccCCCCchh
Q 005690 211 AWTGWFTEFGSAVPTRPAEDLVFSVAR-----FIQSGGSFINYYMYHGGTNFGRTSGGFVATSYDYDAPIDEYGLLNEPK 285 (683)
Q Consensus 211 ~~~Gwf~~wG~~~~~~~~~~~~~~~~~-----~l~~g~s~~n~YM~hGGTNfG~~~g~~~~tSYDy~Apl~E~G~~~t~K 285 (683)
||+||+++||++...+++++++..+.+ .++.|++.+||||||||||||++++...+|||||+|||+|+|+++.++
T Consensus 260 ~~~g~~~~wG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~YM~~GGTnfG~~~~~~~~tsYdy~api~e~G~~~~~y 339 (354)
T d1tg7a5 260 FQGGAFDPWGGVGFAKCAALLNHEFERVFYKNDFSFGVAFLNLYMIFGGTNWGNLGHPGGYTSYDYGSAISESRNITREK 339 (354)
T ss_dssp EESSCCCCTTCCCHHHHHHHTSHHHHHHHHHHHHTTTCSEEEEECSBCCBCCTTCBCTTSCSBCCTTCSBCTTCCCCSHH
T ss_pred cccccccccCCCccccCHHHHHHHHHHHHHhhhhhccccceEEeEEecccCCCCCCCCCCCCCCCCCCeECcCCCCCHHH
Confidence 999999999998776666555444433 356788889999999999999999989999999999999999996567
Q ss_pred HHHHHHHHHHHHh
Q 005690 286 WGHLRDLHKAIKL 298 (683)
Q Consensus 286 y~~lr~l~~~~~~ 298 (683)
|.++|.|+++++.
T Consensus 340 y~~~k~l~~~~~~ 352 (354)
T d1tg7a5 340 YSELKLLGNFAKV 352 (354)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcc
Confidence 7889999999874
|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1tg7a3 b.18.1.27 (A:849-1011) Beta-galactosidase LacA, domains 4 and 5 {Penicillium sp. [TaxId: 5081]} | Back information, alignment and structure |
|---|
| >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} | Back information, alignment and structure |
|---|
| >d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
| >d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
| >d1tg7a2 b.18.1.27 (A:667-848) Beta-galactosidase LacA, domains 4 and 5 {Penicillium sp. [TaxId: 5081]} | Back information, alignment and structure |
|---|
| >d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
| >d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
| >d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} | Back information, alignment and structure |
|---|
| >d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} | Back information, alignment and structure |
|---|
| >d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} | Back information, alignment and structure |
|---|
| >d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} | Back information, alignment and structure |
|---|
| >d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
| >d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} | Back information, alignment and structure |
|---|
| >d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
|---|
| >d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
| >d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} | Back information, alignment and structure |
|---|
| >d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} | Back information, alignment and structure |
|---|
| >d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} | Back information, alignment and structure |
|---|
| >d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} | Back information, alignment and structure |
|---|
| >d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
| >d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
| >d1ta3b_ c.1.8.3 (B:) Xylanase A, catalytic core {Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]} | Back information, alignment and structure |
|---|
| >d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
| >d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} | Back information, alignment and structure |
|---|
| >d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} | Back information, alignment and structure |
|---|
| >d1b1ya_ c.1.8.1 (A:) beta-Amylase {Barley (Hordeum vulgare) [TaxId: 4513]} | Back information, alignment and structure |
|---|
| >d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1fa2a_ c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
| >d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} | Back information, alignment and structure |
|---|
| >d1bhga2 b.18.1.5 (A:22-225) beta-Glucuronidase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1jz8a3 b.18.1.5 (A:13-219) beta-Galactosidase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} | Back information, alignment and structure |
|---|
| >d1ur1a_ c.1.8.3 (A:) Xylanase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
| >d1i1wa_ c.1.8.3 (A:) Xylanase A, catalytic core {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
|---|
| >d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} | Back information, alignment and structure |
|---|
| >d2vzsa4 b.18.1.5 (A:42-225) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
| >d1yq2a3 b.18.1.5 (A:4-219) beta-Galactosidase {Arthrobacter sp. c2-2 [TaxId: 192168]} | Back information, alignment and structure |
|---|
| >d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1wdpa1 c.1.8.1 (A:6-495) beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
| >d1vffa1 c.1.8.4 (A:1-423) Beta-glucosidase A {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
| >d2j78a1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d2je8a4 b.18.1.5 (A:28-219) Beta-mannosidase {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
| >d1gnxa_ c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
| >d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]} | Back information, alignment and structure |
|---|
| >d1r85a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1nofa2 c.1.8.3 (A:44-320) Glycosyl hydrolase family 5 xylanase, catalytic domain {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
| >d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} | Back information, alignment and structure |
|---|
| >d1cbga_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Creeping white clover (Trifolium repens) [TaxId: 3899]} | Back information, alignment and structure |
|---|
| >d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
| >d1wcga1 c.1.8.4 (A:3-464) Thioglucosidase {Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]} | Back information, alignment and structure |
|---|
| >d2vzsa4 b.18.1.5 (A:42-225) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
| >d1v02a_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Sorghum bicolor [TaxId: 4558]} | Back information, alignment and structure |
|---|
| >d1tg7a2 b.18.1.27 (A:667-848) Beta-galactosidase LacA, domains 4 and 5 {Penicillium sp. [TaxId: 5081]} | Back information, alignment and structure |
|---|
| >d1pbga_ c.1.8.4 (A:) 6-phospho-beta-D-galactosidase, PGAL {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
| >d1e4mm_ c.1.8.4 (M:) Plant beta-glucosidase (myrosinase) {White mustard (Sinapis alba) [TaxId: 3728]} | Back information, alignment and structure |
|---|
| >d1w32a_ c.1.8.3 (A:) Xylanase A, catalytic core {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
| >d1yq2a3 b.18.1.5 (A:4-219) beta-Galactosidase {Arthrobacter sp. c2-2 [TaxId: 192168]} | Back information, alignment and structure |
|---|
| >d1bhga2 b.18.1.5 (A:22-225) beta-Glucuronidase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1jz8a3 b.18.1.5 (A:13-219) beta-Galactosidase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1uwsa_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
| >d2je8a4 b.18.1.5 (A:28-219) Beta-mannosidase {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
| >d1qvba_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Thermosphaera aggregans [TaxId: 54254]} | Back information, alignment and structure |
|---|
| >d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} | Back information, alignment and structure |
|---|
| >d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} | Back information, alignment and structure |
|---|
| >d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} | Back information, alignment and structure |
|---|
| >d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} | Back information, alignment and structure |
|---|
| >d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} | Back information, alignment and structure |
|---|
| >d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} | Back information, alignment and structure |
|---|
| >d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} | Back information, alignment and structure |
|---|
| >d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} | Back information, alignment and structure |
|---|
| >d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
| >d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} | Back information, alignment and structure |
|---|
| >d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} | Back information, alignment and structure |
|---|
| >d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} | Back information, alignment and structure |
|---|
| >d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} | Back information, alignment and structure |
|---|
| >d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} | Back information, alignment and structure |
|---|
| >d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} | Back information, alignment and structure |
|---|
| >d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} | Back information, alignment and structure |
|---|
| >d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} | Back information, alignment and structure |
|---|
| >d1nkga2 b.18.1.25 (A:338-508) Rhamnogalacturonase B, RhgB, C-terminal domain {Aspergillus aculeatus [TaxId: 5053]} | Back information, alignment and structure |
|---|
| >d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} | Back information, alignment and structure |
|---|
| >d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|